ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd24k23 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF033097.1|AF033097 Avena sativa nonphototropic hypocotyl 1 (NPH1-2) mRNA, complete cds Length = 3422 Score = 773 bits (390), Expect = 0.0 Identities = 472/498 (94%), Gaps = 1/498 (0%) Strand = Plus / Plus Query: 16 actttgatttgtgcttgcctgacatcttgcagaccgcaggtctttcttccagaagaagct 75 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2550 actttgatttgt-cttgcctgacatcttgcagaccgcaggtctttcttccagaagaagct 2608 Query: 76 aataagaaaagtaggaggaaaagcaggagttcacccatattttttgcggaaccgatgcga 135 |||||||||||||||||||||||||||||||||||| |||||||||| ||||| |||||| Sbjct: 2609 aataagaaaagtaggaggaaaagcaggagttcacccgtattttttgctgaacctatgcga 2668 Query: 136 gcatccaattcatttgttggtacagaagagtacattgcacctgagattattaccggagct 195 |||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||| Sbjct: 2669 gcatccaattcatttgttggtacagaggagtacattgcacctgagatcattactggagct 2728 Query: 196 ggccatacaagtgctgttgattggtgggcgctagggattcttctgtatgaaatgctgtat 255 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 2729 ggccatacaagtgctgttgattggtgggcgctagggattcttctgtatgaaatgttgtat 2788 Query: 256 ggttacacacccttcagaggtaaaaccaggcaaaggacatttgccaacatcctacacaag 315 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 2789 ggttacacacccttcagaggtaaaaccaggcaaaggacattcgccaacatcctacacaag 2848 Query: 316 gacatcagattccccgcaagtatatcggtgagcctcccagctaggcagctgatctacagg 375 ||||||||||| ||||| ||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 2849 gacatcagatttcccgcgagtatatcggtgagcctcccagcaaggcagctgatatacagg 2908 Query: 376 ttgctgcacagggatcccgcgaatagaatgggatcgtatgaggggtcgaacgagataaaa 435 |||| ||||||||||| ||||||| |||||||||||||||| || |||||||||||| Sbjct: 2909 ctgctacacagggatccttcgaataggctgggatcgtatgagggatcaaacgagataaaa 2968 Query: 436 caacacccgttcttccgcggcatcaactgggctcttgtgcgcggcacggctcctccgaag 495 | ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 2969 gagcacccattcttccgcggcatcaactgggctcttgtgcgcggcacggctcctcccaag 3028 Query: 496 ctggacgctccactgttt 513 ||||| |||||||||||| Sbjct: 3029 ctggatgctccactgttt 3046
>gb|AF033096.1|AF033096 Avena sativa nonphototropic hypocotyl 1 (NPH1-1) mRNA, complete cds Length = 3467 Score = 763 bits (385), Expect = 0.0 Identities = 527/573 (91%), Gaps = 1/573 (0%) Strand = Plus / Plus Query: 16 actttgatttgtgcttgcctgacatcttgcagaccgcaggtctttcttccagaagaagct 75 |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 2613 actttgatttgt-cttgtctgacatcttgcagaccgcaggtctttcttccagaagaagct 2671 Query: 76 aataagaaaagtaggaggaaaagcaggagttcacccatattttttgcggaaccgatgcga 135 ||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 2672 aataagaaaagtaggaggaaaagcaggagttcacccatattttttgctgaacctatgcga 2731 Query: 136 gcatccaattcatttgttggtacagaagagtacattgcacctgagattattaccggagct 195 |||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||| Sbjct: 2732 gcatccaattcatttgttggtacagaggagtacattgcacctgagatcattactggagct 2791 Query: 196 ggccatacaagtgctgttgattggtgggcgctagggattcttctgtatgaaatgctgtat 255 |||||||||||||||||||||||||||||||||||||| || |||||||||||| ||||| Sbjct: 2792 ggccatacaagtgctgttgattggtgggcgctagggatcctcctgtatgaaatgttgtat 2851 Query: 256 ggttacacacccttcagaggtaaaaccaggcaaaggacatttgccaacatcctacacaag 315 |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 2852 ggttacacacccttcagaggtaaaaccaggcagaggacattcgccaacatcctacacaag 2911 Query: 316 gacatcagattccccgcaagtatatcggtgagcctcccagctaggcagctgatctacagg 375 ||||||||||| ||||| ||||||||||||||||||||||| ||||||||||| || ||| Sbjct: 2912 gacatcagatttcccgcgagtatatcggtgagcctcccagcaaggcagctgatatatagg 2971 Query: 376 ttgctgcacagggatcccgcgaatagaatgggatcgtatgaggggtcgaacgagataaaa 435 |||| ||||||||||| ||||||| |||||||||| ||||| || |||||||||||| Sbjct: 2972 ctgctacacagggatccttcgaataggctgggatcgtacgagggatcaaacgagataaaa 3031 Query: 436 caacacccgttcttccgcggcatcaactgggctcttgtgcgcggcacggctcctccgaag 495 ||||||| |||||||||||||||||||||||||| ||||| |||||||||||||| ||| Sbjct: 3032 gaacaccctttcttccgcggcatcaactgggctctcgtgcgtggcacggctcctccaaag 3091 Query: 496 ctggacgctccactgttttccaaggacgtgggcaagggaatgggcgatgctgccgccgcc 555 ||||||||||||||||| | | ||| || ||||||||||||||||||||| || || Sbjct: 3092 ctggacgctccactgttcccggatgacacggacaagggaatgggcgatgctgctgctgct 3151 Query: 556 gataatggcaccgacatgttctgaacgaagaag 588 |||| | ||||||||||||||||| ||||||| Sbjct: 3152 gatactcacaccgacatgttctgaatgaagaag 3184
>dbj|AK066816.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013081N02, full insert sequence Length = 2409 Score = 335 bits (169), Expect = 1e-88 Identities = 326/377 (86%), Gaps = 1/377 (0%) Strand = Plus / Plus Query: 16 actttgatttgtgcttgcctgacatcttgcagaccgcaggtctttcttccagaagaagct 75 |||| ||||||| |||| || ||||||||||||||||||||||||||||| ||||| ||| Sbjct: 1500 acttcgatttgt-cttgtctaacatcttgcagaccgcaggtctttcttcccgaagatgct 1558 Query: 76 aataagaaaagtaggaggaaaagcaggagttcacccatattttttgcggaaccgatgcga 135 || |||||| |||| |||| | |||||| |||||||||||||| ||||| |||||| Sbjct: 1559 gatgagaaaaaagggagaaaaaacgggagttaccccatattttttgctgaacctatgcga 1618 Query: 136 gcatccaattcatttgttggtacagaagagtacattgcacctgagattattaccggagct 195 |||||||||||||||||||| || || ||||||||||| |||||||||||||| |||||| Sbjct: 1619 gcatccaattcatttgttggcacggaggagtacattgcgcctgagattattacaggagct 1678 Query: 196 ggccatacaagtgctgttgattggtgggcgctagggattcttctgtatgaaatgctgtat 255 ||||||||||| ||||||||||||||||| |||||||||||||| ||||||||| ||||| Sbjct: 1679 ggccatacaagcgctgttgattggtgggctctagggattcttctatatgaaatgttgtat 1738 Query: 256 ggttacacacccttcagaggtaaaaccaggcaaaggacatttgccaacatcctacacaag 315 ||||| ||||| || ||||| ||||| |||||| |||||||||| || ||| | |||||| Sbjct: 1739 ggttatacaccttttagaggaaaaacgaggcaacggacatttgctaatatcttgcacaag 1798 Query: 316 gacatcagattccccgcaagtatatcggtgagcctcccagctaggcagctgatctacagg 375 || |||||||| || || ||||||||||| ||||| | || |||||||| || || ||| Sbjct: 1799 gatatcagatttcctgctagtatatcggtcagcctagcggcgaggcagctaatgtatagg 1858 Query: 376 ttgctgcacagggatcc 392 ||||| || |||||||| Sbjct: 1859 ttgctacatagggatcc 1875
>dbj|AK065596.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013026O13, full insert sequence Length = 3472 Score = 335 bits (169), Expect = 1e-88 Identities = 326/377 (86%), Gaps = 1/377 (0%) Strand = Plus / Plus Query: 16 actttgatttgtgcttgcctgacatcttgcagaccgcaggtctttcttccagaagaagct 75 |||| ||||||| |||| || ||||||||||||||||||||||||||||| ||||| ||| Sbjct: 2563 acttcgatttgt-cttgtctaacatcttgcagaccgcaggtctttcttcccgaagatgct 2621 Query: 76 aataagaaaagtaggaggaaaagcaggagttcacccatattttttgcggaaccgatgcga 135 || |||||| |||| |||| | |||||| |||||||||||||| ||||| |||||| Sbjct: 2622 gatgagaaaaaagggagaaaaaacgggagttaccccatattttttgctgaacctatgcga 2681 Query: 136 gcatccaattcatttgttggtacagaagagtacattgcacctgagattattaccggagct 195 |||||||||||||||||||| || || ||||||||||| |||||||||||||| |||||| Sbjct: 2682 gcatccaattcatttgttggcacggaggagtacattgcgcctgagattattacaggagct 2741 Query: 196 ggccatacaagtgctgttgattggtgggcgctagggattcttctgtatgaaatgctgtat 255 ||||||||||| ||||||||||||||||| |||||||||||||| ||||||||| ||||| Sbjct: 2742 ggccatacaagcgctgttgattggtgggctctagggattcttctatatgaaatgttgtat 2801 Query: 256 ggttacacacccttcagaggtaaaaccaggcaaaggacatttgccaacatcctacacaag 315 ||||| ||||| || ||||| ||||| |||||| |||||||||| || ||| | |||||| Sbjct: 2802 ggttatacaccttttagaggaaaaacgaggcaacggacatttgctaatatcttgcacaag 2861 Query: 316 gacatcagattccccgcaagtatatcggtgagcctcccagctaggcagctgatctacagg 375 || |||||||| || || ||||||||||| ||||| | || |||||||| || || ||| Sbjct: 2862 gatatcagatttcctgctagtatatcggtcagcctagcggcgaggcagctaatgtatagg 2921 Query: 376 ttgctgcacagggatcc 392 ||||| || |||||||| Sbjct: 2922 ttgctacatagggatcc 2938
>dbj|AB018444.1| Oryza sativa (japonica cultivar-group) mRNA for nonphototrophic hypocotyl 1a, complete cds Length = 3381 Score = 335 bits (169), Expect = 1e-88 Identities = 326/377 (86%), Gaps = 1/377 (0%) Strand = Plus / Plus Query: 16 actttgatttgtgcttgcctgacatcttgcagaccgcaggtctttcttccagaagaagct 75 |||| ||||||| |||| || ||||||||||||||||||||||||||||| ||||| ||| Sbjct: 2466 acttcgatttgt-cttgtctaacatcttgcagaccgcaggtctttcttcccgaagatgct 2524 Query: 76 aataagaaaagtaggaggaaaagcaggagttcacccatattttttgcggaaccgatgcga 135 || |||||| |||| |||| | |||||| |||||||||||||| ||||| |||||| Sbjct: 2525 gatgagaaaaaagggagaaaaaacgggagttaccccatattttttgctgaacctatgcga 2584 Query: 136 gcatccaattcatttgttggtacagaagagtacattgcacctgagattattaccggagct 195 |||||||||||||||||||| || || ||||||||||| |||||||||||||| |||||| Sbjct: 2585 gcatccaattcatttgttggcacggaggagtacattgcgcctgagattattacaggagct 2644 Query: 196 ggccatacaagtgctgttgattggtgggcgctagggattcttctgtatgaaatgctgtat 255 ||||||||||| ||||||||||||||||| |||||||||||||| ||||||||| ||||| Sbjct: 2645 ggccatacaagcgctgttgattggtgggctctagggattcttctatatgaaatgttgtat 2704 Query: 256 ggttacacacccttcagaggtaaaaccaggcaaaggacatttgccaacatcctacacaag 315 ||||| ||||| || ||||| ||||| |||||| |||||||||| || ||| | |||||| Sbjct: 2705 ggttatacaccttttagaggaaaaacgaggcaacggacatttgctaatatcttgcacaag 2764 Query: 316 gacatcagattccccgcaagtatatcggtgagcctcccagctaggcagctgatctacagg 375 || |||||||| || || ||||||||||| ||||| | || |||||||| || || ||| Sbjct: 2765 gatatcagatttcctgctagtatatcggtcagcctagcggcgaggcagctaatgtatagg 2824 Query: 376 ttgctgcacagggatcc 392 ||||| || |||||||| Sbjct: 2825 ttgctacatagggatcc 2841
>emb|AJ252142.1|OSA252142 Oryza sativa mRNA for non-phototropic hypocotyl NPH1 (nph1 gene) Length = 3283 Score = 313 bits (158), Expect = 4e-82 Identities = 321/374 (85%), Gaps = 1/374 (0%) Strand = Plus / Plus Query: 16 actttgatttgtgcttgcctgacatcttgcagaccgcaggtctttcttccagaagaagct 75 |||| ||||||| |||| || ||||||||||||||||||||||||||||| ||||| ||| Sbjct: 2390 acttcgatttgt-cttgtctaacatcttgcagaccgcaggtctttcttcccgaagatgct 2448 Query: 76 aataagaaaagtaggaggaaaagcaggagttcacccatattttttgcggaaccgatgcga 135 || |||||| |||| |||| |||||||| |||||||||||||| ||||| |||||| Sbjct: 2449 gatgagaaaaaagggagaaaaaacaggagttaccccatattttttgctgaacctatgcga 2508 Query: 136 gcatccaattcatttgttggtacagaagagtacattgcacctgagattattaccggagct 195 |||||||||||||||||||| || || ||||||||||| || ||||||||||| |||||| Sbjct: 2509 gcatccaattcatttgttggcacggaggagtacattgcgcccgagattattacaggagct 2568 Query: 196 ggccatacaagtgctgttgattggtgggcgctagggattcttctgtatgaaatgctgtat 255 ||||||||||| ||||||||||||||||| |||||||||||||| ||||||||| ||||| Sbjct: 2569 ggccatacaagcgctgttgattggtgggctctagggattcttctatatgaaatgttgtat 2628 Query: 256 ggttacacacccttcagaggtaaaaccaggcaaaggacatttgccaacatcctacacaag 315 ||||| ||||| || ||||| ||||| |||||| |||||||||| || ||| | |||||| Sbjct: 2629 ggttatacaccttttagaggaaaaacgaggcaacggacatttgctaatatcttgcacaag 2688 Query: 316 gacatcagattccccgcaagtatatcggtgagcctcccagctaggcagctgatctacagg 375 || || ||||| || || ||||||| ||| ||||| | || |||||||| || || ||| Sbjct: 2689 gatattagatttcctgctagtatattggtcagcctagcggcgaggcagctaatgtatagg 2748 Query: 376 ttgctgcacaggga 389 ||||| || ||||| Sbjct: 2749 ttgctacataggga 2762
>gb|AF033263.1|AF033263 Zea mays nonphototropic hypocotyl 1 (nph1) mRNA, complete cds Length = 3330 Score = 293 bits (148), Expect = 4e-76 Identities = 331/392 (84%) Strand = Plus / Plus Query: 79 aagaaaagtaggaggaaaagcaggagttcacccatattttttgcggaaccgatgcgagca 138 ||||||| |||||||| ||||||||| |||||||||||||| ||||| ||||||||| Sbjct: 2653 aagaaaaagaggaggaagagcaggagtaatcccatattttttgctgaaccaatgcgagca 2712 Query: 139 tccaattcatttgttggtacagaagagtacattgcacctgagattattaccggagctggc 198 || ||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 2713 tcaaattcttttgttggtacagaggagtacattgcaccggagattattaccggagctggc 2772 Query: 199 catacaagtgctgttgattggtgggcgctagggattcttctgtatgaaatgctgtatggt 258 ||||| |||||||| ||||||||||||||||| |||||||| ||||| ||| | |||||| Sbjct: 2773 catacgagtgctgtagattggtgggcgctaggaattcttctatatgagatgttatatggt 2832 Query: 259 tacacacccttcagaggtaaaaccaggcaaaggacatttgccaacatcctacacaaggac 318 || |||||||||||||| ||||| || |||||||||||||| || || || |||||||| Sbjct: 2833 tatacacccttcagagggaaaacaagacaaaggacatttgctaatattctgcacaaggat 2892 Query: 319 atcagattccccgcaagtatatcggtgagcctcccagctaggcagctgatctacaggttg 378 |||||||| || || || ||| ||||||||| | || ||||||||||| ||| ||||| Sbjct: 2893 atcagatttcctgcgagcatacaggtgagcctggcggcaaggcagctgatataccggttg 2952 Query: 379 ctgcacagggatcccgcgaatagaatgggatcgtatgaggggtcgaacgagataaaacaa 438 || ||| | || || || ||||| | || || |||||||| | | ||||| |||||| Sbjct: 2953 ctacaccgagaccctgcaaataggctaggttcctatgagggcgctatggagatcaaacaa 3012 Query: 439 cacccgttcttccgcggcatcaactgggctct 470 ||||| ||||| || ||||| ||||||||||| Sbjct: 3013 caccccttctttcgtggcataaactgggctct 3044
>dbj|AK065447.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013020G01, full insert sequence Length = 2985 Score = 276 bits (139), Expect = 9e-71 Identities = 239/271 (88%), Gaps = 1/271 (0%) Strand = Plus / Plus Query: 16 actttgatttgtgcttgcctgacatcttgcagaccgcaggtctttcttccagaagaagct 75 |||| ||||||| |||| || ||||||||||||||||||||||||||||| ||||| ||| Sbjct: 2392 acttcgatttgt-cttgtctaacatcttgcagaccgcaggtctttcttcccgaagatgct 2450 Query: 76 aataagaaaagtaggaggaaaagcaggagttcacccatattttttgcggaaccgatgcga 135 || |||||| |||| |||| | |||||| |||||||||||||| ||||| |||||| Sbjct: 2451 gatgagaaaaaagggagaaaaaacgggagttaccccatattttttgctgaacctatgcga 2510 Query: 136 gcatccaattcatttgttggtacagaagagtacattgcacctgagattattaccggagct 195 |||||||||||||||||||| || || ||||||||||| |||||||||||||| |||||| Sbjct: 2511 gcatccaattcatttgttggcacggaggagtacattgcgcctgagattattacaggagct 2570 Query: 196 ggccatacaagtgctgttgattggtgggcgctagggattcttctgtatgaaatgctgtat 255 ||||||||||| ||||||||||||||||| |||||||||||||| ||||||||| ||||| Sbjct: 2571 ggccatacaagcgctgttgattggtgggctctagggattcttctatatgaaatgttgtat 2630 Query: 256 ggttacacacccttcagaggtaaaaccaggc 286 ||||| ||||| || ||||| ||||| |||| Sbjct: 2631 ggttatacaccttttagaggaaaaacgaggc 2661
>gb|AY109754.1| Zea mays CL1834_1 mRNA sequence Length = 3290 Score = 182 bits (92), Expect = 1e-42 Identities = 131/144 (90%) Strand = Plus / Plus Query: 124 gaaccgatgcgagcatccaattcatttgttggtacagaagagtacattgcacctgagatt 183 ||||| ||||||||||| ||||| |||||||||||||| |||||||||||||| |||||| Sbjct: 2698 gaaccaatgcgagcatcaaattcttttgttggtacagaggagtacattgcaccggagatt 2757 Query: 184 attaccggagctggccatacaagtgctgttgattggtgggcgctagggattcttctgtat 243 |||||||||||||||||||| |||||||| ||||||||||||||||| |||||||| ||| Sbjct: 2758 attaccggagctggccatacgagtgctgtagattggtgggcgctaggaattcttctatat 2817 Query: 244 gaaatgctgtatggttacacaccc 267 || ||| | |||||||| |||||| Sbjct: 2818 gagatgttatatggttatacaccc 2841 Score = 50.1 bits (25), Expect = 0.010 Identities = 127/161 (78%) Strand = Plus / Plus Query: 310 cacaaggacatcagattccccgcaagtatatcggtgagcctcccagctaggcagctgatc 369 |||||||| |||||||| || || || ||| ||||||||| | || ||||||||||| Sbjct: 2884 cacaaggatatcagatttcctgcgagcatacaggtgagcctggcggcaaggcagctgata 2943 Query: 370 tacaggttgctgcacagggatcccgcgaatagaatgggatcgtatgaggggtcgaacgag 429 ||| ||||||| ||| | || || || ||||| | || || |||||||| | | ||| Sbjct: 2944 taccggttgctacaccgagaccctgcaaataggctaggttcctatgagggcgctatggag 3003 Query: 430 ataaaacaacacccgttcttccgcggcatcaactgggctct 470 || ||||||||||| ||||| || ||||| ||||||||||| Sbjct: 3004 atcaaacaacaccccttctttcgtggcataaactgggctct 3044
>gb|U83281.2|PSU83281 Pisum sativum phototropin-like protein PsPK4 mRNA, complete cds Length = 3419 Score = 125 bits (63), Expect = 2e-25 Identities = 159/191 (83%) Strand = Plus / Plus Query: 124 gaaccgatgcgagcatccaattcatttgttggtacagaagagtacattgcacctgagatt 183 ||||| ||| ||||||||||||| |||||||| || ||||||||||| || || || ||| Sbjct: 2683 gaaccaatgagagcatccaattcttttgttggcacggaagagtacatagctccggaaatt 2742 Query: 184 attaccggagctggccatacaagtgctgttgattggtgggcgctagggattcttctgtat 243 || || || | || ||||| |||||||| ||||||||||| ||||| |||||||| ||| Sbjct: 2743 ataactggttcaggtcatactagtgctgtagattggtgggctctaggtattcttctatat 2802 Query: 244 gaaatgctgtatggttacacacccttcagaggtaaaaccaggcaaaggacatttgccaac 303 |||||||| ||||| || ||||| |||||||| || || || |||| ||||||||| ||| Sbjct: 2803 gaaatgctttatggatatacaccattcagaggaaagacaagacaaaagacatttgcaaac 2862 Query: 304 atcctacacaa 314 || || ||||| Sbjct: 2863 attcttcacaa 2873
>gb|M92989.1|PEAPK5A Pea protein kinase (PK5) mRNA, complete cds Length = 1813 Score = 123 bits (62), Expect = 8e-25 Identities = 161/194 (82%) Strand = Plus / Plus Query: 124 gaaccgatgcgagcatccaattcatttgttggtacagaagagtacattgcacctgagatt 183 ||||| ||||| ||||| ||||| |||||||| |||||||||||||| || || || ||| Sbjct: 1096 gaaccaatgcgggcatcgaattcttttgttggcacagaagagtacatagctccggaaatt 1155 Query: 184 attaccggagctggccatacaagtgctgttgattggtgggcgctagggattcttctgtat 243 || || || | |||||||| |||||||| ||||||||||| ||||| |||||||||||| Sbjct: 1156 ataacaggttcaggccatactagtgctgtggattggtgggctctaggaattcttctgtat 1215 Query: 244 gaaatgctgtatggttacacacccttcagaggtaaaaccaggcaaaggacatttgccaac 303 |||||| | ||||| || ||||| ||||| || || | | ||||||| |||||||| || Sbjct: 1216 gaaatgttttatggatatacaccattcaggggaaagaaccggcaaagaacatttgcgaat 1275 Query: 304 atcctacacaagga 317 || || |||||||| Sbjct: 1276 attctccacaagga 1289
>dbj|AB095910.1| Vicia faba Vfphot1b mRNA for phototropin, complete cds Length = 3137 Score = 117 bits (59), Expect = 5e-23 Identities = 146/175 (83%) Strand = Plus / Plus Query: 124 gaaccgatgcgagcatccaattcatttgttggtacagaagagtacattgcacctgagatt 183 ||||| ||| |||| |||||||| |||||||| |||||||||||||| || || || ||| Sbjct: 2487 gaaccaatgagagcgtccaattcttttgttggcacagaagagtacatagctccggaaatt 2546 Query: 184 attaccggagctggccatacaagtgctgttgattggtgggcgctagggattcttctgtat 243 || || || | || ||||| |||||||| ||||||||||| ||||| |||||||| ||| Sbjct: 2547 ataacaggttcaggtcatactagtgctgtggattggtgggctctaggtattcttctatat 2606 Query: 244 gaaatgctgtatggttacacacccttcagaggtaaaaccaggcaaaggacatttg 298 |||||||| ||||| || ||||| |||||||| || || || |||| |||||||| Sbjct: 2607 gaaatgctttatggatatacaccattcagaggaaagacaagacaaaagacatttg 2661
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 107 bits (54), Expect = 5e-20 Identities = 108/126 (85%) Strand = Plus / Plus Query: 53 aggtctttcttccagaagaagctaataagaaaagtaggaggaaaagcaggagttcaccca 112 ||||||||||||| ||||| ||| || |||||| |||| |||| | |||||| |||| Sbjct: 87601 aggtctttcttcccgaagatgctgatgagaaaaaagggagaaaaaacgggagttacccca 87660 Query: 113 tattttttgcggaaccgatgcgagcatccaattcatttgttggtacagaagagtacattg 172 |||||||||| ||||| |||||||||||||||||||||||||| || || |||||||||| Sbjct: 87661 tattttttgctgaacctatgcgagcatccaattcatttgttggcacggaggagtacattg 87720 Query: 173 cacctg 178 | |||| Sbjct: 87721 cgcctg 87726 Score = 105 bits (53), Expect = 2e-19 Identities = 101/117 (86%) Strand = Plus / Plus Query: 228 agggattcttctgtatgaaatgctgtatggttacacacccttcagaggtaaaaccaggca 287 |||||||||||| ||||||||| |||||||||| ||||| || ||||| ||||| ||||| Sbjct: 88088 agggattcttctatatgaaatgttgtatggttatacaccttttagaggaaaaacgaggca 88147 Query: 288 aaggacatttgccaacatcctacacaaggacatcagattccccgcaagtatatcggt 344 | |||||||||| || ||| | |||||||| |||||||| || || ||||||||||| Sbjct: 88148 acggacatttgctaatatcttgcacaaggatatcagatttcctgctagtatatcggt 88204 Score = 81.8 bits (41), Expect = 3e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 178 gagattattaccggagctggccatacaagtgctgttgattggtgggcgctagg 230 ||||||||||| ||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 87838 gagattattacaggagctggccatacaagcgctgttgattggtgggctctagg 87890 Score = 42.1 bits (21), Expect = 2.4 Identities = 37/41 (90%), Gaps = 1/41 (2%) Strand = Plus / Plus Query: 16 actttgatttgtgcttgcctgacatcttgcagaccgcaggt 56 |||| ||||||| |||| || |||||||||||||||||||| Sbjct: 86694 acttcgatttgt-cttgtctaacatcttgcagaccgcaggt 86733
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 107 bits (54), Expect = 5e-20 Identities = 108/126 (85%) Strand = Plus / Plus Query: 53 aggtctttcttccagaagaagctaataagaaaagtaggaggaaaagcaggagttcaccca 112 ||||||||||||| ||||| ||| || |||||| |||| |||| | |||||| |||| Sbjct: 91741 aggtctttcttcccgaagatgctgatgagaaaaaagggagaaaaaacgggagttacccca 91800 Query: 113 tattttttgcggaaccgatgcgagcatccaattcatttgttggtacagaagagtacattg 172 |||||||||| ||||| |||||||||||||||||||||||||| || || |||||||||| Sbjct: 91801 tattttttgctgaacctatgcgagcatccaattcatttgttggcacggaggagtacattg 91860 Query: 173 cacctg 178 | |||| Sbjct: 91861 cgcctg 91866 Score = 105 bits (53), Expect = 2e-19 Identities = 101/117 (86%) Strand = Plus / Plus Query: 228 agggattcttctgtatgaaatgctgtatggttacacacccttcagaggtaaaaccaggca 287 |||||||||||| ||||||||| |||||||||| ||||| || ||||| ||||| ||||| Sbjct: 92228 agggattcttctatatgaaatgttgtatggttatacaccttttagaggaaaaacgaggca 92287 Query: 288 aaggacatttgccaacatcctacacaaggacatcagattccccgcaagtatatcggt 344 | |||||||||| || ||| | |||||||| |||||||| || || ||||||||||| Sbjct: 92288 acggacatttgctaatatcttgcacaaggatatcagatttcctgctagtatatcggt 92344 Score = 81.8 bits (41), Expect = 3e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 178 gagattattaccggagctggccatacaagtgctgttgattggtgggcgctagg 230 ||||||||||| ||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 91978 gagattattacaggagctggccatacaagcgctgttgattggtgggctctagg 92030 Score = 42.1 bits (21), Expect = 2.4 Identities = 37/41 (90%), Gaps = 1/41 (2%) Strand = Plus / Plus Query: 16 actttgatttgtgcttgcctgacatcttgcagaccgcaggt 56 |||| ||||||| |||| || |||||||||||||||||||| Sbjct: 90833 acttcgatttgt-cttgtctaacatcttgcagaccgcaggt 90872
>dbj|AB095909.1| Vicia faba Vfphot1a mRNA for phototropin, complete cds Length = 3230 Score = 107 bits (54), Expect = 5e-20 Identities = 159/194 (81%) Strand = Plus / Plus Query: 124 gaaccgatgcgagcatccaattcatttgttggtacagaagagtacattgcacctgagatt 183 ||||| ||| ||||||| ||||| |||||||| |||||||| ||||| || || || ||| Sbjct: 2519 gaaccaatgagagcatcaaattcttttgttggcacagaagaatacatagctccggaaatt 2578 Query: 184 attaccggagctggccatacaagtgctgttgattggtgggcgctagggattcttctgtat 243 || || || | |||||||| ||||||| ||||||||||| ||||| |||||||||||| Sbjct: 2579 ataactggttcaggccatacttgtgctgtggattggtgggctctaggaattcttctgtat 2638 Query: 244 gaaatgctgtatggttacacacccttcagaggtaaaaccaggcaaaggacatttgccaac 303 |||||| | ||||| || ||||| ||||| || || | |||||||| |||||||| || Sbjct: 2639 gaaatgttttatgggtatacaccattcaggggaaagaataggcaaagaacatttgcgaat 2698 Query: 304 atcctacacaagga 317 || || |||||||| Sbjct: 2699 attctccacaagga 2712
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 107 bits (54), Expect = 5e-20 Identities = 108/126 (85%) Strand = Plus / Plus Query: 53 aggtctttcttccagaagaagctaataagaaaagtaggaggaaaagcaggagttcaccca 112 ||||||||||||| ||||| ||| || |||||| |||| |||| | |||||| |||| Sbjct: 91741 aggtctttcttcccgaagatgctgatgagaaaaaagggagaaaaaacgggagttacccca 91800 Query: 113 tattttttgcggaaccgatgcgagcatccaattcatttgttggtacagaagagtacattg 172 |||||||||| ||||| |||||||||||||||||||||||||| || || |||||||||| Sbjct: 91801 tattttttgctgaacctatgcgagcatccaattcatttgttggcacggaggagtacattg 91860 Query: 173 cacctg 178 | |||| Sbjct: 91861 cgcctg 91866 Score = 105 bits (53), Expect = 2e-19 Identities = 101/117 (86%) Strand = Plus / Plus Query: 228 agggattcttctgtatgaaatgctgtatggttacacacccttcagaggtaaaaccaggca 287 |||||||||||| ||||||||| |||||||||| ||||| || ||||| ||||| ||||| Sbjct: 92228 agggattcttctatatgaaatgttgtatggttatacaccttttagaggaaaaacgaggca 92287 Query: 288 aaggacatttgccaacatcctacacaaggacatcagattccccgcaagtatatcggt 344 | |||||||||| || ||| | |||||||| |||||||| || || ||||||||||| Sbjct: 92288 acggacatttgctaatatcttgcacaaggatatcagatttcctgctagtatatcggt 92344 Score = 81.8 bits (41), Expect = 3e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 178 gagattattaccggagctggccatacaagtgctgttgattggtgggcgctagg 230 ||||||||||| ||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 91978 gagattattacaggagctggccatacaagcgctgttgattggtgggctctagg 92030 Score = 42.1 bits (21), Expect = 2.4 Identities = 37/41 (90%), Gaps = 1/41 (2%) Strand = Plus / Plus Query: 16 actttgatttgtgcttgcctgacatcttgcagaccgcaggt 56 |||| ||||||| |||| || |||||||||||||||||||| Sbjct: 90833 acttcgatttgt-cttgtctaacatcttgcagaccgcaggt 90872
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 107 bits (54), Expect = 5e-20 Identities = 108/126 (85%) Strand = Plus / Plus Query: 53 aggtctttcttccagaagaagctaataagaaaagtaggaggaaaagcaggagttcaccca 112 ||||||||||||| ||||| ||| || |||||| |||| |||| | |||||| |||| Sbjct: 87601 aggtctttcttcccgaagatgctgatgagaaaaaagggagaaaaaacgggagttacccca 87660 Query: 113 tattttttgcggaaccgatgcgagcatccaattcatttgttggtacagaagagtacattg 172 |||||||||| ||||| |||||||||||||||||||||||||| || || |||||||||| Sbjct: 87661 tattttttgctgaacctatgcgagcatccaattcatttgttggcacggaggagtacattg 87720 Query: 173 cacctg 178 | |||| Sbjct: 87721 cgcctg 87726 Score = 105 bits (53), Expect = 2e-19 Identities = 101/117 (86%) Strand = Plus / Plus Query: 228 agggattcttctgtatgaaatgctgtatggttacacacccttcagaggtaaaaccaggca 287 |||||||||||| ||||||||| |||||||||| ||||| || ||||| ||||| ||||| Sbjct: 88088 agggattcttctatatgaaatgttgtatggttatacaccttttagaggaaaaacgaggca 88147 Query: 288 aaggacatttgccaacatcctacacaaggacatcagattccccgcaagtatatcggt 344 | |||||||||| || ||| | |||||||| |||||||| || || ||||||||||| Sbjct: 88148 acggacatttgctaatatcttgcacaaggatatcagatttcctgctagtatatcggt 88204 Score = 81.8 bits (41), Expect = 3e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 178 gagattattaccggagctggccatacaagtgctgttgattggtgggcgctagg 230 ||||||||||| ||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 87838 gagattattacaggagctggccatacaagcgctgttgattggtgggctctagg 87890 Score = 42.1 bits (21), Expect = 2.4 Identities = 37/41 (90%), Gaps = 1/41 (2%) Strand = Plus / Plus Query: 16 actttgatttgtgcttgcctgacatcttgcagaccgcaggt 56 |||| ||||||| |||| || |||||||||||||||||||| Sbjct: 86694 acttcgatttgt-cttgtctaacatcttgcagaccgcaggt 86733
>emb|BX072548.4|CNS09S4R Oryza sativa chromosome 11, . BAC OSJNBa0029D01 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 147503 Score = 107 bits (54), Expect = 5e-20 Identities = 108/126 (85%) Strand = Plus / Plus Query: 53 aggtctttcttccagaagaagctaataagaaaagtaggaggaaaagcaggagttcaccca 112 ||||||||||||| ||||| ||| || |||||| |||| |||| | |||||| |||| Sbjct: 91741 aggtctttcttcccgaagatgctgatgagaaaaaagggagaaaaaacgggagttacccca 91800 Query: 113 tattttttgcggaaccgatgcgagcatccaattcatttgttggtacagaagagtacattg 172 |||||||||| ||||| |||||||||||||||||||||||||| || || |||||||||| Sbjct: 91801 tattttttgctgaacctatgcgagcatccaattcatttgttggcacggaggagtacattg 91860 Query: 173 cacctg 178 | |||| Sbjct: 91861 cgcctg 91866 Score = 105 bits (53), Expect = 2e-19 Identities = 101/117 (86%) Strand = Plus / Plus Query: 228 agggattcttctgtatgaaatgctgtatggttacacacccttcagaggtaaaaccaggca 287 |||||||||||| ||||||||| |||||||||| ||||| || ||||| ||||| ||||| Sbjct: 92228 agggattcttctatatgaaatgttgtatggttatacaccttttagaggaaaaacgaggca 92287 Query: 288 aaggacatttgccaacatcctacacaaggacatcagattccccgcaagtatatcggt 344 | |||||||||| || ||| | |||||||| |||||||| || || ||||||||||| Sbjct: 92288 acggacatttgctaatatcttgcacaaggatatcagatttcctgctagtatatcggt 92344 Score = 81.8 bits (41), Expect = 3e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 178 gagattattaccggagctggccatacaagtgctgttgattggtgggcgctagg 230 ||||||||||| ||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 91978 gagattattacaggagctggccatacaagcgctgttgattggtgggctctagg 92030 Score = 42.1 bits (21), Expect = 2.4 Identities = 37/41 (90%), Gaps = 1/41 (2%) Strand = Plus / Plus Query: 16 actttgatttgtgcttgcctgacatcttgcagaccgcaggt 56 |||| ||||||| |||| || |||||||||||||||||||| Sbjct: 90833 acttcgatttgt-cttgtctaacatcttgcagaccgcaggt 90872
>emb|BX000503.2|CNS08CDT Oryza sativa chromosome 12, . BAC OSJNBb0077A02 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131346 Score = 107 bits (54), Expect = 5e-20 Identities = 108/126 (85%) Strand = Plus / Plus Query: 53 aggtctttcttccagaagaagctaataagaaaagtaggaggaaaagcaggagttcaccca 112 ||||||||||||| ||||| ||| || |||||| |||| |||| | |||||| |||| Sbjct: 87601 aggtctttcttcccgaagatgctgatgagaaaaaagggagaaaaaacgggagttacccca 87660 Query: 113 tattttttgcggaaccgatgcgagcatccaattcatttgttggtacagaagagtacattg 172 |||||||||| ||||| |||||||||||||||||||||||||| || || |||||||||| Sbjct: 87661 tattttttgctgaacctatgcgagcatccaattcatttgttggcacggaggagtacattg 87720 Query: 173 cacctg 178 | |||| Sbjct: 87721 cgcctg 87726 Score = 105 bits (53), Expect = 2e-19 Identities = 101/117 (86%) Strand = Plus / Plus Query: 228 agggattcttctgtatgaaatgctgtatggttacacacccttcagaggtaaaaccaggca 287 |||||||||||| ||||||||| |||||||||| ||||| || ||||| ||||| ||||| Sbjct: 88088 agggattcttctatatgaaatgttgtatggttatacaccttttagaggaaaaacgaggca 88147 Query: 288 aaggacatttgccaacatcctacacaaggacatcagattccccgcaagtatatcggt 344 | |||||||||| || ||| | |||||||| |||||||| || || ||||||||||| Sbjct: 88148 acggacatttgctaatatcttgcacaaggatatcagatttcctgctagtatatcggt 88204 Score = 81.8 bits (41), Expect = 3e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 178 gagattattaccggagctggccatacaagtgctgttgattggtgggcgctagg 230 ||||||||||| ||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 87838 gagattattacaggagctggccatacaagcgctgttgattggtgggctctagg 87890 Score = 42.1 bits (21), Expect = 2.4 Identities = 37/41 (90%), Gaps = 1/41 (2%) Strand = Plus / Plus Query: 16 actttgatttgtgcttgcctgacatcttgcagaccgcaggt 56 |||| ||||||| |||| || |||||||||||||||||||| Sbjct: 86694 acttcgatttgt-cttgtctaacatcttgcagaccgcaggt 86733
>emb|BX000496.1|CNS08CDM Oryza sativa chromosome 12, . BAC OSJNBa0096E03 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 161808 Score = 107 bits (54), Expect = 5e-20 Identities = 108/126 (85%) Strand = Plus / Plus Query: 53 aggtctttcttccagaagaagctaataagaaaagtaggaggaaaagcaggagttcaccca 112 ||||||||||||| ||||| ||| || |||||| |||| |||| | |||||| |||| Sbjct: 39210 aggtctttcttcccgaagatgctgatgagaaaaaagggagaaaaaacgggagttacccca 39269 Query: 113 tattttttgcggaaccgatgcgagcatccaattcatttgttggtacagaagagtacattg 172 |||||||||| ||||| |||||||||||||||||||||||||| || || |||||||||| Sbjct: 39270 tattttttgctgaacctatgcgagcatccaattcatttgttggcacggaggagtacattg 39329 Query: 173 cacctg 178 | |||| Sbjct: 39330 cgcctg 39335 Score = 105 bits (53), Expect = 2e-19 Identities = 101/117 (86%) Strand = Plus / Plus Query: 228 agggattcttctgtatgaaatgctgtatggttacacacccttcagaggtaaaaccaggca 287 |||||||||||| ||||||||| |||||||||| ||||| || ||||| ||||| ||||| Sbjct: 39697 agggattcttctatatgaaatgttgtatggttatacaccttttagaggaaaaacgaggca 39756 Query: 288 aaggacatttgccaacatcctacacaaggacatcagattccccgcaagtatatcggt 344 | |||||||||| || ||| | |||||||| |||||||| || || ||||||||||| Sbjct: 39757 acggacatttgctaatatcttgcacaaggatatcagatttcctgctagtatatcggt 39813 Score = 81.8 bits (41), Expect = 3e-12 Identities = 50/53 (94%) Strand = Plus / Plus Query: 178 gagattattaccggagctggccatacaagtgctgttgattggtgggcgctagg 230 ||||||||||| ||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 39447 gagattattacaggagctggccatacaagcgctgttgattggtgggctctagg 39499 Score = 42.1 bits (21), Expect = 2.4 Identities = 37/41 (90%), Gaps = 1/41 (2%) Strand = Plus / Plus Query: 16 actttgatttgtgcttgcctgacatcttgcagaccgcaggt 56 |||| ||||||| |||| || |||||||||||||||||||| Sbjct: 38303 acttcgatttgt-cttgtctaacatcttgcagaccgcaggt 38342
>dbj|AB204873.1| Phaseolus vulgaris Pvphot1b mRNA for phototropin, complete cds Length = 3324 Score = 99.6 bits (50), Expect = 1e-17 Identities = 107/126 (84%) Strand = Plus / Plus Query: 124 gaaccgatgcgagcatccaattcatttgttggtacagaagagtacattgcacctgagatt 183 ||||| ||| ||||||| ||||| |||||||| || |||||||||||||| || || ||| Sbjct: 2518 gaaccaatgagagcatcaaattcttttgttggcacggaagagtacattgctccggaaatt 2577 Query: 184 attaccggagctggccatacaagtgctgttgattggtgggcgctagggattcttctgtat 243 || || || |||| || || |||||||||||||||||||||||||| |||||| | ||| Sbjct: 2578 ataactggttctggtcacactagtgctgttgattggtgggcgctaggtattcttgtatat 2637 Query: 244 gaaatg 249 |||||| Sbjct: 2638 gaaatg 2643
>ref|NM_180881.1| Arabidopsis thaliana PHOT2 (NON PHOTOTROPIC HYPOCOTYL 1-LIKE); kinase AT5G58140 (PHOT2) transcript variant AT5G58140.3 mRNA, complete cds Length = 6033 Score = 93.7 bits (47), Expect = 7e-16 Identities = 122/147 (82%) Strand = Plus / Plus Query: 160 gaagagtacattgcacctgagattattaccggagctggccatacaagtgctgttgattgg 219 ||||| |||||||| |||||||| || || || ||||| |||||||||||| |||||||| Sbjct: 2469 gaagaatacattgcgcctgagataatcacgggtgctggtcatacaagtgctattgattgg 2528 Query: 220 tgggcgctagggattcttctgtatgaaatgctgtatggttacacacccttcagaggtaaa 279 ||||| || || || | ||||||| ||||| |||||| |||||| ||||| ||||| Sbjct: 2529 tgggcactgggtatcttgttgtatgagatgctttatggtcgcacacctttcaggggtaag 2588 Query: 280 accaggcaaaggacatttgccaacatc 306 | ||||||| |||||||||||||||| Sbjct: 2589 aataggcaaaagacatttgccaacatc 2615
>ref|NM_180879.1| Arabidopsis thaliana PHOT2 (NON PHOTOTROPIC HYPOCOTYL 1-LIKE); kinase AT5G58140 (PHOT2) transcript variant AT5G58140.1 mRNA, complete cds Length = 5977 Score = 93.7 bits (47), Expect = 7e-16 Identities = 122/147 (82%) Strand = Plus / Plus Query: 160 gaagagtacattgcacctgagattattaccggagctggccatacaagtgctgttgattgg 219 ||||| |||||||| |||||||| || || || ||||| |||||||||||| |||||||| Sbjct: 2413 gaagaatacattgcgcctgagataatcacgggtgctggtcatacaagtgctattgattgg 2472 Query: 220 tgggcgctagggattcttctgtatgaaatgctgtatggttacacacccttcagaggtaaa 279 ||||| || || || | ||||||| ||||| |||||| |||||| ||||| ||||| Sbjct: 2473 tgggcactgggtatcttgttgtatgagatgctttatggtcgcacacctttcaggggtaag 2532 Query: 280 accaggcaaaggacatttgccaacatc 306 | ||||||| |||||||||||||||| Sbjct: 2533 aataggcaaaagacatttgccaacatc 2559
>ref|NM_180880.1| Arabidopsis thaliana PHOT2 (NON PHOTOTROPIC HYPOCOTYL 1-LIKE); kinase AT5G58140 (PHOT2) transcript variant AT5G58140.2 mRNA, complete cds Length = 6033 Score = 93.7 bits (47), Expect = 7e-16 Identities = 122/147 (82%) Strand = Plus / Plus Query: 160 gaagagtacattgcacctgagattattaccggagctggccatacaagtgctgttgattgg 219 ||||| |||||||| |||||||| || || || ||||| |||||||||||| |||||||| Sbjct: 2469 gaagaatacattgcgcctgagataatcacgggtgctggtcatacaagtgctattgattgg 2528 Query: 220 tgggcgctagggattcttctgtatgaaatgctgtatggttacacacccttcagaggtaaa 279 ||||| || || || | ||||||| ||||| |||||| |||||| ||||| ||||| Sbjct: 2529 tgggcactgggtatcttgttgtatgagatgctttatggtcgcacacctttcaggggtaag 2588 Query: 280 accaggcaaaggacatttgccaacatc 306 | ||||||| |||||||||||||||| Sbjct: 2589 aataggcaaaagacatttgccaacatc 2615
>gb|AY093141.1| Arabidopsis thaliana unknown protein (At5g58140) mRNA, complete cds Length = 3108 Score = 93.7 bits (47), Expect = 7e-16 Identities = 122/147 (82%) Strand = Plus / Plus Query: 160 gaagagtacattgcacctgagattattaccggagctggccatacaagtgctgttgattgg 219 ||||| |||||||| |||||||| || || || ||||| |||||||||||| |||||||| Sbjct: 2544 gaagaatacattgcgcctgagataatcacgggtgctggtcatacaagtgctattgattgg 2603 Query: 220 tgggcgctagggattcttctgtatgaaatgctgtatggttacacacccttcagaggtaaa 279 ||||| || || || | ||||||| ||||| |||||| |||||| ||||| ||||| Sbjct: 2604 tgggcactgggtatcttgttgtatgagatgctttatggtcgcacacctttcaggggtaag 2663 Query: 280 accaggcaaaggacatttgccaacatc 306 | ||||||| |||||||||||||||| Sbjct: 2664 aataggcaaaagacatttgccaacatc 2690
>gb|AF053941.2|AF053941 Arabidopsis thaliana non phototropic hypocotyl 1-like (NPL1) mRNA, complete cds Length = 2890 Score = 93.7 bits (47), Expect = 7e-16 Identities = 122/147 (82%) Strand = Plus / Plus Query: 160 gaagagtacattgcacctgagattattaccggagctggccatacaagtgctgttgattgg 219 ||||| |||||||| |||||||| || || || ||||| |||||||||||| |||||||| Sbjct: 2308 gaagaatacattgcgcctgagataatcacgggtgctggtcatacaagtgctattgattgg 2367 Query: 220 tgggcgctagggattcttctgtatgaaatgctgtatggttacacacccttcagaggtaaa 279 ||||| || || || | ||||||| ||||| |||||| |||||| ||||| ||||| Sbjct: 2368 tgggcactgggtatcttgttgtatgagatgctttatggtcgcacacctttcaggggtaag 2427 Query: 280 accaggcaaaggacatttgccaacatc 306 | ||||||| |||||||||||||||| Sbjct: 2428 aataggcaaaagacatttgccaacatc 2454
>gb|U79744.1|ATU79744 Arabidopsis thaliana putative serine/threonine protein kinase (AtKin7) mRNA, partial cds Length = 1209 Score = 93.7 bits (47), Expect = 7e-16 Identities = 122/147 (82%) Strand = Plus / Plus Query: 160 gaagagtacattgcacctgagattattaccggagctggccatacaagtgctgttgattgg 219 ||||| |||||||| |||||||| || || || ||||| |||||||||||| |||||||| Sbjct: 627 gaagaatacattgcgcctgagataatcacgggtgctggtcatacaagtgctattgattgg 686 Query: 220 tgggcgctagggattcttctgtatgaaatgctgtatggttacacacccttcagaggtaaa 279 ||||| || || || | ||||||| ||||| |||||| |||||| ||||| ||||| Sbjct: 687 tgggcactgggtatcttgttgtatgagatgctttatggtcgcacacctttcaggggtaag 746 Query: 280 accaggcaaaggacatttgccaacatc 306 | ||||||| |||||||||||||||| Sbjct: 747 aataggcaaaagacatttgccaacatc 773
>dbj|AB204872.1| Phaseolus vulgaris Pvphot1a mRNA for phototropin, complete cds Length = 3272 Score = 85.7 bits (43), Expect = 2e-13 Identities = 157/195 (80%) Strand = Plus / Plus Query: 124 gaaccgatgcgagcatccaattcatttgttggtacagaagagtacattgcacctgagatt 183 ||||| ||| ||||||| || || ||||| || |||||||||||||| || || || ||| Sbjct: 2560 gaacctatgagagcatcaaactcttttgtgggcacagaagagtacatagctccggaaatt 2619 Query: 184 attaccggagctggccatacaagtgctgttgattggtgggcgctagggattcttctgtat 243 || || || | |||||| | |||||||| ||||||||||| || || |||||||| ||| Sbjct: 2620 ataacgggttcaggccattctagtgctgtggattggtgggctctgggaattcttctatat 2679 Query: 244 gaaatgctgtatggttacacacccttcagaggtaaaaccaggcaaaggacatttgccaac 303 |||||| | | ||| || ||||| ||||| || || ||||||||||| |||||| | || Sbjct: 2680 gaaatgttttttggatatacaccattcaggggaaagaccaggcaaagaacatttacaaat 2739 Query: 304 atcctacacaaggac 318 || || ||||||||| Sbjct: 2740 attcttcacaaggac 2754
>ref|NM_001035737.1| Arabidopsis thaliana PHOT1; kinase AT3G45780 (PHOT1) transcript variant AT3G45780.2 mRNA, complete cds Length = 3355 Score = 75.8 bits (38), Expect = 2e-10 Identities = 104/126 (82%) Strand = Plus / Plus Query: 124 gaaccgatgcgagcatccaattcatttgttggtacagaagagtacattgcacctgagatt 183 ||||| ||||| ||||| || ||||||||||| || |||||||||||||| || || ||| Sbjct: 2644 gaaccaatgcgtgcatcaaactcatttgttggcactgaagagtacattgctccggaaatt 2703 Query: 184 attaccggagctggccatacaagtgctgttgattggtgggcgctagggattcttctgtat 243 || ||||||| || ||||| ||||| || || |||||||| || || || ||| ||||| Sbjct: 2704 atatccggagcaggacatacgagtgcagtagactggtgggctcttggtatacttatgtat 2763 Query: 244 gaaatg 249 |||||| Sbjct: 2764 gaaatg 2769
>ref|NM_114447.2| Arabidopsis thaliana PHOT1; kinase AT3G45780 (PHOT1) transcript variant AT3G45780.1 mRNA, complete cds Length = 3249 Score = 75.8 bits (38), Expect = 2e-10 Identities = 104/126 (82%) Strand = Plus / Plus Query: 124 gaaccgatgcgagcatccaattcatttgttggtacagaagagtacattgcacctgagatt 183 ||||| ||||| ||||| || ||||||||||| || |||||||||||||| || || ||| Sbjct: 2593 gaaccaatgcgtgcatcaaactcatttgttggcactgaagagtacattgctccggaaatt 2652 Query: 184 attaccggagctggccatacaagtgctgttgattggtgggcgctagggattcttctgtat 243 || ||||||| || ||||| ||||| || || |||||||| || || || ||| ||||| Sbjct: 2653 atatccggagcaggacatacgagtgcagtagactggtgggctcttggtatacttatgtat 2712 Query: 244 gaaatg 249 |||||| Sbjct: 2713 gaaatg 2718
>gb|AY040062.1| Arabidopsis thaliana putative nonphototropic hypocotyl 1 protein (At3g45780) mRNA, complete cds Length = 2991 Score = 75.8 bits (38), Expect = 2e-10 Identities = 104/126 (82%) Strand = Plus / Plus Query: 124 gaaccgatgcgagcatccaattcatttgttggtacagaagagtacattgcacctgagatt 183 ||||| ||||| ||||| || ||||||||||| || |||||||||||||| || || ||| Sbjct: 2530 gaaccaatgcgtgcatcaaactcatttgttggcactgaagagtacattgctccggaaatt 2589 Query: 184 attaccggagctggccatacaagtgctgttgattggtgggcgctagggattcttctgtat 243 || ||||||| || ||||| ||||| || || |||||||| || || || ||| ||||| Sbjct: 2590 atatccggagcaggacatacgagtgcagtagactggtgggctcttggtatacttatgtat 2649 Query: 244 gaaatg 249 |||||| Sbjct: 2650 gaaatg 2655
>gb|AF360218.1| Arabidopsis thaliana putative nonphototropic hypocotyl 1 protein (At3g45780) mRNA, complete cds Length = 3117 Score = 75.8 bits (38), Expect = 2e-10 Identities = 104/126 (82%) Strand = Plus / Plus Query: 124 gaaccgatgcgagcatccaattcatttgttggtacagaagagtacattgcacctgagatt 183 ||||| ||||| ||||| || ||||||||||| || |||||||||||||| || || ||| Sbjct: 2547 gaaccaatgcgtgcatcaaactcatttgttggcactgaagagtacattgctccggaaatt 2606 Query: 184 attaccggagctggccatacaagtgctgttgattggtgggcgctagggattcttctgtat 243 || ||||||| || ||||| ||||| || || |||||||| || || || ||| ||||| Sbjct: 2607 atatccggagcaggacatacgagtgcagtagactggtgggctcttggtatacttatgtat 2666 Query: 244 gaaatg 249 |||||| Sbjct: 2667 gaaatg 2672
>dbj|AB115545.1| Adiantum capillus-veneris PHOT2 mRNA for phototropin 2, complete cds Length = 3543 Score = 75.8 bits (38), Expect = 2e-10 Identities = 86/102 (84%) Strand = Plus / Plus Query: 148 tttgttggtacagaagagtacattgcacctgagattattaccggagctggccatacaagt 207 |||||||| ||||| ||||| |||||||| ||| |||| || || ||||| |||| ||| Sbjct: 2896 tttgttggcacagaggagtatattgcaccggaggttatcacgggggctgggcatagtagt 2955 Query: 208 gctgttgattggtgggcgctagggattcttctgtatgaaatg 249 ||||| ||||||||||| ||||||||||| | ||||||||| Sbjct: 2956 gctgtagattggtgggctgtagggattcttttatatgaaatg 2997
>gb|AF030864.1|AF030864 Arabidopsis thaliana nonphototropic hypocotyl 1 (NPH1) mRNA, complete cds Length = 3247 Score = 75.8 bits (38), Expect = 2e-10 Identities = 104/126 (82%) Strand = Plus / Plus Query: 124 gaaccgatgcgagcatccaattcatttgttggtacagaagagtacattgcacctgagatt 183 ||||| ||||| ||||| || ||||||||||| || |||||||||||||| || || ||| Sbjct: 2593 gaaccaatgcgtgcatcaaactcatttgttggcactgaagagtacattgctccggaaatt 2652 Query: 184 attaccggagctggccatacaagtgctgttgattggtgggcgctagggattcttctgtat 243 || ||||||| || ||||| ||||| || || |||||||| || || || ||| ||||| Sbjct: 2653 atatccggagcaggacatacgagtgcagtagactggtgggctcttggtatacttatgtat 2712 Query: 244 gaaatg 249 |||||| Sbjct: 2713 gaaatg 2718
>ref|XM_471720.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2724 Score = 73.8 bits (37), Expect = 7e-10 Identities = 100/121 (82%) Strand = Plus / Plus Query: 137 catccaattcatttgttggtacagaagagtacattgcacctgagattattaccggagctg 196 |||| ||||||||||||||||| |||||||| || || || ||| |||| || || || | Sbjct: 2276 catcaaattcatttgttggtactgaagagtatatcgctccagaggttataacgggtgcag 2335 Query: 197 gccatacaagtgctgttgattggtgggcgctagggattcttctgtatgaaatgctgtatg 256 | ||||||||||| | ||||||||||| || || ||||| ||||||| |||||||||| Sbjct: 2336 ggcatacaagtgcaatcgattggtgggctctcggaattctattgtatgagatgctgtatg 2395 Query: 257 g 257 | Sbjct: 2396 g 2396
>dbj|AK067128.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098G17, full insert sequence Length = 2791 Score = 73.8 bits (37), Expect = 7e-10 Identities = 100/121 (82%) Strand = Plus / Plus Query: 137 catccaattcatttgttggtacagaagagtacattgcacctgagattattaccggagctg 196 |||| ||||||||||||||||| |||||||| || || || ||| |||| || || || | Sbjct: 2112 catcaaattcatttgttggtactgaagagtatatcgctccagaggttataacgggtgcag 2171 Query: 197 gccatacaagtgctgttgattggtgggcgctagggattcttctgtatgaaatgctgtatg 256 | ||||||||||| | ||||||||||| || || ||||| ||||||| |||||||||| Sbjct: 2172 ggcatacaagtgcaatcgattggtgggctctcggaattctattgtatgagatgctgtatg 2231 Query: 257 g 257 | Sbjct: 2232 g 2232
>dbj|AB018443.1| Oryza sativa (japonica cultivar-group) mRNA for nonphototrophic hypocotyl 1b, complete cds Length = 3134 Score = 73.8 bits (37), Expect = 7e-10 Identities = 100/121 (82%) Strand = Plus / Plus Query: 137 catccaattcatttgttggtacagaagagtacattgcacctgagattattaccggagctg 196 |||| ||||||||||||||||| |||||||| || || || ||| |||| || || || | Sbjct: 2467 catcaaattcatttgttggtactgaagagtatatcgctccagaggttataacgggtgcag 2526 Query: 197 gccatacaagtgctgttgattggtgggcgctagggattcttctgtatgaaatgctgtatg 256 | ||||||||||| | ||||||||||| || || ||||| ||||||| |||||||||| Sbjct: 2527 ggcatacaagtgcaatcgattggtgggctctcggaattctattgtatgagatgctgtatg 2586 Query: 257 g 257 | Sbjct: 2587 g 2587
>gb|AC135230.8| Medicago truncatula clone mth2-23e14, complete sequence Length = 124972 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 121 gcggaaccgatgcgagcatccaattcatttgttggtacagaagagtacat 170 |||||||| ||| |||| |||||||| ||||||||||||||||||||||| Sbjct: 111567 gcggaaccaatgagagcgtccaattcttttgttggtacagaagagtacat 111616 Score = 63.9 bits (32), Expect = 7e-07 Identities = 74/88 (84%) Strand = Plus / Plus Query: 227 tagggattcttctgtatgaaatgctgtatggttacacacccttcagaggtaaaaccaggc 286 |||| |||||||| ||||||||||| ||||| |||||||| ||||| || || || || | Sbjct: 112370 taggtattcttctatatgaaatgctttatggatacacaccattcaggggaaagacaagac 112429 Query: 287 aaaggacatttgccaacatcctacacaa 314 ||| ||||||||| ||||| || ||||| Sbjct: 112430 aaaagacatttgcaaacattcttcacaa 112457
>gb|AC137829.23| Medicago truncatula clone mth2-34j5, complete sequence Length = 127295 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 121 gcggaaccgatgcgagcatccaattcatttgttggtacagaagagtacat 170 |||||||| ||| |||| |||||||| ||||||||||||||||||||||| Sbjct: 14913 gcggaaccaatgagagcgtccaattcttttgttggtacagaagagtacat 14864 Score = 63.9 bits (32), Expect = 7e-07 Identities = 74/88 (84%) Strand = Plus / Minus Query: 227 tagggattcttctgtatgaaatgctgtatggttacacacccttcagaggtaaaaccaggc 286 |||| |||||||| ||||||||||| ||||| |||||||| ||||| || || || || | Sbjct: 14110 taggtattcttctatatgaaatgctttatggatacacaccattcaggggaaagacaagac 14051 Query: 287 aaaggacatttgccaacatcctacacaa 314 ||| ||||||||| ||||| || ||||| Sbjct: 14050 aaaagacatttgcaaacattcttcacaa 14023
>gb|AY093427.1| Pisum sativum phototropin 1 (PK4) gene, complete cds Length = 12514 Score = 61.9 bits (31), Expect = 3e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 232 attcttctgtatgaaatgctgtatggttacacacccttcagaggtaaaaccaggcaaagg 291 |||||||| ||||||||||| ||||| || ||||| |||||||| || || || |||| | Sbjct: 10769 attcttctatatgaaatgctttatggatatacaccattcagaggaaagacaagacaaaag 10828 Query: 292 acatttgccaacatcctacacaa 314 |||||||| ||||| || ||||| Sbjct: 10829 acatttgcaaacattcttcacaa 10851 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 124 gaaccgatgcgagcatccaattcatttgttggtacagaagagtacat 170 ||||| ||| ||||||||||||| |||||||| || ||||||||||| Sbjct: 10388 gaaccaatgagagcatccaattcttttgttggcacggaagagtacat 10434 Score = 40.1 bits (20), Expect = 9.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 199 catacaagtgctgttgattggtgggcgctagg 230 ||||| |||||||| ||||||||||| ||||| Sbjct: 10649 catactagtgctgtagattggtgggctctagg 10680
>dbj|AB019228.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MCK7 Length = 87090 Score = 56.0 bits (28), Expect = 2e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 239 tgtatgaaatgctgtatggttacacacccttcagaggtaaaaccaggcaaaggacatttg 298 ||||||| ||||| |||||| |||||| ||||| ||||| | ||||||| |||||||| Sbjct: 2590 tgtatgagatgctttatggtcgcacacctttcaggggtaagaataggcaaaagacatttg 2649 Query: 299 ccaacatc 306 |||||||| Sbjct: 2650 ccaacatc 2657 Score = 48.1 bits (24), Expect = 0.039 Identities = 30/32 (93%) Strand = Plus / Plus Query: 193 gctggccatacaagtgctgttgattggtgggc 224 ||||| |||||||||||| ||||||||||||| Sbjct: 2460 gctggtcatacaagtgctattgattggtgggc 2491
>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV, complete sequence Length = 1466886 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 142 aattcatttgttggtacagaagagtacattgcacctgag 180 ||||| |||||||| || ||||||||||||||||||||| Sbjct: 996498 aattcttttgttggaacggaagagtacattgcacctgag 996536
>ref|NM_209617.1| Eremothecium gossypii ADR167Wp (ADR167W), mRNA Length = 2622 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 142 aattcatttgttggtacagaagagtacattgcacctgag 180 ||||| |||||||| || ||||||||||||||||||||| Sbjct: 1918 aattcttttgttggaacggaagagtacattgcacctgag 1956
>ref|XM_457529.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0B13519g) partial mRNA Length = 2505 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Plus Query: 142 aattcatttgttggtacagaagagtacattgcacctga 179 ||||| ||||| ||||| |||||||||||||||||||| Sbjct: 1873 aattcgtttgtcggtactgaagagtacattgcacctga 1910
>emb|Z30332.1|SOPRTKINB S.oleracea mRNA for protein kinase Length = 2532 Score = 52.0 bits (26), Expect = 0.003 Identities = 71/86 (82%) Strand = Plus / Plus Query: 145 tcatttgttggtacagaagagtacattgcacctgagattattaccggagctggccataca 204 ||||||||||| || || ||||||||||| ||||| ||||||| ||||| ||||||| Sbjct: 1726 tcatttgttggaaccgaggagtacattgcccctgaagttattactggagcaagccatact 1785 Query: 205 agtgctgttgattggtgggcgctagg 230 || ||| | || |||||||| ||||| Sbjct: 1786 agcgctatcgactggtgggctctagg 1811
>emb|CR382134.1| Debaryomyces hansenii chromosome B of strain CBS767 of Debaryomyces hansenii Length = 1349926 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Plus Query: 142 aattcatttgttggtacagaagagtacattgcacctga 179 ||||| ||||| ||||| |||||||||||||||||||| Sbjct: 1052634 aattcgtttgtcggtactgaagagtacattgcacctga 1052671
>emb|AL162459.2|ATF16L2 Arabidopsis thaliana DNA chromosome 3, BAC clone F16L2 Length = 111338 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Plus Query: 124 gaaccgatgcgagcatccaattcatttgttggtacagaagagtacattgc 173 ||||| ||||| ||||| || ||||||||||| || |||||||||||||| Sbjct: 19586 gaaccaatgcgtgcatcaaactcatttgttggcactgaagagtacattgc 19635
>emb|AL157735.2|ATT6D9 Arabidopsis thaliana DNA chromosome 3, BAC clone T6D9 Length = 79716 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Plus Query: 124 gaaccgatgcgagcatccaattcatttgttggtacagaagagtacattgc 173 ||||| ||||| ||||| || ||||||||||| || |||||||||||||| Sbjct: 73472 gaaccaatgcgtgcatcaaactcatttgttggcactgaagagtacattgc 73521
>emb|X73298.1|SOPKAA S.oleracea mRNA for protein kinase Length = 2647 Score = 52.0 bits (26), Expect = 0.003 Identities = 71/86 (82%) Strand = Plus / Plus Query: 145 tcatttgttggtacagaagagtacattgcacctgagattattaccggagctggccataca 204 ||||||||||| || || ||||||||||| ||||| ||||||| ||||| ||||||| Sbjct: 1841 tcatttgttggaaccgaggagtacattgcccctgaagttattactggagcaagccatact 1900 Query: 205 agtgctgttgattggtgggcgctagg 230 || ||| | || |||||||| ||||| Sbjct: 1901 agcgctatcgactggtgggctctagg 1926
>ref|NM_125199.2| Arabidopsis thaliana PHOT2 (NON PHOTOTROPIC HYPOCOTYL 1-LIKE); kinase AT5G58140 (PHOT2) transcript variant AT5G58140.4 mRNA, complete cds Length = 2827 Score = 48.1 bits (24), Expect = 0.039 Identities = 30/32 (93%) Strand = Plus / Plus Query: 193 gctggccatacaagtgctgttgattggtgggc 224 ||||| |||||||||||| ||||||||||||| Sbjct: 2759 gctggtcatacaagtgctattgattggtgggc 2790
>gb|M69033.1|PEAPSPK4 Pea putative protein serine/threonine kinase (PsPK4) mRNA, partial cds Length = 243 Score = 48.1 bits (24), Expect = 0.039 Identities = 33/36 (91%) Strand = Plus / Plus Query: 124 gaaccgatgcgagcatccaattcatttgttggtaca 159 ||||| ||| ||||||||||||| |||||||||||| Sbjct: 187 gaaccaatgagagcatccaattcttttgttggtaca 222
>ref|XM_707513.1| Candida albicans SC5314 putative protein kinase (CaO19.223), mRNA Length = 2385 Score = 46.1 bits (23), Expect = 0.16 Identities = 44/51 (86%) Strand = Plus / Plus Query: 199 catacaagtgctgttgattggtgggcgctagggattcttctgtatgaaatg 249 ||||| |||||||||||||||||| | ||||||| |||| ||||||||| Sbjct: 1789 catactagtgctgttgattggtggacattagggatatttctttatgaaatg 1839
>ref|XM_707486.1| Candida albicans SC5314 putative protein kinase (CaO19.7854), mRNA Length = 2388 Score = 46.1 bits (23), Expect = 0.16 Identities = 44/51 (86%) Strand = Plus / Plus Query: 199 catacaagtgctgttgattggtgggcgctagggattcttctgtatgaaatg 249 ||||| |||||||||||||||||| | ||||||| |||| ||||||||| Sbjct: 1792 catactagtgctgttgattggtggacattagggatatttctttatgaaatg 1842
>gb|AC024909.28| Homo sapiens 12 BAC RP11-823E8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 179151 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 80 agaaaagtaggaggaaaagcagg 102 ||||||||||||||||||||||| Sbjct: 159460 agaaaagtaggaggaaaagcagg 159482
>ref|XM_397273.2| PREDICTED: Apis mellifera similar to GA10200-PA (LOC413834), mRNA Length = 2052 Score = 46.1 bits (23), Expect = 0.16 Identities = 38/43 (88%) Strand = Plus / Plus Query: 209 ctgttgattggtgggcgctagggattcttctgtatgaaatgct 251 |||| |||||||||||||| || | ||||||||||||||||| Sbjct: 1556 ctgtagattggtgggcgcttggtgtacttctgtatgaaatgct 1598
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Minus Query: 137 catccaattcatttgttggtacagaagagta 167 |||| ||||||||||||||||| |||||||| Sbjct: 13696578 catcaaattcatttgttggtactgaagagta 13696548
>emb|AL731609.2|OSJN00259 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0079M09, complete sequence Length = 187359 Score = 46.1 bits (23), Expect = 0.16 Identities = 29/31 (93%) Strand = Plus / Minus Query: 137 catccaattcatttgttggtacagaagagta 167 |||| ||||||||||||||||| |||||||| Sbjct: 91186 catcaaattcatttgttggtactgaagagta 91156
>ref|XM_519793.1| PREDICTED: Pan troglodytes serum/glucocorticoid regulated kinase-like (LOC464217), mRNA Length = 1443 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 236 ttctgtatgaaatgctgtatgg 257 |||||||||||||||||||||| Sbjct: 1001 ttctgtatgaaatgctgtatgg 1022
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 540 cgatgctgccgccgccgataat 561 |||||||||||||||||||||| Sbjct: 591499 cgatgctgccgccgccgataat 591478
>ref|NM_001033578.1| Homo sapiens serum/glucocorticoid regulated kinase family, member 3 (SGK3), transcript variant 3, mRNA Length = 4241 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 236 ttctgtatgaaatgctgtatgg 257 |||||||||||||||||||||| Sbjct: 1348 ttctgtatgaaatgctgtatgg 1369
>ref|NM_013257.3| Homo sapiens serum/glucocorticoid regulated kinase family, member 3 (SGK3), transcript variant 1, mRNA Length = 4155 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 236 ttctgtatgaaatgctgtatgg 257 |||||||||||||||||||||| Sbjct: 1263 ttctgtatgaaatgctgtatgg 1284
>ref|XM_756752.1| Ustilago maydis 521 hypothetical protein (UM05698.1) partial mRNA Length = 2253 Score = 44.1 bits (22), Expect = 0.62 Identities = 31/34 (91%) Strand = Plus / Plus Query: 140 ccaattcatttgttggtacagaagagtacattgc 173 ||||||| ||||| || ||||||||||||||||| Sbjct: 1676 ccaattcgtttgtcggcacagaagagtacattgc 1709
>ref|XM_384558.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG04382.1) partial mRNA Length = 1839 Score = 44.1 bits (22), Expect = 0.62 Identities = 31/34 (91%) Strand = Plus / Plus Query: 140 ccaattcatttgttggtacagaagagtacattgc 173 ||||||| ||||| || ||||||||||||||||| Sbjct: 1283 ccaattcttttgtaggcacagaagagtacattgc 1316
>emb|CR933673.1| Homo sapiens mRNA; cDNA DKFZp781N0293 (from clone DKFZp781N0293) Length = 2575 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 236 ttctgtatgaaatgctgtatgg 257 |||||||||||||||||||||| Sbjct: 1243 ttctgtatgaaatgctgtatgg 1264
>emb|BX842573.1| Mycobacterium tuberculosis H37Rv complete genome; segment 2/13 Length = 342416 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 540 cgatgctgccgccgccgataat 561 |||||||||||||||||||||| Sbjct: 248224 cgatgctgccgccgccgataat 248203
>emb|BX248335.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 2/14 Length = 324050 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 540 cgatgctgccgccgccgataat 561 |||||||||||||||||||||| Sbjct: 248282 cgatgctgccgccgccgataat 248261
>emb|CR860211.1| Pongo pygmaeus mRNA; cDNA DKFZp469J0919 (from clone DKFZp469J0919) Length = 3138 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 236 ttctgtatgaaatgctgtatgg 257 |||||||||||||||||||||| Sbjct: 1438 ttctgtatgaaatgctgtatgg 1459
>gb|AC011031.12| Homo sapiens chromosome 8, clone RP11-345I19, complete sequence Length = 183771 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 236 ttctgtatgaaatgctgtatgg 257 |||||||||||||||||||||| Sbjct: 89630 ttctgtatgaaatgctgtatgg 89651
>gb|AF085233.2|AF085233 Homo sapiens SGK-like protein SGKL mRNA, complete cds Length = 3984 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 236 ttctgtatgaaatgctgtatgg 257 |||||||||||||||||||||| Sbjct: 1100 ttctgtatgaaatgctgtatgg 1121
>emb|CR536581.1| Homo sapiens full open reading frame cDNA clone RZPDo834B1122D for gene SGKL, serum/glucocorticoid regulated kinase-like; complete cds, incl. stopcodon Length = 1290 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 236 ttctgtatgaaatgctgtatgg 257 |||||||||||||||||||||| Sbjct: 848 ttctgtatgaaatgctgtatgg 869
>gb|AY335593.1| Synthetic construct Homo sapiens serum/glucocorticoid regulated kinase-like (SGKL) mRNA, partial cds Length = 1491 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 236 ttctgtatgaaatgctgtatgg 257 |||||||||||||||||||||| Sbjct: 1049 ttctgtatgaaatgctgtatgg 1070
>dbj|AK223523.1| Homo sapiens mRNA for serum/glucocorticoid regulated kinase-like isoform 1 variant, clone: FCC123D11 Length = 2618 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 236 ttctgtatgaaatgctgtatgg 257 |||||||||||||||||||||| Sbjct: 1278 ttctgtatgaaatgctgtatgg 1299
>dbj|AB163423.1| Physcomitrella patens PHOTB2 mRNA for phototropin, complete cds Length = 3871 Score = 44.1 bits (22), Expect = 0.62 Identities = 37/42 (88%) Strand = Plus / Plus Query: 151 gttggtacagaagagtacattgcacctgagattattaccgga 192 |||||||| ||||| || ||||| ||||| |||||||||||| Sbjct: 3254 gttggtaccgaagaatatattgcgcctgaaattattaccgga 3295
>dbj|AB163420.1| Physcomitrella patens PHOTA1 mRNA for phototropin, complete cds Length = 4165 Score = 44.1 bits (22), Expect = 0.62 Identities = 40/46 (86%) Strand = Plus / Plus Query: 137 catccaattcatttgttggtacagaagagtacattgcacctgagat 182 |||||||||| || |||| || ||||| ||||||||||||||||| Sbjct: 2921 catccaattctttcattgggacggaagaatacattgcacctgagat 2966
>emb|BX649057.1|HSM809208 Homo sapiens mRNA; cDNA DKFZp779G0825 (from clone DKFZp779G0825) Length = 2952 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 236 ttctgtatgaaatgctgtatgg 257 |||||||||||||||||||||| Sbjct: 1617 ttctgtatgaaatgctgtatgg 1638
>gb|AF169035.1|AF169035 Homo sapiens protein kinase (SGK3) mRNA, complete cds Length = 2391 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 236 ttctgtatgaaatgctgtatgg 257 |||||||||||||||||||||| Sbjct: 1070 ttctgtatgaaatgctgtatgg 1091
>gb|BC015326.1| Homo sapiens serum/glucocorticoid regulated kinase family, member 3, transcript variant 3, mRNA (cDNA clone MGC:21163 IMAGE:4391699), complete cds Length = 1768 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 236 ttctgtatgaaatgctgtatgg 257 |||||||||||||||||||||| Sbjct: 1103 ttctgtatgaaatgctgtatgg 1124
>ref|NM_111707.2| Arabidopsis thaliana ATPK1; kinase AT3G08730 (ATPK1) mRNA, complete cds Length = 1835 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 227 tagggattcttctgtatgaaatgct 251 ||||||||||||||||||| ||||| Sbjct: 1253 tagggattcttctgtatgagatgct 1277
>ref|XM_804361.1| Trypanosoma cruzi strain CL Brener protein kinase A catalytic subunit (Tc00.1047053511269.50) partial mRNA Length = 1014 Score = 42.1 bits (21), Expect = 2.4 Identities = 39/45 (86%) Strand = Plus / Plus Query: 208 gctgttgattggtgggcgctagggattcttctgtatgaaatgctg 252 ||||| |||||||||||||| || ||| | |||||||||||||| Sbjct: 583 gctgtggattggtgggcgcttggcattttattgtatgaaatgctg 627
>ref|XM_800359.1| Trypanosoma cruzi strain CL Brener serine/threonine protein kinase (Tc00.1047053508659.50) partial mRNA Length = 721 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 236 ttctgtatgaaatgctgtatggtta 260 |||||||||||||||||| |||||| Sbjct: 249 ttctgtatgaaatgctgtgtggtta 273
>ref|XM_800384.1| Trypanosoma cruzi strain CL Brener serine/threonine protein kinase (Tc00.1047053510291.40) partial mRNA Length = 691 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 236 ttctgtatgaaatgctgtatggtta 260 |||||||||||||||||| |||||| Sbjct: 219 ttctgtatgaaatgctgtgtggtta 243
>ref|XM_814844.1| Trypanosoma cruzi strain CL Brener protein kinase A catalytic subunit (Tc00.1047053509805.10) partial mRNA Length = 605 Score = 42.1 bits (21), Expect = 2.4 Identities = 39/45 (86%) Strand = Plus / Plus Query: 208 gctgttgattggtgggcgctagggattcttctgtatgaaatgctg 252 ||||| |||||||||||||| || ||| | |||||||||||||| Sbjct: 174 gctgtggattggtgggcgcttggcattttagtgtatgaaatgctg 218
>gb|L29030.1|ATHATPSAAA Arabidopsis thaliana protein-serine kinase mRNA, complete cds Length = 1747 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 227 tagggattcttctgtatgaaatgct 251 ||||||||||||||||||| ||||| Sbjct: 1206 tagggattcttctgtatgagatgct 1230
>emb|AL034554.8|HS994L9 Human DNA sequence from clone RP5-994L9 on chromosome 20p12.3-13 Contains STS and GSSs, complete sequence Length = 137739 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 595 ggaaagacatgccaaagatgt 615 ||||||||||||||||||||| Sbjct: 48546 ggaaagacatgccaaagatgt 48566
>gb|AY096555.1| Arabidopsis thaliana putative ribosomal protein S6 kinase (ATPK6) (At3g08730) mRNA, complete cds Length = 1429 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 227 tagggattcttctgtatgaaatgct 251 ||||||||||||||||||| ||||| Sbjct: 950 tagggattcttctgtatgagatgct 974
>gb|AY065230.1| Arabidopsis thaliana putative ribosomal-protein S6 kinase ATPK6 (At3g08730) mRNA, complete cds Length = 1781 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 227 tagggattcttctgtatgaaatgct 251 ||||||||||||||||||| ||||| Sbjct: 1204 tagggattcttctgtatgagatgct 1228
>gb|AC097366.6| Genomic sequence for Mus musculus, clone RP23-81M23, from chromosome 17, complete sequence Length = 183518 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 79 aagaaaagtaggaggaaaagc 99 ||||||||||||||||||||| Sbjct: 55917 aagaaaagtaggaggaaaagc 55937
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 579 aacgaagaaggtggatggaaa 599 ||||||||||||||||||||| Sbjct: 9757615 aacgaagaaggtggatggaaa 9757635
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Minus Query: 145 tcatttgttggtacagaagagtacattgcacctgagattat 185 ||||||||||||||| | |||||| | || ||||||||||| Sbjct: 10534165 tcatttgttggtacacatgagtacttggcccctgagattat 10534125
>emb|BX823948.1|CNS0A6IK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS9ZE08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1729 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 227 tagggattcttctgtatgaaatgct 251 ||||||||||||||||||| ||||| Sbjct: 1179 tagggattcttctgtatgagatgct 1203
>gb|AC155817.2| Mus musculus BAC clone RP23-473M8 from chromosome 12, complete sequence Length = 159497 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 56 tctttcttccagaagaagcta 76 ||||||||||||||||||||| Sbjct: 70267 tctttcttccagaagaagcta 70247
>gb|AC012562.5|AC012562 Arabidopsis thaliana chromosome 3 BAC F17O14 genomic sequence, complete sequence Length = 90721 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 227 tagggattcttctgtatgaaatgct 251 ||||||||||||||||||| ||||| Sbjct: 63163 tagggattcttctgtatgagatgct 63139
>gb|AY084935.1| Arabidopsis thaliana clone 122224 mRNA, complete sequence Length = 1808 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 227 tagggattcttctgtatgaaatgct 251 ||||||||||||||||||| ||||| Sbjct: 1253 tagggattcttctgtatgagatgct 1277
>gb|AC167420.1| Mus musculus BAC clone RP23-239F23 from chromosome 12, complete sequence Length = 185684 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 56 tctttcttccagaagaagcta 76 ||||||||||||||||||||| Sbjct: 9063 tctttcttccagaagaagcta 9043
>dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome Length = 1669695 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 472 gtgcgcggcacggctcctccg 492 ||||||||||||||||||||| Sbjct: 1577548 gtgcgcggcacggctcctccg 1577568
>dbj|D42056.1|ATHATPK6A Arabidopsis thaliana ATPK6 mRNA for ribosomal-protein S6 kinase homolog, complete cds Length = 1786 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 227 tagggattcttctgtatgaaatgct 251 ||||||||||||||||||| ||||| Sbjct: 1183 tagggattcttctgtatgagatgct 1207
>dbj|AP006860.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1026E06 Length = 162784 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Minus Query: 145 tcatttgttggtacagaagagtacattgcacctgagattat 185 ||||||||||||||| | |||||| | || ||||||||||| Sbjct: 110779 tcatttgttggtacacatgagtacttggcccctgagattat 110739
>dbj|AP005761.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1066D09 Length = 183999 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Minus Query: 145 tcatttgttggtacagaagagtacattgcacctgagattat 185 ||||||||||||||| | |||||| | || ||||||||||| Sbjct: 70872 tcatttgttggtacacatgagtacttggcccctgagattat 70832
>dbj|AP005863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0040N23 Length = 101061 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 579 aacgaagaaggtggatggaaa 599 ||||||||||||||||||||| Sbjct: 30034 aacgaagaaggtggatggaaa 30054
>dbj|AK100261.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023063D14, full insert sequence Length = 2198 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 145 tcatttgttggtacagaagagtacattgcacctgagattat 185 ||||||||||||||| | |||||| | || ||||||||||| Sbjct: 1499 tcatttgttggtacacatgagtacttggcccctgagattat 1539
>gb|J04556.1|RICG11A Rice (O.sativa) G11A protein, partial cds Length = 1593 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Plus Query: 145 tcatttgttggtacagaagagtacattgcacctgagattat 185 ||||||||||||||| | |||||| | || ||||||||||| Sbjct: 1135 tcatttgttggtacacatgagtacttggcccctgagattat 1175
>dbj|AB037188.1| Adiantum capillus-veneris AcNPH1 mRNA for phototropin, complete cds Length = 3475 Score = 42.1 bits (21), Expect = 2.4 Identities = 42/49 (85%) Strand = Plus / Plus Query: 239 tgtatgaaatgctgtatggttacacacccttcagaggtaaaaccaggca 287 ||||||| ||||| ||||| |||||| |||||||| ||||||||||| Sbjct: 2991 tgtatgagatgctatatggacgcacacctttcagaggcaaaaccaggca 3039
>gb|AY372967.1| Scytothamnus australis specimen voucher CNUK PS001 photosystem I P700 apoprotein A1 (psaA) gene, partial cds; plastid Length = 1488 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 185 ttaccggagctggccataca 204 |||||||||||||||||||| Sbjct: 818 ttaccggagctggccataca 837
>ref|XM_707851.1| Candida albicans SC5314 hypothetical protein (CaO19.4519), mRNA Length = 2163 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 aattcatttgttggtacaga 161 |||||||||||||||||||| Sbjct: 1918 aattcatttgttggtacaga 1937
>ref|XM_707818.1| Candida albicans SC5314 hypothetical protein (CaO19.11994), mRNA Length = 2163 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 aattcatttgttggtacaga 161 |||||||||||||||||||| Sbjct: 1918 aattcatttgttggtacaga 1937
>gb|AC112143.5| Mus musculus BAC clone RP23-29E2 from chromosome 2, complete sequence Length = 205920 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 584 agaaggtggatggaaagaca 603 |||||||||||||||||||| Sbjct: 153571 agaaggtggatggaaagaca 153552
>ref|XM_453027.1| Kluyveromyces lactis NRRL Y-1140, KLLA0C18568g predicted mRNA Length = 2325 Score = 40.1 bits (20), Expect = 9.6 Identities = 35/40 (87%) Strand = Plus / Plus Query: 140 ccaattcatttgttggtacagaagagtacattgcacctga 179 ||||||| ||||||||||| ||||| || ||||| ||||| Sbjct: 1670 ccaattcctttgttggtactgaagaatatattgctcctga 1709
>emb|CR932094.1|CNS0KY7F Paramecium tetraurelia centrin-related protein gene Length = 6540 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 tgtatgaaatgctgtatggt 258 |||||||||||||||||||| Sbjct: 2889 tgtatgaaatgctgtatggt 2870
>gb|AC127323.3| Mus musculus BAC clone RP23-242D19 from 18, complete sequence Length = 208152 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 agaagaagctaataagaaaa 85 |||||||||||||||||||| Sbjct: 167613 agaagaagctaataagaaaa 167594
>gb|AC126273.3| Mus musculus BAC clone RP23-99P15 from 7, complete sequence Length = 182698 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 gaggaaaagcaggagttcac 109 |||||||||||||||||||| Sbjct: 164787 gaggaaaagcaggagttcac 164768
>gb|AC124545.4| Mus musculus BAC clone RP23-272D9 from 7, complete sequence Length = 169442 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 gaggaaaagcaggagttcac 109 |||||||||||||||||||| Sbjct: 20979 gaggaaaagcaggagttcac 20960
>gb|AC005532.2| Homo sapiens PAC clone RP4-733B9 from 7, complete sequence Length = 115954 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 tttcttccagaagaagctaa 77 |||||||||||||||||||| Sbjct: 73998 tttcttccagaagaagctaa 74017
>gb|U40943.1| Caenorhabditis elegans cosmid F47F2, complete sequence Length = 24537 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 210 tgttgattggtgggcgctagggattctt 237 ||||||||||||||| ||||| |||||| Sbjct: 15846 tgttgattggtgggctctaggcattctt 15873
>emb|AJ012357.1|CEL012357 Caenorhabditis elegans mRNA for cyclic AMP-dependent protein kinase catalytic subunit Length = 1127 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 210 tgttgattggtgggcgctagggattctt 237 ||||||||||||||| ||||| |||||| Sbjct: 717 tgttgattggtgggctctaggcattctt 744
>gb|AY305378.1| Ralstonia eutropha H16 megaplasmid pHG1, complete sequence Length = 452156 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 537 gggcgatgctgccgccgccg 556 |||||||||||||||||||| Sbjct: 256365 gggcgatgctgccgccgccg 256384
>emb|AL512426.9| Human DNA sequence from clone RP11-94K8 on chromosome 6 Contains the 3' end of a novel gene, complete sequence Length = 55224 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 aaaagtaggaggaaaagcag 101 |||||||||||||||||||| Sbjct: 20828 aaaagtaggaggaaaagcag 20809
>emb|AL365356.13| Human DNA sequence from clone RP11-336A10 on chromosome 10 Contains the ASB13 gene for ankyrin repeat and SOCS box-containing 13, the 5' end of gene FLJ20360 (KIAA2006 FLJ34073 FLJ12904 FLJ23361 FLJ21109), three novel genes, a ribosomal protein L23a (RPL23A) pseudogene, the 5' end of a novel gene and two CpG islands, complete sequence Length = 167676 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 gcaggtctttcttccagaag 70 |||||||||||||||||||| Sbjct: 18739 gcaggtctttcttccagaag 18758
>emb|Z56276.2|SPAC4G8 S.pombe chromosome I cosmid c4G8 Length = 36776 Score = 40.1 bits (20), Expect = 9.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 142 aattcatttgttggtacagaagagtacattgc 173 ||||||||||| || ||||||||||| ||||| Sbjct: 16514 aattcatttgtcggcacagaagagtatattgc 16545
>emb|CR382123.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome C of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1753957 Score = 40.1 bits (20), Expect = 9.6 Identities = 35/40 (87%) Strand = Plus / Plus Query: 140 ccaattcatttgttggtacagaagagtacattgcacctga 179 ||||||| ||||||||||| ||||| || ||||| ||||| Sbjct: 1641627 ccaattcctttgttggtactgaagaatatattgctcctga 1641666
>gb|AC119734.7| Homo sapiens 3 BAC RP11-305D6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 109642 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 83 aaagtaggaggaaaagcagg 102 |||||||||||||||||||| Sbjct: 94614 aaagtaggaggaaaagcagg 94633
>emb|CR388403.8| Zebrafish DNA sequence from clone CH211-153C18 in linkage group 2, complete sequence Length = 159100 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 580 acgaagaaggtggatggaaa 599 |||||||||||||||||||| Sbjct: 74394 acgaagaaggtggatggaaa 74413
>gb|DQ068068.1| Uncultured bacterium BAC17H8, complete sequence Length = 135294 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 539 gcgatgctgccgccgccgat 558 |||||||||||||||||||| Sbjct: 104487 gcgatgctgccgccgccgat 104468
>gb|AC160129.2| Mus musculus BAC clone RP23-253N17 from chromosome 9, complete sequence Length = 205094 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 246 aatgctgtatggttacacac 265 |||||||||||||||||||| Sbjct: 26810 aatgctgtatggttacacac 26829
>gb|AF155582.1|AF155582 Homo sapiens core1 UDP-galactose:N-acetylgalactosamine-alpha-R beta 1,3-galactosyltransferase (C1GALT1) mRNA, complete cds Length = 1794 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 tttcttccagaagaagctaa 77 |||||||||||||||||||| Sbjct: 1704 tttcttccagaagaagctaa 1723
>ref|XM_685356.1| PREDICTED: Danio rerio similar to Ribosomal protein S6 kinase alpha 4 (Nuclear mitogen-and stress-activated protein kinase-2) (90 kDa ribosomal protein S6 kinase 4) (RSK-like protein kinase) (RLSK) (LOC561959), mRNA Length = 1368 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 162 agagtacattgcacctgagattat 185 ||||||||| |||||||||||||| Sbjct: 639 agagtacatggcacctgagattat 662
>ref|NM_001018463.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC4G8.05), partial mRNA Length = 1701 Score = 40.1 bits (20), Expect = 9.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 142 aattcatttgttggtacagaagagtacattgc 173 ||||||||||| || ||||||||||| ||||| Sbjct: 1138 aattcatttgtcggcacagaagagtatattgc 1169
>gb|AC016638.9| Homo sapiens chromosome 5 clone RP11-365H8, complete sequence Length = 182823 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 58 tttcttccagaagaagctaa 77 |||||||||||||||||||| Sbjct: 119721 tttcttccagaagaagctaa 119702
>ref|NM_076271.2| Caenorhabditis elegans F47F2.1a (F47F2.1) mRNA, complete cds Length = 1005 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 210 tgttgattggtgggcgctagggattctt 237 ||||||||||||||| ||||| |||||| Sbjct: 603 tgttgattggtgggctctaggcattctt 630
>ref|NM_171660.2| Caenorhabditis elegans F47F2.1c (F47F2.1) mRNA, complete cds Length = 1308 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 210 tgttgattggtgggcgctagggattctt 237 ||||||||||||||| ||||| |||||| Sbjct: 906 tgttgattggtgggctctaggcattctt 933
>ref|NM_076270.2| Caenorhabditis elegans F47F2.1b (F47F2.1) mRNA, complete cds Length = 1536 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 210 tgttgattggtgggcgctagggattctt 237 ||||||||||||||| ||||| |||||| Sbjct: 869 tgttgattggtgggctctaggcattctt 896
>gb|AC073128.5| Homo sapiens BAC clone RP11-647O5 from 2, complete sequence Length = 55590 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 aagtaggaggaaaagcagga 103 |||||||||||||||||||| Sbjct: 47904 aagtaggaggaaaagcagga 47885
>gb|AC023347.8| Homo sapiens BAC clone RP11-507H23 from 2, complete sequence Length = 174655 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 73 gctaataagaaaagtaggaggaaa 96 ||||| |||||||||||||||||| Sbjct: 47719 gctaagaagaaaagtaggaggaaa 47742
>gb|AC092614.2| Homo sapiens BAC clone RP11-192M8 from 2, complete sequence Length = 106992 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 22 atttgtgcttgcctgacatcttgc 45 |||||||||| ||||||||||||| Sbjct: 103480 atttgtgcttacctgacatcttgc 103503
>gb|AC016888.23| Homo sapiens chromosome 17, clone RP11-452I5, complete sequence Length = 163597 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 577 tgaacgaagaaggtggatggaaag 600 |||| ||||||||||||||||||| Sbjct: 138221 tgaaagaagaaggtggatggaaag 138198
>gb|AC068874.21| Homo sapiens chromosome 17, clone RP11-399J11, complete sequence Length = 174914 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 577 tgaacgaagaaggtggatggaaag 600 |||| ||||||||||||||||||| Sbjct: 165456 tgaaagaagaaggtggatggaaag 165479
>emb|AL928537.12| Mouse DNA sequence from clone RP23-236E7 on chromosome 2, complete sequence Length = 190808 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 584 agaaggtggatggaaagaca 603 |||||||||||||||||||| Sbjct: 4364 agaaggtggatggaaagaca 4345
>gb|BC003174.1| Homo sapiens core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1, mRNA (cDNA clone IMAGE:2957836), partial cds Length = 1499 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 tttcttccagaagaagctaa 77 |||||||||||||||||||| Sbjct: 1409 tttcttccagaagaagctaa 1428
>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome Length = 5411809 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 583 aagaaggtggatggaaagac 602 |||||||||||||||||||| Sbjct: 1407343 aagaaggtggatggaaagac 1407362
>gb|AF002217.1|AF002217 Ralstonia eutropha megaplasmid pHG1 nitric oxide reductase (norB) gene, complete cds Length = 3713 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 537 gggcgatgctgccgccgccg 556 |||||||||||||||||||| Sbjct: 3676 gggcgatgctgccgccgccg 3657
>gb|AC150684.2| Mus musculus BAC clone RP23-268G6 from 7, complete sequence Length = 193525 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 gaggaaaagcaggagttcac 109 |||||||||||||||||||| Sbjct: 190045 gaggaaaagcaggagttcac 190026
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 gaaaagtaggaggaaaagcaggag 104 |||||| ||||||||||||||||| Sbjct: 599469 gaaaagaaggaggaaaagcaggag 599446
>gb|AC156158.1| Homo sapiens chromosome 10 clone WI2-1708O12, complete sequence Length = 43308 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 gcaggtctttcttccagaag 70 |||||||||||||||||||| Sbjct: 32916 gcaggtctttcttccagaag 32935
>ref|NM_020156.1| Homo sapiens core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1 (C1GALT1), mRNA Length = 1794 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 58 tttcttccagaagaagctaa 77 |||||||||||||||||||| Sbjct: 1704 tttcttccagaagaagctaa 1723
>gb|AC067817.10| Homo sapiens chromosome 8, clone RP11-723D22, complete sequence Length = 172678 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 ccttcagaggtaaaaccagg 285 |||||||||||||||||||| Sbjct: 39850 ccttcagaggtaaaaccagg 39869 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,702,725 Number of Sequences: 3902068 Number of extensions: 5702725 Number of successful extensions: 104118 Number of sequences better than 10.0: 144 Number of HSP's better than 10.0 without gapping: 144 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 103531 Number of HSP's gapped (non-prelim): 579 length of query: 703 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 680 effective length of database: 17,143,297,704 effective search space: 11657442438720 effective search space used: 11657442438720 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
