ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd24k21 |
|---|---|
| Clone Library Name | barley_pub |
>DB10_NICSY (P46942) ATP-dependent RNA helicase-like protein DB10 (EC 3.6.1.-)| Length = 607 Score = 292 bits (747), Expect = 7e-79 Identities = 143/198 (72%), Positives = 161/198 (81%) Frame = +3 Query: 39 VNIGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSRN 218 VNIGN DELVANKSITQ++EV MEK RR++QILR +EPGSK+IIFCSTK+MCDQLSRN Sbjct: 350 VNIGNVDELVANKSITQHIEVVLPMEKQRRVEQILRSKEPGSKIIIFCSTKKMCDQLSRN 409 Query: 219 LSRQYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTG 398 L+R +GA+AIHGDKSQ ERD VLS+FR GR P+LVATDVAARGLD+KDIRVV+NYDFPTG Sbjct: 410 LTRNFGAAAIHGDKSQGERDYVLSQFRAGRSPVLVATDVAARGLDIKDIRVVINYDFPTG 469 Query: 399 VEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVSPELRAMVXXXXXX 578 +EDYVHRIGRTGRAGASG+AYTFF DQDSK+A DLVK+LEGANQ V ELR M Sbjct: 470 IEDYVHRIGRTGRAGASGLAYTFFSDQDSKHALDLVKVLEGANQCVPTELRDMASRGGGM 529 Query: 579 XXXXXXWASSNDSYGGHG 632 W S GG G Sbjct: 530 GRARNHWGSGPGGRGGRG 547
>DDX17_MOUSE (Q501J6) Probable ATP-dependent RNA helicase DDX17 (EC 3.6.1.-)| (DEAD box protein 17) Length = 650 Score = 181 bits (460), Expect = 1e-45 Identities = 100/208 (48%), Positives = 133/208 (63%), Gaps = 3/208 (1%) Frame = +3 Query: 39 VNIGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQ--QEPGSKVIIFCSTKRMCDQLS 212 +N+GN EL AN +I Q V+V EK +L Q++ + E +K IIF TKR CD L+ Sbjct: 298 INVGNL-ELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLT 356 Query: 213 RNLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDF 389 R + R + A IHGDKSQ ERD VL+EFR+G+ PIL+ATDVA+RGLDV+D++ V+NYD+ Sbjct: 357 RRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDY 416 Query: 390 PTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVSPELRAMVXXX 569 P EDYVHRIGRT R+ G AYTFF + K A +L+K+LE ANQA++P+L +V Sbjct: 417 PNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQLV--- 473 Query: 570 XXXXXXXXXWASSNDSYGGHGAYGSQTR 653 D GG G G ++R Sbjct: 474 --------------DHRGGGGGGGGRSR 487
>DDX17_HUMAN (Q92841) Probable ATP-dependent RNA helicase DDX17 (EC 3.6.1.-)| (DEAD box protein 17) (RNA-dependent helicase p72) (DEAD box protein p72) Length = 650 Score = 181 bits (460), Expect = 1e-45 Identities = 100/208 (48%), Positives = 133/208 (63%), Gaps = 3/208 (1%) Frame = +3 Query: 39 VNIGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQ--QEPGSKVIIFCSTKRMCDQLS 212 +N+GN EL AN +I Q V+V EK +L Q++ + E +K IIF TKR CD L+ Sbjct: 298 INVGNL-ELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLT 356 Query: 213 RNLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDF 389 R + R + A IHGDKSQ ERD VL+EFR+G+ PIL+ATDVA+RGLDV+D++ V+NYD+ Sbjct: 357 RRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDY 416 Query: 390 PTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVSPELRAMVXXX 569 P EDYVHRIGRT R+ G AYTFF + K A +L+K+LE ANQA++P+L +V Sbjct: 417 PNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQLV--- 473 Query: 570 XXXXXXXXXWASSNDSYGGHGAYGSQTR 653 D GG G G ++R Sbjct: 474 --------------DHRGGGGGGGGRSR 487
>DBP2_KLULA (Q6CIV2) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 554 Score = 179 bits (453), Expect = 9e-45 Identities = 99/184 (53%), Positives = 127/184 (69%), Gaps = 3/184 (1%) Frame = +3 Query: 9 ASXFAH*PCPVNIGNTDELVANKSITQYVEVTTSMEKGRRLDQILR--QQEPGSKVIIFC 182 AS + H P V IG+ EL A+ +ITQ VEV T EK RL + L Q+ SK+IIF Sbjct: 309 ASDYLHDPIQVQIGSL-ELSASHTITQIVEVLTDFEKRDRLAKHLETASQDQDSKIIIFA 367 Query: 183 STKRMCDQLSRNLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVK 359 STKR CD+++ L + + A AIHGDK+Q ERD VL+EFR+GR PI+VATDVAARG+DVK Sbjct: 368 STKRTCDEITSYLRTEGWPALAIHGDKAQNERDWVLAEFRSGRSPIMVATDVAARGIDVK 427 Query: 360 DIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVS 539 I V+NYD P +EDYVHRIGRTGRAG++G A +FF + + + L+KI+ A Q + Sbjct: 428 GINYVINYDMPGNIEDYVHRIGRTGRAGSTGTAISFFTEGNKSLGAALIKIMREAKQDIP 487 Query: 540 PELR 551 ELR Sbjct: 488 EELR 491
>DBP2_ASPOR (Q2U070) ATP-dependent RNA helicase dbp2 (EC 3.6.1.-)| Length = 554 Score = 178 bits (451), Expect = 2e-44 Identities = 104/217 (47%), Positives = 134/217 (61%), Gaps = 3/217 (1%) Frame = +3 Query: 9 ASXFAH*PCPVNIGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQ--QEPGSKVIIFC 182 AS F + VNIG+ D L AN ITQ VEV + EK ++ + L + + G+K +IF Sbjct: 326 ASDFLNDYIQVNIGSMD-LSANHRITQIVEVVSDFEKRDKMIKHLEKIMENRGNKCLIFT 384 Query: 183 STKRMCDQLSRNLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVK 359 TKR+ D+++R L + + A +IHGDK Q ERD VL+EF+TG+ PI+VATDVA+RG+DV+ Sbjct: 385 GTKRIADEITRFLRQDGWPALSIHGDKQQQERDWVLNEFKTGKSPIMVATDVASRGIDVR 444 Query: 360 DIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVS 539 DI V+NYD+P EDYVHRIGRTGRAGA G A TFF +SK A DLV IL A Q + Sbjct: 445 DITHVLNYDYPNNSEDYVHRIGRTGRAGAKGTAITFFTTDNSKQARDLVTILTEAKQQID 504 Query: 540 PELRAMVXXXXXXXXXXXXWASSNDSYGGHGAYGSQT 650 P L MV + GG G G+ T Sbjct: 505 PRLAEMVRYSGGGGGGRGGYGRWGGRGGGRGRGGNYT 541
>DBP2_DEBHA (Q6BY27) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 536 Score = 177 bits (449), Expect = 3e-44 Identities = 96/176 (54%), Positives = 120/176 (68%), Gaps = 3/176 (1%) Frame = +3 Query: 30 PCPVNIGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQQ--EPGSKVIIFCSTKRMCD 203 P V +G+ EL A+ +ITQ VEV T EK RL + L +P +K +IF STKR CD Sbjct: 308 PIQVTVGSL-ELAASHTITQLVEVVTEFEKRDRLIKHLETATADPEAKCLIFASTKRTCD 366 Query: 204 QLSRNLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVN 380 +++ L + A AIHGDK Q ERD VL EF+TG+ PI+VATDVAARG+DVK I V+N Sbjct: 367 EITNYLRADGWPALAIHGDKQQGERDWVLKEFKTGKSPIMVATDVAARGIDVKGISYVIN 426 Query: 381 YDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVSPEL 548 D P +EDYVHRIGRTGRAG++G A +FF D +SK DL KI+ ANQ + PEL Sbjct: 427 LDMPGNIEDYVHRIGRTGRAGSTGTAVSFFTDNNSKLGGDLCKIMREANQTIPPEL 482
>DBP2_YEAST (P24783) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-) (DEAD box| protein 2) (p68-like protein) Length = 546 Score = 177 bits (448), Expect = 3e-44 Identities = 96/183 (52%), Positives = 124/183 (67%), Gaps = 3/183 (1%) Frame = +3 Query: 9 ASXFAH*PCPVNIGNTDELVANKSITQYVEVTTSMEKGRRLDQILR--QQEPGSKVIIFC 182 A+ + + P V +G+ EL A+ +ITQ VEV + EK RL++ L Q+ K +IF Sbjct: 309 AADYLNDPIQVQVGSL-ELSASHNITQIVEVVSDFEKRDRLNKYLETASQDNEYKTLIFA 367 Query: 183 STKRMCDQLSRNLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVK 359 STKRMCD +++ L + A AIHGDK Q ERD VL EFR GR PI+VATDVAARG+DVK Sbjct: 368 STKRMCDDITKYLREDGWPALAIHGDKDQRERDWVLQEFRNGRSPIMVATDVAARGIDVK 427 Query: 360 DIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVS 539 I V+NYD P +EDYVHRIGRTGRAGA+G A +FF +Q+ + L+ I+ ANQ + Sbjct: 428 GINYVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEQNKGLGAKLISIMREANQNIP 487 Query: 540 PEL 548 PEL Sbjct: 488 PEL 490
>DBP2_EMENI (Q5B0J9) ATP-dependent RNA helicase dbp2 (EC 3.6.1.-)| Length = 563 Score = 177 bits (448), Expect = 3e-44 Identities = 102/216 (47%), Positives = 136/216 (62%), Gaps = 3/216 (1%) Frame = +3 Query: 9 ASXFAH*PCPVNIGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQ--QEPGSKVIIFC 182 AS F + VNIG+ D L AN ITQ VEV + EK R+ + L + + G+K ++F Sbjct: 336 ASDFLNNYIQVNIGSMD-LSANHRITQIVEVISEFEKRDRMIKHLEKIMENRGNKCLVFT 394 Query: 183 STKRMCDQLSRNLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVK 359 TKR+ D+++R L + + A +IHGDK Q ERD VL+EF+TG+ PI+VATDVA+RG+DV+ Sbjct: 395 GTKRIADEITRFLRQDGWPALSIHGDKQQQERDWVLNEFKTGKSPIMVATDVASRGIDVR 454 Query: 360 DIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVS 539 DI V+NYD+P EDYVHRIGRTGRAGA G A TFF ++K A DLV IL A Q + Sbjct: 455 DITHVINYDYPNNSEDYVHRIGRTGRAGAKGTAITFFTTDNAKQARDLVTILSEAKQQID 514 Query: 540 PELRAMVXXXXXXXXXXXXWASSNDSYGGHGAYGSQ 647 P L MV ++ GG+G +G + Sbjct: 515 PRLAEMV-----------RYSGGGGHGGGYGRWGGR 539
>DBP2_CRYNE (Q5KFM6) ATP-dependent RNA helicase DBP2-A (EC 3.6.1.-)| Length = 540 Score = 176 bits (447), Expect = 4e-44 Identities = 101/219 (46%), Positives = 133/219 (60%), Gaps = 2/219 (0%) Frame = +3 Query: 9 ASXFAH*PCPVNIGNTDELVANKSITQYVEVTTSMEK-GRRLDQILRQQEPGSKVIIFCS 185 A F H VNIG+ D L AN ++ Q+VEV T +K + L + + + KV+IF + Sbjct: 306 AMDFLHDFIQVNIGSLD-LTANHNVAQHVEVCTDFDKRSKLLSHLEKISQENGKVLIFVA 364 Query: 186 TKRMCDQLSRNLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKD 362 TKR+ D L++ L + A AIHGDK QAERD VL+EF++GR PI++ATDVA+RGLDV+D Sbjct: 365 TKRVADDLTKFLRMDGWPALAIHGDKQQAERDWVLAEFKSGRSPIMLATDVASRGLDVRD 424 Query: 363 IRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVSP 542 I V+NYDFP EDY+HRIGRTGRAG G +YT+F +SK A +LV+IL + + P Sbjct: 425 IGYVINYDFPNNCEDYIHRIGRTGRAGRKGTSYTYFTMDNSKAARELVQILRESKADIPP 484 Query: 543 ELRAMVXXXXXXXXXXXXWASSNDSYGGHGAYGSQTRDG 659 EL M YGG G G + R G Sbjct: 485 ELEEMA------------------MYGGRGGGGGRGRGG 505
>DBP2_ASPFU (Q4X195) ATP-dependent RNA helicase dbp2 (EC 3.6.1.-)| Length = 547 Score = 175 bits (444), Expect = 1e-43 Identities = 102/214 (47%), Positives = 134/214 (62%), Gaps = 3/214 (1%) Frame = +3 Query: 9 ASXFAH*PCPVNIGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQ--QEPGSKVIIFC 182 A+ F + VNIG+ D L AN ITQ VEV + EK ++ + L + + +K +IF Sbjct: 317 ATDFLNDYIQVNIGSMD-LSANHRITQIVEVVSDFEKRDKMIKHLEKIMENRSNKCLIFT 375 Query: 183 STKRMCDQLSRNLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVK 359 TKR+ D+++R L + + A +IHGDK Q ERD VL+EF+TG+ PI+VATDVA+RG+DV+ Sbjct: 376 GTKRIADEITRFLRQDGWPALSIHGDKQQQERDWVLNEFKTGKSPIMVATDVASRGIDVR 435 Query: 360 DIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVS 539 DI V+NYD+P EDY+HRIGRTGRAGA G A TFF ++SK A DLV IL A Q + Sbjct: 436 DITHVLNYDYPNNSEDYIHRIGRTGRAGAKGTAITFFTTENSKQARDLVTILTEAKQQID 495 Query: 540 PELRAMVXXXXXXXXXXXXWASSNDSYGGHGAYG 641 P L M A + GGHG YG Sbjct: 496 PRLAEM--------------ARYSGGGGGHGGYG 515
>DBP2_USTMA (Q4PHU9) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 552 Score = 175 bits (443), Expect = 1e-43 Identities = 97/185 (52%), Positives = 125/185 (67%), Gaps = 2/185 (1%) Frame = +3 Query: 9 ASXFAH*PCPVNIGNTDELVANKSITQYVEVTTSMEK-GRRLDQILRQQEPGSKVIIFCS 185 A F + VNIG+T EL AN ++ Q +EV T EK G+ + + KVIIF S Sbjct: 326 AGDFLNNYAQVNIGST-ELAANHNVKQIIEVCTEFEKKGKLIGHLETISAENGKVIIFTS 384 Query: 186 TKRMCDQLSRNLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKD 362 TKR+ D L++ L + + A AIHGDK Q ERD VL+EF++GR PI+VAT VA+RGLDVKD Sbjct: 385 TKRVADDLTKFLRQDGWPALAIHGDKQQQERDWVLAEFKSGRSPIMVATAVASRGLDVKD 444 Query: 363 IRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVSP 542 I V+NYDFPT EDYVH+IGRTGRAG +G AYT+F ++SK A +L+ IL A Q + Sbjct: 445 ISYVINYDFPTNTEDYVHQIGRTGRAGRTGTAYTYFTPENSKSARELIGILREAKQEIPR 504 Query: 543 ELRAM 557 E+ M Sbjct: 505 EIEEM 509
>DBP3_ASHGO (Q755A5) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 535 Score = 174 bits (442), Expect = 2e-43 Identities = 94/185 (50%), Positives = 122/185 (65%), Gaps = 5/185 (2%) Frame = +3 Query: 9 ASXFAH*PCPVNIGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGSK----VII 176 AS F P V+IGN DEL ANK ITQ VEV +K +RL ++L+Q + G+K V+I Sbjct: 317 ASTFMRAPVKVSIGNRDELSANKRITQVVEVIDPFKKEKRLLELLKQYQSGAKKNDKVLI 376 Query: 177 FCSTKRMCDQLSRNLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLD 353 F K+ ++ RNL Y +AIHGD SQ +R LSEF+ G +L+ATDVAARGLD Sbjct: 377 FALYKKEASRVERNLKYNGYNVAAIHGDLSQQQRTQALSEFKAGTANLLLATDVAARGLD 436 Query: 354 VKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQA 533 + +++ V+N FP VEDYVHRIGRTGRAGA+G+A+T F +Q+ A LV +L GA Q Sbjct: 437 IPNVKTVINLTFPLTVEDYVHRIGRTGRAGATGVAHTLFTEQEKHLAGALVNVLNGAGQP 496 Query: 534 VSPEL 548 V EL Sbjct: 497 VPEEL 501
>DDX5_MOUSE (Q61656) Probable ATP-dependent RNA helicase DDX5 (EC 3.6.1.-)| (DEAD box protein 5) (RNA helicase p68) (DEAD box RNA helicase DEAD1) (mDEAD1) Length = 614 Score = 174 bits (442), Expect = 2e-43 Identities = 89/177 (50%), Positives = 124/177 (70%), Gaps = 3/177 (1%) Frame = +3 Query: 39 VNIGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQ--QEPGSKVIIFCSTKRMCDQLS 212 +NIG EL AN +I Q V+V +EK +L +++ + E +K I+F TKR CD+L+ Sbjct: 300 INIGAL-ELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELT 358 Query: 213 RNLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDF 389 R + R + A IHGDKSQ ERD VL+EF+ G+ PIL+ATDVA+RGLDV+D++ V+NYD+ Sbjct: 359 RKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDY 418 Query: 390 PTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVSPELRAMV 560 P EDY+HRIGRT R+ +G AYTFF + K SDL+ +L ANQA++P+L +V Sbjct: 419 PNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQLV 475
>DDX5_HUMAN (P17844) Probable ATP-dependent RNA helicase DDX5 (EC 3.6.1.-)| (DEAD box protein 5) (RNA helicase p68) Length = 614 Score = 174 bits (442), Expect = 2e-43 Identities = 89/177 (50%), Positives = 124/177 (70%), Gaps = 3/177 (1%) Frame = +3 Query: 39 VNIGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQ--QEPGSKVIIFCSTKRMCDQLS 212 +NIG EL AN +I Q V+V +EK +L +++ + E +K I+F TKR CD+L+ Sbjct: 300 INIGAL-ELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELT 358 Query: 213 RNLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDF 389 R + R + A IHGDKSQ ERD VL+EF+ G+ PIL+ATDVA+RGLDV+D++ V+NYD+ Sbjct: 359 RKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDY 418 Query: 390 PTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVSPELRAMV 560 P EDY+HRIGRT R+ +G AYTFF + K SDL+ +L ANQA++P+L +V Sbjct: 419 PNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQLV 475
>DBP2_CANAL (Q59LU0) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 562 Score = 171 bits (434), Expect = 1e-42 Identities = 100/209 (47%), Positives = 123/209 (58%), Gaps = 3/209 (1%) Frame = +3 Query: 30 PCPVNIGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQ--QEPGSKVIIFCSTKRMCD 203 P V IG+ EL A+ +ITQ VEV K RL + L E +K+++F STKR CD Sbjct: 330 PIQVTIGSL-ELAASHTITQLVEVIDEFSKRDRLVKHLESALNEKDNKILVFASTKRTCD 388 Query: 204 QLSRNL-SRQYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVN 380 +++ L S + A AIHGDK Q ERD VL EFR G+ I+VATDVAARG+DVK I V+N Sbjct: 389 EITTYLRSDGWPALAIHGDKEQNERDWVLDEFRKGKTSIMVATDVAARGIDVKGITHVIN 448 Query: 381 YDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVSPELRAMV 560 YD P +EDYVHRIGRTGR GASG A +FF + +SK DL KI+ ANQ V PEL+ Sbjct: 449 YDMPGNIEDYVHRIGRTGRGGASGTAISFFTEGNSKLGGDLCKIMREANQTVPPELQRFD 508 Query: 561 XXXXXXXXXXXXWASSNDSYGGHGAYGSQ 647 GG G G + Sbjct: 509 RRSYGSHMRFGQGRGGRGGRGGRGGRGGR 537
>DBP2_CANGA (Q6FLF3) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 544 Score = 171 bits (432), Expect = 2e-42 Identities = 95/183 (51%), Positives = 122/183 (66%), Gaps = 3/183 (1%) Frame = +3 Query: 9 ASXFAH*PCPVNIGNTDELVANKSITQYVEVTTSMEKGRRLDQIL--RQQEPGSKVIIFC 182 A + + P V IG+ EL A+ +ITQ VEV + EK RL + L Q+ SK++IF Sbjct: 306 ARDYLNDPIQVQIGSL-ELAASHNITQLVEVVSEFEKRDRLVKHLDTASQDKESKILIFA 364 Query: 183 STKRMCDQLSRNLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVK 359 STKR CD+++ L + + A AIHGDK Q ERD VL+EFRTG PI+VATDVAARG+DVK Sbjct: 365 STKRTCDEITSYLRQDGWPALAIHGDKDQRERDWVLNEFRTGNSPIMVATDVAARGIDVK 424 Query: 360 DIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVS 539 I VVNYD P +EDYVHRIGRTGRAGA+G A +FF + + + L+ I+ A Q + Sbjct: 425 GINFVVNYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEDNKSLGASLISIMREAKQNIP 484 Query: 540 PEL 548 EL Sbjct: 485 EEL 487
>DBP2_GIBZE (Q4IF76) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 555 Score = 171 bits (432), Expect = 2e-42 Identities = 98/215 (45%), Positives = 131/215 (60%), Gaps = 5/215 (2%) Frame = +3 Query: 9 ASXFAH*PCPVNIGNTDELVANKSITQYVEVTTSMEKGRRL----DQILRQQEPGSKVII 176 AS F VNIG+ EL AN ITQ VEV T MEK R+ ++++ +E +K++I Sbjct: 330 ASDFLQDFIQVNIGSM-ELAANHRITQIVEVVTEMEKRDRMIKHMEKVMENKE--NKILI 386 Query: 177 FCSTKRMCDQLSRNLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLD 353 F TKR+ D+++R L + + A +IHGDK Q ERD VL +F+TG+ PI+VATDVA+RG+D Sbjct: 387 FVGTKRVADEITRFLRQDGWPALSIHGDKQQNERDWVLDQFKTGKSPIMVATDVASRGID 446 Query: 354 VKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQA 533 V++I V+NYD+P EDY+HRIGRTGRAGA G A T F + K A DLV +L+ A Q Sbjct: 447 VRNITHVLNYDYPNNSEDYIHRIGRTGRAGAMGTAITLFTTDNQKQARDLVNVLQEAKQQ 506 Query: 534 VSPELRAMVXXXXXXXXXXXXWASSNDSYGGHGAY 638 + P L M W GG G + Sbjct: 507 IDPRLVEMTRYGGGGGRGYGGWGRGRG--GGRGGF 539
>DBP2_NEUCR (Q7SBC6) ATP-dependent RNA helicase dbp-2 (EC 3.6.1.-)| Length = 562 Score = 170 bits (431), Expect = 3e-42 Identities = 92/178 (51%), Positives = 123/178 (69%), Gaps = 5/178 (2%) Frame = +3 Query: 39 VNIGNTDELVANKSITQYVEVTTSMEKGRR----LDQILRQQEPGSKVIIFCSTKRMCDQ 206 VNIG+ D L AN ITQ VEV + EK R L++I+ +E +K++IF TKR+ D Sbjct: 338 VNIGSMD-LAANHRITQIVEVVSESEKRDRMIKHLEKIMEGRENQNKILIFTGTKRVADD 396 Query: 207 LSRNLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNY 383 ++R L + + A +IHGDK Q ERD VL +F+TG+ PI+VATDVA+RG+DV++I V+NY Sbjct: 397 ITRFLRQDGWPALSIHGDKQQNERDWVLDQFKTGKSPIMVATDVASRGIDVRNITHVLNY 456 Query: 384 DFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVSPELRAM 557 D+P EDY+HRIGRTGRAGA G A TFF +SK A +LV +L+ A Q + P L M Sbjct: 457 DYPNNSEDYIHRIGRTGRAGAKGTAITFFTTDNSKQARELVGVLQEAKQQIDPRLAEM 514
>DBP3_YEAST (P20447) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-) (DEAD box| protein 3) (Helicase CA3) Length = 523 Score = 170 bits (431), Expect = 3e-42 Identities = 91/185 (49%), Positives = 122/185 (65%), Gaps = 5/185 (2%) Frame = +3 Query: 9 ASXFAH*PCPVNIGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQQEPG----SKVII 176 AS F + P V+IGNTD+L ANK ITQ VEV K R+L ++L++ G KV+I Sbjct: 305 ASTFMNNPIKVSIGNTDQLTANKRITQIVEVVDPRGKERKLLELLKKYHSGPKKNEKVLI 364 Query: 177 FCSTKRMCDQLSRNLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLD 353 F K+ ++ RNL Y +AIHGD SQ +R L+EF++G+ +L+ATDVAARGLD Sbjct: 365 FALYKKEAARVERNLKYNGYNVAAIHGDLSQQQRTQALNEFKSGKSNLLLATDVAARGLD 424 Query: 354 VKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQA 533 + +++ V+N FP VEDYVHRIGRTGRAG +G A+T F +Q+ A LV +L GANQ Sbjct: 425 IPNVKTVINLTFPLTVEDYVHRIGRTGRAGQTGTAHTLFTEQEKHLAGGLVNVLNGANQP 484 Query: 534 VSPEL 548 V +L Sbjct: 485 VPEDL 489
>DBP2_YARLI (Q6C4D4) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 552 Score = 170 bits (430), Expect = 4e-42 Identities = 101/210 (48%), Positives = 127/210 (60%), Gaps = 3/210 (1%) Frame = +3 Query: 39 VNIGNTDELVANKSITQYVEVTTSMEKGRRLDQILR--QQEPGSKVIIFCSTKRMCDQLS 212 VNIG+ EL A+ +ITQ VEV T EK RL + L + SK +IF TKR+ D ++ Sbjct: 322 VNIGSL-ELSASHNITQVVEVCTEYEKRDRLVKHLETVMENKESKCLIFTGTKRVADDIT 380 Query: 213 RNLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDF 389 + L + + A AIHGDK Q ERD VL+EFR G+ PI+VATDVA+RG+DVK I V+NYD+ Sbjct: 381 KFLRQDGWPALAIHGDKQQQERDWVLNEFRQGKSPIMVATDVASRGIDVKGINFVINYDY 440 Query: 390 PTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVSPELRAMVXXX 569 P+ EDYVHRIGRTGRAG G AYT+F + + K A DL+ IL A Q + P+L M Sbjct: 441 PSNSEDYVHRIGRTGRAGTKGTAYTYFTEDNRKQARDLLVILREAKQHIDPKLEEM---- 496 Query: 570 XXXXXXXXXWASSNDSYGGHGAYGSQTRDG 659 W GG G G R G Sbjct: 497 GGGRGGRGGW-GGRGGRGGRGGRGGYRRGG 525
>DBP3_KLULA (Q6CT46) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 504 Score = 169 bits (429), Expect = 5e-42 Identities = 91/186 (48%), Positives = 119/186 (63%), Gaps = 5/186 (2%) Frame = +3 Query: 9 ASXFAH*PCPVNIGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQQEPG----SKVII 176 AS F P V+IGN DEL ANK ITQ VEV K ++L ++L++ G KV+I Sbjct: 286 ASSFMSEPVKVSIGNRDELSANKRITQIVEVVDPFRKEKKLLELLKKYHSGPTKNDKVLI 345 Query: 177 FCSTKRMCDQLSRNLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLD 353 F K+ ++ RNL Y +AIHGD SQ +R L+EF+ G+C +L+ATDVAARGLD Sbjct: 346 FALYKKEASRVERNLKYNGYDVAAIHGDLSQQQRTQALNEFKAGKCNLLLATDVAARGLD 405 Query: 354 VKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQA 533 + +++ V+N FP VEDYVHRIGRTGRAG G A+T F +Q+ A LV +L GA Q Sbjct: 406 IPNVKTVINLTFPLTVEDYVHRIGRTGRAGQYGTAHTLFTEQEKHLAGALVNVLNGAGQP 465 Query: 534 VSPELR 551 V EL+ Sbjct: 466 VPEELK 471
>DBP2_SCHPO (P24782) ATP-dependent RNA helicase dbp2 (EC 3.6.1.-) (p68-like| protein) Length = 550 Score = 169 bits (428), Expect = 7e-42 Identities = 92/178 (51%), Positives = 125/178 (70%), Gaps = 5/178 (2%) Frame = +3 Query: 39 VNIGNTDELVANKSITQYVEVTTSMEK----GRRLDQILRQQEPGSKVIIFCSTKRMCDQ 206 V +G+ D L A+ +I Q VEV + +K G+ ++++L+ ++ +KV+IF TKR+ D Sbjct: 328 VTVGSLD-LAASHNIKQIVEVVDNADKRARLGKDIEEVLKDRD--NKVLIFTGTKRVADD 384 Query: 207 LSRNLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNY 383 ++R L + + A AIHGDK+Q ERD VL+EFRTG+ PI+VATDVA+RG+DVK I V NY Sbjct: 385 ITRFLRQDGWPALAIHGDKAQDERDWVLNEFRTGKSPIMVATDVASRGIDVKGITHVFNY 444 Query: 384 DFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVSPELRAM 557 DFP EDYVHRIGRTGRAGA G AYT+F ++K A +LV IL A Q + P+L M Sbjct: 445 DFPGNTEDYVHRIGRTGRAGAKGTAYTYFTSDNAKQARELVSILSEAKQDIDPKLEEM 502
>DBP3_CANGA (Q6FS54) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 540 Score = 169 bits (427), Expect = 9e-42 Identities = 91/185 (49%), Positives = 121/185 (65%), Gaps = 5/185 (2%) Frame = +3 Query: 9 ASXFAH*PCPVNIGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQQEPG----SKVII 176 AS F P V+IGN DEL ANK ITQ VEV K R+L +L++ + G KV+I Sbjct: 322 ASTFMKEPVKVSIGNRDELSANKRITQIVEVVDPRSKERKLLDLLKKYQSGPKKNDKVLI 381 Query: 177 FCSTKRMCDQLSRNLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLD 353 F K+ ++ RNL+ Y +AIHGD SQ +R L+EF++G+ +L+ATDVAARGLD Sbjct: 382 FALYKKEASRVERNLNYNGYKVAAIHGDLSQQQRTQALNEFKSGKSNLLLATDVAARGLD 441 Query: 354 VKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQA 533 + +++ V+N FP VEDYVHRIGRTGRAG +G A+T F +Q+ A LV +L GANQ Sbjct: 442 IPNVKTVINLTFPLTVEDYVHRIGRTGRAGQTGTAHTLFTEQEKHLAGGLVNVLNGANQP 501 Query: 534 VSPEL 548 V +L Sbjct: 502 VPEDL 506
>DBP3_DEBHA (Q6BZ77) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 527 Score = 162 bits (409), Expect = 1e-39 Identities = 88/185 (47%), Positives = 121/185 (65%), Gaps = 5/185 (2%) Frame = +3 Query: 9 ASXFAH*PCPVNIGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGS----KVII 176 AS F + P V+IG+ +EL ANK ITQ VEV +K ++L +LR+ + GS KV+I Sbjct: 309 ASTFMNSPVKVSIGDRNELSANKRITQIVEVIEPYDKEKKLLSLLRKYQSGSNKDDKVLI 368 Query: 177 FCSTKRMCDQLSRNLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLD 353 F K+ ++ L R + SA+HGD SQ +R S L F+ G+ +L+ATDVAARGLD Sbjct: 369 FALYKKEATRIENLLVRNSFKVSAVHGDLSQQQRTSALGAFKAGKTTLLLATDVAARGLD 428 Query: 354 VKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQA 533 + +++VV+N FP VEDYVHRIGRTGRAG +GIA+T F + + + L+ +L GANQ Sbjct: 429 IPNVKVVINLTFPLTVEDYVHRIGRTGRAGQTGIAHTLFTEHEKHLSGALMNVLRGANQP 488 Query: 534 VSPEL 548 V EL Sbjct: 489 VPDEL 493
>DBP3_CANAL (Q5APT8) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 564 Score = 161 bits (408), Expect = 1e-39 Identities = 85/185 (45%), Positives = 121/185 (65%), Gaps = 5/185 (2%) Frame = +3 Query: 9 ASXFAH*PCPVNIGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQ----QEPGSKVII 176 A+ F + P V +G+ DEL ANK ITQ VEV +K ++L Q+LR+ + +K++I Sbjct: 346 ANNFMNSPVKVTVGDRDELSANKRITQVVEVINKFDKEKKLIQLLRKYNANESSDNKILI 405 Query: 177 FCSTKRMCDQLSRNLSR-QYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLD 353 F K+ ++ L R ++ +AIHGD SQ +R + LS F++G+ +L+ATDVAARGLD Sbjct: 406 FALYKKEASRIENFLKRNRFSVAAIHGDLSQQQRTAALSAFKSGQSNLLLATDVAARGLD 465 Query: 354 VKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQA 533 + +++VV+N FP +EDYVHRIGRTGRAGA G A+T F + + + L IL GANQ Sbjct: 466 IPNVKVVINLTFPLTIEDYVHRIGRTGRAGAKGTAHTLFTEDEKHLSGALCNILRGANQP 525 Query: 534 VSPEL 548 V EL Sbjct: 526 VPEEL 530
>RM62_DROME (P19109) ATP-dependent RNA helicase p62 (EC 3.6.1.-)| Length = 719 Score = 155 bits (391), Expect = 1e-37 Identities = 94/208 (45%), Positives = 121/208 (58%), Gaps = 7/208 (3%) Frame = +3 Query: 39 VNIGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQ-----QEPGSKVIIFCSTKRMCD 203 +NIG+ EL AN +I Q V+V K +L +L + PG K+IIF TKR D Sbjct: 487 INIGSL-ELSANHNIRQVVDVCDEFSKEEKLKTLLSDIYDTSESPG-KIIIFVETKRRVD 544 Query: 204 QLSRNLSRQYGA--SAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVV 377 L R + R +G AIHGDKSQ+ERD VL EFR+G+ ILVATDVAARGLDV I+ V+ Sbjct: 545 NLVRFI-RSFGVRCGAIHGDKSQSERDFVLREFRSGKSNILVATDVAARGLDVDGIKYVI 603 Query: 378 NYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVSPELRAM 557 N+D+P EDY+HRIGRTGR+ G ++ FF ++K A LV +L ANQ ++P L + Sbjct: 604 NFDYPQNSEDYIHRIGRTGRSNTKGTSFAFFTKNNAKQAKALVDVLREANQEINPALENL 663 Query: 558 VXXXXXXXXXXXXWASSNDSYGGHGAYG 641 S D GG YG Sbjct: 664 ARN------------SRYDGGGGRSRYG 679
>DBP3_YARLI (Q6C9P3) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 532 Score = 154 bits (389), Expect = 2e-37 Identities = 87/182 (47%), Positives = 112/182 (61%), Gaps = 2/182 (1%) Frame = +3 Query: 9 ASXFAH*PCPVNIGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGS-KVIIFCS 185 A F P V IG DEL ANK ITQ VEV K RL +LRQ K++IF Sbjct: 317 AEGFMKTPTKVMIGERDELAANKRITQSVEVLDPRAKEGRLLDLLRQYANDDFKILIFAL 376 Query: 186 TKRMCDQLSRNLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKD 362 K+ ++ L+R+ YG +AIHGD SQ +R L EF+ G IL+ATDVAARGLD+ + Sbjct: 377 YKKEATRVENTLTRRGYGVAAIHGDLSQQQRTKALDEFKKGEKNILLATDVAARGLDIPN 436 Query: 363 IRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVSP 542 +++V+N FP VEDYVHRIGRTGRAG +G A T F + + + L+ +L GA+Q V Sbjct: 437 VKLVINLTFPLTVEDYVHRIGRTGRAGKTGQAITLFTEHEKHLSGALINVLRGADQPVPD 496 Query: 543 EL 548 EL Sbjct: 497 EL 498
>DBP3_SCHPO (Q10202) ATP-dependent RNA helicase dbp3 (EC 3.6.1.-)| Length = 578 Score = 152 bits (385), Expect = 7e-37 Identities = 86/198 (43%), Positives = 118/198 (59%), Gaps = 16/198 (8%) Frame = +3 Query: 9 ASXFAH*PCPVNIGNTDELVANKSITQYVEVTTS-MEKGRRLDQILRQQEPGS----KVI 173 A+ F P + IG+ DEL A+++ITQ VE+ K R LD +LR+ K++ Sbjct: 363 AATFLKDPVKITIGS-DELAASQNITQIVEILDDPRSKERMLDNLLRKHLSSGGKDDKIL 421 Query: 174 IFCSTKRMCDQLSRNLSRQYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLD 353 IF K+ ++ L+R+Y IHGD SQ R L++F++G+CP+LVATDVAARGLD Sbjct: 422 IFVLYKKEAARVEGTLARKYNVVGIHGDMSQGARLQALNDFKSGKCPVLVATDVAARGLD 481 Query: 354 VKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQ- 530 + +++V+N FP +EDYVHRIGRTGRA G A TFF QD +A +LV +L A Q Sbjct: 482 IPKVQLVINVTFPLTIEDYVHRIGRTGRANTKGTAITFFTPQDKSHAGELVNVLRQAKQD 541 Query: 531 ----------AVSPELRA 554 AV P+L A Sbjct: 542 IPEGLFKFGTAVKPKLNA 559
>DBP2_ASHGO (Q755N4) ATP-dependent RNA helicase DBP2 (EC 3.6.1.-)| Length = 557 Score = 151 bits (382), Expect = 2e-36 Identities = 84/183 (45%), Positives = 116/183 (63%), Gaps = 3/183 (1%) Frame = +3 Query: 9 ASXFAH*PCPVNIGNTDELVANKSITQYVEVTTSMEKGRRLDQILR--QQEPGSKVIIFC 182 A + H P VNIG+ EL A+ +ITQ EV + +K RL + L ++ SK+II Sbjct: 310 ARDYLHDPIQVNIGSL-ELAASHTITQLGEVVSDFDKRDRLVKHLEIGSKDKDSKIIILH 368 Query: 183 STKRMCDQLSRNLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVK 359 STKR CD+++ L + + A AIHG + D L+++RTGR PI+VATDV ARG+DVK Sbjct: 369 STKRTCDEITSYLRQDGWPALAIHGPTPLQDIDCTLNDYRTGRSPIMVATDVVARGIDVK 428 Query: 360 DIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVS 539 I V+NYD P +EDYVHRIGRTGRAGA+G A +FF + + + L+ I+ A Q + Sbjct: 429 GINFVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEANKTLGAQLISIMREAKQEIP 488 Query: 540 PEL 548 +L Sbjct: 489 QDL 491
>DED1_ASPFU (Q4WP13) ATP-dependent RNA helicase ded1 (EC 3.6.1.-)| Length = 674 Score = 149 bits (376), Expect = 8e-36 Identities = 89/206 (43%), Positives = 116/206 (56%), Gaps = 1/206 (0%) Frame = +3 Query: 45 IGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSRNLS 224 +G+T E +ITQ VE +K L IL +IF TKRM D LS L Sbjct: 417 VGSTSE-----NITQKVEYVEDHDKRSVLLDILHTHGTSGLTLIFVETKRMADALSDFLL 471 Query: 225 RQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTGV 401 Q + A+AIHGD++Q ER+ L FR+GRCPILVAT VAARGLD+ ++ V+NYD PT + Sbjct: 472 NQRFPATAIHGDRTQRERERALEMFRSGRCPILVATAVAARGLDIPNVTHVINYDLPTDI 531 Query: 402 EDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVSPELRAMVXXXXXXX 581 +DYVHRIGRTGRAG +GIA FF + +L+ +L+ A+Q V L ++ Sbjct: 532 DDYVHRIGRTGRAGNTGIATAFFNRSNRGVVRELIDLLKEAHQEVPSFLESI-------- 583 Query: 582 XXXXXWASSNDSYGGHGAYGSQTRDG 659 A YGG G G + R G Sbjct: 584 ------AREGSGYGGRGGRGGRGRGG 603
>DED1_ASPOR (Q2UGK3) ATP-dependent RNA helicase ded1 (EC 3.6.1.-)| Length = 675 Score = 148 bits (374), Expect = 1e-35 Identities = 89/204 (43%), Positives = 115/204 (56%), Gaps = 1/204 (0%) Frame = +3 Query: 45 IGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSRNLS 224 +G+T E +ITQ VE +K L IL +IF TKRM D LS L Sbjct: 415 VGSTSE-----NITQKVEYVEDHDKRSVLLDILHTHGTSGLTLIFVETKRMADSLSDFLL 469 Query: 225 RQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTGV 401 Q + A+AIHGD++Q ER+ L FR+GRCPILVAT VAARGLD+ ++ V+NYD PT + Sbjct: 470 NQRFPATAIHGDRTQRERERALEMFRSGRCPILVATAVAARGLDIPNVTHVINYDLPTDI 529 Query: 402 EDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVSPELRAMVXXXXXXX 581 +DYVHRIGRTGRAG +GIA FF + DL+ +L+ A+Q V L ++ Sbjct: 530 DDYVHRIGRTGRAGNTGIATAFFNRGNRGVVRDLIDLLKEAHQEVPSFLESI-------- 581 Query: 582 XXXXXWASSNDSYGGHGAYGSQTR 653 A YGG G G + R Sbjct: 582 ------AREGSGYGGRGGRGGRGR 599
>DDX43_HUMAN (Q9NXZ2) Probable ATP-dependent RNA helicase DDX43 (EC 3.6.1.-)| (DEAD box protein 43) (DEAD box protein HAGE) (Helical antigen) Length = 648 Score = 148 bits (374), Expect = 1e-35 Identities = 80/184 (43%), Positives = 112/184 (60%), Gaps = 1/184 (0%) Frame = +3 Query: 9 ASXFAH*PCPVNIGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCST 188 A + P V +G D LVA S+ Q + VTT EK + L+ KVI+F S Sbjct: 438 AQSYLKEPMIVYVGTLD-LVAVSSVKQNIIVTTEEEKWSHMQTFLQSMSSTDKVIVFVSR 496 Query: 189 KRMCDQLSRNLSR-QYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDI 365 K + D LS +L ++HGD+ Q +R+ L F+TG+ IL+ATD+A+RGLDV D+ Sbjct: 497 KAVADHLSSDLILGNISVESLHGDREQRDREKALENFKTGKVRILIATDLASRGLDVHDV 556 Query: 366 RVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVSPE 545 V N+DFP +E+YVHRIGRTGRAG +G++ T D + AS+L+ ILE ANQ++ E Sbjct: 557 THVYNFDFPRNIEEYVHRIGRTGRAGRTGVSITTLTRNDWRVASELINILERANQSIPEE 616 Query: 546 LRAM 557 L +M Sbjct: 617 LVSM 620
>DBP3_GIBZE (Q4IJH1) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 581 Score = 147 bits (370), Expect = 4e-35 Identities = 79/172 (45%), Positives = 109/172 (63%), Gaps = 5/172 (2%) Frame = +3 Query: 48 GNTDELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGSK----VIIFCSTKRMCDQLSR 215 G EL AN I+Q VEV K RL ++L++ + GSK +++FC K+ ++ Sbjct: 376 GGAVELQANARISQSVEVLEPRGKEFRLLEVLKEHQQGSKKNDRILVFCLYKKEATRIEN 435 Query: 216 NLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFP 392 LSR+ IHGD Q +R L F++G+ P+LVATDVAARGLD+ ++++V+N FP Sbjct: 436 FLSRKGIRVGGIHGDLRQEQRTRSLEAFKSGQTPVLVATDVAARGLDIPEVKLVINVTFP 495 Query: 393 TGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVSPEL 548 +EDYVHRIGRTGRAG +G A TFF +D ++ LV IL GANQ V +L Sbjct: 496 LTIEDYVHRIGRTGRAGKTGQAITFFTVEDKSHSGSLVNILRGANQPVPEDL 547
>DED1_CANGA (Q8TFK8) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 617 Score = 145 bits (366), Expect = 1e-34 Identities = 87/213 (40%), Positives = 122/213 (57%), Gaps = 9/213 (4%) Frame = +3 Query: 45 IGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSRNLS 224 +G+T E +ITQ + + +K L +L + +IF TKRM DQL+ L Sbjct: 370 VGSTSE-----NITQRILYVENRDKNSALLDLLAASND-NLTLIFVETKRMADQLTDFLI 423 Query: 225 RQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTGV 401 Q + A+AIHGD+SQAER+ L+ FR+GR ILVAT VAARGLD+ ++ V+NYD P+ V Sbjct: 424 MQNFSATAIHGDRSQAERERALAAFRSGRANILVATAVAARGLDIPNVTHVINYDLPSDV 483 Query: 402 EDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVSPELRAMVXXXXXXX 581 +DYVHRIGRTGRAG +G+A FF ++ L +ILE ANQ + P L + Sbjct: 484 DDYVHRIGRTGRAGNTGVATAFFNRDNNNIVKGLYEILEEANQEIPPFLEDCLREVSFSR 543 Query: 582 XXXXXWASSNDS--------YGGHGAYGSQTRD 656 N S +GG+G++G +R+ Sbjct: 544 SGSNRSTRGNRSSNTRDYRKHGGNGSFGQNSRN 576
>DBP3_USTMA (Q4PDT1) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 585 Score = 142 bits (358), Expect = 9e-34 Identities = 81/185 (43%), Positives = 112/185 (60%), Gaps = 5/185 (2%) Frame = +3 Query: 9 ASXFAH*PCPVNIGNTDELVANKSITQYVEVTTS-MEKGRRLDQILRQ---QEPGSKVII 176 A F + P V +G+ DEL AN+ + Q VEV K RRL+ LR Q K++I Sbjct: 367 AESFMNGPVRVTVGS-DELSANRRVEQTVEVLADGYAKERRLNDFLRSVNAQRSKDKILI 425 Query: 177 FCSTKRMCDQLSRNLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLD 353 F K+ ++ + L R + S IHGD Q ER + L F++ P+LVATDVAARGLD Sbjct: 426 FALYKKEAQRIEQTLRRGGFKVSGIHGDLGQNERIASLERFKSAETPLLVATDVAARGLD 485 Query: 354 VKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQA 533 + ++ VVNY FP +EDYVHRIGRTGR G +G + TFF + D +A +L+++L+ A+Q Sbjct: 486 IPNVEHVVNYTFPLTIEDYVHRIGRTGRGGKTGKSLTFFTEMDKAHAGELIRVLKDADQK 545 Query: 534 VSPEL 548 V L Sbjct: 546 VPDAL 550
>DED1_NEUCR (Q9P6U9) ATP-dependent RNA helicase ded-1 (EC 3.6.1.-)| Length = 688 Score = 142 bits (358), Expect = 9e-34 Identities = 81/165 (49%), Positives = 106/165 (64%), Gaps = 1/165 (0%) Frame = +3 Query: 45 IGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSRNLS 224 +G+T E +ITQ VE ++K L IL G +IF TKRM D LS L Sbjct: 421 VGSTSE-----NITQKVEYVEDIDKRSVLLDILHTHA-GGLTLIFVETKRMADSLSDFLI 474 Query: 225 RQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTGV 401 Q + A++IHGD++Q ER+ L FR GRCPILVAT VAARGLD+ ++ V+NYD PT + Sbjct: 475 NQNFPATSIHGDRTQRERERALEMFRNGRCPILVATAVAARGLDIPNVTHVINYDLPTDI 534 Query: 402 EDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAV 536 +DYVHRIGRTGRAG +GIA FF + +L+++L+ ANQ V Sbjct: 535 DDYVHRIGRTGRAGNTGIATAFFNRGNRGVVRELLELLKEANQEV 579
>DED1_USTMA (Q4P733) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 672 Score = 142 bits (357), Expect = 1e-33 Identities = 87/212 (41%), Positives = 119/212 (56%), Gaps = 5/212 (2%) Frame = +3 Query: 45 IGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSRNLS 224 +G+T E +ITQ +E +K L +L G +IF TKRM D LS L Sbjct: 417 VGSTSE-----NITQKIEYVEDDDKRSVLLDVLASMPSGGLTLIFVETKRMADMLSDFLL 471 Query: 225 R-QYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTGV 401 R + GA++IHGD++Q ER+ L FR+G+ PI+VAT VAARGLD+ ++ VVNYD P+ V Sbjct: 472 RSKIGATSIHGDRTQRERERALELFRSGKTPIMVATAVAARGLDIPNVTHVVNYDLPSDV 531 Query: 402 EDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVSPELRAMVXXXXXXX 581 +DYVHRIGRTGRAG G A FF + DL+++L+ ANQ V L A+ Sbjct: 532 DDYVHRIGRTGRAGNVGHATAFFNRGNKNIVRDLIELLKEANQEVPQWLEAVARESMFGA 591 Query: 582 XXXXXWASSND-SYGGHGAYG---SQTRDGPS 665 GG ++G ++T +GPS Sbjct: 592 GGGSRGGRGRGRGRGGASSFGNRDARTMNGPS 623
>DED1_GIBZE (Q4I7K4) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 675 Score = 141 bits (356), Expect = 2e-33 Identities = 90/206 (43%), Positives = 117/206 (56%), Gaps = 1/206 (0%) Frame = +3 Query: 45 IGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSRNLS 224 +G+T E +ITQ VE ++K L IL G +IF TKRM D LS L Sbjct: 413 VGSTSE-----NITQKVEYVEDVDKRSVLLDILHSHANGL-TLIFVETKRMADSLSDFLI 466 Query: 225 RQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTGV 401 Q + A++IHGD++Q ER+ L FR GRCPILVAT VAARGLD+ + V+NYD PT V Sbjct: 467 NQNFPATSIHGDRTQRERERALEFFRNGRCPILVATAVAARGLDIPHVTHVINYDLPTDV 526 Query: 402 EDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVSPELRAMVXXXXXXX 581 +DYVHRIGRTGRAG +GIA FF + +L+ +L+ ANQ V L + Sbjct: 527 DDYVHRIGRTGRAGNTGIATAFFNRGNRGIVRELMDLLKEANQEVPAFLETI-------- 578 Query: 582 XXXXXWASSNDSYGGHGAYGSQTRDG 659 + S+GG G G ++R G Sbjct: 579 -------ARESSFGG-GGRGGRSRGG 596
>DBP3_EMENI (Q5AWA6) ATP-dependent RNA helicase dbp3 (EC 3.6.1.-)| Length = 498 Score = 140 bits (354), Expect = 3e-33 Identities = 85/185 (45%), Positives = 111/185 (60%), Gaps = 5/185 (2%) Frame = +3 Query: 9 ASXFAH*PCPVNIGN--TDELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGS--KVII 176 AS F P V IG + + AN I Q VEV EK +RL QIL + + G+ KV+ Sbjct: 269 ASTFMTSPVTVTIGGDPSADPRANSRIKQVVEVVKPHEKEQRLVQILNRHQRGTPDKVLA 328 Query: 177 FCSTKRMCDQLSRNL-SRQYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLD 353 FC K+ ++ R L ++ + + IHGD SQ ER L F++G +LVATDVAARGLD Sbjct: 329 FCLYKKEAMRVERLLRTKGFKVAGIHGDLSQQERFRSLEAFKSGAATVLVATDVAARGLD 388 Query: 354 VKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQA 533 + +++VVN FP VEDYVHRIGRTGRAGA G A T F + D + L+ +L+ ANQ Sbjct: 389 IPHVKLVVNVTFPLTVEDYVHRIGRTGRAGADGHAITLFTETDKAQSGALINVLKAANQE 448 Query: 534 VSPEL 548 V L Sbjct: 449 VPEAL 453
>PRP5_NEUCR (Q7SH33) Pre-mRNA-processing ATP-dependent RNA helicase prp-5 (EC| 3.6.1.-) Length = 1194 Score = 140 bits (352), Expect = 5e-33 Identities = 78/178 (43%), Positives = 105/178 (58%), Gaps = 4/178 (2%) Frame = +3 Query: 36 PVNIGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQ---QEPGSKVIIFCSTKRMCDQ 206 PV I V ITQ VEV +K RL ++L + + + +IF + D Sbjct: 767 PVEITVGGRSVVAPEITQIVEVMDEGKKFNRLLELLGELYADDDDVRSLIFVERQEKADD 826 Query: 207 LSRNLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNY 383 L R L R+ YG +IHG K Q +R+S +S+F+ G CPIL+AT +AARGLDVK +++V+NY Sbjct: 827 LLRELLRRGYGCMSIHGGKDQEDRNSTISDFKKGVCPILIATSIAARGLDVKQLKLVINY 886 Query: 384 DFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVSPELRAM 557 D P +EDYVHR GRTGRAG +G A TF ++ AS + K LE + Q V L M Sbjct: 887 DAPNHLEDYVHRAGRTGRAGNTGTAVTFITEEQENCASGIAKALEQSGQPVPDRLNEM 944
>DED1_ASHGO (Q75B50) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 623 Score = 139 bits (351), Expect = 6e-33 Identities = 88/207 (42%), Positives = 117/207 (56%), Gaps = 3/207 (1%) Frame = +3 Query: 45 IGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSRNLS 224 +G+T E +ITQ V ++K L +L + G ++F TKRM D L+ L Sbjct: 370 VGSTSE-----NITQKVLHVEDIDKRSVLLDLLAASD-GGLTLVFVETKRMADALTDFLI 423 Query: 225 RQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTGV 401 Q A+AIHGD++QAER+ L+ FRTGR +LVAT VAARGLD+ ++ V+NYD P+ + Sbjct: 424 MQNLSATAIHGDRTQAERERALAFFRTGRANVLVATAVAARGLDIPNVTHVINYDLPSDI 483 Query: 402 EDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVSPELRAMVXXXXXXX 581 +DYVHRIGRTGRAG +G+A FF + +LV ILE ANQ V L + Sbjct: 484 DDYVHRIGRTGRAGNTGLATAFFNRGNKNVVKELVDILEEANQEVPSFLSQIAKEMSYGG 543 Query: 582 XXXXXWASSNDSYGGHGAY--GSQTRD 656 S GG G Y G+ TRD Sbjct: 544 ------GGGKSSRGGRGGYSRGNSTRD 564
>PRP5_USTMA (Q4PFD9) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 1156 Score = 139 bits (350), Expect = 8e-33 Identities = 78/205 (38%), Positives = 113/205 (55%), Gaps = 4/205 (1%) Frame = +3 Query: 30 PCPVNIGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQ---QEPGSKVIIFCSTKRMC 200 P + +G + A I Q VEV + K RL +IL + +E ++ +IF + Sbjct: 683 PLEITVGGRSVVAAE--IEQIVEVRSEDTKFHRLLEILGELYNREKDARTLIFVDRQEAA 740 Query: 201 DQLSRNLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVV 377 D L ++L R+ Y ++HG K Q +RD +S+F+ G PI+ AT VAARGLDVK +++V+ Sbjct: 741 DDLLKDLIRKGYVTMSLHGGKDQVDRDETISDFKAGNVPIVTATSVAARGLDVKQLKLVI 800 Query: 378 NYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVSPELRAM 557 NYD P +EDYVHR GRTGRAG G TF + +YA D++ L+ + V PEL AM Sbjct: 801 NYDVPNHMEDYVHRAGRTGRAGQKGTCITFITPEQDRYARDIIAALKASAAHVPPELEAM 860 Query: 558 VXXXXXXXXXXXXWASSNDSYGGHG 632 A+ + +GG G Sbjct: 861 AASFKEKLAAGKAKAAGS-GFGGKG 884
>DED1_CRYNE (Q5KN36) ATP-dependent RNA helicase ded1 (EC 3.6.1.-)| Length = 637 Score = 138 bits (348), Expect = 1e-32 Identities = 84/208 (40%), Positives = 118/208 (56%), Gaps = 1/208 (0%) Frame = +3 Query: 45 IGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSRNL- 221 +G+T E +ITQ VE +K L +L ++ G +++F TKRM D L L Sbjct: 389 VGSTSE-----NITQRVEYVDDQDKRSLLLDLLLAEQSGGLILVFVETKRMADTLCDFLC 443 Query: 222 SRQYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTGV 401 SR++ A++IHGD++Q ER++ L F++GR PILVAT VAARGLD+ ++ V+ YD P V Sbjct: 444 SRRHNATSIHGDRTQREREAALYAFKSGRAPILVATAVAARGLDIPNVTHVILYDLPNDV 503 Query: 402 EDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVSPELRAMVXXXXXXX 581 +Y HRIGRTGRAG G + FF ++ DL+++L+ ANQ V L + Sbjct: 504 AEYTHRIGRTGRAGNVGTSTAFFNRGNTNIGKDLIELLKEANQEVPQWLVEI-------- 555 Query: 582 XXXXXWASSNDSYGGHGAYGSQTRDGPS 665 SS SYGG G G + G S Sbjct: 556 -------SSERSYGGGGGGGYKGSRGRS 576
>PRP5_ASPOR (Q2U2J6) Pre-mRNA-processing ATP-dependent RNA helicase prp5 (EC| 3.6.1.-) Length = 1186 Score = 137 bits (345), Expect = 3e-32 Identities = 81/205 (39%), Positives = 115/205 (56%), Gaps = 6/205 (2%) Frame = +3 Query: 36 PVNIGNTDELVANKSITQYVEVTTSMEKGRRLDQIL-----RQQEPGSKVIIFCSTKRMC 200 PV I V ITQ VEV + +K RL ++L + ++ +IF + Sbjct: 760 PVEIVVGGRSVVAPEITQIVEVRSEDKKFIRLLELLGNLYSTDENEDARALIFVERQEGA 819 Query: 201 DQLSRNLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVV 377 D L R L R+ Y +IHG K Q +RDS + +F+ G P+L+AT VAARGLDVK +++VV Sbjct: 820 DTLLRELMRKGYPCMSIHGGKDQIDRDSTIEDFKAGIFPVLIATSVAARGLDVKQLKLVV 879 Query: 378 NYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVSPELRAM 557 NYD P +EDYVHR GRTGRAG +G A TF + +Y+ D+ K L+ + Q+V ++ M Sbjct: 880 NYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQERYSVDIAKALKQSGQSVPEPVQKM 939 Query: 558 VXXXXXXXXXXXXWASSNDSYGGHG 632 V AS++ +GG G Sbjct: 940 VDSFLEKVKAGKEKASAS-GFGGKG 963
>DED1_KLULA (Q6CLR3) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 627 Score = 137 bits (344), Expect = 4e-32 Identities = 84/207 (40%), Positives = 116/207 (56%), Gaps = 3/207 (1%) Frame = +3 Query: 45 IGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSRNLS 224 +G+T E +ITQ + +K L +L G +IF TKR D L+ L Sbjct: 384 VGSTSE-----NITQKILYVEDFDKNDTLLDLLAASNEGL-TLIFVETKRAADSLTDFLI 437 Query: 225 RQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTGV 401 + + A+AIHGD++Q ER+ LS F+TGR ILVAT VAARGLD+ ++ V+N+D P + Sbjct: 438 MEGFKATAIHGDRTQGERERALSAFKTGRATILVATAVAARGLDIPNVTHVINFDLPNDI 497 Query: 402 EDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVSPELRAMVXXXXXXX 581 +DYVHRIGRTGRAG +G+A TFF + A +LV +L ANQ V L ++ Sbjct: 498 DDYVHRIGRTGRAGNTGVATTFFNRGNKNVAKELVSLLSEANQEVPSFLTTIMREAS--- 554 Query: 582 XXXXXWASSNDSYGGHGAY--GSQTRD 656 + + GG G Y G+ TRD Sbjct: 555 ------SGRGGARGGRGGYNRGNSTRD 575
>DBP3_ASPOR (Q2UMH8) ATP-dependent RNA helicase dbp3 (EC 3.6.1.-)| Length = 498 Score = 136 bits (343), Expect = 5e-32 Identities = 82/187 (43%), Positives = 107/187 (57%), Gaps = 7/187 (3%) Frame = +3 Query: 9 ASXFAH*PCPVNIGN--TDELVANKSITQYVEVTTSMEKGRRLDQILRQQEPG----SKV 170 AS F P V IG + + AN I Q VEV EK RL Q+L + + G KV Sbjct: 277 ASTFMSSPVTVTIGGDPSADPRANTRIKQVVEVVKPHEKESRLVQLLNRSQRGVPEPEKV 336 Query: 171 IIFCSTKRMCDQLSRNL-SRQYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARG 347 + FC K+ ++ R L ++ + + IHGD SQ ER L F+TG +LVATDVAARG Sbjct: 337 LAFCLYKKEAMRIERLLRTKGFKVAGIHGDLSQQERFRSLDAFKTGAATVLVATDVAARG 396 Query: 348 LDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGAN 527 LD+ ++ V+N FP VEDYVHRIGRTGRAGA G A T F + D + L+ +L A Sbjct: 397 LDIPSVKQVINVTFPLTVEDYVHRIGRTGRAGAEGHAVTLFTETDKAQSGALINVLRAAK 456 Query: 528 QAVSPEL 548 Q + +L Sbjct: 457 QDIPEDL 463
>DED1_SCHPO (O13370) ATP-dependent RNA helicase ded1 (EC 3.6.1.-)| Length = 636 Score = 136 bits (343), Expect = 5e-32 Identities = 85/211 (40%), Positives = 117/211 (55%), Gaps = 1/211 (0%) Frame = +3 Query: 45 IGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSRNL- 221 +G+T E +ITQ V EK L IL P +IF TKRM D L+ L Sbjct: 397 VGSTSE-----NITQKVVHVEDSEKRSYLLDILHTLPPEGLTLIFVETKRMADTLTDYLL 451 Query: 222 SRQYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTGV 401 + + A++IHGD++Q ER+ L FR+GR I+VAT VA+RGLD+ ++ V+NYD PT + Sbjct: 452 NSNFPATSIHGDRTQRERERALELFRSGRTSIMVATAVASRGLDIPNVTHVINYDLPTDI 511 Query: 402 EDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVSPELRAMVXXXXXXX 581 +DYVHRIGRTGRAG +G A FF + A +L+++L+ ANQ L AM Sbjct: 512 DDYVHRIGRTGRAGNTGQAVAFFNRNNKGIAKELIELLQEANQECPSFLIAMARESSFGG 571 Query: 582 XXXXXWASSNDSYGGHGAYGSQTRDGPSFQS 674 S GG+ AYG++ P+ S Sbjct: 572 NGRGGRYSGRGGRGGN-AYGARDFRRPTNSS 601
>PRP5_EMENI (Q5BDW4) Pre-mRNA-processing ATP-dependent RNA helicase prp5 (EC| 3.6.1.-) Length = 1173 Score = 136 bits (343), Expect = 5e-32 Identities = 80/205 (39%), Positives = 112/205 (54%), Gaps = 6/205 (2%) Frame = +3 Query: 36 PVNIGNTDELVANKSITQYVEVTTSMEKGRRLDQIL-----RQQEPGSKVIIFCSTKRMC 200 P+ I V ITQ VEV +K RL ++L + ++ +IF + Sbjct: 747 PIEIVVGGRSVVAPEITQIVEVCNEEKKFVRLLELLGNLYSTDENEDARSLIFVDRQEAA 806 Query: 201 DQLSRNLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVV 377 D L R L R+ Y +IHG K Q +RDS + +F+ G P+L+AT VAARGLDVK +++VV Sbjct: 807 DTLLRELMRKGYPCMSIHGGKDQIDRDSTIEDFKAGIFPVLIATSVAARGLDVKQLKLVV 866 Query: 378 NYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVSPELRAM 557 NYD P +EDYVHR GRTGRAG +G A TF + +Y+ D+ K L+ + Q V ++ + Sbjct: 867 NYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQERYSVDIAKALKQSGQEVPEAVQKL 926 Query: 558 VXXXXXXXXXXXXWASSNDSYGGHG 632 V A SN +GG G Sbjct: 927 VDSFLEKVKAGKEKA-SNSGFGGKG 950
>DDX53_HUMAN (Q86TM3) Probable ATP-dependent RNA helicase DDX53 (EC 3.6.1.-)| (DEAD box protein 53) (DEAD box protein CAGE) (Cancer-associated gene protein) Length = 631 Score = 136 bits (342), Expect = 7e-32 Identities = 69/177 (38%), Positives = 107/177 (60%), Gaps = 1/177 (0%) Frame = +3 Query: 30 PCPVNIGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQL 209 P V +GN + LVA ++ Q + VTT EK + + P KVI+F S K + D L Sbjct: 425 PMIVYVGNLN-LVAVNTVKQNIIVTTEKEKRALTQEFVENMSPNDKVIMFVSQKHIADDL 483 Query: 210 SRNLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYD 386 S + + Q A ++HG+ Q++++ + +F++G IL+ TD+ +RGLD+ D+ V NYD Sbjct: 484 SSDFNIQGISAESLHGNSEQSDQERAVEDFKSGNIKILITTDIVSRGLDLNDVTHVYNYD 543 Query: 387 FPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVSPELRAM 557 FP ++ YVHR+G GR G +G + T +DSK A +L+KIL+ ANQ+V +L M Sbjct: 544 FPRNIDVYVHRVGYIGRTGKTGTSVTLITQRDSKMAGELIKILDRANQSVPEDLVVM 600
>DBP3_ASPFU (Q4WH83) ATP-dependent RNA helicase dbp3 (EC 3.6.1.-)| Length = 503 Score = 136 bits (342), Expect = 7e-32 Identities = 76/165 (46%), Positives = 100/165 (60%), Gaps = 5/165 (3%) Frame = +3 Query: 69 ANKSITQYVEVTTSMEKGRRLDQILRQQEPGS----KVIIFCSTKRMCDQLSRNL-SRQY 233 AN I Q VEV EK RL Q+L + + G+ KV++FC K+ ++ R L S+ + Sbjct: 304 ANTRIKQVVEVVKPQEKEARLVQLLSRSQRGAAVGDKVLVFCLYKKEAVRVERLLRSKNF 363 Query: 234 GASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTGVEDYV 413 + IHGD +Q ER L F+TG +LVATDVAARGLD+ +++V+N FP VEDYV Sbjct: 364 KVAGIHGDLNQHERFKSLEAFKTGSATVLVATDVAARGLDIPSVKLVINVTFPLTVEDYV 423 Query: 414 HRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVSPEL 548 HRIGRTGRAGA G A T F + D + L+ +L A Q V L Sbjct: 424 HRIGRTGRAGADGHAITLFTEADKAQSGALINVLRAAKQDVPDAL 468
>DDX46_RAT (Q62780) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-) (DEAD| box protein 46) (Helicase of 117.4 kDa) Length = 1032 Score = 136 bits (342), Expect = 7e-32 Identities = 74/177 (41%), Positives = 103/177 (58%), Gaps = 1/177 (0%) Frame = +3 Query: 30 PCPVNIGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQL 209 P V +G V + Q V V +K +L ++L + VIIF + D L Sbjct: 578 PIEVQVGGRS--VVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGL 635 Query: 210 SRNLSR-QYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYD 386 ++L R Y ++HG Q +RDS++++F+ G C +LVAT VAARGLDVK + +VVNY Sbjct: 636 LKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKHLILVVNYS 695 Query: 387 FPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVSPELRAM 557 P EDYVHR GRTGRAG G AYTF + ++YA D++K LE + AV P+L + Sbjct: 696 CPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDLEKL 752
>DDX46_PONPY (Q5R6D8) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-) (DEAD| box protein 46) Length = 1032 Score = 136 bits (342), Expect = 7e-32 Identities = 74/177 (41%), Positives = 103/177 (58%), Gaps = 1/177 (0%) Frame = +3 Query: 30 PCPVNIGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQL 209 P V +G V + Q V V +K +L ++L + VIIF + D L Sbjct: 578 PIEVQVGGRS--VVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGL 635 Query: 210 SRNLSR-QYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYD 386 ++L R Y ++HG Q +RDS++++F+ G C +LVAT VAARGLDVK + +VVNY Sbjct: 636 LKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKHLILVVNYS 695 Query: 387 FPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVSPELRAM 557 P EDYVHR GRTGRAG G AYTF + ++YA D++K LE + AV P+L + Sbjct: 696 CPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDLEKL 752
>DDX46_MOUSE (Q569Z5) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-) (DEAD| box protein 46) Length = 1032 Score = 136 bits (342), Expect = 7e-32 Identities = 74/177 (41%), Positives = 103/177 (58%), Gaps = 1/177 (0%) Frame = +3 Query: 30 PCPVNIGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQL 209 P V +G V + Q V V +K +L ++L + VIIF + D L Sbjct: 578 PIEVQVGGRS--VVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGL 635 Query: 210 SRNLSR-QYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYD 386 ++L R Y ++HG Q +RDS++++F+ G C +LVAT VAARGLDVK + +VVNY Sbjct: 636 LKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKHLILVVNYS 695 Query: 387 FPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVSPELRAM 557 P EDYVHR GRTGRAG G AYTF + ++YA D++K LE + AV P+L + Sbjct: 696 CPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDLEKL 752
>DDX46_HUMAN (Q7L014) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-) (DEAD| box protein 46) (PRP5 homolog) Length = 1032 Score = 136 bits (342), Expect = 7e-32 Identities = 74/177 (41%), Positives = 103/177 (58%), Gaps = 1/177 (0%) Frame = +3 Query: 30 PCPVNIGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQL 209 P V +G V + Q V V +K +L ++L + VIIF + D L Sbjct: 578 PIEVQVGGRS--VVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGL 635 Query: 210 SRNLSR-QYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYD 386 ++L R Y ++HG Q +RDS++++F+ G C +LVAT VAARGLDVK + +VVNY Sbjct: 636 LKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKHLILVVNYS 695 Query: 387 FPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVSPELRAM 557 P EDYVHR GRTGRAG G AYTF + ++YA D++K LE + AV P+L + Sbjct: 696 CPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDLEKL 752
>PRP5_ASPFU (Q4WT99) Pre-mRNA-processing ATP-dependent RNA helicase prp5 (EC| 3.6.1.-) Length = 1211 Score = 135 bits (341), Expect = 9e-32 Identities = 81/205 (39%), Positives = 112/205 (54%), Gaps = 6/205 (2%) Frame = +3 Query: 36 PVNIGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQ-----QEPGSKVIIFCSTKRMC 200 P+ I + V ITQ VEV K RL +IL ++ +IF + Sbjct: 781 PIEIVVGGKSVVAPEITQIVEVRNEDTKFVRLLEILGNLYSDDANEDARALIFVDRQEAA 840 Query: 201 DQLSRNLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVV 377 D L R L R+ Y +IHG K Q +RDS + +F+ G P+L+AT VAARGLDVK +++VV Sbjct: 841 DTLLRELMRKGYPCMSIHGGKDQIDRDSTIEDFKAGIFPVLIATSVAARGLDVKQLKLVV 900 Query: 378 NYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVSPELRAM 557 NYD P +EDYVHR GRTGRAG +G A TF ++ +Y+ D+ K L + Q V ++ M Sbjct: 901 NYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEEQERYSVDIAKALRQSGQKVPEPVQKM 960 Query: 558 VXXXXXXXXXXXXWASSNDSYGGHG 632 V AS++ +GG G Sbjct: 961 VDSFLEKVKAGKEKASAS-GFGGKG 984
>HE64_TRYBB (Q26696) Putative DEAD-box RNA helicase HEL64 (EC 3.6.1.-)| Length = 568 Score = 135 bits (339), Expect = 1e-31 Identities = 75/171 (43%), Positives = 105/171 (61%), Gaps = 5/171 (2%) Frame = +3 Query: 39 VNIGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSRN 218 +++G+T EL ANK +TQ +T K L +++ Q+ +V++FC KR D+L R Sbjct: 307 ISVGST-ELQANKDVTQRFILTQEFAKQDELRKLM-QEHREERVLVFCKMKRTADELERQ 364 Query: 219 LSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPT 395 L R Y A AIHGDK Q +R+ +L+ FR LVATDVAARGLD+K + V+NYDFP Sbjct: 365 LRRWGYDAMAIHGDKEQRQREFILARFRKDPRLCLVATDVAARGLDIKQLETVINYDFPM 424 Query: 396 GVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYA----SDLVKILEGANQAV 536 ++DYVHRIGRTGRAG G ++++ +L+ ILE A Q + Sbjct: 425 QIDDYVHRIGRTGRAGGEGRCVYLITKKEAQITPSVLKELIGILERAQQEI 475
>DBP1_YEAST (P24784) ATP-dependent RNA helicase DBP1 (EC 3.6.1.-) (DEAD box| protein 1) (Helicase CA1) Length = 617 Score = 134 bits (338), Expect = 2e-31 Identities = 84/210 (40%), Positives = 119/210 (56%), Gaps = 10/210 (4%) Frame = +3 Query: 45 IGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSRNLS 224 +G+T E +ITQ + M+K L +L + G +IF TKRM DQL+ L Sbjct: 379 VGSTSE-----NITQRILYVDDMDKKSALLDLLSAEHKGL-TLIFVETKRMADQLTDFLI 432 Query: 225 RQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTGV 401 Q + A+AIHGD++QAER+ LS F+ ILVAT VAARGLD+ ++ V+NYD P+ + Sbjct: 433 MQNFKATAIHGDRTQAERERALSAFKANVADILVATAVAARGLDIPNVTHVINYDLPSDI 492 Query: 402 EDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVS---PELRAMVXXXX 572 +DYVHRIGRTGRAG +G+A +FF + L++IL ANQ V +L Sbjct: 493 DDYVHRIGRTGRAGNTGVATSFFNSNNQNIVKGLMEILNEANQEVPTFLSDLSRQNSRGG 552 Query: 573 XXXXXXXXWASSND------SYGGHGAYGS 644 + S N+ +GG+G++GS Sbjct: 553 RTRGGGGFFNSRNNGSRDYRKHGGNGSFGS 582
>DBP3_NEUCR (Q7S5R1) ATP-dependent RNA helicase dbp-3 (EC 3.6.1.-)| Length = 614 Score = 134 bits (336), Expect = 3e-31 Identities = 74/168 (44%), Positives = 104/168 (61%), Gaps = 5/168 (2%) Frame = +3 Query: 60 ELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGS----KVIIFCSTKRMCDQLSRNLSR 227 EL AN I Q VEV K RL ++L++ + GS ++++FC K+ ++ + LSR Sbjct: 413 ELQANSRIEQKVEVVDPRGKEFRLYELLKEAQKGSQKDDRILVFCLYKKEAVRVEQFLSR 472 Query: 228 Q-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTGVE 404 + ++IHGD Q +R L F++G +LVATDVAARGLD+ ++++V+N FP +E Sbjct: 473 KGIKVASIHGDLRQDQRTRSLEAFKSGTTTVLVATDVAARGLDIPEVKLVINVTFPLTIE 532 Query: 405 DYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVSPEL 548 DYVHRIGRTGRAG G A T F + D ++ LV IL A Q V EL Sbjct: 533 DYVHRIGRTGRAGKLGKAITLFTEHDKAHSGSLVNILRAAKQPVPEEL 580
>DED1_YEAST (P06634) ATP-dependent RNA helicase DED1 (EC 3.6.1.-) (DEAD box| protein 1) Length = 604 Score = 133 bits (335), Expect = 4e-31 Identities = 78/170 (45%), Positives = 107/170 (62%), Gaps = 1/170 (0%) Frame = +3 Query: 45 IGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSRNLS 224 +G+T E +ITQ V + +K L +L G +IF TKRM DQL+ L Sbjct: 367 VGSTSE-----NITQKVLYVENQDKKSALLDLLSASTDGL-TLIFVETKRMADQLTDFLI 420 Query: 225 RQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTGV 401 Q + A+AIHGD++Q+ER+ L+ FR+G +LVAT VAARGLD+ ++ V+NYD P+ V Sbjct: 421 MQNFRATAIHGDRTQSERERALAAFRSGAATLLVATAVAARGLDIPNVTHVINYDLPSDV 480 Query: 402 EDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVSPELR 551 +DYVHRIGRTGRAG +G+A FF ++S L +IL ANQ V L+ Sbjct: 481 DDYVHRIGRTGRAGNTGLATAFFNSENSNIVKGLHEILTEANQEVPSFLK 530
>DED1_DEBHA (Q6BU54) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 630 Score = 133 bits (335), Expect = 4e-31 Identities = 83/195 (42%), Positives = 108/195 (55%), Gaps = 1/195 (0%) Frame = +3 Query: 45 IGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSRNLS 224 +G+T E +ITQ + EK L +L + G IIF TKRM D L+ L Sbjct: 381 VGSTSE-----NITQKILYVEDEEKKSVLLDLLSANDNGL-TIIFTETKRMADNLADFLY 434 Query: 225 RQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTGV 401 Q + A+AIHGD+SQ ER+ L+ F+TG PILVAT VAARGLD+ ++ +VNYD P+ + Sbjct: 435 DQGFPATAIHGDRSQYEREKALAAFKTGTAPILVATAVAARGLDIPNVSHIVNYDLPSDI 494 Query: 402 EDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVSPELRAMVXXXXXXX 581 +DYVHRIGRTGRAG GIA FF + LV +L ANQ + P+ + Sbjct: 495 DDYVHRIGRTGRAGNIGIATAFFNRNNKNIVKGLVDLLTEANQEI-PDFLNKIARESAFG 553 Query: 582 XXXXXWASSNDSYGG 626 SS GG Sbjct: 554 GKSMRGGSSRGGRGG 568
>VASA_DROME (P09052) ATP-dependent RNA helicase vasa (EC 3.6.1.-) (Antigen| Mab46F11) Length = 661 Score = 132 bits (332), Expect = 1e-30 Identities = 72/163 (44%), Positives = 107/163 (65%), Gaps = 2/163 (1%) Frame = +3 Query: 69 ANKSITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSRNLS-RQYGASA 245 A + Q + K +L +IL +Q G+ I+F TKR D L+ LS +++ ++ Sbjct: 461 ACSDVKQTIYEVNKYAKRSKLIEILSEQADGT--IVFVETKRGADFLASFLSEKEFPTTS 518 Query: 246 IHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTGVEDYVHRIG 425 IHGD+ Q++R+ L +F+ G +L+AT VA+RGLD+K+I+ V+NYD P+ ++DYVHRIG Sbjct: 519 IHGDRLQSQREQALRDFKNGSMKVLIATSVASRGLDIKNIKHVINYDMPSKIDDYVHRIG 578 Query: 426 RTGRAGASGIAYTFF-CDQDSKYASDLVKILEGANQAVSPELR 551 RTGR G +G A +FF ++D A+DLVKILEG+ Q V LR Sbjct: 579 RTGRVGNNGRATSFFDPEKDRAIAADLVKILEGSGQTVPDFLR 621
>DED1_CANAL (Q5A4E2) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 672 Score = 132 bits (331), Expect = 1e-30 Identities = 76/165 (46%), Positives = 101/165 (61%), Gaps = 1/165 (0%) Frame = +3 Query: 45 IGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSRNLS 224 +G+T E +ITQ + EK + +L E G I+F TKRM D L+ L Sbjct: 411 VGSTSE-----NITQKILYVEDDEKKSVILDLLSANENGL-TIVFTETKRMADNLADYLY 464 Query: 225 RQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTGV 401 Q + A+AIHGD+SQ ER+ L+ F+ G PILVAT VAARGLD+ ++ V+NYD P+ + Sbjct: 465 DQGFPATAIHGDRSQYEREKALAAFKNGAAPILVATAVAARGLDIPNVSHVINYDLPSDI 524 Query: 402 EDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAV 536 +DYVHRIGRTGRAG GIA FF + L+++L ANQ V Sbjct: 525 DDYVHRIGRTGRAGNVGIATAFFNRNNKNVVKGLIELLSEANQEV 569
>DDX46_BRARE (Q4TVV3) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-) (DEAD| box protein 46) Length = 1018 Score = 131 bits (330), Expect = 2e-30 Identities = 74/200 (37%), Positives = 107/200 (53%), Gaps = 1/200 (0%) Frame = +3 Query: 36 PVNIGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSR 215 PV + V + Q+V V +K +L +IL + VIIF + D L + Sbjct: 546 PVEVQVGGRSVVCSDVEQHVIVIEEEKKFLKLLEILGHYQEKGSVIIFVDKQEHADGLLK 605 Query: 216 NLSR-QYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFP 392 +L + Y ++HG Q +RDS++++F+ G C +LVAT VAARGLDVK + +VVNY P Sbjct: 606 DLMKASYPCMSLHGGIDQYDRDSIINDFKNGACRLLVATSVAARGLDVKQLILVVNYSCP 665 Query: 393 TGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVSPELRAMVXXXX 572 EDYVHR GRTGRAG G AYTF + ++Y+ D++K LE + +V EL + Sbjct: 666 NHYEDYVHRAGRTGRAGNKGYAYTFITEGQARYSGDILKALELSGSSVPAELEQLWTNFK 725 Query: 573 XXXXXXXXWASSNDSYGGHG 632 S+ + G G Sbjct: 726 EQQKAEGKIIKSSSGFSGKG 745
>DDX3Y_HUMAN (O15523) ATP-dependent RNA helicase DDX3Y (EC 3.6.1.-) (DEAD box| protein 3, Y-chromosomal) Length = 660 Score = 131 bits (330), Expect = 2e-30 Identities = 80/208 (38%), Positives = 114/208 (54%), Gaps = 1/208 (0%) Frame = +3 Query: 45 IGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSRNLS 224 +G+T E +ITQ V ++K L IL S ++F TK+ D L L Sbjct: 406 VGSTSE-----NITQKVVWVEDLDKRSFLLDILGATGSDSLTLVFVETKKGADSLEDFLY 460 Query: 225 RQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTGV 401 + Y ++IHGD+SQ +R+ L +FR+G+ PILVAT VAARGLD+ ++R V+N+D P+ + Sbjct: 461 HEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVRHVINFDLPSDI 520 Query: 402 EDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVSPELRAMVXXXXXXX 581 E+YVHRIGRTGR G G+A +FF +++ DL+ +L A Q V L M Sbjct: 521 EEYVHRIGRTGRVGNLGLATSFFNEKNMNITKDLLDLLVEAKQEVPSWLENMAYEHHYKG 580 Query: 582 XXXXXWASSNDSYGGHGAYGSQTRDGPS 665 + SN GG GA + G S Sbjct: 581 GSRGR-SKSNRFSGGFGARDYRQSSGSS 607
>PRP11_SCHPO (Q9P7C7) Pre-mRNA-processing ATP-dependent RNA helicase prp11 (EC| 3.6.1.-) Length = 1014 Score = 131 bits (330), Expect = 2e-30 Identities = 72/178 (40%), Positives = 105/178 (58%), Gaps = 4/178 (2%) Frame = +3 Query: 36 PVNIGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQ---QEPGSKVIIFCSTKRMCDQ 206 PV I V + Q VEV K RL ++L + + + ++F + D Sbjct: 624 PVEITVGGRSVVASEVEQIVEVRPEESKFSRLLELLGELYNNQLDVRTLVFVDRQESADA 683 Query: 207 LSRNL-SRQYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNY 383 L +L R Y +++IHG K Q +RDS +S+++ G +L+AT V ARGLDVK +++VVNY Sbjct: 684 LLSDLMKRGYTSNSIHGGKDQHDRDSTISDYKAGVFDVLIATSVVARGLDVKSLQLVVNY 743 Query: 384 DFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVSPELRAM 557 D P +EDYVHR+GRTGRAG +G+A TF + KYA D+ K L+ + Q V EL+ + Sbjct: 744 DCPNHMEDYVHRVGRTGRAGHTGVAVTFITPEQEKYAVDIAKALKMSKQPVPKELQTL 801
>DDX3Y_PANTR (Q6GVM6) ATP-dependent RNA helicase DDX3Y (EC 3.6.1.-) (DEAD box| protein 3, Y-chromosomal) Length = 660 Score = 131 bits (329), Expect = 2e-30 Identities = 80/208 (38%), Positives = 114/208 (54%), Gaps = 1/208 (0%) Frame = +3 Query: 45 IGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSRNLS 224 +G+T E +ITQ V ++K L IL S ++F TK+ D L L Sbjct: 406 VGSTSE-----NITQKVVWVEDLDKRSFLLDILGAAGTDSLTLVFVETKKGADSLEDFLY 460 Query: 225 RQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTGV 401 + Y ++IHGD+SQ +R+ L +FR+G+ PILVAT VAARGLD+ ++R V+N+D P+ + Sbjct: 461 HEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVRHVINFDLPSDI 520 Query: 402 EDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVSPELRAMVXXXXXXX 581 E+YVHRIGRTGR G G+A +FF +++ DL+ +L A Q V L M Sbjct: 521 EEYVHRIGRTGRVGNLGLATSFFNEKNINITKDLLDLLVEAKQEVPSWLENMAYEHQYKG 580 Query: 582 XXXXXWASSNDSYGGHGAYGSQTRDGPS 665 + SN GG GA + G S Sbjct: 581 GSRGR-SKSNRFSGGFGARDYRQSSGSS 607
>DDX3X_MOUSE (Q62167) ATP-dependent RNA helicase DDX3X (EC 3.6.1.-) (DEAD box| protein 3, X-chromosomal) (DEAD box RNA helicase DEAD3) (mDEAD3) (Embryonic RNA helicase) (D1Pas1-related sequence 2) Length = 661 Score = 130 bits (328), Expect = 3e-30 Identities = 80/211 (37%), Positives = 115/211 (54%), Gaps = 1/211 (0%) Frame = +3 Query: 45 IGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSRNLS 224 +G+T E +ITQ V ++K L +L S ++F TK+ D L L Sbjct: 407 VGSTSE-----NITQKVVWVEEIDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLY 461 Query: 225 RQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTGV 401 + Y ++IHGD+SQ +R+ L +FR+G+ PILVAT VAARGLD+ +++ V+N+D P+ + Sbjct: 462 HEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDI 521 Query: 402 EDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVSPELRAMVXXXXXXX 581 E+YVHRIGRTGR G G+A +FF +++ DL+ +L A Q V L M Sbjct: 522 EEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVPSWLENMAFEHHYKG 581 Query: 582 XXXXXWASSNDSYGGHGAYGSQTRDGPSFQS 674 SS S GG GA + G S S Sbjct: 582 SSRGRSKSSRFS-GGFGARDYRQSSGASSSS 611
>PRP28_NEUCR (Q7SEL0) Pre-mRNA splicing ATP-dependent RNA helicase prp-28 (EC| 3.6.1.-) Length = 728 Score = 130 bits (328), Expect = 3e-30 Identities = 71/181 (39%), Positives = 109/181 (60%), Gaps = 2/181 (1%) Frame = +3 Query: 9 ASXFAH*PCPVNIGNTDELVANKSITQYVEVTTSMEKGR-RLDQILRQQEPGSKVIIFCS 185 A + P V IGN E V ++ Q VE + +K + RL +IL + +I+F + Sbjct: 517 AKKYLRRPAIVTIGNAGEAV--DTVEQRVEFVSGEDKRKKRLQEILNSGQFKPPIIVFVN 574 Query: 186 TKRMCDQLSRNLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKD 362 KR CD ++R++ Y A +HG K+Q +R++ L+ R G+ ILVATD+A RG+DV D Sbjct: 575 IKRNCDMVARDIKGMGYSAVTLHGSKTQEQREAALASLRNGQTDILVATDLAGRGIDVPD 634 Query: 363 IRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVSP 542 + +VVN++ T +E Y HRIGRTGRAG SG+A TF +D+ DL +I+ ++ + P Sbjct: 635 VSLVVNFNMATNIESYTHRIGRTGRAGKSGVAITFLGPEDNDVLYDLRQIISKSSISKVP 694 Query: 543 E 545 + Sbjct: 695 D 695
>PRP28_GIBZE (Q4I7F9) Pre-mRNA splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 721 Score = 130 bits (328), Expect = 3e-30 Identities = 71/181 (39%), Positives = 108/181 (59%), Gaps = 2/181 (1%) Frame = +3 Query: 9 ASXFAH*PCPVNIGNTDELVANKSITQYVEVTTSMEKGR-RLDQILRQQEPGSKVIIFCS 185 A + P V IGN E V ++ Q VE + ++ + RL +IL G +I+F + Sbjct: 512 AKKYLRRPAIVTIGNAGEAV--DTVEQRVEFVSGEDRRKKRLQEILSSGNFGPPIIVFVN 569 Query: 186 TKRMCDQLSRNLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKD 362 KR CD ++R++ + + A +HG K+Q +R++ L R G +LVATD+A RG+DV D Sbjct: 570 IKRNCDAVARDIKQMGWSAVTLHGSKTQEQREAALGSVRAGHTQVLVATDLAGRGIDVPD 629 Query: 363 IRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVSP 542 + +VVN++ T +E Y HRIGRTGRAG SG+A TF +D + DL +IL ++ + P Sbjct: 630 VSLVVNFNMATNIESYTHRIGRTGRAGKSGVAITFLGPEDHETMYDLKQILSKSSISKVP 689 Query: 543 E 545 E Sbjct: 690 E 690
>PRP5_GIBZE (Q4IP34) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 1227 Score = 130 bits (328), Expect = 3e-30 Identities = 73/180 (40%), Positives = 103/180 (57%), Gaps = 4/180 (2%) Frame = +3 Query: 30 PCPVNIGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQ---QEPGSKVIIFCSTKRMC 200 P V +G V K I Q VEV K R+ ++L + ++ ++ +IF + Sbjct: 803 PIEVTVGGRS--VVAKEIEQIVEVRDEPSKFHRVLELLGELYDRDEDARTLIFVERQEKA 860 Query: 201 DQLSRNLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVV 377 D L + L + Y +IHG K Q +RDS +S+F+ G PIL+AT VAARGLDVK +++V+ Sbjct: 861 DDLLKELMMKGYPCMSIHGGKDQIDRDSTISDFKKGVVPILIATSVAARGLDVKQLKLVI 920 Query: 378 NYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVSPELRAM 557 NYD P +EDYVHR GRTGRAG +G+A TF + A + K LE + Q + L M Sbjct: 921 NYDAPNHLEDYVHRAGRTGRAGNTGVAVTFVTPEQENCAPGIAKALEQSGQPIPDRLNEM 980
>DDX3Y_MOUSE (Q62095) ATP-dependent RNA helicase DDX3Y (EC 3.6.1.-) (DEAD box| protein 3, Y-chromosomal) (DEAD-box RNA helicase DEAD2) (mDEAD2) (D1Pas1-related sequence 1) Length = 658 Score = 130 bits (327), Expect = 4e-30 Identities = 71/172 (41%), Positives = 106/172 (61%), Gaps = 1/172 (0%) Frame = +3 Query: 45 IGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSRNLS 224 +G+T E +ITQ V ++K L +L S ++F TK+ D L L Sbjct: 407 VGSTSE-----NITQKVVWVEELDKRSFLLDLLNATGKDSLTLVFVETKKGADSLENFLF 461 Query: 225 RQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTGV 401 ++ Y ++IHGD+SQ +R+ L +FR+GR PILVAT VAARGLD+ +++ V+N+D P+ + Sbjct: 462 QERYACTSIHGDRSQKDREEALHQFRSGRKPILVATAVAARGLDISNVKHVINFDLPSDI 521 Query: 402 EDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVSPELRAM 557 E+YVHRIGRTGR G G+A +FF +++ DL+ +L A Q V L +M Sbjct: 522 EEYVHRIGRTGRVGNLGLATSFFNERNLNITKDLLDLLVEAKQEVPSWLESM 573
>AN3_XENLA (P24346) Putative ATP-dependent RNA helicase an3 (EC 3.6.1.-)| Length = 697 Score = 130 bits (326), Expect = 5e-30 Identities = 81/213 (38%), Positives = 116/213 (54%), Gaps = 3/213 (1%) Frame = +3 Query: 45 IGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSRNLS 224 +G+T E +ITQ V M+K L +L S ++F TK+ D L L Sbjct: 449 VGSTSE-----NITQKVVWVEEMDKRSFLLDLLNATGKDSLTLVFVETKKGADALEDFLY 503 Query: 225 RQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTGV 401 + Y ++IHGD+SQ +R+ L +FR+G+ PILVAT VAARGLD+ +++ V+N+D P+ + Sbjct: 504 HEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDI 563 Query: 402 EDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVSPELRAMVXXXXXXX 581 E+YVHRIGRTGR G G+A +FF +++ DL+ +L A Q V L M Sbjct: 564 EEYVHRIGRTGRVGNLGLATSFFNEKNINITKDLLDLLVEAKQEVPSWLENMAYEQHHKS 623 Query: 582 XXXXXWASSNDSYGGHGA--YGSQTRDGPSFQS 674 S + GG GA Y + G SF S Sbjct: 624 SSRG--RSKSRFSGGFGAKDYRQSSGAGSSFGS 654
>DDX3X_HUMAN (O00571) ATP-dependent RNA helicase DDX3X (EC 3.6.1.-) (DEAD box| protein 3, X-chromosomal) (Helicase-like protein 2) (HLP2) (DEAD box, X isoform) Length = 661 Score = 130 bits (326), Expect = 5e-30 Identities = 80/211 (37%), Positives = 114/211 (54%), Gaps = 1/211 (0%) Frame = +3 Query: 45 IGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSRNLS 224 +G+T E +ITQ V +K L +L S ++F TK+ D L L Sbjct: 407 VGSTSE-----NITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLY 461 Query: 225 RQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTGV 401 + Y ++IHGD+SQ +R+ L +FR+G+ PILVAT VAARGLD+ +++ V+N+D P+ + Sbjct: 462 HEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDI 521 Query: 402 EDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVSPELRAMVXXXXXXX 581 E+YVHRIGRTGR G G+A +FF +++ DL+ +L A Q V L M Sbjct: 522 EEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVPSWLENMAYEHHYKG 581 Query: 582 XXXXXWASSNDSYGGHGAYGSQTRDGPSFQS 674 SS S GG GA + G S S Sbjct: 582 SSRGRSKSSRFS-GGFGARDYRQSSGASSSS 611
>PL10_MOUSE (P16381) Putative ATP-dependent RNA helicase Pl10 (EC 3.6.1.-)| Length = 660 Score = 128 bits (321), Expect = 2e-29 Identities = 78/211 (36%), Positives = 114/211 (54%), Gaps = 1/211 (0%) Frame = +3 Query: 45 IGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSRNLS 224 +G+T E +ITQ V +K L +L S +++F TK+ D L L Sbjct: 407 VGSTSE-----NITQKVVWVEEADKRSFLLDLLNATGKDSLILVFVETKKGADSLEDFLY 461 Query: 225 RQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTGV 401 + Y ++IHGD+SQ +R+ L +FR+G+ PILVAT VAARGLD+ +++ V+N+D P+ + Sbjct: 462 HEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDI 521 Query: 402 EDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVSPELRAMVXXXXXXX 581 E+YVHRIGRTGR G G+A +FF +++ DL+ +L A Q V L M Sbjct: 522 EEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVPSWLENMAFEHHYKG 581 Query: 582 XXXXXWASSNDSYGGHGAYGSQTRDGPSFQS 674 S + GG GA + G S S Sbjct: 582 GSRG--RSKSRFSGGFGARDYRQSSGASSSS 610
>DDX23_PONPY (Q5RC67) Probable ATP-dependent RNA helicase DDX23 (EC 3.6.1.-) (DEAD| box protein 23) Length = 820 Score = 128 bits (321), Expect = 2e-29 Identities = 76/183 (41%), Positives = 110/183 (60%), Gaps = 3/183 (1%) Frame = +3 Query: 9 ASXFAH*PCPVNIGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQQ-EPGSKVIIFCS 185 A + P V IG+ + ++ + Q V + + EK ++L IL Q +P +IIF + Sbjct: 617 ARSYLRRPAVVYIGSAGK--PHERVEQKVFLMSESEKRKKLLAILEQGFDP--PIIIFVN 672 Query: 186 TKRMCDQLSRNLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKD 362 K+ CD L+++L + Y A +HG K Q +R+ LS + G ILVATDVA RG+D++D Sbjct: 673 QKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQD 732 Query: 363 IRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVK-ILEGANQAVS 539 + +VVNYD +EDY+HRIGRTGRAG SG+A TF +DS +L + ILE + Sbjct: 733 VSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAILESPVSSCP 792 Query: 540 PEL 548 PEL Sbjct: 793 PEL 795
>DDX23_HUMAN (Q9BUQ8) Probable ATP-dependent RNA helicase DDX23 (EC 3.6.1.-) (DEAD| box protein 23) (100 kDa U5 snRNP-specific protein) (U5-100kD) (PRP28 homolog) Length = 820 Score = 128 bits (321), Expect = 2e-29 Identities = 76/183 (41%), Positives = 110/183 (60%), Gaps = 3/183 (1%) Frame = +3 Query: 9 ASXFAH*PCPVNIGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQQ-EPGSKVIIFCS 185 A + P V IG+ + ++ + Q V + + EK ++L IL Q +P +IIF + Sbjct: 617 ARSYLRRPAVVYIGSAGK--PHERVEQKVFLMSESEKRKKLLAILEQGFDP--PIIIFVN 672 Query: 186 TKRMCDQLSRNLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKD 362 K+ CD L+++L + Y A +HG K Q +R+ LS + G ILVATDVA RG+D++D Sbjct: 673 QKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQD 732 Query: 363 IRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVK-ILEGANQAVS 539 + +VVNYD +EDY+HRIGRTGRAG SG+A TF +DS +L + ILE + Sbjct: 733 VSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAILESPVSSCP 792 Query: 540 PEL 548 PEL Sbjct: 793 PEL 795
>DDX3Y_PONPY (Q5RF43) ATP-dependent RNA helicase DDX3Y (EC 3.6.1.-) (DEAD box| protein 3, Y-chromosomal) Length = 658 Score = 128 bits (321), Expect = 2e-29 Identities = 71/172 (41%), Positives = 104/172 (60%), Gaps = 1/172 (0%) Frame = +3 Query: 45 IGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSRNLS 224 +G+T E +ITQ V ++K L +L S ++F TK+ D L L Sbjct: 406 VGSTSE-----NITQKVVWVEDLDKRSFLLDLLGATGRDSLTLVFVETKKGADSLEDFLY 460 Query: 225 RQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTGV 401 + Y ++IHGD+SQ +R+ L +FR+G+ PILVAT VAARGLD+ ++R V+N+D P+ + Sbjct: 461 HEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVRHVINFDLPSDI 520 Query: 402 EDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVSPELRAM 557 E+YVHRIGRTGR G G+A +FF +++ DL+ +L A Q V L M Sbjct: 521 EEYVHRIGRTGRVGNLGLATSFFNEKNMNITKDLLDLLVEAKQEVPSWLENM 572
>PRP5_CRYNE (Q5KME7) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 1072 Score = 128 bits (321), Expect = 2e-29 Identities = 71/183 (38%), Positives = 101/183 (55%), Gaps = 7/183 (3%) Frame = +3 Query: 30 PCPVNIGNTDELVANKSITQYVEVTTSMEKGRRLDQIL------RQQEPGSKVIIFCSTK 191 P + +G V I Q VEV K RL +IL + E + +IF + Sbjct: 609 PLEITVGGRS--VVAPEIDQRVEVRDGDTKFTRLLEILGEMGEEHKDEDDFRTLIFVDRQ 666 Query: 192 RMCDQLSRNL-SRQYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIR 368 D L R L R Y +++HG K Q +RD + F+ G PI+VAT VAARGLDVK+++ Sbjct: 667 ESADDLFRELLQRGYVCASLHGGKEQVDRDEAIKNFKNGDVPIIVATSVAARGLDVKELK 726 Query: 369 VVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVSPEL 548 +V+NYD P +EDYVHR GRTGRAG G TF + +++ D+V+ LE + + +L Sbjct: 727 LVINYDAPNHMEDYVHRAGRTGRAGNKGTCITFITPEQERFSVDIVRALEASKAFIPDDL 786 Query: 549 RAM 557 + M Sbjct: 787 KKM 789
>DED1_YARLI (Q6CB69) ATP-dependent RNA helicase DED1 (EC 3.6.1.-)| Length = 618 Score = 127 bits (320), Expect = 2e-29 Identities = 86/206 (41%), Positives = 112/206 (54%), Gaps = 1/206 (0%) Frame = +3 Query: 45 IGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSRNL- 221 +G+T E +ITQ VE +K L IL G ++F TKR D L L Sbjct: 386 VGSTSE-----NITQKVEYVEDGDKISALLDILSAAGKGL-TLVFVETKRGADYLCDVLQ 439 Query: 222 SRQYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTGV 401 S + A++IHGD+SQ +R+ L FR G PILVAT VAARGLD+ ++ VVNYD PT + Sbjct: 440 SEDFPATSIHGDRSQRDRERALEMFRDGTTPILVATAVAARGLDIPNVTHVVNYDLPTDI 499 Query: 402 EDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVSPELRAMVXXXXXXX 581 +DYVHRIGRTGRAG +GIA FF + +L+ IL+ A+Q V L + Sbjct: 500 DDYVHRIGRTGRAGNTGIATAFFNRGNKGIVRELIDILKEAHQDVPQFLES--------- 550 Query: 582 XXXXXWASSNDSYGGHGAYGSQTRDG 659 + SYGG G G + R G Sbjct: 551 ------TAREASYGGRG--GGRGRGG 568
>PRP28_ASPOR (Q2UH00) Pre-mRNA splicing ATP-dependent RNA helicase prp28 (EC| 3.6.1.-) Length = 803 Score = 126 bits (316), Expect = 7e-29 Identities = 74/207 (35%), Positives = 116/207 (56%), Gaps = 4/207 (1%) Frame = +3 Query: 30 PCPVNIGNTDELVANKSITQYVEVTTSMEKGR-RLDQILRQQEPGSKVIIFCSTKRMCDQ 206 P V IG+ E V ++ Q VE +K + RL IL E +I+F + KR CD Sbjct: 600 PAIVTIGSAGEAV--DTVEQRVEFIAGEDKRKKRLGDILSSGEFRPPIIVFVNIKRNCDA 657 Query: 207 LSRNLSRQYGASAI--HGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVN 380 ++R + +Q+G S++ HG K+Q +R++ L+ R G+ +LVATD+A RG+DV D+ +V+N Sbjct: 658 IAREI-KQWGFSSVTLHGSKTQEQREAALASVRNGQTDVLVATDLAGRGIDVPDVSLVIN 716 Query: 381 YDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVK-ILEGANQAVSPELRAM 557 ++ T +E Y HRIGRTGRAG SG+A TF ++D+ DL + I++ + + ELR Sbjct: 717 FNMATTIESYTHRIGRTGRAGKSGVAITFLGNEDTDVMYDLKQMIMKSSISRLPEELRKH 776 Query: 558 VXXXXXXXXXXXXWASSNDSYGGHGAY 638 N ++G G + Sbjct: 777 EAAQSKPTRGFAKKNDDNSAFGSKGGW 803
>DDX4_MOUSE (Q61496) Probable ATP-dependent RNA helicase DDX4 (EC 3.6.1.-)| (DEAD box protein 4) (VASA homolog) (Mvh) Length = 702 Score = 124 bits (311), Expect = 3e-28 Identities = 65/158 (41%), Positives = 100/158 (63%), Gaps = 2/158 (1%) Frame = +3 Query: 69 ANKSITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSRNLSRQ-YGASA 245 A + + Q + K +L +ILR + ++F TK+ D ++ L ++ ++ Sbjct: 484 ACRDVQQTILQVGQYSKREKLVEILRNIGD-ERTMVFVETKKKADFIATFLCQEKISTTS 542 Query: 246 IHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTGVEDYVHRIG 425 IHGD+ Q ER+ L +FR G+CP+LVAT VAARGLD+++++ V+N+D P+ +++YVHRIG Sbjct: 543 IHGDREQREREQALGDFRCGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIG 602 Query: 426 RTGRAGASGIAYTFF-CDQDSKYASDLVKILEGANQAV 536 RTGR G +G A +FF D D+ A LVK+L A Q V Sbjct: 603 RTGRCGNTGRAISFFDTDSDNHLAQPLVKVLSDAQQDV 640
>DDX4_MACFA (Q4R5S7) Probable ATP-dependent RNA helicase DDX4 (EC 3.6.1.-)| (DEAD box protein 4) (VASA homolog) Length = 725 Score = 123 bits (308), Expect = 6e-28 Identities = 65/158 (41%), Positives = 100/158 (63%), Gaps = 2/158 (1%) Frame = +3 Query: 69 ANKSITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSRNLSRQ-YGASA 245 A + + Q V K +L +ILR + ++F TK+ D ++ L ++ ++ Sbjct: 512 ACRDVQQTVLQVGQFSKREKLVEILRNIGD-ERTMVFVETKKKADFIATFLCQEKISTTS 570 Query: 246 IHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTGVEDYVHRIG 425 IHGD+ Q ER+ L +FR G+CP+LVAT VAARGLD+++++ V+N+D P+ +++YVHRIG Sbjct: 571 IHGDREQREREQALGDFRCGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIG 630 Query: 426 RTGRAGASGIAYTFF-CDQDSKYASDLVKILEGANQAV 536 RTGR G +G A +FF + D+ A LVK+L A Q V Sbjct: 631 RTGRCGNTGRAISFFDLESDNHLAQPLVKVLTDAQQDV 668
>DBP3_CRYNE (Q5KHB7) ATP-dependent RNA helicase DBP3 (EC 3.6.1.-)| Length = 605 Score = 123 bits (308), Expect = 6e-28 Identities = 80/231 (34%), Positives = 118/231 (51%), Gaps = 12/231 (5%) Frame = +3 Query: 9 ASXFAH*PCPVNIGNTDELVANKSITQYVEVTTS-MEKGRRLDQILRQQ---EPGSK--- 167 AS F + P + +G+ DEL ANK I Q VEV + +K RL L+ P SK Sbjct: 381 ASTFLNNPLRITVGS-DELSANKRIEQIVEVLDNPRDKDFRLTHHLKAHLKVHPNSKTSP 439 Query: 168 --VIIFCSTKRMCDQLSRNLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVA 338 +++F K+ +L + R Y A+HGD +Q R L F+TG+ +LVATDVA Sbjct: 440 TRILVFALYKKEAQRLEYTIRRAGYAVGALHGDMTQEARFKALEAFKTGQQNVLVATDVA 499 Query: 339 ARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFC--DQDSKYASDLVKI 512 ARGLD+ D+ +V+N FP ED+VHR GRTGRAG +G A TFF + + A + +++ Sbjct: 500 ARGLDIPDVGLVINVTFPLTTEDFVHRCGRTGRAGKTGKAVTFFTGENHEKSLAGEFMRV 559 Query: 513 LEGANQAVSPELRAMVXXXXXXXXXXXXWASSNDSYGGHGAYGSQTRDGPS 665 L + E+ +G +GA+ +T + P+ Sbjct: 560 LRDVGAEIPKEMDRFPTTI------------KKKEHGSYGAFYKETTNAPA 598
>DDX4_HUMAN (Q9NQI0) Probable ATP-dependent RNA helicase DDX4 (EC 3.6.1.-)| (DEAD box protein 4) (VASA homolog) Length = 724 Score = 122 bits (307), Expect = 8e-28 Identities = 65/158 (41%), Positives = 100/158 (63%), Gaps = 2/158 (1%) Frame = +3 Query: 69 ANKSITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSRNLSRQ-YGASA 245 A + + Q V K +L +ILR + ++F TK+ D ++ L ++ ++ Sbjct: 511 ACRDVQQTVLQVGQFSKREKLVEILRNIGD-ERTMVFVETKKKADFIATFLCQEKISTTS 569 Query: 246 IHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTGVEDYVHRIG 425 IHGD+ Q ER+ L +FR G+CP+LVAT VAARGLD+++++ V+N+D P+ +++YVHRIG Sbjct: 570 IHGDREQREREQALGDFRFGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIG 629 Query: 426 RTGRAGASGIAYTFF-CDQDSKYASDLVKILEGANQAV 536 RTGR G +G A +FF + D+ A LVK+L A Q V Sbjct: 630 RTGRCGNTGRAISFFDLESDNHLAQPLVKVLTDAQQDV 667
>PRP28_ASPFU (Q4WPE9) Pre-mRNA splicing ATP-dependent RNA helicase prp28 (EC| 3.6.1.-) Length = 796 Score = 122 bits (305), Expect = 1e-27 Identities = 65/164 (39%), Positives = 100/164 (60%), Gaps = 2/164 (1%) Frame = +3 Query: 30 PCPVNIGNTDELVANKSITQYVEVTTSMEKGR-RLDQILRQQEPGSKVIIFCSTKRMCDQ 206 P V IG+ E V ++ Q VE+ +K + RL IL E +I+F + KR CD Sbjct: 592 PAIVTIGSAGEAV--DTVEQRVEMIAGEDKRKKRLADILSSGEFRPPIIVFVNIKRNCDA 649 Query: 207 LSRNLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNY 383 ++R + + + + +HG K+Q +R++ L+ R G +LVATD+A RG+DV D+ +VVN+ Sbjct: 650 IAREIKQMGFSSVTLHGSKTQEQREAALASVRNGSTDVLVATDLAGRGIDVPDVSLVVNF 709 Query: 384 DFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKIL 515 + +E Y HRIGRTGRAG SG+A TF ++D+ DL ++L Sbjct: 710 NMANSIESYTHRIGRTGRAGKSGVAITFLGNEDADVMYDLKQML 753
>DDX4_RAT (Q64060) Probable ATP-dependent RNA helicase DDX4 (EC 3.6.1.-)| (DEAD box protein 4) (VASA homolog) (rVLG) Length = 713 Score = 121 bits (303), Expect = 2e-27 Identities = 64/158 (40%), Positives = 102/158 (64%), Gaps = 2/158 (1%) Frame = +3 Query: 69 ANKSITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSRNLSRQ-YGASA 245 A + + Q + + K R+L +ILR + ++F TK+ D ++ L ++ ++ Sbjct: 496 ACRDVQQSILQVGPVFKKRKLVEILRNIGD-ERPMVFVETKKKADFIATFLCQEKISTTS 554 Query: 246 IHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTGVEDYVHRIG 425 IHGD+ Q ER+ L +FR G+CP+LVAT VAARGLD+++++ V+N++ P+ +++YVHRIG Sbjct: 555 IHGDREQREREQALGDFRCGKCPVLVATSVAARGLDIENVQHVINFNLPSTIDEYVHRIG 614 Query: 426 RTGRAGASGIAYTFF-CDQDSKYASDLVKILEGANQAV 536 RTGR G +G A +FF + D+ A LVK+L A Q V Sbjct: 615 RTGRCGNTGRAISFFDTESDNHLAQPLVKVLSDAQQDV 652
>DDX4_PIG (Q6GWX0) Probable ATP-dependent RNA helicase DDX4 (EC 3.6.1.-)| (DEAD box protein 4) (VASA homolog) (VASA-like protein) Length = 722 Score = 120 bits (301), Expect = 4e-27 Identities = 62/142 (43%), Positives = 95/142 (66%), Gaps = 2/142 (1%) Frame = +3 Query: 117 KGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSRNLSRQ-YGASAIHGDKSQAERDSVLSE 293 K +L +ILR + ++F TK+ D ++ L ++ ++IHGD+ Q ER+ L + Sbjct: 525 KREKLLEILRNIGD-ERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGD 583 Query: 294 FRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFF- 470 FR G+CP+LVAT VAARGLD+++++ V+N+D P+ +++YVHRIGRTGR G +G A +FF Sbjct: 584 FRFGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFD 643 Query: 471 CDQDSKYASDLVKILEGANQAV 536 + D+ A LVK+L A Q V Sbjct: 644 LESDNHLAQPLVKVLTDAQQDV 665
>GLH2_CAEEL (Q966L9) ATP-dependent RNA helicase glh-2 (EC 3.6.1.-) (Germline| helicase 2) Length = 974 Score = 116 bits (291), Expect = 5e-26 Identities = 70/168 (41%), Positives = 93/168 (55%), Gaps = 12/168 (7%) Frame = +3 Query: 69 ANKSITQYVEVTTSMEKGRRLDQIL-----------RQQEPGSKVIIFCSTKRMCDQLSR 215 ANK + Q E EK +L +IL + K I+F S + M D L+ Sbjct: 776 ANKCVLQEFEKCDRSEKKDKLLEILGIDIDSYTTEKNSEVYTKKTIVFVSQRAMADTLAS 835 Query: 216 NLSR-QYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFP 392 LS Q A IHG + Q ER L +FR G P+L+AT VA RGLD+K + V+NYD P Sbjct: 836 ILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMP 895 Query: 393 TGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAV 536 ++DY+HRIGRTGR G +G A T F +D S+LV++L A+Q V Sbjct: 896 DNIDDYIHRIGRTGRVGNAGRA-TSFISEDCNLLSELVRVLSDADQLV 942
>IF4A_CAEEL (P27639) Eukaryotic initiation factor 4A (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 402 Score = 115 bits (289), Expect = 9e-26 Identities = 48/115 (41%), Positives = 80/115 (69%), Gaps = 1/115 (0%) Frame = +3 Query: 162 SKVIIFCSTKRMCDQLSRNLSR-QYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVA 338 ++ +IFC+T+R D L+ ++ Q+ S +HGD QAERD+++ EFR+G +L+ TD+ Sbjct: 269 TQAVIFCNTRRKVDTLTEKMTENQFTVSCLHGDMDQAERDTIMREFRSGSSRVLITTDIL 328 Query: 339 ARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDL 503 ARG+DV+ + +V+NYD P+ E+Y+HRIGR+GR G G+A F + D++ ++ Sbjct: 329 ARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTENDARQLKEI 383
>PRP28_SCHPO (Q9Y7T7) Pre-mRNA splicing ATP-dependent RNA helicase prp28 (EC| 3.6.1.-) Length = 662 Score = 114 bits (286), Expect = 2e-25 Identities = 64/174 (36%), Positives = 101/174 (58%), Gaps = 2/174 (1%) Frame = +3 Query: 30 PCPVNIGNTDELVANKSITQYVE-VTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQ 206 P + IGN + V + Q VE ++ +K RR+++IL +IIF + KR + Sbjct: 474 PVMLTIGNIGQAVDR--VEQRVEMISDDSKKWRRVEEILESNRFSPPIIIFVNLKRNIEA 531 Query: 207 LSRNLSR-QYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNY 383 +++ L+ + A +HG KSQ +R+ + + R ILVATD+A RG+D+ ++ +V+NY Sbjct: 532 IAKQLNAIGWHAVTLHGSKSQEQRERAIEQLRNKTADILVATDIAGRGIDIPNVSLVLNY 591 Query: 384 DFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVSPE 545 + +EDY HRIGRTGRAG SG A TF +D+ DL +L + +A P+ Sbjct: 592 NMAKSIEDYTHRIGRTGRAGKSGTAITFLGPEDTDVYYDLRVLLSRSAKAHIPD 645
>RHLE_ECOLI (P25888) Putative ATP-dependent RNA helicase rhlE (EC 3.6.1.-)| Length = 454 Score = 114 bits (286), Expect = 2e-25 Identities = 63/171 (36%), Positives = 99/171 (57%), Gaps = 1/171 (0%) Frame = +3 Query: 9 ASXFAH*PCPVNIGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCST 188 A H P + + + A+ +TQ+V K L ++ + +V++F T Sbjct: 198 AEKLLHNPLEIEVARRN--TASDQVTQHVHFVDKKRKRELLSHMIGKGN-WQQVLVFTRT 254 Query: 189 KRMCDQLSRNLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDI 365 K + L+ L++ ++AIHG+KSQ R L++F++G +LVATD+AARGLD++++ Sbjct: 255 KHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVATDIAARGLDIEEL 314 Query: 366 RVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILE 518 VVNY+ P EDYVHRIGRTGRA A+G A + C + K D+ K+L+ Sbjct: 315 PHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDIEKLLK 365
>PRP5_YARLI (Q6CCZ1) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 974 Score = 114 bits (285), Expect = 3e-25 Identities = 56/135 (41%), Positives = 83/135 (61%), Gaps = 1/135 (0%) Frame = +3 Query: 156 PGSKVIIFCSTKRMCDQLSRNLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATD 332 P K +IF + D L + L + Y +IHG K QA+RD +S+F++G +L+AT Sbjct: 663 PNPKCLIFVERQESADSLLKELIQSGYPCLSIHGGKEQADRDQAISDFKSGLVSVLIATS 722 Query: 333 VAARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKI 512 VAARGLDVK + +VVN+D P +EDYVHR+GRTGRAG G A TF + A+++ + Sbjct: 723 VAARGLDVKGLGLVVNWDSPNHMEDYVHRVGRTGRAGQKGTALTFLLSDQERLAAEISRA 782 Query: 513 LEGANQAVSPELRAM 557 ++ + A ++ M Sbjct: 783 IKSSGNAPPAPVQLM 797
>IF4A_CRYNE (Q5KN60) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 401 Score = 114 bits (284), Expect = 4e-25 Identities = 50/115 (43%), Positives = 78/115 (67%), Gaps = 1/115 (0%) Frame = +3 Query: 162 SKVIIFCSTKRMCDQLSRNL-SRQYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVA 338 ++ +IFCST+R D L++ L RQ+ SA+HGD Q ER+ ++ EFR+G +L+ TD+ Sbjct: 268 TQAVIFCSTRRKVDWLTQQLHDRQFTVSAMHGDMKQEEREVIMKEFRSGSSRVLITTDLL 327 Query: 339 ARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDL 503 ARG+DV+ + +V+NYD P+ E+Y+HRIGR GR G G+A F ++D ++ Sbjct: 328 ARGIDVQQVSLVINYDLPSSKENYIHRIGRGGRFGRKGVAINFVSNEDKNMLEEI 382
>FAL1_KLULA (Q6CX73) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 398 Score = 114 bits (284), Expect = 4e-25 Identities = 49/108 (45%), Positives = 79/108 (73%), Gaps = 1/108 (0%) Frame = +3 Query: 162 SKVIIFCSTKRMCDQLSRNLSR-QYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVA 338 ++ +IFC+T++ D LSR L++ + S++HGD Q ERD V+++FR+G+ +L++TDV Sbjct: 265 TQCVIFCNTRKKVDWLSRKLTQTNFSVSSMHGDMKQEERDQVMNDFRSGKARVLISTDVW 324 Query: 339 ARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQD 482 ARG+DV+ I +V+NYD P +E+Y+HRIGR+GR G G+A F ++ Sbjct: 325 ARGIDVQQISLVINYDIPDNLENYIHRIGRSGRFGRKGVAINFITKEE 372
>PRP5_CANAL (Q5ADL0) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 884 Score = 113 bits (283), Expect = 5e-25 Identities = 65/164 (39%), Positives = 93/164 (56%), Gaps = 3/164 (1%) Frame = +3 Query: 150 QEPGSKVIIFCSTKRMCDQLSRNL-SRQYGASAIHGDKSQAERDSVLSEFRT--GRCPIL 320 + P SK+++F + D+L NL S +Y A AIHG K Q +R + EF + IL Sbjct: 551 EHPDSKILVFTEKQNDADELVANLLSNKYPAIAIHGGKDQMDRKYAIKEFASMDSGINIL 610 Query: 321 VATDVAARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASD 500 +AT +AARGLDV+++ +V+N+D P +EDYVHR+GRTGRAGA G A TF K + Sbjct: 611 IATSIAARGLDVRNLGLVINFDPPNHMEDYVHRVGRTGRAGAKGNAITFVSSSQPKEVFN 670 Query: 501 LVKILEGANQAVSPELRAMVXXXXXXXXXXXXWASSNDSYGGHG 632 LVK L+ ++ + P+L + SS +GG G Sbjct: 671 LVKALKLSHSDIDPKLEEIANKFVTKVKAGKEKISS--GFGGKG 712
>IF4A_DROME (Q02748) Eukaryotic initiation factor 4A (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 403 Score = 112 bits (280), Expect = 1e-24 Identities = 48/112 (42%), Positives = 76/112 (67%), Gaps = 1/112 (0%) Frame = +3 Query: 171 IIFCSTKRMCDQLSRNLS-RQYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARG 347 +IFC+T+R DQL++ +S + SA+HGD Q +R+ ++ +FR+G +L+ TD+ ARG Sbjct: 273 VIFCNTRRKVDQLTQEMSIHNFTVSAMHGDMEQRDREVIMKQFRSGSSRVLITTDLLARG 332 Query: 348 LDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDL 503 +DV+ + +V+NYD P+ E+Y+HRIGR GR G G+A F D D + D+ Sbjct: 333 IDVQQVSLVINYDLPSNRENYIHRIGRGGRFGRKGVAINFITDDDRRILKDI 384
>GLH1_CAEEL (P34689) ATP-dependent RNA helicase glh-1 (EC 3.6.1.-) (Germline| helicase 1) Length = 763 Score = 112 bits (280), Expect = 1e-24 Identities = 69/168 (41%), Positives = 91/168 (54%), Gaps = 12/168 (7%) Frame = +3 Query: 69 ANKSITQYVEVTTSMEKGRRLDQIL-----------RQQEPGSKVIIFCSTKRMCDQLSR 215 ANK + Q E EK +L ++L + K ++F S + M D L+ Sbjct: 565 ANKCVLQEFERCERSEKKDKLLELLGIDIDSYTTEKSAEVYTKKTMVFVSQRAMADTLAS 624 Query: 216 NLSR-QYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFP 392 LS Q A IHG + Q ER L +FR G P+L+AT VA RGLD+K + V+NYD P Sbjct: 625 ILSSAQVPAITIHGAREQRERSEALRQFRNGSKPVLIATAVAERGLDIKGVDHVINYDMP 684 Query: 393 TGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAV 536 ++DY+HRIGRTGR G SG A T F +D S+LV +L A Q V Sbjct: 685 DNIDDYIHRIGRTGRVGNSGRA-TSFISEDCSLLSELVGVLADAQQIV 731
>IF4A_USTMA (Q4P331) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 411 Score = 112 bits (279), Expect = 1e-24 Identities = 50/115 (43%), Positives = 78/115 (67%), Gaps = 1/115 (0%) Frame = +3 Query: 162 SKVIIFCSTKRMCDQLSRNL-SRQYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVA 338 ++ +IFC+T+R D L+ L SR++ SA+HGD QA+R+ ++ EFR+G +L+ TD+ Sbjct: 278 TQAVIFCNTRRKVDWLTDKLTSREFTVSAMHGDMEQAQREVIMREFRSGSSRVLITTDLL 337 Query: 339 ARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDL 503 ARG+DV+ + +V+NYD P+ E+Y+HRIGR GR G G+A F D + D+ Sbjct: 338 ARGIDVQQVSLVINYDLPSNRENYIHRIGRGGRFGRKGVAINFVTSDDVRMLRDI 392
>PRP28_CRYNE (Q5KNF8) Pre-mRNA splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 738 Score = 111 bits (278), Expect = 2e-24 Identities = 68/177 (38%), Positives = 102/177 (57%), Gaps = 4/177 (2%) Frame = +3 Query: 30 PCPVNIGNTDELVANKSITQYVEVTTSMEKGR-RLDQILRQQEPGSKVIIFCSTKRMCDQ 206 P V IGN E V ++ Q VE EK + RL +ILR +I+F + K+ D Sbjct: 542 PATVVIGNAGEAV--DTVEQRVEFVHGDEKKKARLIEILRTIGLPPPIIVFVNQKKTADM 599 Query: 207 LSRNLSRQYGASAI--HGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVN 380 + + + +Q G S + H KSQ +R++ L R G +LVATD+A RG+DV D+ +V+N Sbjct: 600 VVKYV-QQAGMSGVTLHSGKSQEQREAALQALRDGEISVLVATDLAGRGIDVPDVSLVIN 658 Query: 381 YDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDL-VKILEGANQAVSPEL 548 + +E YVHRIGRTGRAG +G+A TF + D + DL +++ + ++PEL Sbjct: 659 WQMSDTIEKYVHRIGRTGRAGKTGVAITFLTNDDDEVMYDLRIEVEKSKMSKMNPEL 715
>IF4A2_MACFA (Q4R4Y9) Eukaryotic initiation factor 4A-II (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-2) (eIF4A-II) (eIF-4A-II) Length = 408 Score = 111 bits (277), Expect = 2e-24 Identities = 49/115 (42%), Positives = 77/115 (66%), Gaps = 1/115 (0%) Frame = +3 Query: 162 SKVIIFCSTKRMCDQLSRNL-SRQYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVA 338 ++ +IF +T+R D L+ + +R + SA+HGD Q ERD ++ EFR+G +L+ TD+ Sbjct: 275 TQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLL 334 Query: 339 ARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDL 503 ARG+DV+ + +V+NYD PT E+Y+HRIGR GR G G+A F ++D + D+ Sbjct: 335 ARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDI 389
>PRP28_DEBHA (Q6BLU9) Pre-mRNA splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 580 Score = 111 bits (277), Expect = 2e-24 Identities = 66/171 (38%), Positives = 97/171 (56%), Gaps = 14/171 (8%) Frame = +3 Query: 45 IGNTDELVANKSITQYVEVTTSMEKG------RRLDQIL------RQQEPGSKVIIFCST 188 IGN E V N I Q E + + ++LD++ + + +IIF + Sbjct: 388 IGNVGEAVDN--INQQFEYFGARQSSDEILDPKKLDKLFSILRFHKDENRNYSIIIFANF 445 Query: 189 KRMCDQLSRNLSRQYGA--SAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKD 362 K+ C++L+ LSR+ + + IHG KSQ R+ + FR G+ IL+ATDVAARG+D+ + Sbjct: 446 KKACEELAYELSRKGFSDNTVIHGSKSQEARERAIDSFREGKDKILIATDVAARGIDIPN 505 Query: 363 IRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKIL 515 + +VVNY ++Y+HRIGRTGRAG G + TF D DS+ DL K L Sbjct: 506 VSLVVNYQMTKKFDEYIHRIGRTGRAGNKGTSCTFIDDGDSEVFLDLKKFL 556
>IF4A2_PONPY (Q5R4X1) Eukaryotic initiation factor 4A-II (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-2) (eIF4A-II) (eIF-4A-II) Length = 407 Score = 111 bits (277), Expect = 2e-24 Identities = 49/115 (42%), Positives = 77/115 (66%), Gaps = 1/115 (0%) Frame = +3 Query: 162 SKVIIFCSTKRMCDQLSRNL-SRQYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVA 338 ++ +IF +T+R D L+ + +R + SA+HGD Q ERD ++ EFR+G +L+ TD+ Sbjct: 274 TQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLL 333 Query: 339 ARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDL 503 ARG+DV+ + +V+NYD PT E+Y+HRIGR GR G G+A F ++D + D+ Sbjct: 334 ARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDI 388
>IF4A2_MOUSE (P10630) Eukaryotic initiation factor 4A-II (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-2) (eIF4A-II) (eIF-4A-II) Length = 407 Score = 111 bits (277), Expect = 2e-24 Identities = 49/115 (42%), Positives = 77/115 (66%), Gaps = 1/115 (0%) Frame = +3 Query: 162 SKVIIFCSTKRMCDQLSRNL-SRQYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVA 338 ++ +IF +T+R D L+ + +R + SA+HGD Q ERD ++ EFR+G +L+ TD+ Sbjct: 274 TQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLL 333 Query: 339 ARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDL 503 ARG+DV+ + +V+NYD PT E+Y+HRIGR GR G G+A F ++D + D+ Sbjct: 334 ARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDI 388
>IF4A2_HUMAN (Q14240) Eukaryotic initiation factor 4A-II (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-2) (eIF4A-II) (eIF-4A-II) Length = 407 Score = 111 bits (277), Expect = 2e-24 Identities = 49/115 (42%), Positives = 77/115 (66%), Gaps = 1/115 (0%) Frame = +3 Query: 162 SKVIIFCSTKRMCDQLSRNL-SRQYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVA 338 ++ +IF +T+R D L+ + +R + SA+HGD Q ERD ++ EFR+G +L+ TD+ Sbjct: 274 TQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLL 333 Query: 339 ARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDL 503 ARG+DV+ + +V+NYD PT E+Y+HRIGR GR G G+A F ++D + D+ Sbjct: 334 ARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDI 388
>DEAD_BUCAP (Q8K9H6) Cold-shock DEAD box protein A homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase deaD homolog) Length = 601 Score = 111 bits (277), Expect = 2e-24 Identities = 69/172 (40%), Positives = 101/172 (58%), Gaps = 5/172 (2%) Frame = +3 Query: 51 NTDELVANKSITQYVEVTTS--MEKGRRLDQILR--QQEPGSKVIIFCSTKRMCDQLSRN 218 N E+ +IT ++ S M GR+ D ++R + E S IIF TK ++S Sbjct: 204 NPQEIKIQSNITTRPDIKQSYWMVYGRKTDALIRFLEVEDFSATIIFVKTKNATLEVSEA 263 Query: 219 LSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPT 395 L R Y ++A++GD +QA R+ L ++GR IL+ATDVAARGLDV I V+NYD P Sbjct: 264 LERNGYNSAALNGDMNQALREQTLERLKSGRLDILIATDVAARGLDVDRISFVINYDIPM 323 Query: 396 GVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVSPELR 551 E YVHRIGRTGRAG +G A F +++ + ++ + + NQ + PE++ Sbjct: 324 DSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNIERTI---NQTI-PEVQ 371
>IF4A_SCHPO (P47943) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 392 Score = 110 bits (276), Expect = 3e-24 Identities = 49/115 (42%), Positives = 78/115 (67%), Gaps = 1/115 (0%) Frame = +3 Query: 162 SKVIIFCSTKRMCDQLSRNLS-RQYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVA 338 ++ +IFC+T+R D L+ L+ R + S++HGD QA+RD+++ EFRTG IL+ TD+ Sbjct: 259 TQAVIFCNTRRKVDWLTEQLTERDFTVSSMHGDMDQAQRDTLMHEFRTGSSRILITTDLL 318 Query: 339 ARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDL 503 ARG+DV+ + +V+NYD P E+Y+HRIGR GR G G++ F + D + ++ Sbjct: 319 ARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVSINFVTNDDVRMMREI 373
>PRP28_CANAL (Q59W52) Pre-mRNA splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 581 Score = 110 bits (276), Expect = 3e-24 Identities = 63/164 (38%), Positives = 92/164 (56%), Gaps = 6/164 (3%) Frame = +3 Query: 45 IGNTDELVAN--KSITQYVEVTTSMEKGRRLDQILRQQ---EPGSKVIIFCSTKRMCDQL 209 IG E + N +S TT K +L +I+R +IIF + K +CD L Sbjct: 398 IGGAGEALDNISQSFEFLSSATTEATKFNKLIKIIRSHWRVTENPLIIIFANFKHVCDSL 457 Query: 210 SRNLS-RQYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYD 386 S+ LS IHG KSQ R+ ++ FR +L+ATDVAARG+D+ ++ +V+NY Sbjct: 458 SQELSSNDINNVVIHGSKSQDMREQAITNFRNHESEVLIATDVAARGIDIPNVTLVINYQ 517 Query: 387 FPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILE 518 ++Y+HRIGRTGRAG G ++TF DQD++ + L K L+ Sbjct: 518 MVKKFDEYIHRIGRTGRAGNLGESFTFISDQDTEIFTPLKKFLK 561
>IF4A_NEUCR (Q7RV88) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 425 Score = 110 bits (276), Expect = 3e-24 Identities = 50/115 (43%), Positives = 77/115 (66%), Gaps = 1/115 (0%) Frame = +3 Query: 162 SKVIIFCSTKRMCDQLSRNLS-RQYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVA 338 ++ +IFC+T+R D L+ L+ R + SA+HGD QA+RD ++ EFR+G +L+ATD+ Sbjct: 292 TQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMDQAQRDLIMKEFRSGSSRVLIATDLL 351 Query: 339 ARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDL 503 ARG+DV+ + +V+NYD P E+Y+HRIGR GR G G+A F D + ++ Sbjct: 352 ARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREI 406
>IF4A_EMENI (Q5B948) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 421 Score = 110 bits (276), Expect = 3e-24 Identities = 50/115 (43%), Positives = 77/115 (66%), Gaps = 1/115 (0%) Frame = +3 Query: 162 SKVIIFCSTKRMCDQLSRNLS-RQYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVA 338 ++ +IFC+T+R D L+ L+ R + SA+HGD QA+RD ++ EFR+G +L+ATD+ Sbjct: 288 TQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMEQAQRDVIMKEFRSGSSRVLIATDLL 347 Query: 339 ARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDL 503 ARG+DV+ + +V+NYD P E+Y+HRIGR GR G G+A F D + ++ Sbjct: 348 ARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREI 402
>IF4A_ASPFU (Q4WX43) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 406 Score = 110 bits (276), Expect = 3e-24 Identities = 50/115 (43%), Positives = 77/115 (66%), Gaps = 1/115 (0%) Frame = +3 Query: 162 SKVIIFCSTKRMCDQLSRNLS-RQYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVA 338 ++ +IFC+T+R D L+ L+ R + SA+HGD QA+RD ++ EFR+G +L+ATD+ Sbjct: 265 TQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMEQAQRDVIMKEFRSGSSRVLIATDLL 324 Query: 339 ARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDL 503 ARG+DV+ + +V+NYD P E+Y+HRIGR GR G G+A F D + ++ Sbjct: 325 ARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREI 379
>DEAD_BUCAI (P57453) Cold-shock DEAD box protein A homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase deaD homolog) Length = 601 Score = 110 bits (274), Expect = 5e-24 Identities = 65/161 (40%), Positives = 94/161 (58%), Gaps = 5/161 (3%) Frame = +3 Query: 51 NTDELVANKSITQYVEVTTS--MEKGRRLDQILR--QQEPGSKVIIFCSTKRMCDQLSRN 218 N E+ +IT ++ S M GR+ D ++R + E S IIF TK ++S Sbjct: 204 NPKEIKIQSNITTRPDIKQSYWMVYGRKTDALIRFLEAEDFSATIIFVRTKNATLEVSEA 263 Query: 219 LSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPT 395 L R Y ++A++GD +QA R+ L + GR IL+ATDVAARGLDV I V+NYD P Sbjct: 264 LERNGYNSAALNGDMNQALREQTLERLKNGRLDILIATDVAARGLDVDRISFVINYDIPM 323 Query: 396 GVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILE 518 E YVHRIGRTGRAG +G A F +++ + ++ + ++ Sbjct: 324 DSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNIERTMK 364
>IF4A_CANAL (P87206) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 397 Score = 110 bits (274), Expect = 5e-24 Identities = 52/133 (39%), Positives = 83/133 (62%), Gaps = 1/133 (0%) Frame = +3 Query: 162 SKVIIFCSTKRMCDQLSRNLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVA 338 ++ +IFC+T+ + L+ L Q + SAIH D QAERD+++ EFR+G IL++TD+ Sbjct: 263 TQAVIFCNTRSKVEFLTNKLREQHFTVSAIHADLPQAERDTIMKEFRSGSSRILISTDLL 322 Query: 339 ARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILE 518 ARG+DV+ + +V+NYD P E+Y+HRIGR GR G G+A F D+D ++ K Sbjct: 323 ARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTDRDVGMMREIEKFYS 382 Query: 519 GANQAVSPELRAM 557 + + ++ A+ Sbjct: 383 TQIEEMPADIGAL 395
>FAL1_YARLI (Q6C347) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 397 Score = 110 bits (274), Expect = 5e-24 Identities = 48/115 (41%), Positives = 79/115 (68%), Gaps = 1/115 (0%) Frame = +3 Query: 162 SKVIIFCSTKRMCDQLSRNLS-RQYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVA 338 ++ +IFC+TK+ D L++ + + ++HGD +Q +RDS+++EFR+GR +L++TDV Sbjct: 264 TQAVIFCNTKKKVDWLTQQMKDNNFTVCSMHGDMAQKDRDSIMNEFRSGRSRVLISTDVW 323 Query: 339 ARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDL 503 ARG+DV+ + +V+NYD P E+Y+HRIGR+GR G G+A F + D D+ Sbjct: 324 ARGIDVQQVSLVINYDLPPNRENYIHRIGRSGRFGRKGVAINFATNDDITTLRDI 378
>FAL1_NEUCR (Q9P735) ATP-dependent RNA helicase fal-1 (EC 3.6.1.-)| Length = 400 Score = 109 bits (273), Expect = 7e-24 Identities = 48/115 (41%), Positives = 77/115 (66%), Gaps = 1/115 (0%) Frame = +3 Query: 162 SKVIIFCSTKRMCDQLSRNLSR-QYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVA 338 ++ +IFC+T+R D L+ + + S++HGD Q ERDS++ +FR G +L++TDV Sbjct: 266 TQAVIFCNTRRKVDWLTDKMREANFTVSSMHGDMPQKERDSIMQDFRQGNSRVLISTDVW 325 Query: 339 ARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDL 503 ARG+DV+ + +V+NYD P+ E+Y+HRIGR+GR G G+A F +D + D+ Sbjct: 326 ARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTSEDVRILRDI 380
>IF4A_ASPOR (Q2UPY3) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 421 Score = 109 bits (273), Expect = 7e-24 Identities = 49/115 (42%), Positives = 77/115 (66%), Gaps = 1/115 (0%) Frame = +3 Query: 162 SKVIIFCSTKRMCDQLSRNLS-RQYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVA 338 ++ +IFC+T+R D L+ L+ R + SA+HGD Q++RD ++ EFR+G +L+ATD+ Sbjct: 288 TQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMEQSQRDVIMKEFRSGSSRVLIATDLL 347 Query: 339 ARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDL 503 ARG+DV+ + +V+NYD P E+Y+HRIGR GR G G+A F D + ++ Sbjct: 348 ARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREI 402
>IF4A1_MACFA (Q4R8K5) Eukaryotic initiation factor 4A-I (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-1) (eIF4A-I) (eIF-4A-I) Length = 406 Score = 109 bits (273), Expect = 7e-24 Identities = 49/115 (42%), Positives = 77/115 (66%), Gaps = 1/115 (0%) Frame = +3 Query: 162 SKVIIFCSTKRMCDQLSRNL-SRQYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVA 338 ++ +IF +T+R D L+ + +R + ASA+HGD Q ERD ++ EFR+G +L+ TD+ Sbjct: 273 TQAVIFINTRRKVDWLTEKMHARDFTASAMHGDMDQKERDVIMREFRSGSSRVLITTDLL 332 Query: 339 ARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDL 503 ARG+DV+ + +V+NYD PT E+Y+HRIGR GR G G+A ++D + D+ Sbjct: 333 ARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDI 387
>FAL1_YEAST (Q12099) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-) (Translation| initiation factor four A-like protein 1) Length = 399 Score = 109 bits (273), Expect = 7e-24 Identities = 49/108 (45%), Positives = 75/108 (69%), Gaps = 1/108 (0%) Frame = +3 Query: 162 SKVIIFCSTKRMCDQLSRNLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVA 338 ++ +IFC+TK+ D LS+ L + + ++HGD Q ERD V+++FRTG +L++TDV Sbjct: 266 TQCVIFCNTKKKVDWLSQRLIQSNFAVVSMHGDMKQEERDKVMNDFRTGHSRVLISTDVW 325 Query: 339 ARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQD 482 ARG+DV+ + +V+NYD P +E+Y+HRIGR+GR G G+A F D Sbjct: 326 ARGIDVQQVSLVINYDLPEIIENYIHRIGRSGRFGRKGVAINFITKAD 373
>FAL1_GIBZE (Q4IAA0) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 401 Score = 109 bits (272), Expect = 9e-24 Identities = 48/115 (41%), Positives = 77/115 (66%), Gaps = 1/115 (0%) Frame = +3 Query: 162 SKVIIFCSTKRMCDQLSRNLSR-QYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVA 338 ++ +IFC+T+R D L+ + + S++HGD Q ERDS++ +FR G +L++TDV Sbjct: 267 TQAVIFCNTRRKVDWLTDKMREANFTVSSMHGDMPQKERDSIMQDFRQGNSRVLISTDVW 326 Query: 339 ARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDL 503 ARG+DV+ + +V+NYD P+ E+Y+HRIGR+GR G G+A F +D + D+ Sbjct: 327 ARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTTEDVRILRDI 381
>IF4A3_NICPL (P41380) Eukaryotic initiation factor 4A-3 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-3) (eIF-4A-3) Length = 391 Score = 109 bits (272), Expect = 9e-24 Identities = 56/133 (42%), Positives = 81/133 (60%), Gaps = 1/133 (0%) Frame = +3 Query: 162 SKVIIFCSTKRMCDQLSRNL-SRQYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVA 338 ++ +IFC+TKR D L+ + + S++HGD Q ERD++++EFR G +L+ TDV Sbjct: 258 TQAVIFCNTKRKVDWLTSKMRENNFTVSSMHGDMPQKERDAIMAEFRGGTTRVLITTDVW 317 Query: 339 ARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILE 518 ARGLDV+ + +V+NYD P E Y+HRIGR+GR G G+A F SD +KIL Sbjct: 318 ARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINF-------VKSDDIKILR 370 Query: 519 GANQAVSPELRAM 557 Q S ++ M Sbjct: 371 DIEQYYSTQIDEM 383
>DEAD_MYCTU (Q11039) Cold-shock DEAD box protein A homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase deaD homolog) Length = 563 Score = 109 bits (272), Expect = 9e-24 Identities = 70/190 (36%), Positives = 100/190 (52%), Gaps = 1/190 (0%) Frame = +3 Query: 66 VANKSITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSRNL-SRQYGAS 242 VA Y++V M+ R+ ++ EP +I+F TK+ ++++ L +R + A+ Sbjct: 223 VAENISQSYIQVARKMDALTRVLEV----EPFEAMIVFVRTKQATEEIAEKLRARGFSAA 278 Query: 243 AIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTGVEDYVHRI 422 AI GD QA+R+ ++ R G ILVATDVAARGLDV+ I V+NYD P E YVHRI Sbjct: 279 AISGDVPQAQRERTITALRDGDIDILVATDVAARGLDVERISHVLNYDIPHDTESYVHRI 338 Query: 423 GRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVSPELRAMVXXXXXXXXXXXXWA 602 GRTGRAG SG A F ++ L+K +E A + E + Sbjct: 339 GRTGRAGRSGAALIFVSPRE----LHLLKAIEKATRQTLTEAQLPTVEDVNTQRVAKFAD 394 Query: 603 SSNDSYGGHG 632 S ++ GG G Sbjct: 395 SITNALGGPG 404
>IF4A_DEBHA (Q6BRN4) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 397 Score = 108 bits (271), Expect = 1e-23 Identities = 51/133 (38%), Positives = 84/133 (63%), Gaps = 1/133 (0%) Frame = +3 Query: 162 SKVIIFCSTKRMCDQLSRNLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVA 338 ++ +IFC+T+ + L+ L + + SAIH D QA+RD++++EFR+G IL++TD+ Sbjct: 263 TQAVIFCNTRSKVEFLTTKLKGENFTVSAIHADLPQADRDTIMNEFRSGSSRILISTDLL 322 Query: 339 ARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILE 518 ARG+DV+ + +V+NYD P E+Y+HRIGR GR G G+A F DQD ++ K Sbjct: 323 ARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTDQDVGMMREIEKFYS 382 Query: 519 GANQAVSPELRAM 557 + + ++ A+ Sbjct: 383 TQIEEMPADIGAL 395
>FAL1_USTMA (Q4P184) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 397 Score = 108 bits (271), Expect = 1e-23 Identities = 50/115 (43%), Positives = 75/115 (65%), Gaps = 1/115 (0%) Frame = +3 Query: 162 SKVIIFCSTKRMCDQLSRNLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVA 338 ++ +IFC+T+R D LS + + S++HG+ Q ERD V++EFR G +L+ TDV Sbjct: 264 TQAVIFCNTRRKVDWLSAKMKENNFQVSSMHGEMQQKERDEVMAEFRQGSSRVLITTDVW 323 Query: 339 ARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDL 503 ARG+D+ +I +V+NYD PT E+Y+HRIGR+GR G G+A F D + D+ Sbjct: 324 ARGIDIANISLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTVDDVRTLRDI 378
>EXP9_STRR6 (P0A4D8) Probable ATP-dependent RNA helicase exp9 (EC 3.6.1.-)| (Exported protein 9) Length = 524 Score = 108 bits (271), Expect = 1e-23 Identities = 62/155 (40%), Positives = 85/155 (54%), Gaps = 1/155 (0%) Frame = +3 Query: 81 ITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSRNLS-RQYGASAIHGD 257 + QY EK + +++ +P I+F TKR D+L+R L R + A IHGD Sbjct: 214 VDQYYIRVKEQEKFDTMTRLMDVAQP-ELAIVFGRTKRRVDELTRGLKIRGFRAEGIHGD 272 Query: 258 KSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGR 437 Q +R VL +F+ G +LVATDVAARGLD+ + V NYD P E YVHRIGRTGR Sbjct: 273 LDQNKRLRVLRDFKNGNLDVLVATDVAARGLDISGVTHVYNYDIPQDPESYVHRIGRTGR 332 Query: 438 AGASGIAYTFFCDQDSKYASDLVKILEGANQAVSP 542 AG SG + TF + Y + + + + + P Sbjct: 333 AGKSGQSITFVAPNEMGYLQIIENLTKKRMKGLKP 367
>EXP9_STRPN (P0A4D7) Probable ATP-dependent RNA helicase exp9 (EC 3.6.1.-)| (Exported protein 9) Length = 524 Score = 108 bits (271), Expect = 1e-23 Identities = 62/155 (40%), Positives = 85/155 (54%), Gaps = 1/155 (0%) Frame = +3 Query: 81 ITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSRNLS-RQYGASAIHGD 257 + QY EK + +++ +P I+F TKR D+L+R L R + A IHGD Sbjct: 214 VDQYYIRVKEQEKFDTMTRLMDVAQP-ELAIVFGRTKRRVDELTRGLKIRGFRAEGIHGD 272 Query: 258 KSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGR 437 Q +R VL +F+ G +LVATDVAARGLD+ + V NYD P E YVHRIGRTGR Sbjct: 273 LDQNKRLRVLRDFKNGNLDVLVATDVAARGLDISGVTHVYNYDIPQDPESYVHRIGRTGR 332 Query: 438 AGASGIAYTFFCDQDSKYASDLVKILEGANQAVSP 542 AG SG + TF + Y + + + + + P Sbjct: 333 AGKSGQSITFVAPNEMGYLQIIENLTKKRMKGLKP 367
>FAL1_EMENI (Q5AUL4) ATP-dependent RNA helicase fal1 (EC 3.6.1.-)| Length = 399 Score = 108 bits (271), Expect = 1e-23 Identities = 48/115 (41%), Positives = 76/115 (66%), Gaps = 1/115 (0%) Frame = +3 Query: 162 SKVIIFCSTKRMCDQLSRNLSR-QYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVA 338 ++ +IFC+T+R D L+ + + S++HG+ Q ERDS++ +FR G +L++TDV Sbjct: 265 TQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSRVLISTDVW 324 Query: 339 ARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDL 503 ARG+DV+ + +V+NYD PT E+Y+HRIGR+GR G G+A F D + D+ Sbjct: 325 ARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTSDDVRILRDI 379
>FAL1_ASPOR (Q2UAK1) ATP-dependent RNA helicase fal1 (EC 3.6.1.-)| Length = 398 Score = 108 bits (271), Expect = 1e-23 Identities = 48/115 (41%), Positives = 76/115 (66%), Gaps = 1/115 (0%) Frame = +3 Query: 162 SKVIIFCSTKRMCDQLSRNLSR-QYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVA 338 ++ +IFC+T+R D L+ + + S++HG+ Q ERDS++ +FR G +L++TDV Sbjct: 264 TQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSRVLISTDVW 323 Query: 339 ARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDL 503 ARG+DV+ + +V+NYD PT E+Y+HRIGR+GR G G+A F D + D+ Sbjct: 324 ARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTSDDVRILRDI 378
>FAL1_ASPFU (Q4WEB4) ATP-dependent RNA helicase fal1 (EC 3.6.1.-)| Length = 398 Score = 108 bits (271), Expect = 1e-23 Identities = 48/115 (41%), Positives = 76/115 (66%), Gaps = 1/115 (0%) Frame = +3 Query: 162 SKVIIFCSTKRMCDQLSRNLSR-QYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVA 338 ++ +IFC+T+R D L+ + + S++HG+ Q ERDS++ +FR G +L++TDV Sbjct: 264 TQAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSRVLISTDVW 323 Query: 339 ARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDL 503 ARG+DV+ + +V+NYD PT E+Y+HRIGR+GR G G+A F D + D+ Sbjct: 324 ARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTSDDVRILRDI 378
>DDX41_MOUSE (Q91VN6) Probable ATP-dependent RNA helicase DDX41 (EC 3.6.1.-)| (DEAD box protein 41) Length = 622 Score = 108 bits (270), Expect = 1e-23 Identities = 72/180 (40%), Positives = 97/180 (53%), Gaps = 4/180 (2%) Frame = +3 Query: 30 PCPVNIGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQL 209 P +N+G A+ + Q VE K L + L++ P V+IF K D + Sbjct: 393 PVTINVGRAG--AASLDVIQEVEYVKEEAKMVYLLECLQKTPP--PVLIFAEKKADVDAI 448 Query: 210 SRNLS-RQYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYD 386 L + A AIHG K Q ER + FR G+ +LVATDVA++GLD I+ V+NYD Sbjct: 449 HEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYD 508 Query: 387 FPTGVEDYVHRIGRTGRAGASGIAYTFF---CDQDSKYASDLVKILEGANQAVSPELRAM 557 P +E+YVHRIGRTGR+G +GIA TF CD+ DL +L A Q V P L+ + Sbjct: 509 MPEEIENYVHRIGRTGRSGNTGIATTFINKACDE--SVLMDLKALLLEAKQKVPPGLQVL 566
>DDX41_HUMAN (Q9UJV9) Probable ATP-dependent RNA helicase DDX41 (EC 3.6.1.-)| (DEAD box protein 41) (DEAD box protein abstrakt homolog) Length = 622 Score = 108 bits (270), Expect = 1e-23 Identities = 72/180 (40%), Positives = 97/180 (53%), Gaps = 4/180 (2%) Frame = +3 Query: 30 PCPVNIGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQL 209 P +N+G A+ + Q VE K L + L++ P V+IF K D + Sbjct: 393 PVTINVGRAG--AASLDVIQEVEYVKEEAKMVYLLECLQKTPP--PVLIFAEKKADVDAI 448 Query: 210 SRNLS-RQYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYD 386 L + A AIHG K Q ER + FR G+ +LVATDVA++GLD I+ V+NYD Sbjct: 449 HEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYD 508 Query: 387 FPTGVEDYVHRIGRTGRAGASGIAYTFF---CDQDSKYASDLVKILEGANQAVSPELRAM 557 P +E+YVHRIGRTGR+G +GIA TF CD+ DL +L A Q V P L+ + Sbjct: 509 MPEEIENYVHRIGRTGRSGNTGIATTFINKACDE--SVLMDLKALLLEAKQKVPPVLQVL 566
>IF4A_CANGA (Q6FQQ6) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 396 Score = 108 bits (270), Expect = 1e-23 Identities = 48/115 (41%), Positives = 80/115 (69%), Gaps = 1/115 (0%) Frame = +3 Query: 162 SKVIIFCSTKRMCDQLSRNLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVA 338 ++ +IFC+T+R ++L++ L+ + S+I+ D Q ERD+++ EFR+G IL++TD+ Sbjct: 262 TQAVIFCNTRRKVEELTQRLTADNFTVSSIYSDLPQQERDTIMKEFRSGSSRILISTDLL 321 Query: 339 ARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDL 503 ARG+DV+ + +V+NYD PT E+Y+HRIGR GR G G+A F ++D + +L Sbjct: 322 ARGIDVQQVSLVINYDLPTNKENYIHRIGRGGRFGRKGVAINFIVNEDVQALREL 376
>IF4A_ASHGO (Q75BL8) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation initiation factor 1) Length = 396 Score = 108 bits (270), Expect = 1e-23 Identities = 48/108 (44%), Positives = 76/108 (70%), Gaps = 1/108 (0%) Frame = +3 Query: 162 SKVIIFCSTKRMCDQLSRNLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVA 338 ++ +IFC+T+R ++L++ L+ + SAI+ D QA+RD+++ EFRTG IL++TD+ Sbjct: 262 TQAVIFCNTRRKVEELTKRLTDDSFTVSAIYSDLPQAQRDTIMKEFRTGSSRILISTDLL 321 Query: 339 ARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQD 482 ARG+DV+ + +V+NYD P E+Y+HRIGR GR G G+A D+D Sbjct: 322 ARGIDVQQVSLVINYDLPNNKENYIHRIGRGGRFGRKGVAINLVTDRD 369
>FAL1_CANGA (Q6FJG1) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 399 Score = 108 bits (270), Expect = 1e-23 Identities = 50/117 (42%), Positives = 78/117 (66%), Gaps = 1/117 (0%) Frame = +3 Query: 162 SKVIIFCSTKRMCDQLSRNLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVA 338 ++ +IFC++K+ D L+ L + + ++HGD Q ERD V++EFRTG+ +L++TDV Sbjct: 266 TQCVIFCNSKKKVDWLAHKLKQSNFAVISMHGDMKQDERDRVMNEFRTGQSRVLISTDVW 325 Query: 339 ARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVK 509 ARG+DV+ + +V+NYD P E+YVHRIGR+GR G G+A F D+ ++ K Sbjct: 326 ARGIDVQQVSLVINYDLPEITENYVHRIGRSGRFGRKGVAINFLTKIDASRMKEIEK 382
>IF4A1_PONPY (Q5R5F5) Eukaryotic initiation factor 4A-I (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-1) (eIF4A-I) (eIF-4A-I) Length = 406 Score = 108 bits (269), Expect = 2e-23 Identities = 48/115 (41%), Positives = 76/115 (66%), Gaps = 1/115 (0%) Frame = +3 Query: 162 SKVIIFCSTKRMCDQLSRNL-SRQYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVA 338 ++ +IF +T+R D L+ + +R + SA+HGD Q ERD ++ EFR+G +L+ TD+ Sbjct: 273 TQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLL 332 Query: 339 ARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDL 503 ARG+DV+ + +V+NYD PT E+Y+HRIGR GR G G+A ++D + D+ Sbjct: 333 ARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDI 387
>IF4A1_MOUSE (P60843) Eukaryotic initiation factor 4A-I (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-1) (eIF4A-I) (eIF-4A-I) Length = 406 Score = 108 bits (269), Expect = 2e-23 Identities = 48/115 (41%), Positives = 76/115 (66%), Gaps = 1/115 (0%) Frame = +3 Query: 162 SKVIIFCSTKRMCDQLSRNL-SRQYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVA 338 ++ +IF +T+R D L+ + +R + SA+HGD Q ERD ++ EFR+G +L+ TD+ Sbjct: 273 TQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLL 332 Query: 339 ARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDL 503 ARG+DV+ + +V+NYD PT E+Y+HRIGR GR G G+A ++D + D+ Sbjct: 333 ARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDI 387
>IF4A1_HUMAN (P60842) Eukaryotic initiation factor 4A-I (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-1) (eIF4A-I) (eIF-4A-I) Length = 406 Score = 108 bits (269), Expect = 2e-23 Identities = 48/115 (41%), Positives = 76/115 (66%), Gaps = 1/115 (0%) Frame = +3 Query: 162 SKVIIFCSTKRMCDQLSRNL-SRQYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVA 338 ++ +IF +T+R D L+ + +R + SA+HGD Q ERD ++ EFR+G +L+ TD+ Sbjct: 273 TQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLL 332 Query: 339 ARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDL 503 ARG+DV+ + +V+NYD PT E+Y+HRIGR GR G G+A ++D + D+ Sbjct: 333 ARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDI 387
>IF4A1_RABIT (P29562) Eukaryotic initiation factor 4A-I (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-1) (eIF4A-I) (eIF-4A-I) (Fragment) Length = 398 Score = 108 bits (269), Expect = 2e-23 Identities = 48/115 (41%), Positives = 76/115 (66%), Gaps = 1/115 (0%) Frame = +3 Query: 162 SKVIIFCSTKRMCDQLSRNL-SRQYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVA 338 ++ +IF +T+R D L+ + +R + SA+HGD Q ERD ++ EFR+G +L+ TD+ Sbjct: 265 TQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLL 324 Query: 339 ARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDL 503 ARG+DV+ + +V+NYD PT E+Y+HRIGR GR G G+A ++D + D+ Sbjct: 325 ARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDI 379
>FAL1_ASHGO (Q755W0) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 398 Score = 108 bits (269), Expect = 2e-23 Identities = 48/108 (44%), Positives = 75/108 (69%), Gaps = 1/108 (0%) Frame = +3 Query: 162 SKVIIFCSTKRMCDQLSRNL-SRQYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVA 338 ++ +IFC+TK+ D LS L + ++IHGD Q +RD V+S+FR+G +L++TDV Sbjct: 265 TQCVIFCNTKKKVDWLSHKLIQNNFAVASIHGDMKQDDRDKVMSDFRSGSSRVLISTDVW 324 Query: 339 ARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQD 482 ARG+DV+ + +V+NYD P +E+Y+HRIGR+GR G G+A F ++ Sbjct: 325 ARGIDVQQVSLVINYDLPELLENYIHRIGRSGRFGRKGVAINFITREE 372
>DDX48_MOUSE (Q91VC3) Probable ATP-dependent RNA helicase DDX48 (EC 3.6.1.-)| (DEAD box protein 48) Length = 411 Score = 107 bits (268), Expect = 3e-23 Identities = 49/115 (42%), Positives = 75/115 (65%), Gaps = 1/115 (0%) Frame = +3 Query: 162 SKVIIFCSTKRMCDQLSRNLSR-QYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVA 338 ++ +IFC+TKR D L+ + + S++HGD Q ER+S++ EFR+G +L++TDV Sbjct: 278 TQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVW 337 Query: 339 ARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDL 503 ARGLDV + +++NYD P E Y+HRIGR+GR G G+A F + D + D+ Sbjct: 338 ARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDI 392
>DDX48_MACFA (Q4R3Q1) Probable ATP-dependent RNA helicase DDX48 (EC 3.6.1.-)| (DEAD box protein 48) Length = 411 Score = 107 bits (268), Expect = 3e-23 Identities = 49/115 (42%), Positives = 75/115 (65%), Gaps = 1/115 (0%) Frame = +3 Query: 162 SKVIIFCSTKRMCDQLSRNLSR-QYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVA 338 ++ +IFC+TKR D L+ + + S++HGD Q ER+S++ EFR+G +L++TDV Sbjct: 278 TQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVW 337 Query: 339 ARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDL 503 ARGLDV + +++NYD P E Y+HRIGR+GR G G+A F + D + D+ Sbjct: 338 ARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDI 392
>DDX48_HUMAN (P38919) Probable ATP-dependent RNA helicase DDX48 (EC 3.6.1.-)| (DEAD box protein 48) (Eukaryotic initiation factor 4A-like NUK-34) (Nuclear matrix protein 265) (hNMP 265) (Eukaryotic translation initiation factor 4A isoform 3) Length = 411 Score = 107 bits (268), Expect = 3e-23 Identities = 49/115 (42%), Positives = 75/115 (65%), Gaps = 1/115 (0%) Frame = +3 Query: 162 SKVIIFCSTKRMCDQLSRNLSR-QYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVA 338 ++ +IFC+TKR D L+ + + S++HGD Q ER+S++ EFR+G +L++TDV Sbjct: 278 TQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVW 337 Query: 339 ARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDL 503 ARGLDV + +++NYD P E Y+HRIGR+GR G G+A F + D + D+ Sbjct: 338 ARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDI 392
>PRP28_YARLI (Q6C024) Pre-mRNA splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 575 Score = 107 bits (268), Expect = 3e-23 Identities = 60/171 (35%), Positives = 97/171 (56%), Gaps = 2/171 (1%) Frame = +3 Query: 9 ASXFAH*PCPVNIGNTDELVANKSITQYVE-VTTSMEKGRRLDQILRQQEPGSKVIIFCS 185 A + P V IG+ + A ++TQ VE + T ++ RRL I+ +++ +++F + Sbjct: 382 AKKYLRRPGIVTIGSAGQ--AGSTVTQLVEFLNTDEKRKRRLLDIISKRQYRPPIVVFLN 439 Query: 186 TKRMCDQLSRNL-SRQYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKD 362 KR C+ +S L + + + IHG K Q +R+ + + G +LVATDVA RGLD+ + Sbjct: 440 YKRDCEAVSDALVAAGWRTAIIHGGKQQEQREQAVQHLKRGAVDVLVATDVAGRGLDIPN 499 Query: 363 IRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKIL 515 + +VVN+ +E Y HRIGRTGRAG G A TF +D +L +++ Sbjct: 500 VSLVVNFQMANNIESYTHRIGRTGRAGKRGTAVTFLGQEDDDVLFELKQMI 550
>DBPA_ECOLI (P21693) ATP-independent RNA helicase dbpA (EC 3.6.1.-)| Length = 457 Score = 107 bits (268), Expect = 3e-23 Identities = 67/166 (40%), Positives = 98/166 (59%), Gaps = 5/166 (3%) Frame = +3 Query: 30 PCPVNIGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQL 209 P + I +TD L I Q T+S K L ++L +P S ++FC+TK+ C + Sbjct: 202 PLAIEIDSTDAL---PPIEQQFYETSSKGKIPLLQRLLSLHQPSS-CVVFCNTKKDCQAV 257 Query: 210 SRNLSRQYGASAI--HGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNY 383 L+ + G SA+ HGD Q +RD L F G +LVATDVAARGLD+K + +VVN+ Sbjct: 258 CDALN-EVGQSALSLHGDLEQRDRDQTLVRFANGSARVLVATDVAARGLDIKSLELVVNF 316 Query: 384 DFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYA---SDLVKI 512 + E +VHRIGRT RAG SG+A +F ++++ A SD+++I Sbjct: 317 ELAWDPEVHVHRIGRTARAGNSGLAISFCAPEEAQRANIISDMLQI 362
>IF410_TOBAC (P41382) Eukaryotic initiation factor 4A-10 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-10) (eIF-4A-10) Length = 413 Score = 107 bits (268), Expect = 3e-23 Identities = 51/114 (44%), Positives = 74/114 (64%), Gaps = 1/114 (0%) Frame = +3 Query: 171 IIFCSTKRMCDQLSRNL-SRQYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARG 347 +IF +T+R D L+ + SR + SA HGD Q RD ++ EFR+G +L+ TD+ ARG Sbjct: 283 VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 342 Query: 348 LDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVK 509 +DV+ + +V+NYD PT E+Y+HRIGR+GR G G+A F D + SD+ K Sbjct: 343 IDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTKDDERMLSDIQK 396
>IF4A_CRYPV (O02494) Eukaryotic initiation factor 4A (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 405 Score = 107 bits (267), Expect = 3e-23 Identities = 45/107 (42%), Positives = 73/107 (68%), Gaps = 1/107 (0%) Frame = +3 Query: 165 KVIIFCSTKRMCDQLSRNL-SRQYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAA 341 + II+C+T+R DQL++ + R + S++HGD Q +R+ ++ +FR+G +L+ TD+ A Sbjct: 272 QAIIYCNTRRRVDQLTKQMRERDFTCSSMHGDMDQKDREVIMRQFRSGSSRVLITTDLLA 331 Query: 342 RGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQD 482 RG+DV+ + +V+NYD P E Y+HRIGR+GR G G++ F D D Sbjct: 332 RGIDVQQVSLVINYDLPVSPETYIHRIGRSGRFGKKGVSINFVTDDD 378
>IF4A_KLULA (Q6CXT4) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 396 Score = 107 bits (267), Expect = 3e-23 Identities = 48/108 (44%), Positives = 75/108 (69%), Gaps = 1/108 (0%) Frame = +3 Query: 162 SKVIIFCSTKRMCDQLSRNL-SRQYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVA 338 ++ +IFC+T+R ++L+ L + SAI+ D Q ERD+++ EFR+G IL++TD+ Sbjct: 262 TQAVIFCNTRRKVEELTERLRENNFTVSAIYSDLQQQERDTIMKEFRSGSSRILISTDLL 321 Query: 339 ARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQD 482 ARG+DV+ + +V+NYD P+ E+Y+HRIGR GR G GIA F ++D Sbjct: 322 ARGIDVQQVSLVINYDLPSNKENYIHRIGRGGRFGRKGIAINFVTNKD 369
>FAL1_CRYNE (Q5KJJ2) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 396 Score = 107 bits (267), Expect = 3e-23 Identities = 48/115 (41%), Positives = 77/115 (66%), Gaps = 1/115 (0%) Frame = +3 Query: 162 SKVIIFCSTKRMCDQLSRNLSR-QYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVA 338 ++ +IFC+T+R D L+ + + S++HG+ Q ERD++++EFR G+ +L+ TDV Sbjct: 263 TQAVIFCNTRRKVDWLTEKMREANFTVSSMHGEMVQKERDAIMAEFRGGQSRVLITTDVW 322 Query: 339 ARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDL 503 ARG+DV+ + +V+NYD PT E+Y+HRIGR+GR G G+A F D + D+ Sbjct: 323 ARGIDVQQVSLVINYDLPTSRENYLHRIGRSGRFGRKGVAINFVTVDDVRILRDI 377
>RHLB_SHEON (Q8EJQ5) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 439 Score = 107 bits (266), Expect = 4e-23 Identities = 64/168 (38%), Positives = 93/168 (55%), Gaps = 1/168 (0%) Frame = +3 Query: 36 PVNIGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSR 215 PV + E +K+I + + + +K R L ++ + P K I+F +TK C+ L Sbjct: 216 PVKVEIAPEEKTSKNIKEEIFYPSQEDKMRLLLTLIEEDWP-EKAIVFSNTKHSCENLWS 274 Query: 216 NLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFP 392 L + + GD Q +R +L +F G+ ILVATDVAARGL + D+ V NYD P Sbjct: 275 WLEGDGHRVGLLTGDVPQKKRIRILEQFTQGQLDILVATDVAARGLHISDVSHVYNYDLP 334 Query: 393 TGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAV 536 EDYVHRIGRTGRAG G++ +F C++ YA +L I N ++ Sbjct: 335 DDCEDYVHRIGRTGRAGNKGVSVSFACEE---YALNLPAIETYINHSI 379
>RHLB_XANCP (Q8P4D4) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 573 Score = 106 bits (265), Expect = 6e-23 Identities = 58/154 (37%), Positives = 89/154 (57%), Gaps = 1/154 (0%) Frame = +3 Query: 60 ELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSRNLSRQ-YG 236 E + + Q + + EK L +L + E G++ ++F +TK ++++R L R Y Sbjct: 225 ETITAARVRQRIYFPSDEEKQTLLLGLLSRSE-GARTMVFVNTKAFVERVARTLERHGYR 283 Query: 237 ASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTGVEDYVH 416 + GD Q +R+S+L+ F+ G+ ILVATDVAARGL + ++ V NYD P EDYVH Sbjct: 284 VGVLSGDVPQKKRESLLNRFQKGQLEILVATDVAARGLHIDGVKYVYNYDLPFDAEDYVH 343 Query: 417 RIGRTGRAGASGIAYTFFCDQDSKYASDLVKILE 518 RIGRT R G G A +F C++ + D+ +E Sbjct: 344 RIGRTARLGEEGDAISFACERYAMSLPDIEAYIE 377
>IF4A_YEAST (P10081) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation initiation factor 1/2) (Stimulator factor I 37 kDa component) (p37) Length = 394 Score = 106 bits (265), Expect = 6e-23 Identities = 49/117 (41%), Positives = 78/117 (66%), Gaps = 1/117 (0%) Frame = +3 Query: 162 SKVIIFCSTKRMCDQLSRNLSR-QYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVA 338 ++ +IFC+T+R ++L+ L ++ SAI+ D Q ERD+++ EFR+G IL++TD+ Sbjct: 260 TQAVIFCNTRRKVEELTTKLRNDKFTVSAIYSDLPQQERDTIMKEFRSGSSRILISTDLL 319 Query: 339 ARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVK 509 ARG+DV+ + +V+NYD P E+Y+HRIGR GR G G+A F ++D +L K Sbjct: 320 ARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTNEDVGAMRELEK 376
>FAL1_DEBHA (Q6BT27) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 399 Score = 106 bits (264), Expect = 7e-23 Identities = 49/115 (42%), Positives = 76/115 (66%), Gaps = 1/115 (0%) Frame = +3 Query: 162 SKVIIFCSTKRMCDQLSRNLSR-QYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVA 338 ++ +IFC+TK + L+ + + + A+HGD Q ERDS++++FRTG +L++TDV Sbjct: 266 TQAVIFCNTKVKVNWLTDQMKKANFTVVAMHGDMKQDERDSIMNDFRTGNSRVLISTDVW 325 Query: 339 ARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDL 503 ARG+DV+ + +V+NYD PT E+YVHRIGR+GR G G+A +D D+ Sbjct: 326 ARGIDVQQVSLVINYDLPTDKENYVHRIGRSGRFGRKGVAINLVTKEDVDELRDI 380
>RHLB_XANAC (Q8PFZ3) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 571 Score = 106 bits (264), Expect = 7e-23 Identities = 58/154 (37%), Positives = 89/154 (57%), Gaps = 1/154 (0%) Frame = +3 Query: 60 ELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSRNLSRQ-YG 236 E + + Q + + EK L +L + E G++ ++F +TK ++++R L R Y Sbjct: 225 ESITAARVRQRIYFPSDEEKQTLLLGLLSRSE-GARTMVFVNTKAFVERVARTLERHGYR 283 Query: 237 ASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTGVEDYVH 416 + GD Q +R+S+L+ F+ G+ ILVATDVAARGL + ++ V NYD P EDYVH Sbjct: 284 VGVLSGDVPQKKRESLLNRFQKGQLEILVATDVAARGLHIDGVKYVYNYDLPFDAEDYVH 343 Query: 417 RIGRTGRAGASGIAYTFFCDQDSKYASDLVKILE 518 RIGRT R G G A +F C++ + D+ +E Sbjct: 344 RIGRTARLGEEGDAISFACERYAMSLPDIEAYIE 377
>RHLB_MANSM (Q65RG7) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 417 Score = 106 bits (264), Expect = 7e-23 Identities = 68/169 (40%), Positives = 95/169 (56%), Gaps = 18/169 (10%) Frame = +3 Query: 87 QYVEVTTSMEKGRRLDQ---------------ILRQQEPGSKVIIFCSTKRMCDQLSRNL 221 +YVEV + G R+ + L ++E + IIF +TK C+++ L Sbjct: 213 EYVEVEPLQKTGHRIKEELFYPSNEDKMPLLITLLEEEWPERCIIFANTKHQCEKIWGYL 272 Query: 222 SRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTG 398 + + + GD +Q +R S+L +F G ILVATDVAARGL + D+ V NYD P Sbjct: 273 AADGHRVGLLTGDVAQKKRLSLLKQFTDGALDILVATDVAARGLHIPDVTHVFNYDLPDD 332 Query: 399 VEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILE--GANQAVS 539 EDYVHRIGRTGRAG SG++ +F C++ YA +L I E G + AVS Sbjct: 333 REDYVHRIGRTGRAGESGVSISFACEE---YAMNLPAIEEYIGHHIAVS 378
>RHLB_XANOR (Q5GUR8) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 574 Score = 106 bits (264), Expect = 7e-23 Identities = 58/154 (37%), Positives = 89/154 (57%), Gaps = 1/154 (0%) Frame = +3 Query: 60 ELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSRNLSRQ-YG 236 E + + Q + + EK L +L + E G++ ++F +TK ++++R L R Y Sbjct: 225 ETITAARVRQRIYFPSDDEKQTLLLGLLSRSE-GARTMVFVNTKAFVERVARTLERHGYR 283 Query: 237 ASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTGVEDYVH 416 + GD Q +R+S+L+ F+ G+ ILVATDVAARGL + ++ V NYD P EDYVH Sbjct: 284 VGVLSGDVPQKKRESLLNRFQKGQLEILVATDVAARGLHIDGVKYVYNYDLPFDAEDYVH 343 Query: 417 RIGRTGRAGASGIAYTFFCDQDSKYASDLVKILE 518 RIGRT R G G A +F C++ + D+ +E Sbjct: 344 RIGRTARLGEEGDAISFACERYAMSLPDIEAYIE 377
>RHLB_VIBCH (Q9KV52) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 438 Score = 105 bits (263), Expect = 1e-22 Identities = 61/136 (44%), Positives = 82/136 (60%), Gaps = 1/136 (0%) Frame = +3 Query: 108 SMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSRNLSRQ-YGASAIHGDKSQAERDSV 284 S E L Q L ++E + IIF +TK C+Q+ +L+ + + GD Q +R+ + Sbjct: 239 SNEHKMALLQTLIEEEWPDRAIIFANTKHRCEQIWAHLAADNHRVGLLTGDVPQKKRERI 298 Query: 285 LSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYT 464 L +F G ILVATDVAARGL + + V NYD P EDYVHRIGRTGRAGASG + + Sbjct: 299 LEQFTQGDVDILVATDVAARGLHIPQVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSIS 358 Query: 465 FFCDQDSKYASDLVKI 512 F C++ YA +L I Sbjct: 359 FACEE---YAINLPAI 371
>IF4A9_TOBAC (Q40471) Eukaryotic initiation factor 4A-9 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-9) (eIF-4A-9) Length = 413 Score = 105 bits (263), Expect = 1e-22 Identities = 49/112 (43%), Positives = 73/112 (65%), Gaps = 1/112 (0%) Frame = +3 Query: 171 IIFCSTKRMCDQLSRNL-SRQYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARG 347 +IF +T+R D L+ + SR + SA HGD Q RD ++ EFR+G +L+ TD+ ARG Sbjct: 283 VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 342 Query: 348 LDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDL 503 +DV+ + +V+NYD PT E+Y+HRIGR+GR G G++ F D + SD+ Sbjct: 343 IDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVSINFVTSDDERMLSDI 394
>RHLB_PASMU (Q9CJS1) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 423 Score = 105 bits (263), Expect = 1e-22 Identities = 63/166 (37%), Positives = 92/166 (55%), Gaps = 16/166 (9%) Frame = +3 Query: 87 QYVEVTTSMEKGRRLDQ---------------ILRQQEPGSKVIIFCSTKRMCDQLSRNL 221 +YVE+ + G R+ + L ++E + IIF +TK C+ + L Sbjct: 215 EYVEIEPLQKTGHRIKEELFYPSNQDKMALLLTLLEEEWPERCIIFANTKHRCEDIWGYL 274 Query: 222 SRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTG 398 + + + GD +Q +R S+L +F G ILVATDVAARGL + D+ V NYD P Sbjct: 275 AADGHRVGLLTGDVAQKKRLSLLKQFTEGHLDILVATDVAARGLHISDVSHVFNYDLPDD 334 Query: 399 VEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAV 536 EDYVHRIGRTGRAG SG++ +F C++ YA +L I E + ++ Sbjct: 335 REDYVHRIGRTGRAGESGVSISFACEE---YAMNLPAIEEYISHSI 377
>DEAD_BUCBP (Q89AF9) Cold-shock DEAD box protein A homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase deaD homolog) Length = 602 Score = 105 bits (263), Expect = 1e-22 Identities = 63/160 (39%), Positives = 93/160 (58%), Gaps = 5/160 (3%) Frame = +3 Query: 51 NTDELVANKSITQYVEVTTS--MEKGRRLDQILR--QQEPGSKVIIFCSTKRMCDQLSRN 218 N E+ +IT ++ S M G++ D ++R + E S IIF TK ++S Sbjct: 204 NPKEIRIQSNITTRPDIQQSYWMVYGKKTDALIRFLEAEDFSATIIFVRTKNATLEVSEV 263 Query: 219 LSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPT 395 L R Y ++A++GD +Q+ R+ L + + GR IL+ATDVAARGLDV I V+NYD P Sbjct: 264 LERYGYNSAALNGDMNQSLREQTLEKLKDGRLDILIATDVAARGLDVDRISFVINYDIPM 323 Query: 396 GVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKIL 515 E YVHRIGRTGRAG G A F +++ + ++ + + Sbjct: 324 DSESYVHRIGRTGRAGRKGKALLFVENRERRLLRNIERAM 363
>IF4A7_TOBAC (Q40470) Eukaryotic initiation factor 4A-7 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-7) (eIF-4A-7) Length = 413 Score = 105 bits (262), Expect = 1e-22 Identities = 49/112 (43%), Positives = 73/112 (65%), Gaps = 1/112 (0%) Frame = +3 Query: 171 IIFCSTKRMCDQLSRNL-SRQYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARG 347 +IF +T+R D L+ + +R + SA HGD Q RD ++ EFR+G +L+ TD+ ARG Sbjct: 283 VIFVNTRRKVDWLTDKMRTRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 342 Query: 348 LDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDL 503 +DV+ + +V+NYD PT E+Y+HRIGR+GR G G+A F D + SD+ Sbjct: 343 IDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVIKDDERMLSDI 394
>IF414_TOBAC (Q40467) Eukaryotic initiation factor 4A-14 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-14) (eIF-4A-14) Length = 413 Score = 105 bits (262), Expect = 1e-22 Identities = 50/114 (43%), Positives = 73/114 (64%), Gaps = 1/114 (0%) Frame = +3 Query: 171 IIFCSTKRMCDQLSRNL-SRQYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARG 347 +IF +T+R D L+ + SR + SA HGD Q RD ++ EFR+G +L+ TD+ ARG Sbjct: 283 VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 342 Query: 348 LDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVK 509 +DV+ + +V+NYD PT E+Y+HRIGR+GR G G+A F D + D+ K Sbjct: 343 IDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTKDDERMLFDIQK 396
>IF4A_YARLI (Q6CDV4) ATP-dependent RNA helicase eIF4A (EC 3.6.1.-) (Eukaryotic| initiation factor 4A) (eIF-4A) (Translation Initiation factor 1) Length = 395 Score = 105 bits (262), Expect = 1e-22 Identities = 47/115 (40%), Positives = 76/115 (66%), Gaps = 1/115 (0%) Frame = +3 Query: 162 SKVIIFCSTKRMCDQLSRNLSR-QYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVA 338 S+ +IFC+T+R D L++ L+ + S++HG+ Q++RD ++ FRTG IL+ TD+ Sbjct: 262 SQAVIFCNTRRKVDYLTQALTEADFTVSSMHGETEQSQRDVIMKAFRTGSSRILITTDLL 321 Query: 339 ARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDL 503 ARG+DV+ + +V+N+D P+ E+Y+HRIGR GR G G+A F +D +L Sbjct: 322 ARGIDVQQVSLVINFDLPSNRENYIHRIGRGGRFGRKGVAINFVTSEDHGMLKEL 376
>PRP28_CANGA (Q6FM43) Pre-mRNA splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 582 Score = 105 bits (261), Expect = 2e-22 Identities = 57/149 (38%), Positives = 89/149 (59%), Gaps = 3/149 (2%) Frame = +3 Query: 81 ITQYVEVTTSMEKGRRL--DQILRQQEPGSKVIIFCSTKRMCDQLSRNLSRQYGASAIHG 254 ITQ V T +K D +++ G IIF + K D L+ LS ++ +HG Sbjct: 407 ITQVVRHTGDDDKKLSFLKDDLIKN---GLPAIIFINYKETADWLTLRLSDRFNIVTLHG 463 Query: 255 DKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTG 434 KSQ++R+S + + ++G +L+AT+VAARGLD+ D+ +VVN+ +DY+HRIGRTG Sbjct: 464 SKSQSQRESAIQKLKSGTANVLIATNVAARGLDIPDVALVVNFQMSKKFDDYIHRIGRTG 523 Query: 435 RAGASGIAYTFFC-DQDSKYASDLVKILE 518 RAG +GIA T+ ++D + L K ++ Sbjct: 524 RAGKTGIAVTYLTGEEDPQLIKQLAKYVK 552
>IF415_TOBAC (Q40468) Eukaryotic initiation factor 4A-15 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-15) (eIF-4A-15) Length = 413 Score = 105 bits (261), Expect = 2e-22 Identities = 49/112 (43%), Positives = 73/112 (65%), Gaps = 1/112 (0%) Frame = +3 Query: 171 IIFCSTKRMCDQLSRNL-SRQYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARG 347 +IF +T+R D L+ + SR + SA HGD Q RD ++ EFR+G +L+ TD+ ARG Sbjct: 283 VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 342 Query: 348 LDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDL 503 +DV+ + +V+N+D PT E+Y+HRIGR+GR G G+A F D + SD+ Sbjct: 343 IDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTKDDERMLSDI 394
>RHLB_HAEIN (P44922) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 415 Score = 105 bits (261), Expect = 2e-22 Identities = 61/160 (38%), Positives = 89/160 (55%), Gaps = 16/160 (10%) Frame = +3 Query: 87 QYVEVTTSMEKGRRLDQ---------------ILRQQEPGSKVIIFCSTKRMCDQLSRNL 221 +Y+E+ + G R+ + L + E + I+F +TK C+++ L Sbjct: 216 EYIEIEPEQKTGHRIKEELFYPSNQDKMALLLTLMEDEWPERCIVFANTKHRCEEIWGYL 275 Query: 222 SRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTG 398 + + + GD +Q +R S+L +F G ILVATDVAARGL + D+ V NYD P Sbjct: 276 AADGHRVGLLTGDVAQKKRLSLLKQFTDGDLDILVATDVAARGLHISDVTHVFNYDLPDD 335 Query: 399 VEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILE 518 EDYVHRIGRTGRAG SG++ +F C++ YA +L I E Sbjct: 336 REDYVHRIGRTGRAGESGVSISFACEE---YAMNLPAIEE 372
>PRP28_KLULA (Q6CT49) Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 539 Score = 104 bits (260), Expect = 2e-22 Identities = 60/165 (36%), Positives = 93/165 (56%), Gaps = 3/165 (1%) Frame = +3 Query: 9 ASXFAH*PCPVNIGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGSK--VIIFC 182 A+ + P V +G + K I +YV ++ +L +++ P K +IIF Sbjct: 341 ANGYLKKPSYVTVGGEESKPKIKQIVRYVP-----DEEEKLKILVKDFLPNYKAPIIIFI 395 Query: 183 STKRMCDQLSRNLSR-QYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVK 359 + KR D L L ++ A+ +HG KSQ +R+ LS R G+ IL+ATDVA RG+D+ Sbjct: 396 NYKRTADWLFDKLREARFRATTLHGSKSQEQREHSLSLLRNGKVDILIATDVAGRGIDIP 455 Query: 360 DIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYA 494 ++ +VVN FP + +VHR+GRTGRAG +G A TF +++ A Sbjct: 456 NVSLVVNLQFPKSFDSFVHRVGRTGRAGKTGTALTFLTEEEDHSA 500
>IF4A8_TOBAC (P41381) Eukaryotic initiation factor 4A-8 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-8) (eIF-4A-8) Length = 413 Score = 104 bits (259), Expect = 3e-22 Identities = 49/114 (42%), Positives = 73/114 (64%), Gaps = 1/114 (0%) Frame = +3 Query: 171 IIFCSTKRMCDQLSRNL-SRQYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARG 347 +IF +T+R D L+ + +R + SA HGD Q RD ++ EFR+G +L+ TD+ ARG Sbjct: 283 VIFVNTRRKVDWLTDKMRTRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 342 Query: 348 LDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVK 509 +DV+ + +V+NYD PT E+Y+HRIGR+GR G G+A F D + D+ K Sbjct: 343 IDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTTDDERMLFDIQK 396
>FAL1_SCHPO (Q10055) ATP-dependent RNA helicase tif412 (EC 3.6.1.-)| Length = 394 Score = 104 bits (259), Expect = 3e-22 Identities = 43/115 (37%), Positives = 76/115 (66%), Gaps = 1/115 (0%) Frame = +3 Query: 162 SKVIIFCSTKRMCDQLSRNLSR-QYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVA 338 ++ +IFC+++R D L+ + + +++HG+ Q ERD+++ +FR G +L+ TD+ Sbjct: 261 TQAVIFCNSRRKVDWLTEKMREANFTVTSMHGEMPQKERDAIMQDFRQGNSRVLICTDIW 320 Query: 339 ARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDL 503 ARG+DV+ + +V+NYD P E+Y+HRIGR+GR G G+A F ++D + D+ Sbjct: 321 ARGIDVQQVSLVINYDLPANRENYIHRIGRSGRFGRKGVAINFVTNEDVRILRDI 375
>RHLB_SHIFL (P0A8K0) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 420 Score = 103 bits (258), Expect = 4e-22 Identities = 61/136 (44%), Positives = 83/136 (61%), Gaps = 1/136 (0%) Frame = +3 Query: 108 SMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSRNLSRQ-YGASAIHGDKSQAERDSV 284 S E+ RL Q L ++E + IIF +TK C+++ +L+ + + GD +Q +R + Sbjct: 238 SNEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRI 297 Query: 285 LSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYT 464 L EF G ILVATDVAARGL + + V NYD P EDYVHRIGRTGRAGASG + + Sbjct: 298 LDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSIS 357 Query: 465 FFCDQDSKYASDLVKI 512 C++ YA +L I Sbjct: 358 LACEE---YALNLPAI 370
>RHLB_ECOLI (P0A8J8) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 420 Score = 103 bits (258), Expect = 4e-22 Identities = 61/136 (44%), Positives = 83/136 (61%), Gaps = 1/136 (0%) Frame = +3 Query: 108 SMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSRNLSRQ-YGASAIHGDKSQAERDSV 284 S E+ RL Q L ++E + IIF +TK C+++ +L+ + + GD +Q +R + Sbjct: 238 SNEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRI 297 Query: 285 LSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYT 464 L EF G ILVATDVAARGL + + V NYD P EDYVHRIGRTGRAGASG + + Sbjct: 298 LDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSIS 357 Query: 465 FFCDQDSKYASDLVKI 512 C++ YA +L I Sbjct: 358 LACEE---YALNLPAI 370
>RHLB_ECOL6 (P0A8J9) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 420 Score = 103 bits (258), Expect = 4e-22 Identities = 61/136 (44%), Positives = 83/136 (61%), Gaps = 1/136 (0%) Frame = +3 Query: 108 SMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSRNLSRQ-YGASAIHGDKSQAERDSV 284 S E+ RL Q L ++E + IIF +TK C+++ +L+ + + GD +Q +R + Sbjct: 238 SNEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRI 297 Query: 285 LSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYT 464 L EF G ILVATDVAARGL + + V NYD P EDYVHRIGRTGRAGASG + + Sbjct: 298 LDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSIS 357 Query: 465 FFCDQDSKYASDLVKI 512 C++ YA +L I Sbjct: 358 LACEE---YALNLPAI 370
>FAL1_CANAL (Q5A9Z6) ATP-dependent RNA helicase FAL1 (EC 3.6.1.-)| Length = 399 Score = 103 bits (258), Expect = 4e-22 Identities = 51/124 (41%), Positives = 77/124 (62%), Gaps = 8/124 (6%) Frame = +3 Query: 162 SKVIIFCSTKRMCDQLSRNLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVA 338 ++ +IFC+TK + L+ + +Q + A+HGD Q ERDS++++FR G +L++TDV Sbjct: 266 TQAVIFCNTKLKVNWLADQMKKQNFTVVAMHGDMKQDERDSIMNDFRRGNSRVLISTDVW 325 Query: 339 ARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQD-------SKYAS 497 ARG+DV+ + +V+NYD PT E+Y+HRIGR+GR G G A D KY S Sbjct: 326 ARGIDVQQVSLVINYDLPTDKENYIHRIGRSGRFGRKGTAINLITKDDVVTLKEFEKYYS 385 Query: 498 DLVK 509 +K Sbjct: 386 TKIK 389
>RHLB_VIBPA (Q87KH5) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 437 Score = 103 bits (258), Expect = 4e-22 Identities = 60/138 (43%), Positives = 82/138 (59%), Gaps = 1/138 (0%) Frame = +3 Query: 108 SMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSRNLSRQ-YGASAIHGDKSQAERDSV 284 S E L Q L ++E + I+F +TK C+ + +L+ + + GD Q +R+ + Sbjct: 239 SNEDKMALLQTLIEEEWPDRAIVFANTKHKCESVWGHLAADGHRVGLLTGDVPQKKREKI 298 Query: 285 LSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYT 464 L +F G ILVATDVAARGL + + V NYD P EDYVHRIGRTGRAGASG + + Sbjct: 299 LEQFTKGDVDILVATDVAARGLHIPQVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSIS 358 Query: 465 FFCDQDSKYASDLVKILE 518 F C++ YA +L I E Sbjct: 359 FACEE---YAINLPAIEE 373
>IF4A_MAIZE (Q41741) Eukaryotic initiation factor 4A (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 410 Score = 103 bits (258), Expect = 4e-22 Identities = 49/112 (43%), Positives = 72/112 (64%), Gaps = 1/112 (0%) Frame = +3 Query: 171 IIFCSTKRMCDQLSRNL-SRQYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARG 347 +IF +T+R D L+ + SR + SA HGD Q RD ++ EFR+G +L+ TD+ ARG Sbjct: 280 VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 339 Query: 348 LDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDL 503 +DV+ + +V+NYD PT E+Y+HRIGR+GR G G+A F D + D+ Sbjct: 340 IDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERIVFDV 391
>DEAD_SHIFL (P0A9P8) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 628 Score = 103 bits (258), Expect = 4e-22 Identities = 65/172 (37%), Positives = 93/172 (54%), Gaps = 1/172 (0%) Frame = +3 Query: 36 PVNIGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSR 215 P + + I+Q M K L + L + E IIF TK +++ Sbjct: 204 PQEVRIQSSVTTRPDISQSYWTVWGMRKNEALVRFL-EAEDFDAAIIFVRTKNATLEVAE 262 Query: 216 NLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFP 392 L R Y ++A++GD +QA R+ L + GR IL+ATDVAARGLDV+ I +VVNYD P Sbjct: 263 ALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDVAARGLDVERISLVVNYDIP 322 Query: 393 TGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVSPEL 548 E YVHRIGRTGRAG +G A F +++ + L++ +E + PE+ Sbjct: 323 MDSESYVHRIGRTGRAGRAGRALLFVENRERR----LLRNIERTMKLTIPEV 370
>DEAD_KLEPN (P33906) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 642 Score = 103 bits (258), Expect = 4e-22 Identities = 65/172 (37%), Positives = 93/172 (54%), Gaps = 1/172 (0%) Frame = +3 Query: 36 PVNIGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSR 215 P + + I+Q M K L + L + E IIF TK +++ Sbjct: 204 PQEVRIQSSVTTRPDISQSYWTAYGMRKNEALVRFL-EAEDFDAAIIFVRTKNATLEVAE 262 Query: 216 NLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFP 392 L R Y ++A++GD +QA R+ L + GR IL+ATDVAARGLDV+ I +VVNYD P Sbjct: 263 ALERNGYNSAALNGDMNQALREQALERLKDGRLDILIATDVAARGLDVERISLVVNYDIP 322 Query: 393 TGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVSPEL 548 E YVHRIGRTGRAG +G A F +++ + L++ +E + PE+ Sbjct: 323 MDSESYVHRIGRTGRAGRAGRALLFVENRERR----LLRNIERTMKLTIPEV 370
>DEAD_ECOLI (P0A9P6) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 628 Score = 103 bits (258), Expect = 4e-22 Identities = 65/172 (37%), Positives = 93/172 (54%), Gaps = 1/172 (0%) Frame = +3 Query: 36 PVNIGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSR 215 P + + I+Q M K L + L + E IIF TK +++ Sbjct: 204 PQEVRIQSSVTTRPDISQSYWTVWGMRKNEALVRFL-EAEDFDAAIIFVRTKNATLEVAE 262 Query: 216 NLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFP 392 L R Y ++A++GD +QA R+ L + GR IL+ATDVAARGLDV+ I +VVNYD P Sbjct: 263 ALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDVAARGLDVERISLVVNYDIP 322 Query: 393 TGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVSPEL 548 E YVHRIGRTGRAG +G A F +++ + L++ +E + PE+ Sbjct: 323 MDSESYVHRIGRTGRAGRAGRALLFVENRERR----LLRNIERTMKLTIPEV 370
>DEAD_ECOL6 (P0A9P7) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 628 Score = 103 bits (258), Expect = 4e-22 Identities = 65/172 (37%), Positives = 93/172 (54%), Gaps = 1/172 (0%) Frame = +3 Query: 36 PVNIGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSR 215 P + + I+Q M K L + L + E IIF TK +++ Sbjct: 204 PQEVRIQSSVTTRPDISQSYWTVWGMRKNEALVRFL-EAEDFDAAIIFVRTKNATLEVAE 262 Query: 216 NLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFP 392 L R Y ++A++GD +QA R+ L + GR IL+ATDVAARGLDV+ I +VVNYD P Sbjct: 263 ALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDVAARGLDVERISLVVNYDIP 322 Query: 393 TGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVSPEL 548 E YVHRIGRTGRAG +G A F +++ + L++ +E + PE+ Sbjct: 323 MDSESYVHRIGRTGRAGRAGRALLFVENRERR----LLRNIERTMKLTIPEV 370
>DEAD_ECO57 (Q8XA87) Cold-shock DEAD box protein A (EC 3.6.1.-) (ATP-dependent| RNA helicase deaD) Length = 628 Score = 103 bits (258), Expect = 4e-22 Identities = 65/172 (37%), Positives = 93/172 (54%), Gaps = 1/172 (0%) Frame = +3 Query: 36 PVNIGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSR 215 P + + I+Q M K L + L + E IIF TK +++ Sbjct: 204 PQEVRIQSSVTTRPDISQSYWTVWGMRKNEALVRFL-EAEDFDAAIIFVRTKNATLEVAE 262 Query: 216 NLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFP 392 L R Y ++A++GD +QA R+ L + GR IL+ATDVAARGLDV+ I +VVNYD P Sbjct: 263 ALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDVAARGLDVERISLVVNYDIP 322 Query: 393 TGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVSPEL 548 E YVHRIGRTGRAG +G A F +++ + L++ +E + PE+ Sbjct: 323 MDSESYVHRIGRTGRAGRAGRALLFVENRERR----LLRNIERTMKLTIPEV 370
>GLH3_CAEEL (O01836) ATP-dependent RNA helicase glh-3 (EC 3.6.1.-) (Germline| helicase 3) Length = 720 Score = 103 bits (258), Expect = 4e-22 Identities = 56/126 (44%), Positives = 76/126 (60%), Gaps = 2/126 (1%) Frame = +3 Query: 165 KVIIFCSTKRMCDQLSRNLSR-QYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAA 341 K I+F + ++M D L+ +S Q A IHG + Q ER + L FR+G P+L+AT V Sbjct: 565 KTIVFVAQQKMADTLASIMSAAQVPAITIHGAREQKERSAALKLFRSGAKPVLIATAVVE 624 Query: 342 RGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFF-CDQDSKYASDLVKILE 518 RGLD+K + V+NYD P ++DY+HRIGRTGR G SG A +F D + LV+ L Sbjct: 625 RGLDIKGVDHVINYDMPNNIDDYIHRIGRTGRVGNSGRATSFISLADDVQILPQLVRTLA 684 Query: 519 GANQAV 536 A Q V Sbjct: 685 DAEQVV 690
>RHLB_PHOPR (Q6LLL5) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 437 Score = 103 bits (257), Expect = 5e-22 Identities = 59/136 (43%), Positives = 82/136 (60%), Gaps = 1/136 (0%) Frame = +3 Query: 108 SMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSRNLSRQ-YGASAIHGDKSQAERDSV 284 S ++ RL Q L ++E + IIF +TK C+ + +L+ + ++GD Q +R + Sbjct: 239 SNQEKMRLLQTLIEEEWPDRAIIFANTKHRCEDIWGHLAADNHRVGLLNGDVPQKKRVRI 298 Query: 285 LSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYT 464 L +F G ILVATDVAARGL + + V NYD P EDYVHRIGRTGRAG SG + + Sbjct: 299 LEQFTQGDIDILVATDVAARGLHIPQVTHVYNYDLPDDAEDYVHRIGRTGRAGESGSSIS 358 Query: 465 FFCDQDSKYASDLVKI 512 F C++ YA +L I Sbjct: 359 FACEE---YAINLPAI 371
>RHLB_ERWCT (Q6CZD9) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 429 Score = 103 bits (257), Expect = 5e-22 Identities = 61/145 (42%), Positives = 86/145 (59%), Gaps = 1/145 (0%) Frame = +3 Query: 81 ITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSRNLSRQ-YGASAIHGD 257 IT+ + ++ EK R L +L ++ P + IIF +TK C+ + +L+ + + GD Sbjct: 230 ITEELFYPSNEEKMRLLQTLLEEEWP-DRCIIFANTKHRCEDVWGHLAADGHRVGLLTGD 288 Query: 258 KSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGR 437 +Q +R +L EF G ILVATDVAARGL + + V NYD P EDYVHRIGRTGR Sbjct: 289 VAQKKRLRILEEFTQGSIDILVATDVAARGLHIPSVTHVFNYDLPDDCEDYVHRIGRTGR 348 Query: 438 AGASGIAYTFFCDQDSKYASDLVKI 512 AG SG + + C++ YA +L I Sbjct: 349 AGQSGFSISLACEE---YALNLPAI 370
>IF4A1_ARATH (P41376) Eukaryotic initiation factor 4A-1 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-1) (eIF-4A-1) Length = 412 Score = 103 bits (257), Expect = 5e-22 Identities = 49/114 (42%), Positives = 73/114 (64%), Gaps = 1/114 (0%) Frame = +3 Query: 171 IIFCSTKRMCDQLSRNL-SRQYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARG 347 +IF +T+R D L+ + SR + SA HGD Q RD ++ EFR+G +L+ TD+ ARG Sbjct: 282 VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 341 Query: 348 LDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVK 509 +DV+ + +V+N+D PT E+Y+HRIGR+GR G G+A F D + D+ K Sbjct: 342 IDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDIQK 395
>RHLB_SALTY (P0A2P0) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 420 Score = 103 bits (256), Expect = 6e-22 Identities = 61/136 (44%), Positives = 82/136 (60%), Gaps = 1/136 (0%) Frame = +3 Query: 108 SMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSRNLSRQ-YGASAIHGDKSQAERDSV 284 S E+ RL Q L ++E + IIF +TK C+ + +L+ + + GD +Q +R + Sbjct: 238 SNEEKMRLLQTLIEEEWPDRAIIFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRI 297 Query: 285 LSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYT 464 L EF G ILVATDVAARGL + + V NYD P EDYVHRIGRTGRAGASG + + Sbjct: 298 LDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSIS 357 Query: 465 FFCDQDSKYASDLVKI 512 C++ YA +L I Sbjct: 358 LACEE---YALNLPAI 370
>RHLB_SALTI (P0A2P1) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 420 Score = 103 bits (256), Expect = 6e-22 Identities = 61/136 (44%), Positives = 82/136 (60%), Gaps = 1/136 (0%) Frame = +3 Query: 108 SMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSRNLSRQ-YGASAIHGDKSQAERDSV 284 S E+ RL Q L ++E + IIF +TK C+ + +L+ + + GD +Q +R + Sbjct: 238 SNEEKMRLLQTLIEEEWPDRAIIFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRI 297 Query: 285 LSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYT 464 L EF G ILVATDVAARGL + + V NYD P EDYVHRIGRTGRAGASG + + Sbjct: 298 LDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSIS 357 Query: 465 FFCDQDSKYASDLVKI 512 C++ YA +L I Sbjct: 358 LACEE---YALNLPAI 370
>RHLB_VIBVY (Q7MGP7) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 435 Score = 103 bits (256), Expect = 6e-22 Identities = 60/138 (43%), Positives = 81/138 (58%), Gaps = 1/138 (0%) Frame = +3 Query: 108 SMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSRNLSRQ-YGASAIHGDKSQAERDSV 284 S E L Q L ++E + IIF +TK C+ + +L+ + + GD Q +R+ + Sbjct: 239 SNEDKMALLQTLIEEEWPDRAIIFANTKYKCESIWAHLAADGHRVGLLTGDVPQKKREKI 298 Query: 285 LSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYT 464 L +F G +LVATDVAARGL + + V NYD P EDYVHRIGRTGRAGASG + + Sbjct: 299 LEQFTQGSVDLLVATDVAARGLHIPQVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSIS 358 Query: 465 FFCDQDSKYASDLVKILE 518 F C+ YA +L I E Sbjct: 359 FACED---YAINLPAIEE 373
>RHLB_VIBVU (Q8DDN6) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 435 Score = 103 bits (256), Expect = 6e-22 Identities = 60/138 (43%), Positives = 81/138 (58%), Gaps = 1/138 (0%) Frame = +3 Query: 108 SMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSRNLSRQ-YGASAIHGDKSQAERDSV 284 S E L Q L ++E + IIF +TK C+ + +L+ + + GD Q +R+ + Sbjct: 239 SNEDKMALLQTLIEEEWPDRAIIFANTKYKCESIWAHLAADGHRVGLLTGDVPQKKREKI 298 Query: 285 LSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYT 464 L +F G +LVATDVAARGL + + V NYD P EDYVHRIGRTGRAGASG + + Sbjct: 299 LEQFTQGSVDLLVATDVAARGLHIPQVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSIS 358 Query: 465 FFCDQDSKYASDLVKILE 518 F C+ YA +L I E Sbjct: 359 FACED---YAINLPAIEE 373
>IF4A_WHEAT (P41378) Eukaryotic initiation factor 4A (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 414 Score = 103 bits (256), Expect = 6e-22 Identities = 49/114 (42%), Positives = 72/114 (63%), Gaps = 1/114 (0%) Frame = +3 Query: 171 IIFCSTKRMCDQLSRNL-SRQYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARG 347 +IF +T+R D L+ + R + SA HGD Q RD ++ EFR+G +L+ TD+ ARG Sbjct: 284 VIFVNTRRKVDWLTDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 343 Query: 348 LDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVK 509 +DV+ + +V+NYD PT E+Y HRIGR+GR G G+A F +D + D+ K Sbjct: 344 IDVQQVSLVINYDLPTQPENYQHRIGRSGRFGRKGVAINFVTREDERMLFDIQK 397
>RHLB_ECO57 (Q8XAT4) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 420 Score = 102 bits (255), Expect = 8e-22 Identities = 60/136 (44%), Positives = 83/136 (61%), Gaps = 1/136 (0%) Frame = +3 Query: 108 SMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSRNLSRQ-YGASAIHGDKSQAERDSV 284 S E+ RL Q L ++E + IIF +TK C+++ +L+ + + GD +Q +R + Sbjct: 238 SNEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRI 297 Query: 285 LSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYT 464 L EF G ILVATDVAARGL + + V NYD P EDYVHRIGRTGRAGA+G + + Sbjct: 298 LDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGANGHSIS 357 Query: 465 FFCDQDSKYASDLVKI 512 C++ YA +L I Sbjct: 358 LACEE---YALNLPAI 370
>IF4A2_ARATH (P41377) Eukaryotic initiation factor 4A-2 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-2) (eIF-4A-2) Length = 412 Score = 102 bits (255), Expect = 8e-22 Identities = 49/114 (42%), Positives = 73/114 (64%), Gaps = 1/114 (0%) Frame = +3 Query: 171 IIFCSTKRMCDQLSRNL-SRQYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARG 347 +IF +T+R D L+ + SR + SA HGD Q RD ++ EFR+G +L+ TD+ ARG Sbjct: 282 VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 341 Query: 348 LDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVK 509 +DV+ + +V+N+D PT E+Y+HRIGR+GR G G+A F D + D+ K Sbjct: 342 IDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFVTLDDQRMLFDIQK 395
>IF4A6_TOBAC (Q40469) Eukaryotic initiation factor 4A-6 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-6) (eIF-4A-6) (Fragment) Length = 253 Score = 102 bits (255), Expect = 8e-22 Identities = 48/114 (42%), Positives = 72/114 (63%), Gaps = 1/114 (0%) Frame = +3 Query: 171 IIFCSTKRMCDQLSRNL-SRQYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARG 347 +IF +T+R D L+ + R + SA HGD Q RD ++ EFR+G +L+ TD+ ARG Sbjct: 124 VIFVNTRRKVDWLTDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 183 Query: 348 LDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVK 509 +DV+ + +V+NYD PT E+Y+HRIGR+GR G G++ F D + D+ K Sbjct: 184 IDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVSINFVTKDDERMLFDIQK 237
>DBPA_BACSU (P42305) ATP-dependent RNA helicase dbpA (EC 3.6.1.-)| Length = 479 Score = 102 bits (254), Expect = 1e-21 Identities = 56/126 (44%), Positives = 76/126 (60%), Gaps = 1/126 (0%) Frame = +3 Query: 129 LDQILRQQEPGSKVIIFCSTKRMCDQLSRNLSRQ-YGASAIHGDKSQAERDSVLSEFRTG 305 L +L + P S IIFC TK +QL+ L Y IHG Q +R V++EF+ G Sbjct: 231 LKDVLMTENPDS-CIIFCRTKEHVNQLTDELDDLGYPCDKIHGGMIQEDRFDVMNEFKRG 289 Query: 306 RCPILVATDVAARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDS 485 LVATDVAARG+D+++I +V+NYD P E YVHR GRTGRAG G A +F + Sbjct: 290 EYRYLVATDVAARGIDIENISLVINYDLPLEKESYVHRTGRTGRAGNKGKAISFVTAFEK 349 Query: 486 KYASDL 503 ++ +D+ Sbjct: 350 RFLADI 355
>IF4A2_NICPL (P41379) Eukaryotic initiation factor 4A-2 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-2) (eIF-4A-2) Length = 413 Score = 102 bits (254), Expect = 1e-21 Identities = 49/114 (42%), Positives = 72/114 (63%), Gaps = 1/114 (0%) Frame = +3 Query: 171 IIFCSTKRMCDQLSRNL-SRQYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARG 347 +IF +T+R D L+ + SR + SA HGD Q RD ++ EFR+G +L+ TD+ ARG Sbjct: 283 VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 342 Query: 348 LDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVK 509 +DV+ + +V+NYD PT E+Y+HRIGR+GR G G+A D + D+ K Sbjct: 343 IDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINSVTKDDERMLFDIQK 396
>IF4A_ORYSA (P35683) Eukaryotic initiation factor 4A (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 414 Score = 102 bits (254), Expect = 1e-21 Identities = 48/112 (42%), Positives = 71/112 (63%), Gaps = 1/112 (0%) Frame = +3 Query: 171 IIFCSTKRMCDQLSRNL-SRQYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARG 347 +IF +T+R D L+ + R + SA HGD Q RD ++ EFR+G +L+ TD+ ARG Sbjct: 284 VIFVNTRRKVDWLTDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 343 Query: 348 LDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDL 503 +DV+ + +V+NYD PT E+Y+HRIGR+GR G G+A F D + D+ Sbjct: 344 IDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTRDDERMLFDI 395
>RHLB_PHOLL (Q7MYL2) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 428 Score = 102 bits (253), Expect = 1e-21 Identities = 60/136 (44%), Positives = 81/136 (59%), Gaps = 1/136 (0%) Frame = +3 Query: 108 SMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSRNLSRQ-YGASAIHGDKSQAERDSV 284 S E+ RL Q L ++E + IIF +TK C+ + +L+ + + GD +Q +R + Sbjct: 239 SNEEKMRLLQTLLEEEWPDRCIIFANTKHRCEDIWAHLAADGHRVGLLTGDVAQKKRLRI 298 Query: 285 LSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYT 464 L EF G ILVATDVAARGL + + V NYD P EDYVHRIGRTGRAG SG + + Sbjct: 299 LEEFSNGNIDILVATDVAARGLHIPLVTHVFNYDLPDDCEDYVHRIGRTGRAGESGHSIS 358 Query: 465 FFCDQDSKYASDLVKI 512 C++ YA +L I Sbjct: 359 LACEE---YALNLPAI 371
>ROK1_YARLI (Q6CDS6) ATP-dependent RNA helicase ROK1 (EC 3.6.1.-)| Length = 547 Score = 101 bits (251), Expect = 2e-21 Identities = 63/172 (36%), Positives = 94/172 (54%), Gaps = 3/172 (1%) Frame = +3 Query: 30 PCPVNIGNTDELVANKSITQYVEVTTSMEKGR--RLDQILRQQEPGSKVIIFCSTKRMCD 203 P + IGN A +++ Q + V E+G+ + Q+ R+ + + VIIF + Sbjct: 322 PLRIIIGNKQ--AAAQTVEQKL-VYAGNEEGKLVAIRQMAREGQLVAPVIIFLQSIDRAK 378 Query: 204 QLSRNLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVN 380 L + L IHGD + A+R SV+ FR G +L+ TDV ARG+D + I +V+N Sbjct: 379 ALFKELVFDGINVDQIHGDMTAAKRASVIDRFRNGEVWVLICTDVLARGIDFRGINLVIN 438 Query: 381 YDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAV 536 YD P + YVHRIGRTGRAG G A TFF +D+ +V +++ + Q V Sbjct: 439 YDVPQSAQSYVHRIGRTGRAGRLGKAVTFFTKEDATNVKVVVNVMKQSGQEV 490
>IF411_TOBAC (Q40465) Eukaryotic initiation factor 4A-11 (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A-11) (eIF-4A-11) Length = 413 Score = 100 bits (250), Expect = 3e-21 Identities = 47/114 (41%), Positives = 71/114 (62%), Gaps = 1/114 (0%) Frame = +3 Query: 171 IIFCSTKRMCDQLSRNL-SRQYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARG 347 +IF +T+R D L+ + R + SA HGD Q RD ++ EFR+G +L+ TD+ ARG Sbjct: 283 VIFVNTRRKVDWLTDKMRGRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 342 Query: 348 LDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVK 509 +DV+ + +V+NYD PT E+Y+HRIG +GR G G++ F D + D+ K Sbjct: 343 IDVQQVSLVINYDLPTQPENYLHRIGHSGRFGRKGVSINFVTKDDERMLFDIQK 396
>ROK1_DEBHA (Q6BP45) ATP-dependent RNA helicase ROK1 (EC 3.6.1.-)| Length = 550 Score = 100 bits (249), Expect = 4e-21 Identities = 59/166 (35%), Positives = 93/166 (56%), Gaps = 3/166 (1%) Frame = +3 Query: 30 PCPVNIGNTDELVANKSITQYVEVTTSMEKGRRLD--QILRQQEPGSKVIIFCSTKRMCD 203 P V IG+ + A+ +I Q + V T E+G+ L Q+++Q E +IIF + Sbjct: 319 PIRVIIGHKE--AASNTIEQKL-VFTGNEEGKLLAIRQMIQQGEFKPPIIIFLQSITRAK 375 Query: 204 QLSRNLSR-QYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVN 380 L L + IH +++ +RD V+ F++G +L+ TDV ARG+D K + +V+N Sbjct: 376 ALFHELLYDRLNVDVIHAERTPKQRDEVIKRFKSGDIWVLITTDVIARGVDFKGVNLVIN 435 Query: 381 YDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILE 518 YD P + YVHRIGRTGR G +G A TFF +D K ++ +++ Sbjct: 436 YDVPQSAQAYVHRIGRTGRGGKAGKAVTFFTKEDDKAVKPIINVMK 481
>ROK1_SCHPO (Q09775) ATP-dependent RNA helicase rok1 (EC 3.6.1.-)| Length = 481 Score = 100 bits (249), Expect = 4e-21 Identities = 53/141 (37%), Positives = 83/141 (58%), Gaps = 1/141 (0%) Frame = +3 Query: 129 LDQILRQQEPGSKVIIFCSTKRMCDQL-SRNLSRQYGASAIHGDKSQAERDSVLSEFRTG 305 L Q++ E +V+IF L + L + IHG+ QA+R+ L++FR G Sbjct: 278 LRQMISNGELKPRVVIFVQDIERAKALYTELLFDEIHVGVIHGELPQAKREEALAKFRKG 337 Query: 306 RCPILVATDVAARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDS 485 +L+ATD+ ARG+D +++V+N+DFP V Y+HRIGRTGRAG +G A TFF +D Sbjct: 338 EIWVLIATDLLARGIDFHGVKMVINFDFPQSVHSYIHRIGRTGRAGNTGQAVTFFTKEDG 397 Query: 486 KYASDLVKILEGANQAVSPEL 548 +Y +K++ G ++ E+ Sbjct: 398 EY----IKLIAGVMRSSGCEV 414
>RHLB_XYLFA (Q9PA24) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 543 Score = 100 bits (249), Expect = 4e-21 Identities = 58/154 (37%), Positives = 85/154 (55%), Gaps = 1/154 (0%) Frame = +3 Query: 60 ELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSRNLSRQ-YG 236 E V + Q + EK L +L + E G + ++F +TK + ++R L Y Sbjct: 225 ETVTTTRVRQRIYFPAEEEKIPLLLGLLSRSE-GMRTMVFVNTKVFVEGVARALDEAGYR 283 Query: 237 ASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTGVEDYVH 416 + GD Q +R+++L+ F+ G+ ILVATDVAARGL + + V NYD P EDYVH Sbjct: 284 VGVLSGDVPQRKRETLLNRFQKGQLEILVATDVAARGLHIDGVNYVYNYDLPFDAEDYVH 343 Query: 417 RIGRTGRAGASGIAYTFFCDQDSKYASDLVKILE 518 RIGRT R GA G A +F C++ + D+ +E Sbjct: 344 RIGRTARLGADGDAISFACERYAMSLPDIEAYIE 377
>RHLB_XYLFT (Q879Y6) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 543 Score = 100 bits (248), Expect = 5e-21 Identities = 58/154 (37%), Positives = 85/154 (55%), Gaps = 1/154 (0%) Frame = +3 Query: 60 ELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSRNLSRQ-YG 236 E V + Q + EK L +L + E G + ++F +TK + ++R L Y Sbjct: 225 ESVTTTRVRQRIYFPAEEEKIPLLLGLLSRNE-GMRTMVFVNTKVFVEGVARALDEAGYR 283 Query: 237 ASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTGVEDYVH 416 + GD Q +R+++L+ F+ G+ ILVATDVAARGL + + V NYD P EDYVH Sbjct: 284 VGVLSGDVPQRKRETLLNRFQKGQLEILVATDVAARGLHIDGVNYVYNYDLPFDAEDYVH 343 Query: 417 RIGRTGRAGASGIAYTFFCDQDSKYASDLVKILE 518 RIGRT R GA G A +F C++ + D+ +E Sbjct: 344 RIGRTARLGADGDAISFACERYAMSLPDIEAYIE 377
>RHLB_YERPS (Q66G19) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 428 Score = 99.8 bits (247), Expect = 7e-21 Identities = 59/136 (43%), Positives = 82/136 (60%), Gaps = 1/136 (0%) Frame = +3 Query: 108 SMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSRNLSRQ-YGASAIHGDKSQAERDSV 284 S E+ RL Q L ++E + IIF +TK C+++ +L+ + + GD +Q +R + Sbjct: 239 SNEEKMRLLQTLIEEEWPDRCIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRI 298 Query: 285 LSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYT 464 L +F G ILVATDVAARGL + + V NYD P EDYVHRIGRTGRAG SG + + Sbjct: 299 LEDFTKGDLDILVATDVAARGLHIPLVTHVFNYDLPDDCEDYVHRIGRTGRAGESGHSIS 358 Query: 465 FFCDQDSKYASDLVKI 512 C++ YA +L I Sbjct: 359 LACEE---YALNLPAI 371
>RHLB_YERPE (Q8ZAD8) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 428 Score = 99.8 bits (247), Expect = 7e-21 Identities = 59/136 (43%), Positives = 82/136 (60%), Gaps = 1/136 (0%) Frame = +3 Query: 108 SMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSRNLSRQ-YGASAIHGDKSQAERDSV 284 S E+ RL Q L ++E + IIF +TK C+++ +L+ + + GD +Q +R + Sbjct: 239 SNEEKMRLLQTLIEEEWPDRCIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRI 298 Query: 285 LSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYT 464 L +F G ILVATDVAARGL + + V NYD P EDYVHRIGRTGRAG SG + + Sbjct: 299 LEDFTKGDLDILVATDVAARGLHIPLVTHVFNYDLPDDCEDYVHRIGRTGRAGESGHSIS 358 Query: 465 FFCDQDSKYASDLVKI 512 C++ YA +L I Sbjct: 359 LACEE---YALNLPAI 371
>RRP3_YARLI (Q6CH58) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 480 Score = 99.4 bits (246), Expect = 9e-21 Identities = 60/166 (36%), Positives = 93/166 (56%), Gaps = 3/166 (1%) Frame = +3 Query: 36 PVNIGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLS- 212 PV + + + ++ QY+ K L ++ + G+ +IIF TK ++S Sbjct: 263 PVRVAVSTKYQTADNLLQYMVFCPFKHKDTHLVYLV-SENAGNSMIIFARTKSDTQRISL 321 Query: 213 --RNLSRQYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYD 386 RNL YGA +HGD SQ R L++F++G IL+ATDVA+RGLD+ + +V+NYD Sbjct: 322 LLRNLG--YGAIPLHGDLSQTARLGALNKFKSGSRNILIATDVASRGLDIPAVDLVINYD 379 Query: 387 FPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGA 524 P+ + Y+HR+GRT RAG +G + S+Y +L +EGA Sbjct: 380 IPSDSKSYIHRVGRTARAGRAGKSVALV----SQYDLELYLRIEGA 421
>PRP5_DEBHA (Q6BML1) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC| 3.6.1.-) Length = 913 Score = 99.4 bits (246), Expect = 9e-21 Identities = 52/120 (43%), Positives = 75/120 (62%), Gaps = 3/120 (2%) Frame = +3 Query: 165 KVIIFCSTKRMCDQLS-RNLSRQYGASAIHGDKSQAERDSVLSEFRTGRCP--ILVATDV 335 K++IF + D+L + L+ +Y AIHG K Q +R + EF + IL+AT + Sbjct: 576 KILIFVEKQIAADELLVKLLTEKYPCLAIHGGKDQIDRKHAIREFSSSNSGVNILIATSI 635 Query: 336 AARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKIL 515 AARGLDVK + +V+NY+ + +EDYVHR+GRTGRAG G A TF + + +DLVK + Sbjct: 636 AARGLDVKGLNLVINYEAASHMEDYVHRVGRTGRAGRKGTAITFVSSKQGRAITDLVKAM 695
>ABS_DROME (Q9V3C0) ATP-dependent RNA helicase abstrakt (EC 3.6.1.-) (DEAD box| protein abstrakt) Length = 619 Score = 99.4 bits (246), Expect = 9e-21 Identities = 58/146 (39%), Positives = 83/146 (56%), Gaps = 1/146 (0%) Frame = +3 Query: 30 PCPVNIGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQL 209 P +N+G A+ ++TQ VE K L L++ P V+IF K+ D + Sbjct: 389 PVTINVGRAG--AASMNVTQQVEYVKQEAKVVYLLDCLQKTAP--PVLIFAEKKQDVDCI 444 Query: 210 SRNLS-RQYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYD 386 L + A AIHG K Q ER + +R G+ +LVATDVA++GLD +++ V+NYD Sbjct: 445 HEYLLLKGVEAVAIHGGKDQEERSRAVDAYRVGKKDVLVATDVASKGLDFPNVQHVINYD 504 Query: 387 FPTGVEDYVHRIGRTGRAGASGIAYT 464 P +E+YVHRIGRTGR+ G+A T Sbjct: 505 MPDDIENYVHRIGRTGRSNTKGLATT 530
>IF4A_LEIBR (Q25225) Probable eukaryotic initiation factor 4A (EC 3.6.1.-)| (ATP-dependent RNA helicase eIF4A) (eIF-4A) Length = 403 Score = 98.6 bits (244), Expect = 2e-20 Identities = 52/152 (34%), Positives = 92/152 (60%), Gaps = 3/152 (1%) Frame = +3 Query: 36 PVNIGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGS--KVIIFCSTKRMCDQL 209 PV I E + + I Q+ ++E+ +LD ++ E S + +IF +T+R D + Sbjct: 227 PVRILVKRESLTLEGIKQFF---IAVEEEHKLDTLMDLYETVSIAQSVIFANTRRKVDWI 283 Query: 210 SRNLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYD 386 + L++ + S++H + +++R+ V++ FR+G +LV TD+ ARG+DV + +V+N+D Sbjct: 284 AEKLNQSNHTVSSMHAEMPKSDRERVMNTFRSGSSRVLVTTDLVARGIDVHHVNIVINFD 343 Query: 387 FPTGVEDYVHRIGRTGRAGASGIAYTFFCDQD 482 PT E+Y+HRIGR GR G G+A F ++D Sbjct: 344 LPTNKENYLHRIGRGGRYGVKGVAINFVTEKD 375
>H669_METJA (Q58083) Probable ATP-dependent RNA helicase MJ0669 (EC 3.6.1.-)| Length = 367 Score = 98.6 bits (244), Expect = 2e-20 Identities = 61/142 (42%), Positives = 87/142 (61%), Gaps = 3/142 (2%) Frame = +3 Query: 72 NKSITQ-YVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSRNLSRQYG--AS 242 N +I Q YVEV + E+ L ++L+ +E ++FC TKR +L+ L R G A Sbjct: 211 NANIEQSYVEVNEN-ERFEALCRLLKNKEFYG--LVFCKTKRDTKELASML-RDIGFKAG 266 Query: 243 AIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTGVEDYVHRI 422 AIHGD SQ++R+ V+ F+ + IL+ATDV +RG+DV D+ V+NY P E Y+HRI Sbjct: 267 AIHGDLSQSQREKVIRLFKQKKIRILIATDVMSRGIDVNDLNCVINYHLPQNPESYMHRI 326 Query: 423 GRTGRAGASGIAYTFFCDQDSK 488 GRTGRAG G A + ++ K Sbjct: 327 GRTGRAGKKGKAISIINRREYK 348
>DDX21_HUMAN (Q9NR30) Nucleolar RNA helicase 2 (EC 3.6.1.-) (Nucleolar RNA| helicase II) (Nucleolar RNA helicase Gu) (RH II/Gu) (Gu-alpha) (DEAD box protein 21) Length = 783 Score = 98.6 bits (244), Expect = 2e-20 Identities = 46/102 (45%), Positives = 67/102 (65%) Frame = +3 Query: 165 KVIIFCSTKRMCDQLSRNLSRQYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAAR 344 + IIFC TK+ +LS+N + + A ++HGD Q +R+ L FR G +LVAT+VAAR Sbjct: 440 RTIIFCETKKEAQELSQNSAIKQDAQSLHGDIPQKQREITLKGFRNGSFGVLVATNVAAR 499 Query: 345 GLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFF 470 GLD+ ++ +V+ P VE Y+HR GRTGRAG +G+ F+ Sbjct: 500 GLDIPEVDLVIQSSPPKDVESYIHRSGRTGRAGRTGVCICFY 541
>ROK1_KLULA (Q6CSW1) ATP-dependent RNA helicase ROK1 (EC 3.6.1.-)| Length = 579 Score = 98.6 bits (244), Expect = 2e-20 Identities = 61/173 (35%), Positives = 94/173 (54%), Gaps = 3/173 (1%) Frame = +3 Query: 30 PCPVNIGNTDELVANKSITQYVEVTTSMEKGR--RLDQILRQQEPGSKVIIFCSTKRMCD 203 P V IG+ + AN +I Q + V E+G+ + Q++ + E VIIF + Sbjct: 341 PIRVIIGHKE--AANINIDQQL-VFCGNEEGKLIAIRQLVLEGEFKPPVIIFLESITRAK 397 Query: 204 QLSRNLSR-QYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVN 380 L L + IH +++Q +RD ++ F++G L+ TDV ARG+D K + +V+N Sbjct: 398 ALFHELLYDKLNVDVIHAERTQVQRDKIIERFKSGDLWCLICTDVLARGVDFKGVNLVIN 457 Query: 381 YDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVS 539 YD P + YVHRIGRTGR G SG A TF+ QDS ++ +++ + VS Sbjct: 458 YDVPRSAQAYVHRIGRTGRGGRSGKAITFYTKQDSLAIKPIINVMKQSGCEVS 510
>ROK1_CRYNE (Q5KDK3) ATP-dependent RNA helicase ROK1 (EC 3.6.1.-)| Length = 620 Score = 98.6 bits (244), Expect = 2e-20 Identities = 44/94 (46%), Positives = 62/94 (65%) Frame = +3 Query: 243 AIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTGVEDYVHRI 422 A+HG K++ +RD + +FR G +LV T+V ARG+D + ++VV+NYDFP V Y+HRI Sbjct: 451 AVHGGKAKTKRDEAIKDFRVGAVWMLVVTEVLARGMDFRGVKVVINYDFPQTVPSYIHRI 510 Query: 423 GRTGRAGASGIAYTFFCDQDSKYASDLVKILEGA 524 GRTGRAG G A TFF +D Y + +L + Sbjct: 511 GRTGRAGRPGKAITFFNIEDGPYLRTIANVLRSS 544
>RHLB_IDILO (Q5QYF8) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 425 Score = 98.6 bits (244), Expect = 2e-20 Identities = 54/134 (40%), Positives = 81/134 (60%), Gaps = 1/134 (0%) Frame = +3 Query: 81 ITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSRNL-SRQYGASAIHGD 257 +T+ + + EK L ++ + P K I+F +TK C+++ L + ++ A + GD Sbjct: 230 VTEELFYPSKPEKFPLLLTLIEEDWP-DKAIVFANTKHGCEKVHGWLVANEHRAGLLTGD 288 Query: 258 KSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGR 437 Q +R +L +F G+ LVATDVAARGL + ++ V N+D P EDYVHRIGRTGR Sbjct: 289 VPQKKRLRILEDFAEGKLDFLVATDVAARGLHIPEVTHVYNFDLPDDCEDYVHRIGRTGR 348 Query: 438 AGASGIAYTFFCDQ 479 AGASG A + C++ Sbjct: 349 AGASGAAISLACEE 362
>ROK1_YEAST (P45818) ATP-dependent RNA helicase ROK1 (EC 3.6.1.-) (Rescuer of| KEM1 protein 1) Length = 564 Score = 98.2 bits (243), Expect = 2e-20 Identities = 59/173 (34%), Positives = 94/173 (54%), Gaps = 3/173 (1%) Frame = +3 Query: 30 PCPVNIGNTDELVANKSITQYVEVTTSMEKGR--RLDQILRQQEPGSKVIIFCSTKRMCD 203 P V IG+ + AN +I Q + + E+G+ + Q++++ E +IIF + Sbjct: 330 PVRVIIGHKE--AANTNIEQKL-IFCGNEEGKLIAIRQLVQEGEFKPPIIIFLESITRAK 386 Query: 204 QLSRNLSR-QYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVN 380 L L + IH +++ +RD ++ F+TG L+ TDV ARG+D K + +V+N Sbjct: 387 ALYHELMYDRINVDVIHAERTALQRDRIIERFKTGELWCLICTDVLARGIDFKGVNLVIN 446 Query: 381 YDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGANQAVS 539 YD P + YVHRIGRTGR G SG A TF+ QDS ++ +++ + VS Sbjct: 447 YDVPGSSQAYVHRIGRTGRGGRSGKAITFYTKQDSVAIKPIINVMKQSGCEVS 499
>ROK1_CANAL (Q9Y7C4) ATP-dependent RNA helicase CHR1 (EC 3.6.1.-)| Length = 578 Score = 98.2 bits (243), Expect = 2e-20 Identities = 61/181 (33%), Positives = 97/181 (53%), Gaps = 5/181 (2%) Frame = +3 Query: 30 PCPVNIGNTDELVANKSITQYVEVTTSMEKGRRLD--QILRQQEPGSKVIIFCSTKRMCD 203 P + IG+ + A+ +I Q + V T E+G+ L Q+++Q E +IIF + Sbjct: 336 PLRIIIGHKE--AASNTIDQKL-VFTGNEQGKLLAIRQMIQQGEFKPPIIIFLQSITRAK 392 Query: 204 QLSRNLSR-QYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVN 380 L L + IH +++ +R+ V+ F+ G +L+ TDV ARG+D K + +V+N Sbjct: 393 ALFHELLYDRLNVDVIHAERTPKQREEVIKRFKNGDIWVLITTDVLARGVDFKGVNLVIN 452 Query: 381 YDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILE--GANQAVSPELRA 554 YD P + YVHRIGRTGR G +G A TFF +D K ++ +++ G N S + Sbjct: 453 YDVPQSAQAYVHRIGRTGRGGKAGKAVTFFTKEDDKAIKPILNVMKQSGCNDGYSQWMED 512 Query: 555 M 557 M Sbjct: 513 M 513
>DDX47_MOUSE (Q9CWX9) Probable ATP-dependent RNA helicase DDX47 (EC 3.6.1.-)| (DEAD box protein 47) Length = 455 Score = 97.8 bits (242), Expect = 3e-20 Identities = 63/153 (41%), Positives = 85/153 (55%), Gaps = 4/153 (2%) Frame = +3 Query: 36 PVNIGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSR 215 PV + + + + QY S K L IL + G+ +IFCST C+ R Sbjct: 223 PVKCAVSSKYQTVEKLQQYYLFIPSKFKDTYLVYILNELA-GNSFMIFCST---CNNTQR 278 Query: 216 N--LSRQYGASAI--HGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNY 383 L R G +AI HG SQ++R L++F+ IL+ATDVA+RGLD+ + VVVN+ Sbjct: 279 TALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNF 338 Query: 384 DFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQD 482 D PT +DY+HR+GRT RAG SG A TF D Sbjct: 339 DIPTHSKDYIHRVGRTARAGRSGKAITFVTQYD 371
>DDX47_HUMAN (Q9H0S4) Probable ATP-dependent RNA helicase DDX47 (EC 3.6.1.-)| (DEAD box protein 47) Length = 455 Score = 97.8 bits (242), Expect = 3e-20 Identities = 63/153 (41%), Positives = 85/153 (55%), Gaps = 4/153 (2%) Frame = +3 Query: 36 PVNIGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSR 215 PV + + + + QY S K L IL + G+ +IFCST C+ R Sbjct: 223 PVKCAVSSKYQTVEKLQQYYIFIPSKFKDTYLVYILNELA-GNSFMIFCST---CNNTQR 278 Query: 216 N--LSRQYGASAI--HGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNY 383 L R G +AI HG SQ++R L++F+ IL+ATDVA+RGLD+ + VVVN+ Sbjct: 279 TALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLATDVASRGLDIPHVDVVVNF 338 Query: 384 DFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQD 482 D PT +DY+HR+GRT RAG SG A TF D Sbjct: 339 DIPTHSKDYIHRVGRTARAGRSGKAITFVTQYD 371
>DDX21_MOUSE (Q9JIK5) Nucleolar RNA helicase 2 (EC 3.6.1.-) (Nucleolar RNA| helicase II) (Nucleolar RNA helicase Gu) (RH II/Gu) (Gu-alpha) (DEAD box protein 21) Length = 851 Score = 97.8 bits (242), Expect = 3e-20 Identities = 47/106 (44%), Positives = 69/106 (65%) Frame = +3 Query: 165 KVIIFCSTKRMCDQLSRNLSRQYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAAR 344 + IIFC TK+ +LS+N + A ++HGD Q +R+ L FR G +LVAT+VAAR Sbjct: 512 RTIIFCETKKDAQELSQNTCIKQDAQSLHGDIPQKQREITLKGFRNGNFGVLVATNVAAR 571 Query: 345 GLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQD 482 GLD+ ++ +VV P VE Y+HR GRTGRAG +G+ F+ +++ Sbjct: 572 GLDIPEVDLVVQSCPPKDVESYIHRSGRTGRAGRTGVCICFYQNKE 617
>RRP3_CANGA (Q6FNK8) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 493 Score = 97.8 bits (242), Expect = 3e-20 Identities = 50/120 (41%), Positives = 74/120 (61%), Gaps = 1/120 (0%) Frame = +3 Query: 159 GSKVIIFCSTKRMCDQLSRNLSR-QYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDV 335 G VIIF TK ++LS + ++ A+A+HGD +Q +R L F+ G+ ILVATDV Sbjct: 313 GKTVIIFTRTKANAERLSGLCNLLEFSATALHGDLNQNQRTGALDLFKAGKRSILVATDV 372 Query: 336 AARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKIL 515 AARGLD+ + +V+NYD P + Y+HR+GRT RAG SG + + D + + ++L Sbjct: 373 AARGLDIPSVDIVINYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYDLELILRIEEVL 432
>RHLB_PSEPK (Q88NB7) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 398 Score = 97.1 bits (240), Expect = 4e-20 Identities = 54/143 (37%), Positives = 83/143 (58%), Gaps = 1/143 (0%) Frame = +3 Query: 60 ELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSRNLSRQ-YG 236 E VA++++ Q+V +K + L ++ Q + +V++F + K ++ L R Sbjct: 225 ENVASETVEQHVYAVAGSDKYKLLYNLVTQNK-WERVMVFANRKDEVRRIEEKLVRDGIN 283 Query: 237 ASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTGVEDYVH 416 A+ + GD Q +R L FR GR +LVATDVA RG+ + I V+N+ P +DYVH Sbjct: 284 AAQLSGDVPQHKRIRTLESFREGRITVLVATDVAGRGIHIDGISHVINFTLPEDPDDYVH 343 Query: 417 RIGRTGRAGASGIAYTFFCDQDS 485 RIGRTGRAG SG++ +F + DS Sbjct: 344 RIGRTGRAGTSGVSISFAGEDDS 366
>YN21_CAEEL (P34580) Putative ATP-dependent RNA helicase T26G10.1 in chromosome| III (EC 3.6.1.-) Length = 489 Score = 96.3 bits (238), Expect = 8e-20 Identities = 53/116 (45%), Positives = 72/116 (62%), Gaps = 2/116 (1%) Frame = +3 Query: 141 LRQQEPGSKVIIFCSTKRMCDQLSRNLSRQYGASAI--HGDKSQAERDSVLSEFRTGRCP 314 L + G+ I+FC+T Q++ L RQ G A+ HG SQ +R L++F++ Sbjct: 277 LLNEHAGNSAIVFCATCATTMQIAVML-RQLGMQAVPLHGQMSQEKRLGSLNKFKSKARE 335 Query: 315 ILVATDVAARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQD 482 ILV TDVAARGLD+ + +V+NYD P+ +DYVHR+GRT RAG SGIA T D Sbjct: 336 ILVCTDVAARGLDIPHVDMVINYDMPSQSKDYVHRVGRTARAGRSGIAITVVTQYD 391
>RRP3_KLULA (Q6CT85) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 487 Score = 96.3 bits (238), Expect = 8e-20 Identities = 48/110 (43%), Positives = 69/110 (62%), Gaps = 2/110 (1%) Frame = +3 Query: 159 GSKVIIFCSTKRMCDQLSRNLSR--QYGASAIHGDKSQAERDSVLSEFRTGRCPILVATD 332 G I+F TK +++S NL ++ A+A+HGD +Q +R L F+ G+ ILVATD Sbjct: 307 GKSTIVFTRTKANAERIS-NLCNLLEFSATALHGDLNQNQRTGALDLFKAGKRSILVATD 365 Query: 333 VAARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQD 482 VAARGLD+ + +V+NYD P + Y+HR+GRT RAG SG + + D Sbjct: 366 VAARGLDIPSVDIVINYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYD 415
>DDX50_HUMAN (Q9BQ39) ATP-dependent RNA helicase DDX50 (EC 3.6.1.-) (DEAD box| protein 50) (Nucleolar protein Gu2) (Gu-beta) Length = 737 Score = 95.9 bits (237), Expect = 1e-19 Identities = 45/102 (44%), Positives = 66/102 (64%) Frame = +3 Query: 165 KVIIFCSTKRMCDQLSRNLSRQYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAAR 344 + IIFC TK+ +++ N + A +HGD +Q++R+ L FR G +LVAT+VAAR Sbjct: 391 RAIIFCETKKNVTEMAMNPHIKQNAQCLHGDIAQSQREITLKGFREGSFKVLVATNVAAR 450 Query: 345 GLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFF 470 GLD+ ++ +V+ P VE Y+HR GRTGRAG +GI F+ Sbjct: 451 GLDIPEVDLVIQSSPPQDVESYIHRSGRTGRAGRTGICICFY 492
>DDX50_MOUSE (Q99MJ9) ATP-dependent RNA helicase DDX50 (EC 3.6.1.-) (DEAD box| protein 50) (Nucleolar protein Gu2) (Gu-beta) Length = 734 Score = 95.9 bits (237), Expect = 1e-19 Identities = 45/102 (44%), Positives = 66/102 (64%) Frame = +3 Query: 165 KVIIFCSTKRMCDQLSRNLSRQYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAAR 344 + IIFC TK+ +++ N + A +HGD +Q++R+ L FR G +LVAT+VAAR Sbjct: 388 RAIIFCETKKNVTEMAMNPHIKQNAQCLHGDIAQSQREITLKGFREGSFKVLVATNVAAR 447 Query: 345 GLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFF 470 GLD+ ++ +V+ P VE Y+HR GRTGRAG +GI F+ Sbjct: 448 GLDIPEVDLVIQSSPPQDVESYIHRSGRTGRAGRTGICVCFY 489
>RRP3_YEAST (P38712) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-) (Ribosomal| RNA-processing protein RRP3) Length = 501 Score = 95.5 bits (236), Expect = 1e-19 Identities = 50/120 (41%), Positives = 74/120 (61%), Gaps = 1/120 (0%) Frame = +3 Query: 159 GSKVIIFCSTKRMCDQLSRNLSR-QYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDV 335 G +IIF TK ++LS + ++ A+A+HGD +Q +R L F+ G+ ILVATDV Sbjct: 321 GKTMIIFTRTKANAERLSGLCNLLEFSATALHGDLNQNQRMGSLDLFKAGKRSILVATDV 380 Query: 336 AARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKIL 515 AARGLD+ + +VVNYD P + Y+HR+GRT RAG SG + + D + + ++L Sbjct: 381 AARGLDIPSVDIVVNYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYDLELILRIEEVL 440
>ROK1_ASHGO (Q75AE1) ATP-dependent RNA helicase ROK1 (EC 3.6.1.-)| Length = 569 Score = 95.5 bits (236), Expect = 1e-19 Identities = 58/166 (34%), Positives = 90/166 (54%), Gaps = 3/166 (1%) Frame = +3 Query: 30 PCPVNIGNTDELVANKSITQYVEVTTSMEKGR--RLDQILRQQEPGSKVIIFCSTKRMCD 203 P V IG+ + AN +I Q + V E+G+ + Q++++ VIIF + Sbjct: 332 PVRVIIGHKE--AANTNIEQKL-VFCGNEEGKLVAIRQLIQEGMFRPPVIIFLESITRAK 388 Query: 204 QLSRNLSR-QYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVN 380 L L + IH +++Q +R+ ++ F++G L+ TDV ARG+D K I +V+N Sbjct: 389 ALFHELLYDKLNVDVIHAERTQVQREKIIERFKSGDLWCLICTDVLARGIDFKGINLVIN 448 Query: 381 YDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILE 518 YD P + YVHRIGRTGR G G A TFF QD+ +V +++ Sbjct: 449 YDVPRSAQAYVHRIGRTGRGGRKGTAVTFFTKQDAIAVKPIVNVMK 494
>DBP8_NEUCR (Q7RYZ7) ATP-dependent RNA helicase dbp-8 (EC 3.6.1.-)| Length = 626 Score = 95.1 bits (235), Expect = 2e-19 Identities = 53/128 (41%), Positives = 72/128 (56%), Gaps = 1/128 (0%) Frame = +3 Query: 138 ILRQQEPGSKVIIFCSTKRMCDQLSRNLSR-QYGASAIHGDKSQAERDSVLSEFRTGRCP 314 +L Q VIIFC+ D L L + +++H Q++R L FR Sbjct: 443 LLTPQNVDKSVIIFCNRTSTADFLHHLLRLLDHRVTSLHSKLPQSQRIDNLGRFRASAAR 502 Query: 315 ILVATDVAARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYA 494 ILVATDVAARGLD+ ++++V+NYD P +DY+HR+GRT RAG G A TF +D Sbjct: 503 ILVATDVAARGLDIPEVKIVINYDIPRDPDDYIHRVGRTARAGRKGDAVTFVGQRD---- 558 Query: 495 SDLVKILE 518 DLV +E Sbjct: 559 VDLVLAIE 566
>ROK1_CANGA (Q6FN65) ATP-dependent RNA helicase ROK1 (EC 3.6.1.-)| Length = 565 Score = 95.1 bits (235), Expect = 2e-19 Identities = 57/173 (32%), Positives = 93/173 (53%), Gaps = 3/173 (1%) Frame = +3 Query: 9 ASXFAH*PCPVNIGNTDELVANKSITQYVEVTTSMEKGR--RLDQILRQQEPGSKVIIFC 182 A+ + P V IG+ + AN +I Q + + E+G+ + Q+++Q E +IIF Sbjct: 325 ANSIMNDPVRVIIGHKE--AANTNIEQKL-IFCGNEEGKLIAIRQLVQQGEFKPPIIIFL 381 Query: 183 STKRMCDQLSRNLSR-QYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVK 359 + L L + IH +++ +R+ ++ F+TG L+ TDV ARG+D K Sbjct: 382 ESIARAKALYHELMYDRINVDVIHAERTAIQREKIIERFKTGELWCLICTDVLARGIDFK 441 Query: 360 DIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILE 518 + +V+NYD PT + YVHRIGRTGR G SG A T + DS ++ +++ Sbjct: 442 GVNLVINYDVPTTAQAYVHRIGRTGRGGRSGKAVTLYTKLDSVAIKPIINVMK 494
>DDX52_HUMAN (Q9Y2R4) Probable ATP-dependent RNA helicase DDX52 (EC 3.6.1.-)| (DEAD box protein 52) (ATP-dependent RNA helicase ROK1-like) Length = 599 Score = 95.1 bits (235), Expect = 2e-19 Identities = 44/120 (36%), Positives = 70/120 (58%), Gaps = 1/120 (0%) Frame = +3 Query: 168 VIIFCSTKRMCDQLSRNLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAAR 344 V++F + +L L + IH +++Q +RD+ + FR G+ +L+ T + AR Sbjct: 415 VLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLAR 474 Query: 345 GLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGA 524 G+D K + +V+NYDFPT +Y+HRIGRTGRAG G A TFF + D + +++ A Sbjct: 475 GIDFKGVNLVINYDFPTSSVEYIHRIGRTGRAGNKGKAITFFTEDDKPLLRSVANVIQQA 534
>DDX52_RAT (Q99PT0) Probable ATP-dependent RNA helicase DDX52 (EC 3.6.1.-)| (DEAD box protein 52) (ATP-dependent RNA helicase ROK1-like) (rROK1L) Length = 598 Score = 95.1 bits (235), Expect = 2e-19 Identities = 55/172 (31%), Positives = 90/172 (52%), Gaps = 8/172 (4%) Frame = +3 Query: 33 CPVNIGN--TDELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGSK-----VIIFCSTK 191 C +N+ N + + A S + VE + G ++L +E K V++F + Sbjct: 365 CKLNLDNIVSVSIGARNSAVETVEQEL-LFVGSETGKLLAMRELVKKGFNPPVLVFVQSI 423 Query: 192 RMCDQLSRNLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIR 368 +L L + IH +++Q +RD+ + FR G+ +L+ T + ARG+D K + Sbjct: 424 ERAKELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVN 483 Query: 369 VVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGA 524 +V+NYDFPT +Y+HRIGRTGRAG G A TFF + D + +++ A Sbjct: 484 LVINYDFPTSSVEYIHRIGRTGRAGNRGKAVTFFTEDDKPLLRSVANVIQQA 535
>DDX52_MOUSE (Q8K301) Probable ATP-dependent RNA helicase DDX52 (EC 3.6.1.-)| (DEAD box protein 52) (ATP-dependent RNA helicase ROK1-like) Length = 598 Score = 95.1 bits (235), Expect = 2e-19 Identities = 55/172 (31%), Positives = 90/172 (52%), Gaps = 8/172 (4%) Frame = +3 Query: 33 CPVNIGN--TDELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGSK-----VIIFCSTK 191 C +N+ N + + A S + VE + G ++L +E K V++F + Sbjct: 365 CKLNLDNVISVSIGARNSAVETVEQEL-LFVGSETGKLLAMRELVKKGFKPPVLVFVQSI 423 Query: 192 RMCDQLSRNLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIR 368 +L L + IH +++Q +RD+ + FR G+ +L+ T + ARG+D K + Sbjct: 424 ERAKELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKGVN 483 Query: 369 VVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKILEGA 524 +V+NYDFPT +Y+HRIGRTGRAG G A TFF + D + +++ A Sbjct: 484 LVINYDFPTSSVEYIHRIGRTGRAGNRGKAVTFFTEDDKPLLRSVANVIQQA 535
>DEAD_HAEIN (P44586) Cold-shock DEAD box protein A homolog (EC 3.6.1.-)| (ATP-dependent RNA helicase deaD homolog) Length = 613 Score = 94.7 bits (234), Expect = 2e-19 Identities = 56/144 (38%), Positives = 84/144 (58%), Gaps = 4/144 (2%) Frame = +3 Query: 123 RRLDQILR--QQEPGSKVIIFCSTKRMCDQLSRNLSRQ-YGASAIHGDKSQAERDSVLSE 293 R+ + +LR + E IIF TK ++ L + + ++A++GD +Q R+ L Sbjct: 230 RKNEALLRFLEVEDFDAAIIFARTKTGTLDITELLEKNGFRSAALNGDMTQQLREQTLDR 289 Query: 294 FRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFC 473 R G I+VATDVAARG+D++ I +VVNYD P E YVHRIGRTGRAG SG A F Sbjct: 290 LRNGSLDIVVATDVAARGIDIERISLVVNYDIPLDAESYVHRIGRTGRAGRSGRALLFVE 349 Query: 474 DQDSKYASDLVKIL-EGANQAVSP 542 ++ + ++ ++ +G N+ P Sbjct: 350 PRERRLLRNIEHLMKKGINEVELP 373
>RRP3_ASPFU (Q4WJE9) ATP-dependent rRNA helicase rrp3 (EC 3.6.1.-)| Length = 472 Score = 94.7 bits (234), Expect = 2e-19 Identities = 52/109 (47%), Positives = 67/109 (61%), Gaps = 1/109 (0%) Frame = +3 Query: 159 GSKVIIFCSTKRMCDQLSRNL-SRQYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDV 335 G IIF T ++S L S +GA +HG SQ+ R L +FR+ ILVATDV Sbjct: 292 GQSTIIFTRTVHETQRISFLLRSLGFGAIPLHGQLSQSARLGALGKFRSRSRDILVATDV 351 Query: 336 AARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQD 482 AARGLD+ + VV+N+D PT + YVHR+GRT RAG SG+A +F D Sbjct: 352 AARGLDIPSVDVVLNFDLPTDSKTYVHRVGRTARAGKSGVAISFVTQYD 400
>DBP5_ASHGO (Q75C39) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-)| Length = 467 Score = 94.4 bits (233), Expect = 3e-19 Identities = 50/112 (44%), Positives = 70/112 (62%), Gaps = 7/112 (6%) Frame = +3 Query: 171 IIFCSTKRMCDQLSRNLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARG 347 IIF TK+ + L L R+ + S +HGD A+RD ++ +FR GR +L+ T+V ARG Sbjct: 320 IIFVQTKQTANMLYTELKREGHQVSILHGDLQSADRDRLIGDFREGRSKVLITTNVLARG 379 Query: 348 LDVKDIRVVVNYDFP---TGVED---YVHRIGRTGRAGASGIAYTFFCDQDS 485 +D+ + +VVNYD P G D YVHRIGRTGR G +G+A +F D+ S Sbjct: 380 IDIPTVSMVVNYDLPMTANGQPDPSTYVHRIGRTGRFGRTGVAISFIHDKKS 431
>RRP3_ASHGO (Q75EW9) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 487 Score = 94.4 bits (233), Expect = 3e-19 Identities = 47/120 (39%), Positives = 73/120 (60%), Gaps = 1/120 (0%) Frame = +3 Query: 159 GSKVIIFCSTKRMCDQLSRNLSR-QYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDV 335 G I+F TK +++S + ++ A+A+HGD +Q +R L F+ G+ ILVATDV Sbjct: 307 GKTTIVFTRTKANAERISGLCNLLEFSATALHGDLNQNQRTGALDLFKAGKKSILVATDV 366 Query: 336 AARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVKIL 515 AARGLD+ + +V+NYD P + Y+HR+GRT RAG SG + + D + + ++L Sbjct: 367 AARGLDIPSVDLVINYDIPVDSKSYIHRVGRTARAGRSGKSVSLVSQYDLELILRIEEVL 426
>DDX6_MOUSE (P54823) Probable ATP-dependent RNA helicase DDX6 (EC 3.6.1.-)| (DEAD box protein 6) (ATP-dependent RNA helicase p54) (Oncogene RCK homolog) Length = 483 Score = 94.4 bits (233), Expect = 3e-19 Identities = 54/155 (34%), Positives = 82/155 (52%), Gaps = 1/155 (0%) Frame = +3 Query: 21 AH*PCPVNIGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMC 200 +H P I +EL K +TQY T +K L+ + + + IIFC++ + Sbjct: 290 SHLQKPYEINLMEELTL-KGVTQYYAYVTERQKVHCLNTLFSRLQINQS-IIFCNSSQRV 347 Query: 201 DQLSRNLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVV 377 + L++ +S+ Y IH Q R+ V +FR G C LV TD+ RG+D++ + VV+ Sbjct: 348 ELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVI 407 Query: 378 NYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQD 482 N+DFP E Y+HRIGR+GR G G+A D Sbjct: 408 NFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDD 442
>DDX6_HUMAN (P26196) Probable ATP-dependent RNA helicase DDX6 (EC 3.6.1.-)| (DEAD box protein 6) (ATP-dependent RNA helicase p54) (Oncogene RCK) Length = 483 Score = 94.4 bits (233), Expect = 3e-19 Identities = 54/155 (34%), Positives = 82/155 (52%), Gaps = 1/155 (0%) Frame = +3 Query: 21 AH*PCPVNIGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMC 200 +H P I +EL K +TQY T +K L+ + + + IIFC++ + Sbjct: 290 SHLEKPYEINLMEELTL-KGVTQYYAYVTERQKVHCLNTLFSRLQINQS-IIFCNSSQRV 347 Query: 201 DQLSRNLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVV 377 + L++ +S+ Y IH Q R+ V +FR G C LV TD+ RG+D++ + VV+ Sbjct: 348 ELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVI 407 Query: 378 NYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQD 482 N+DFP E Y+HRIGR+GR G G+A D Sbjct: 408 NFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDD 442
>DBP5_YEAST (P20449) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-) (DEAD box| protein 5) (Helicase CA5/6) (Ribonucleic acid trafficking protein 8) Length = 482 Score = 94.4 bits (233), Expect = 3e-19 Identities = 62/157 (39%), Positives = 89/157 (56%), Gaps = 12/157 (7%) Frame = +3 Query: 51 NTDELVANK----SITQ-YVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSR 215 NT EL N+ +I Q Y++ +K L ++ GS IIF +TK+ + L Sbjct: 290 NTLELQTNEVNVDAIKQLYMDCKNEADKFDVLTELYGLMTIGSS-IIFVATKKTANVLYG 348 Query: 216 NL-SRQYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFP 392 L S + S +HGD ERD ++ +FR GR +L+ T+V ARG+D+ + +VVNYD P Sbjct: 349 KLKSEGHEVSILHGDLQTQERDRLIDDFREGRSKVLITTNVLARGIDIPTVSMVVNYDLP 408 Query: 393 T---GVED---YVHRIGRTGRAGASGIAYTFFCDQDS 485 T G D Y+HRIGRTGR G G+A +F D++S Sbjct: 409 TLANGQADPATYIHRIGRTGRFGRKGVAISFVHDKNS 445
>RRP3_USTMA (Q4P3U9) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 551 Score = 94.4 bits (233), Expect = 3e-19 Identities = 54/116 (46%), Positives = 70/116 (60%), Gaps = 2/116 (1%) Frame = +3 Query: 141 LRQQEPGSKVIIFCSTKRMCDQLSRNLSRQYGASAI--HGDKSQAERDSVLSEFRTGRCP 314 L ++ G +I+F T +LS L R G AI HG SQ R L++F+TG Sbjct: 337 LANEQAGHSIIVFTRTVHDSQRLSI-LLRLLGFPAIPLHGQLSQQARLGALNKFKTGGRS 395 Query: 315 ILVATDVAARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQD 482 ILVATDVA+RGLD+ + +VVNYD PT +DY+HR+GRT RAG SG + T D Sbjct: 396 ILVATDVASRGLDIPAVDLVVNYDIPTNSKDYIHRVGRTARAGRSGRSVTLVTQYD 451
>DBP5_CRYNE (Q5KBP5) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-)| Length = 546 Score = 94.4 bits (233), Expect = 3e-19 Identities = 50/124 (40%), Positives = 72/124 (58%), Gaps = 9/124 (7%) Frame = +3 Query: 171 IIFCSTKRMCDQLSRNL-SRQYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARG 347 I+FC K D ++ L S + +++HGDK ERD++L FR G +L+ T+V ARG Sbjct: 392 IVFCKRKVTADHIAERLISEGHAVASLHGDKLSQERDAILDGFRNGETKVLITTNVIARG 451 Query: 348 LDVKDIRVVVNYDFP--------TGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDL 503 +D+ + +VVNYD P +E Y+HRIGRTGR G G + F D SK SD+ Sbjct: 452 IDIPAVNMVVNYDVPDLGPGGNGPDIETYIHRIGRTGRFGRKGCSVIFTHDYRSK--SDV 509 Query: 504 VKIL 515 +I+ Sbjct: 510 ERIM 513
>PRP28_YEAST (P23394) Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) (Helicase CA8) Length = 588 Score = 94.4 bits (233), Expect = 3e-19 Identities = 52/132 (39%), Positives = 81/132 (61%), Gaps = 3/132 (2%) Frame = +3 Query: 81 ITQYVEVTTSME-KGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSRNLSRQYG--ASAIH 251 I Q VE + E K ++L I+ + +P +IIF + K+ D L+ ++ + +H Sbjct: 411 IQQVVEYADNDEDKFKKLKPIVAKYDP--PIIIFINYKQTADWLAEKFQKETNMKVTILH 468 Query: 252 GDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTGVEDYVHRIGRT 431 G KSQ +R+ L FRT + I++AT+VAARGLD+ ++ +VVN+ ++DY+HRIGRT Sbjct: 469 GSKSQEQREHSLQLFRTNKVQIMIATNVAARGLDIPNVSLVVNFQISKKMDDYIHRIGRT 528 Query: 432 GRAGASGIAYTF 467 GRA G A +F Sbjct: 529 GRAANEGTAVSF 540
>DDX6_XENLA (P54824) Probable ATP-dependent RNA helicase DDX6 (EC 3.6.1.-)| (DEAD box protein 6) (ATP-dependent RNA helicase p54) (Xp54) Length = 481 Score = 94.0 bits (232), Expect = 4e-19 Identities = 53/150 (35%), Positives = 80/150 (53%), Gaps = 1/150 (0%) Frame = +3 Query: 36 PVNIGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSR 215 P I +EL K +TQY T +K L+ + + + IIFC++ + + L++ Sbjct: 294 PYEINLMEELTL-KGVTQYYAYVTERQKVHCLNTLFSRLQINQS-IIFCNSSQRVELLAK 351 Query: 216 NLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFP 392 +S+ Y IH Q R+ V +FR G C LV TD+ RG+D++ + VV+N+DFP Sbjct: 352 KISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFP 411 Query: 393 TGVEDYVHRIGRTGRAGASGIAYTFFCDQD 482 E Y+HRIGR+GR G G+A D Sbjct: 412 KLAETYLHRIGRSGRFGHLGLAINLITYDD 441
>RRP3_DEBHA (Q6BQ61) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 477 Score = 93.2 bits (230), Expect = 6e-19 Identities = 56/153 (36%), Positives = 86/153 (56%), Gaps = 4/153 (2%) Frame = +3 Query: 36 PVNIGNTDELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSR 215 PV + +++ ++ Q + + + K L +L + G +IIF T C R Sbjct: 264 PVRVAVSNKYQTADNLVQSMMLVSDGYKNTYLIHLLNEFL-GKSIIIFTRT---CAHSQR 319 Query: 216 N--LSRQYGASAI--HGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNY 383 L+R G SA+ HG +QA+R L++F+ G+ IL+ATDVAARGLD+ + +V+NY Sbjct: 320 TALLARILGFSAVPLHGQLTQAQRLGSLNKFKAGKANILIATDVAARGLDIPSVDIVINY 379 Query: 384 DFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQD 482 D PT + Y+HR+GRT RAG SG + + D Sbjct: 380 DIPTDSKAYIHRVGRTARAGKSGKSISLITQYD 412
>DBP8_ASPOR (Q2UKX3) ATP-dependent RNA helicase dbp8 (EC 3.6.1.-)| Length = 443 Score = 93.2 bits (230), Expect = 6e-19 Identities = 48/105 (45%), Positives = 66/105 (62%), Gaps = 1/105 (0%) Frame = +3 Query: 171 IIFCSTKRMCDQLSRNLSR-QYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARG 347 IIFC+ + D L R L R + +++H Q+ER+S L+ FR ILVATDVA+RG Sbjct: 272 IIFCNHTKTADLLERMLRRLSHRVTSLHSLLPQSERNSNLARFRASAARILVATDVASRG 331 Query: 348 LDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQD 482 LD+ + +V+N+D P +DYVHR+GRT RAG G A T +D Sbjct: 332 LDIPSVSLVINFDVPRNPDDYVHRVGRTARAGRHGEAVTLVGQRD 376
>RRP3_GIBZE (Q4IFI0) ATP-dependent rRNA helicase RRP3 (EC 3.6.1.-)| Length = 486 Score = 92.8 bits (229), Expect = 8e-19 Identities = 50/115 (43%), Positives = 69/115 (60%), Gaps = 1/115 (0%) Frame = +3 Query: 141 LRQQEPGSKVIIFCSTKRMCDQLSRNL-SRQYGASAIHGDKSQAERDSVLSEFRTGRCPI 317 L + G I+F T ++S L + +GA +HG SQ+ R L++FR+G I Sbjct: 294 LINEHAGQSTIVFTRTVWETQRVSILLRTLGFGAIPLHGQLSQSSRLGALNKFRSGTRDI 353 Query: 318 LVATDVAARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQD 482 LVATDVAARGLD+ + VV+NYD P + Y+HR+GRT RAG SG+A + D Sbjct: 354 LVATDVAARGLDIPSVDVVLNYDLPQDSKTYIHRVGRTARAGKSGVAISLVTQYD 408
>DBP8_ASPFU (Q4WXW1) ATP-dependent RNA helicase dbp8 (EC 3.6.1.-)| Length = 526 Score = 92.8 bits (229), Expect = 8e-19 Identities = 47/105 (44%), Positives = 66/105 (62%), Gaps = 1/105 (0%) Frame = +3 Query: 171 IIFCSTKRMCDQLSRNLSR-QYGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARG 347 I+FC+ + D L R L R + +++H Q+ER++ L+ FR ILVATDVA+RG Sbjct: 355 IVFCNHTKTADLLERMLRRLSHRVTSLHSLLPQSERNANLARFRASAARILVATDVASRG 414 Query: 348 LDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQD 482 LD+ + +V+NYD P +DYVHR+GRT RAG G A T +D Sbjct: 415 LDIPTVSLVINYDVPRNPDDYVHRVGRTARAGRRGEAVTLVGQRD 459
>DBP8_GIBZE (Q4I662) ATP-dependent RNA helicase DBP8 (EC 3.6.1.-)| Length = 547 Score = 92.8 bits (229), Expect = 8e-19 Identities = 50/141 (35%), Positives = 78/141 (55%), Gaps = 1/141 (0%) Frame = +3 Query: 90 YVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSRNLSR-QYGASAIHGDKSQ 266 Y++V + ++ +L + VI+FC+ D L L ++ +++H Q Sbjct: 348 YIKVPVTHKEHYLHTFLLTEANVDKTVILFCNRTSTADYLHHLLRMLEHRVTSLHSKLPQ 407 Query: 267 AERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGA 446 +R L+ FR ILVATDVAARGLD+ ++ +V+NYD P +DY+HR+GRT RAG Sbjct: 408 RQRIDNLARFRASAARILVATDVAARGLDIPEVSLVINYDLPRDPDDYIHRVGRTARAGR 467 Query: 447 SGIAYTFFCDQDSKYASDLVK 509 G A +F +D + A + K Sbjct: 468 KGEAVSFVGQRDVELALTIEK 488
>DBP5_YARLI (Q6C3X7) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-)| Length = 488 Score = 92.8 bits (229), Expect = 8e-19 Identities = 55/152 (36%), Positives = 88/152 (57%), Gaps = 8/152 (5%) Frame = +3 Query: 78 SITQ-YVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSRNLSRQ-YGASAIH 251 +ITQ Y++ EK + L+++ S VI F + + + L + +S+ + S +H Sbjct: 309 AITQLYMDCEDGEEKFKMLEELYSMLTIASSVI-FVAQRSTANALYQRMSKNGHKVSLLH 367 Query: 252 GDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPT------GVEDYV 413 D S ERD ++ +FR GR +L++T+V ARG+D+ + +VVNYD PT E Y+ Sbjct: 368 SDLSVDERDRLMDDFRFGRSKVLISTNVIARGIDIATVSMVVNYDLPTDKNGKPDPETYL 427 Query: 414 HRIGRTGRAGASGIAYTFFCDQDSKYASDLVK 509 HRIGRTGR G SG++ +F D+ S D ++ Sbjct: 428 HRIGRTGRFGRSGVSISFVHDEASFEVLDSIQ 459
>DBP5_KLULA (Q6CJU1) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-)| Length = 469 Score = 92.8 bits (229), Expect = 8e-19 Identities = 49/112 (43%), Positives = 70/112 (62%), Gaps = 7/112 (6%) Frame = +3 Query: 171 IIFCSTKRMCDQLSRNLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARG 347 IIF TK+ + L L ++ + S +HGD +RD ++ +FR GR +L+ T+V ARG Sbjct: 321 IIFVKTKQTANLLYAKLKKEGHQVSILHGDLQSQDRDRLIDDFREGRSKVLITTNVLARG 380 Query: 348 LDVKDIRVVVNYDFPT---GVED---YVHRIGRTGRAGASGIAYTFFCDQDS 485 +D+ + +VVNYD PT G D YVHRIGRTGR G +G+A +F D+ S Sbjct: 381 IDIPSVSMVVNYDLPTLPNGQADPSTYVHRIGRTGRFGRTGVAISFIHDKKS 432
>DRS1_USTMA (Q4P9P3) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)| Length = 932 Score = 92.4 bits (228), Expect = 1e-18 Identities = 49/118 (41%), Positives = 74/118 (62%), Gaps = 2/118 (1%) Frame = +3 Query: 162 SKVIIFCSTKRMCDQLSRNLSRQYGASA--IHGDKSQAERDSVLSEFRTGRCPILVATDV 335 S+ +IF +K++ QL + + G SA +HGD SQ +R L++FR G+ L+ATD+ Sbjct: 612 SQTMIFVRSKKLAHQL-KIVFGLLGLSAGELHGDLSQEQRIDALTDFRDGKTDFLLATDL 670 Query: 336 AARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQDSKYASDLVK 509 A+RGLD+K ++ V+NYD P E Y+HR+GRT RAG +G A T + D + +K Sbjct: 671 ASRGLDIKGVQTVINYDMPGQFEAYLHRVGRTARAGRNGRAVTLVGEADRRMLKLAIK 728
>RRP3_ASPOR (Q2UNB7) ATP-dependent rRNA helicase rrp3 (EC 3.6.1.-)| Length = 472 Score = 92.4 bits (228), Expect = 1e-18 Identities = 51/109 (46%), Positives = 66/109 (60%), Gaps = 1/109 (0%) Frame = +3 Query: 159 GSKVIIFCSTKRMCDQLSRNLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDV 335 G IIFC T +LS L +GA +HG SQ+ R L +FR+ ILVATDV Sbjct: 292 GQSCIIFCRTVHETQRLSFFLRLLGFGAIPLHGQLSQSARLGALGKFRSRSRDILVATDV 351 Query: 336 AARGLDVKDIRVVVNYDFPTGVEDYVHRIGRTGRAGASGIAYTFFCDQD 482 AARGLD+ + VV+N+D P + ++HRIGRT RAG SG+A +F D Sbjct: 352 AARGLDIPSVDVVLNFDLPGDSKTFIHRIGRTARAGKSGVAISFATQYD 400
>DBP5_USTMA (Q4P7Z8) ATP-dependent RNA helicase DBP5 (EC 3.6.1.-)| Length = 456 Score = 92.4 bits (228), Expect = 1e-18 Identities = 46/124 (37%), Positives = 77/124 (62%), Gaps = 8/124 (6%) Frame = +3 Query: 171 IIFCSTKRMCDQLSRNLSRQ-YGASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARG 347 IIFC+ + D++++ ++++ + ++HG A+RD + FR G+ +L++T+V ARG Sbjct: 306 IIFCAKRETADRIAQKMTQEGHKVDSLHGRLETADRDRTIDAFRDGKSKVLISTNVIARG 365 Query: 348 LDVKDIRVVVNYDFP---TG---VEDYVHRIGRTGRAGASGIAYTFFCDQDS-KYASDLV 506 +D++ + +V+NYD P TG E Y+HRIGRTGR G G++ F DQ S Y + Sbjct: 366 IDIQQVTLVINYDMPLTQTGEADAETYLHRIGRTGRFGRKGVSINFVHDQQSWSYMDQIE 425 Query: 507 KILE 518 K L+ Sbjct: 426 KALK 429
>RHLB_PSEAE (Q9HXE5) ATP-dependent RNA helicase rhlB (EC 3.6.1.-)| Length = 397 Score = 92.0 bits (227), Expect = 1e-18 Identities = 52/143 (36%), Positives = 82/143 (57%), Gaps = 1/143 (0%) Frame = +3 Query: 60 ELVANKSITQYVEVTTSMEKGRRLDQILRQQEPGSKVIIFCSTKRMCDQLSRNLSRQ-YG 236 E VA+ ++ Q+V +K + L ++ Q +V++F + K ++ L++ Sbjct: 225 ENVASDTVEQHVYAVAGSDKYKLLYNLVAQNN-WERVMVFANRKDEVRRIEERLTKDGIS 283 Query: 237 ASAIHGDKSQAERDSVLSEFRTGRCPILVATDVAARGLDVKDIRVVVNYDFPTGVEDYVH 416 A+ + GD Q +R L FR G+ +LVATDVA RG+ + I V+N+ P +DYVH Sbjct: 284 AAQMSGDVPQHKRIRTLEGFREGKIRVLVATDVAGRGIHIDGISHVINFTLPEDPDDYVH 343 Query: 417 RIGRTGRAGASGIAYTFFCDQDS 485 RIGRTGRAGASG + +F + D+ Sbjct: 344 RIGRTGRAGASGTSISFAGEDDA 366 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 96,096,687 Number of Sequences: 219361 Number of extensions: 2001500 Number of successful extensions: 5853 Number of sequences better than 10.0: 500 Number of HSP's better than 10.0 without gapping: 5491 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5661 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6598423128 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
