>DOCK5_HUMAN (Q9H7D0) Dedicator of cytokinesis protein 5 (Fragment)|
          Length = 804

 Score = 30.8 bits (68), Expect = 0.99
 Identities = 19/59 (32%), Positives = 26/59 (44%)
 Frame = -1

Query: 207 LRTNAVGGTPENPXP*PDSRSPTGWSRI*XATSLSAPSPTRVPLFMPSPSVDSGRPLGL 31
           L+T+ +  TP  P P P S+   G  R   +T L+ P P R     P P     R  G+
Sbjct: 740 LQTDGIAATPVPPPPPPKSKPYEGSQR--NSTELAPPLPVRREAKAPPPPPPKARKSGI 796

>PER1_MOUSE (O35973) Period circadian protein 1 (Circadian pacemaker protein|
           Rigui) (mPER) (M-Rigui)
          Length = 1291

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -1

Query: 102 APSPTRVPLFMPSPSVDSGRPLGLFSAI 19
           APSP   P   P P+ D+ RP+GL  A+
Sbjct: 755 APSPAPSPTVAPDPTPDAYRPVGLTKAV 782

>PER1_RAT (Q8CHI5) Period circadian protein 1 (rPER1) (Fragment)|
          Length = 1244

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -1

Query: 102 APSPTRVPLFMPSPSVDSGRPLGLFSAI 19
           APSP   P   P P+ D+ RP+GL  A+
Sbjct: 754 APSPAPSPTVAPDPAPDAYRPVGLTKAV 781

>PER1_HUMAN (O15534) Period circadian protein 1 (Circadian pacemaker protein|
           Rigui) (hPER)
          Length = 1290

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -1

Query: 102 APSPTRVPLFMPSPSVDSGRPLGLFSAI 19
           APSP   P   P P+ D+ RP+GL  A+
Sbjct: 755 APSPAPSPTVAPDPAPDAYRPVGLTKAV 782

>RUVB1_GIBZE (Q4ICA8) RuvB-like helicase 1 (EC 3.6.1.-)|
          Length = 458

 Score = 29.3 bits (64), Expect = 2.9
 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = +2

Query: 8   DEEPMAENNPRGLPLSTDGEGMKRGTR-VGEGALREVAXYILDHPVGDRESGHGSGFSGV 184
           D    A  + +GL L +DG   K+    VG+ A RE    ++D     + +G G   +G 
Sbjct: 13  DNRTAAHTHIKGLGLKSDGYAEKQAAGFVGQAAARESCGVVVDLIRAQKMAGRGVLLAGG 72

Query: 185 PPT 193
           P T
Sbjct: 73  PGT 75

>ELI6_HORVU (P14896) Low molecular mass early light-inducible protein HV60,|
           chloroplast precursor (ELIP)
          Length = 167

 Score = 28.9 bits (63), Expect = 3.8
 Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
 Frame = -1

Query: 219 PLCKLRTNAVGGTPENPXP*PDSRSPTGWSRI*XATSLSAPSPTRVPL------FMPSPS 58
           P    RT  V    E P   P ++ P   + I  A + S P+P R+        F+ + +
Sbjct: 25  PALGRRTLVVRAQTEGPNAPPPNK-PKASTSIWDAMAFSGPAPERINGRLAMVGFVTALA 83

Query: 57  VDSGRPLGLFSAIGSSS 7
           V++GR  GL S +GS +
Sbjct: 84  VEAGRGDGLLSQLGSGT 100

>NCOA6_MOUSE (Q9JL19) Nuclear receptor coactivator 6 (Amplified in breast cancer|
            protein 3) (Cancer-amplified transcriptional coactivator
            ASC-2) (Activating signal cointegrator 2) (ASC-2)
            (Peroxisome proliferator-activated receptor-interacting
            protein) (P
          Length = 2067

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = -1

Query: 105  SAPSPTRVPLFMPSPSVDSGRPLGLFS 25
            SAP    VP   P+P++ +GRPL L S
Sbjct: 1713 SAPVTPNVPSSSPAPNIQTGRPLVLSS 1739

>CHI2_COCIM (P54197) Endochitinase 2 precursor (EC 3.2.1.14)|
          Length = 860

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -1

Query: 171 PXP*PDSRSPTGWSRI*XATSLSAPSPTRVPLFMPSPS 58
           P P   +  P GW+ I       AP+PT V L +P+ S
Sbjct: 715 PIPGAPAPPPDGWTTIVTVCPQCAPTPTTVTLTVPTRS 752

>ABR_HUMAN (Q12979) Active breakpoint cluster region-related protein|
          Length = 859

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 5/60 (8%)
 Frame = +2

Query: 59  DGEGMKRGTRVGEGALREVAXYILDHP-----VGDRESGHGSGFSGVPPTALVRSLHRGK 223
           DGEG +      EG+  E   YI + P     +  R  G G G S  PP  L   +  GK
Sbjct: 30  DGEGNEEQKGPPEGS--ETMPYIDESPTMSPQLSARSQGRGDGVSPTPPEGLAPGVEAGK 87

>GEI8_CAEEL (P34333) Gex-3-interacting protein 8|
          Length = 1780

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -1

Query: 117  ATSLSAPSPTRVPLFMPSPSV 55
            A S++AP+P   P  MPSPSV
Sbjct: 1644 AASIAAPTPISTPHAMPSPSV 1664

>METE_AERPE (Q9YA91) Probable methylcobalamin:homocysteine methyltransferase|
           (EC 2.1.1.-) (Methionine synthase)
          Length = 332

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 18/47 (38%), Positives = 22/47 (46%)
 Frame = +2

Query: 2   PIDEEPMAENNPRGLPLSTDGEGMKRGTRVGEGALREVAXYILDHPV 142
           P  EE  AE     L +   G G KR   +  G L  +  YILD+PV
Sbjct: 191 PFKEE--AELLKEALDIIFKGVGAKRIVHICYGELERILPYILDYPV 235

>PPCKM_CHICK (P21642) Phosphoenolpyruvate carboxykinase [GTP], mitochondrial|
           precursor (EC 4.1.1.32) (Phosphoenolpyruvate
           carboxylase) (PEPCK-M)
          Length = 640

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 16/48 (33%), Positives = 22/48 (45%)
 Frame = +2

Query: 2   PIDEEPMAENNPRGLPLSTDGEGMKRGTRVGEGALREVAXYILDHPVG 145
           PID        PRG+PL  +  G + G  +G  A+R  A    +H  G
Sbjct: 445 PIDAIIFGGRRPRGVPLVVEAFGWRHGVFMG-SAMRSEATAAAEHKGG 491

>M556_METJA (Q57976) Methylated protein MJ0556|
          Length = 173

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +2

Query: 14  EPMAENNPRGLPLSTDGEGMKRGTRVGEGALREVAXYILDHP 139
           + M ++N  G+P+  D     RG  +G   LRE+  Y+  HP
Sbjct: 46  DEMIKHNISGMPVVDD-----RGVMIGFITLREIRKYMTSHP 82

>HAP1_MOUSE (O35668) Huntingtin-associated protein 1 (HAP-1)|
          Length = 628

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 10/63 (15%)
 Frame = +2

Query: 14  EPMAENNPRGLPLSTDGEGMKRGTRVGEGAL----------REVAXYILDHPVGDRESGH 163
           EP AE  P+  P    G G K G+R   G+                Y+   P G R +G 
Sbjct: 36  EPSAE--PKPAPAQGTGSGQKSGSRTKTGSFCRSMIIGDSDAPWTRYVFQGPYGPRATGL 93

Query: 164 GSG 172
           G+G
Sbjct: 94  GTG 96

>CAP1_PIG (P40125) Adenylyl cyclase-associated protein 1 (CAP 1) (ASP-56|
           protein) (Fragments)
          Length = 233

 Score = 27.7 bits (60), Expect = 8.4
 Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
 Frame = +2

Query: 62  GEGMKRGTRVGEGALREVAXYILDHPVGDRESGHGSG---FSGVPPTALVRSLHRGKS 226
           G+ +K    V  G L+E        PV    SG  SG    SG PP+AL   +H+G+S
Sbjct: 24  GDVLKHAEMVHTG-LKEYKDVDKXGPVAKELSGLPSGPSAGSGPPPSALFAQIHQGES 80

>4ET_HUMAN (Q9NRA8) Eukaryotic translation initiation factor 4E transporter|
           (eIF4E transporter) (4E-T) (Eukaryotic translation
           initiation factor 4E nuclear import factor 1)
          Length = 985

 Score = 27.7 bits (60), Expect = 8.4
 Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = +2

Query: 41  GLPLSTDGEGMKR--GTRVGEGALREVAXYILDHPVGDRE 154
           G PL  D +G++   G R+G G +     +  DH + D++
Sbjct: 137 GSPLEKDSDGLRLLGGRRIGSGRIISARTFEKDHRLSDKD 176

>4ET_MOUSE (Q9EST3) Eukaryotic translation initiation factor 4E transporter|
           (eIF4E transporter) (4E-T) (Eukaryotic translation
           initiation factor 4E nuclear import factor 1)
          Length = 983

 Score = 27.7 bits (60), Expect = 8.4
 Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = +2

Query: 41  GLPLSTDGEGMKR--GTRVGEGALREVAXYILDHPVGDRE 154
           G PL  D +G++   G R+G G +     +  DH + D++
Sbjct: 136 GSPLEKDSDGLRLLGGRRIGSGRIISARAFEKDHRLSDKD 175


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,382,683
Number of Sequences: 219361
Number of extensions: 726925
Number of successful extensions: 2209
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2205
length of database: 80,573,946
effective HSP length: 51
effective length of database: 69,386,535
effective search space used: 1665276840
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)