ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd24k03 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1178 bits (594), Expect = 0.0 Identities = 603/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Minus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119507 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 119448 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 119447 gggaacggaacccaccgg-agccgtagcgaaagcgagtcttaatagggcgattgtcactg 119389 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119388 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 119329 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119328 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 119269 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119268 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 119209 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119208 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 119149 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119148 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 119089 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119088 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 119029 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119028 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 118969 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118968 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 118909 Query: 601 aagat 605 ||||| Sbjct: 118908 aagat 118904 Score = 1178 bits (594), Expect = 0.0 Identities = 603/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95387 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 95446 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 95447 gggaacggaacccaccgg-agccgtagcgaaagcgagtcttaatagggcgattgtcactg 95505 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95506 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 95565 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95566 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 95625 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95626 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 95685 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95686 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 95745 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95746 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 95805 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95806 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 95865 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95866 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 95925 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95926 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 95985 Query: 601 aagat 605 ||||| Sbjct: 95986 aagat 95990
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1170 bits (590), Expect = 0.0 Identities = 602/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Minus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118288 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 118229 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 118228 gggaacggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 118170 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118169 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 118110 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118109 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 118050 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118049 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 117990 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117989 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 117930 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117929 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 117870 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117869 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 117810 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117809 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 117750 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117749 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 117690 Query: 601 aagat 605 ||||| Sbjct: 117689 aagat 117685
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1170 bits (590), Expect = 0.0 Identities = 602/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Minus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119372 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 119313 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 119312 gggaacggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 119254 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119253 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 119194 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119193 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 119134 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119133 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 119074 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119073 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 119014 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119013 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 118954 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118953 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 118894 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118893 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 118834 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118833 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 118774 Query: 601 aagat 605 ||||| Sbjct: 118773 aagat 118769 Score = 1170 bits (590), Expect = 0.0 Identities = 602/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95784 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 95843 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 95844 gggaacggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 95902 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95903 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 95962 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95963 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 96022 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96023 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 96082 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96083 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 96142 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96143 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 96202 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96203 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 96262 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96263 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 96322 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96323 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 96382 Query: 601 aagat 605 ||||| Sbjct: 96383 aagat 96387
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1170 bits (590), Expect = 0.0 Identities = 602/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Minus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119372 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 119313 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 119312 gggaacggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 119254 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119253 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 119194 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119193 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 119134 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119133 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 119074 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119073 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 119014 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119013 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 118954 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118953 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 118894 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118893 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 118834 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118833 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 118774 Query: 601 aagat 605 ||||| Sbjct: 118773 aagat 118769 Score = 1170 bits (590), Expect = 0.0 Identities = 602/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95784 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 95843 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 95844 gggaacggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 95902 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95903 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 95962 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95963 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 96022 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96023 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 96082 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96083 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 96142 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96143 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 96202 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96203 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 96262 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96263 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 96322 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96323 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 96382 Query: 601 aagat 605 ||||| Sbjct: 96383 aagat 96387
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1170 bits (590), Expect = 0.0 Identities = 602/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Minus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119321 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 119262 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 119261 gggaacggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 119203 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119202 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 119143 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119142 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 119083 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119082 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 119023 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119022 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 118963 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118962 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 118903 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118902 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 118843 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118842 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 118783 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118782 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 118723 Query: 601 aagat 605 ||||| Sbjct: 118722 aagat 118718 Score = 1170 bits (590), Expect = 0.0 Identities = 602/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95729 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 95788 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 95789 gggaacggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 95847 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95848 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 95907 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95908 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 95967 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95968 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 96027 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96028 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 96087 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96088 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 96147 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96148 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 96207 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96208 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 96267 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96268 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 96327 Query: 601 aagat 605 ||||| Sbjct: 96328 aagat 96332
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1170 bits (590), Expect = 0.0 Identities = 602/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508362 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 31508421 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 31508422 gggaacggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 31508480 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508481 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 31508540 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508541 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 31508600 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508601 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 31508660 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508661 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 31508720 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508721 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 31508780 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508781 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 31508840 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508841 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 31508900 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508901 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 31508960 Query: 601 aagat 605 ||||| Sbjct: 31508961 aagat 31508965 Score = 359 bits (181), Expect = 7e-96 Identities = 181/181 (100%) Strand = Plus / Minus Query: 425 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513317 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11513258 Query: 485 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513257 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 11513198 Query: 545 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 604 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513197 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 11513138 Query: 605 t 605 | Sbjct: 11513137 t 11513137 Score = 157 bits (79), Expect = 5e-35 Identities = 79/79 (100%) Strand = Plus / Minus Query: 527 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320663 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 27320604 Query: 587 gcgcccttgcgctgaagat 605 ||||||||||||||||||| Sbjct: 27320603 gcgcccttgcgctgaagat 27320585 Score = 133 bits (67), Expect = 7e-28 Identities = 73/75 (97%) Strand = Plus / Minus Query: 441 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 500 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25722178 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25722119 Query: 501 taaaggaggtggggg 515 ||||||||||||||| Sbjct: 25722118 taaaggaggtggggg 25722104 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 444 gtcgagagggaaacagcccggatcaccagctaaggccc 481 |||||||||||||||||||||||||||||||||||||| Sbjct: 28582253 gtcgagagggaaacagcccggatcaccagctaaggccc 28582290 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 343 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 397 |||| ||||||||||||||| |||||| |||||| || |||||||| |||||||| Sbjct: 35945442 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacctaaaaataa 35945496
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1170 bits (590), Expect = 0.0 Identities = 602/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Minus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84234 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 84175 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 84174 gggaacggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 84116 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84115 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 84056 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84055 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 83996 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83995 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 83936 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83935 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 83876 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83875 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 83816 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83815 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 83756 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83755 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 83696 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83695 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 83636 Query: 601 aagat 605 ||||| Sbjct: 83635 aagat 83631
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1170 bits (590), Expect = 0.0 Identities = 602/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Minus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119341 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 119282 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 119281 gggaacggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 119223 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119222 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 119163 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119162 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 119103 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119102 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 119043 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119042 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 118983 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118982 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 118923 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118922 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 118863 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118862 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 118803 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118802 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 118743 Query: 601 aagat 605 ||||| Sbjct: 118742 aagat 118738 Score = 1170 bits (590), Expect = 0.0 Identities = 602/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95777 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 95836 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 95837 gggaacggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 95895 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95896 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 95955 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95956 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 96015 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96016 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 96075 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96076 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 96135 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96136 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 96195 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96196 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 96255 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96256 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 96315 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96316 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 96375 Query: 601 aagat 605 ||||| Sbjct: 96376 aagat 96380
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1170 bits (590), Expect = 0.0 Identities = 602/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14551 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 14610 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 14611 gggaacggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 14669 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14670 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 14729 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14730 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 14789 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14790 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 14849 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14850 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 14909 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14910 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 14969 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14970 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 15029 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15030 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 15089 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15090 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 15149 Query: 601 aagat 605 ||||| Sbjct: 15150 aagat 15154 Score = 1146 bits (578), Expect = 0.0 Identities = 600/605 (99%), Gaps = 2/605 (0%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122826 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 122885 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 122886 gggaacggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 122944 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 122945 cttatggacccgaac-taggtgatctatccatgaccaggatgaagcttggatgaaactaa 123003 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123004 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 123063 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123064 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 123123 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123124 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 123183 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123184 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 123243 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123244 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 123303 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123304 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 123363 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123364 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 123423 Query: 601 aagat 605 ||||| Sbjct: 123424 aagat 123428
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1170 bits (590), Expect = 0.0 Identities = 602/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141359 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 141418 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 141419 gggaacggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 141477 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141478 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 141537 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141538 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 141597 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141598 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 141657 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141658 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 141717 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141718 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 141777 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141778 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 141837 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141838 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 141897 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141898 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 141957 Query: 601 aagat 605 ||||| Sbjct: 141958 aagat 141962
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1170 bits (590), Expect = 0.0 Identities = 602/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93955 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 94014 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 94015 gggaacggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 94073 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94074 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 94133 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94134 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 94193 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94194 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 94253 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94254 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 94313 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94314 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 94373 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94374 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 94433 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94434 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 94493 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94494 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 94553 Query: 601 aagat 605 ||||| Sbjct: 94554 aagat 94558
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1170 bits (590), Expect = 0.0 Identities = 602/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Minus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58060 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 58001 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 58000 gggaacggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 57942 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57941 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 57882 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57881 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 57822 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57821 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 57762 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57761 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 57702 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57701 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 57642 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57641 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 57582 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57581 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 57522 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57521 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 57462 Query: 601 aagat 605 ||||| Sbjct: 57461 aagat 57457
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1170 bits (590), Expect = 0.0 Identities = 602/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28019 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 28078 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 28079 gggaacggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 28137 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28138 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 28197 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28198 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 28257 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28258 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 28317 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28318 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 28377 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28378 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 28437 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28438 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 28497 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28498 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 28557 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28558 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 28617 Query: 601 aagat 605 ||||| Sbjct: 28618 aagat 28622
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1170 bits (590), Expect = 0.0 Identities = 602/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268711 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 9268770 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 9268771 gggaacggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 9268829 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268830 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 9268889 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268890 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 9268949 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268950 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 9269009 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269010 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 9269069 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269070 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 9269129 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269130 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 9269189 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269190 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 9269249 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269250 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 9269309 Query: 601 aagat 605 ||||| Sbjct: 9269310 aagat 9269314 Score = 1170 bits (590), Expect = 0.0 Identities = 602/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056625 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 9056684 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 9056685 gggaacggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 9056743 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056744 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 9056803 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056804 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 9056863 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056864 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 9056923 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056924 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 9056983 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056984 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 9057043 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057044 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 9057103 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057104 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 9057163 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057164 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 9057223 Query: 601 aagat 605 ||||| Sbjct: 9057224 aagat 9057228 Score = 1162 bits (586), Expect = 0.0 Identities = 601/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228211 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 9228270 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 9228271 gggaacggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 9228329 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228330 cttatggacccgaacctaggtgatctatccatgaccaggatgaagcttggatgaaactaa 9228389 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228390 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 9228449 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228450 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 9228509 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228510 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 9228569 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228570 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 9228629 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228630 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 9228689 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228690 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 9228749 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228750 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 9228809 Query: 601 aagat 605 ||||| Sbjct: 9228810 aagat 9228814 Score = 1146 bits (578), Expect = 0.0 Identities = 600/605 (99%), Gaps = 2/605 (0%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164800 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 9164859 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 9164860 gggaacggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 9164918 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164919 cttatggacccgaac-taggtgatctatccatgaccaggatgaagcttggatgaaactaa 9164977 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164978 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 9165037 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165038 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 9165097 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165098 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 9165157 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165158 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 9165217 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165218 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 9165277 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165278 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 9165337 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165338 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 9165397 Query: 601 aagat 605 ||||| Sbjct: 9165398 aagat 9165402
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1170 bits (590), Expect = 0.0 Identities = 602/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938696 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 19938755 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 19938756 gggaacggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 19938814 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938815 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 19938874 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938875 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 19938934 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938935 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 19938994 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938995 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 19939054 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939055 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 19939114 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939115 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 19939174 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939175 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 19939234 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939235 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 19939294 Query: 601 aagat 605 ||||| Sbjct: 19939295 aagat 19939299 Score = 1170 bits (590), Expect = 0.0 Identities = 602/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387563 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 10387622 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 10387623 gggaacggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 10387681 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387682 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 10387741 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387742 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 10387801 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387802 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 10387861 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387862 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 10387921 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387922 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 10387981 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387982 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 10388041 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388042 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 10388101 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388102 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 10388161 Query: 601 aagat 605 ||||| Sbjct: 10388162 aagat 10388166 Score = 1170 bits (590), Expect = 0.0 Identities = 602/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Minus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276735 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 10276676 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 10276675 gggaacggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 10276617 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276616 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 10276557 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276556 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 10276497 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276496 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 10276437 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276436 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 10276377 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276376 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 10276317 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276316 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 10276257 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276256 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 10276197 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276196 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 10276137 Query: 601 aagat 605 ||||| Sbjct: 10276136 aagat 10276132 Score = 54.0 bits (27), Expect = 5e-04 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 350 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 409 ||||||||||||| |||| ||| |||||||||| ||| ||||||||||| ||||||| | Sbjct: 781053 gtaccaaatcgagacaaagtctaaatactagatgtga--caaaaataaca-gggtcaatg 781109 Query: 410 tcggccagtgagacgatgggggataagcttcatcgtcgagag 451 || || ||||||| | ||| ||||| || ||||||||||| Sbjct: 781110 tcagctagtgagatggcgggaaataagttttatcgtcgagag 781151 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 581 gatcgagcgcccttgcgctgaagat 605 ||||||||||||||||||||||||| Sbjct: 15833511 gatcgagcgcccttgcgctgaagat 15833487 Score = 48.1 bits (24), Expect = 0.034 Identities = 51/60 (85%) Strand = Plus / Minus Query: 522 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 581 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 2736127 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 2736068
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1170 bits (590), Expect = 0.0 Identities = 602/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598878 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 31598937 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 31598938 gggaacggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 31598996 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598997 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 31599056 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599057 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 31599116 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599117 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 31599176 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599177 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 31599236 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599237 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 31599296 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599297 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 31599356 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599357 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 31599416 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599417 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 31599476 Query: 601 aagat 605 ||||| Sbjct: 31599477 aagat 31599481 Score = 359 bits (181), Expect = 7e-96 Identities = 181/181 (100%) Strand = Plus / Minus Query: 425 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11510080 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11510021 Query: 485 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11510020 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 11509961 Query: 545 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 604 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509960 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 11509901 Query: 605 t 605 | Sbjct: 11509900 t 11509900 Score = 157 bits (79), Expect = 5e-35 Identities = 79/79 (100%) Strand = Plus / Minus Query: 527 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411986 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 27411927 Query: 587 gcgcccttgcgctgaagat 605 ||||||||||||||||||| Sbjct: 27411926 gcgcccttgcgctgaagat 27411908 Score = 133 bits (67), Expect = 7e-28 Identities = 73/75 (97%) Strand = Plus / Minus Query: 441 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 500 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25813487 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25813428 Query: 501 taaaggaggtggggg 515 ||||||||||||||| Sbjct: 25813427 taaaggaggtggggg 25813413 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 444 gtcgagagggaaacagcccggatcaccagctaaggccc 481 |||||||||||||||||||||||||||||||||||||| Sbjct: 28673577 gtcgagagggaaacagcccggatcaccagctaaggccc 28673614 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 343 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 397 |||| ||||||||||||||| |||||| |||||| || |||||||| |||||||| Sbjct: 36035516 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacctaaaaataa 36035570
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 1170 bits (590), Expect = 0.0 Identities = 602/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526194 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 33526253 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 33526254 gggaacggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 33526312 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526313 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 33526372 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526373 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 33526432 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526433 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 33526492 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526493 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 33526552 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526553 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 33526612 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526613 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 33526672 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526673 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 33526732 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526733 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 33526792 Query: 601 aagat 605 ||||| Sbjct: 33526793 aagat 33526797 Score = 278 bits (140), Expect = 2e-71 Identities = 164/172 (95%), Gaps = 5/172 (2%) Strand = Plus / Plus Query: 434 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 493 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 527751 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 527810 Query: 494 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 553 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 527811 tcagtgataaaggaggtgggggtgcaaagac-----ggaggtttgcctaaaagcagccac 527865 Query: 554 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 605 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 527866 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 527917 Score = 149 bits (75), Expect = 1e-32 Identities = 77/78 (98%) Strand = Plus / Minus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16678010 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 16677951 Query: 61 gggaacggaacccaccgg 78 |||||||||||||||||| Sbjct: 16677950 gggaacggaacccaccgg 16677933 Score = 60.0 bits (30), Expect = 9e-06 Identities = 32/33 (96%) Strand = Plus / Minus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccg 33 |||||| |||||||||||||||||||||||||| Sbjct: 32744695 tctctgaccgcgtgcctgttgaagaatgagccg 32744663 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 581 gatcgagcgcccttgcgctgaagat 605 |||||||| |||||||||||||||| Sbjct: 9371952 gatcgagcacccttgcgctgaagat 9371928
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1170 bits (590), Expect = 0.0 Identities = 602/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Minus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47347 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 47288 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 47287 gggaacggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 47229 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47228 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 47169 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47168 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 47109 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47108 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 47049 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47048 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 46989 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46988 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 46929 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46928 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 46869 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46868 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 46809 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46808 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 46749 Query: 601 aagat 605 ||||| Sbjct: 46748 aagat 46744
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 1170 bits (590), Expect = 0.0 Identities = 602/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71391 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 71450 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 71451 gggaacggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 71509 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71510 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 71569 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71570 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 71629 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71630 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 71689 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71690 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 71749 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71750 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 71809 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71810 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 71869 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71870 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 71929 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71930 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 71989 Query: 601 aagat 605 ||||| Sbjct: 71990 aagat 71994
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 1170 bits (590), Expect = 0.0 Identities = 602/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 163 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 222 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 223 gggaacggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 281 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 282 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 341 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 342 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 401 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 402 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 461 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 462 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 521 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 522 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 581 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 582 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 641 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 642 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 701 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 702 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 761 Query: 601 aagat 605 ||||| Sbjct: 762 aagat 766
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 1170 bits (590), Expect = 0.0 Identities = 602/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 358 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 417 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 418 gggaacggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 476 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 477 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 536 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 537 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 596 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 597 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 656 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 657 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 716 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 776 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 777 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 836 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 837 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 896 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 897 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 956 Query: 601 aagat 605 ||||| Sbjct: 957 aagat 961
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 1170 bits (590), Expect = 0.0 Identities = 602/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 229 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 288 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 289 gggaacggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 347 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 348 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 407 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 408 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 467 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 468 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 527 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 528 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 587 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 588 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 647 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 648 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 707 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 708 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 767 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 768 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 827 Query: 601 aagat 605 ||||| Sbjct: 828 aagat 832
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 1170 bits (590), Expect = 0.0 Identities = 602/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 419 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 420 gggaacggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 478 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 479 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 538 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 539 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 598 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 599 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 658 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 659 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 718 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 719 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 778 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 779 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 838 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 839 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 898 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 899 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 958 Query: 601 aagat 605 ||||| Sbjct: 959 aagat 963
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 1170 bits (590), Expect = 0.0 Identities = 602/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 179 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 238 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 239 gggaacggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 297 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 298 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 357 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 358 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 417 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 418 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 477 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 478 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 537 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 538 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 597 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 598 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 657 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 658 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 717 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 718 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 777 Query: 601 aagat 605 ||||| Sbjct: 778 aagat 782
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 1170 bits (590), Expect = 0.0 Identities = 602/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 358 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 417 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 418 gggaacggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 476 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 477 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 536 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 537 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 596 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 597 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 656 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 657 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 716 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 776 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 777 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 836 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 837 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 896 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 897 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 956 Query: 601 aagat 605 ||||| Sbjct: 957 aagat 961
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1170 bits (590), Expect = 0.0 Identities = 602/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949972 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 19950031 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 19950032 gggaacggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 19950090 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950091 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 19950150 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950151 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 19950210 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950211 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 19950270 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950271 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 19950330 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950331 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 19950390 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950391 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 19950450 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950451 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 19950510 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950511 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 19950570 Query: 601 aagat 605 ||||| Sbjct: 19950571 aagat 19950575 Score = 1170 bits (590), Expect = 0.0 Identities = 602/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393602 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 10393661 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 10393662 gggaacggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 10393720 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393721 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 10393780 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393781 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 10393840 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393841 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 10393900 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393901 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 10393960 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393961 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 10394020 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394021 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 10394080 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394081 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 10394140 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394141 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 10394200 Query: 601 aagat 605 ||||| Sbjct: 10394201 aagat 10394205 Score = 1170 bits (590), Expect = 0.0 Identities = 602/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Minus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282774 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 10282715 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 10282714 gggaacggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 10282656 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282655 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 10282596 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282595 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 10282536 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282535 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 10282476 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282475 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 10282416 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282415 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 10282356 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282355 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 10282296 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282295 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 10282236 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282235 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 10282176 Query: 601 aagat 605 ||||| Sbjct: 10282175 aagat 10282171 Score = 54.0 bits (27), Expect = 5e-04 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 350 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 409 ||||||||||||| |||| ||| |||||||||| ||| ||||||||||| ||||||| | Sbjct: 781050 gtaccaaatcgagacaaagtctaaatactagatgtga--caaaaataaca-gggtcaatg 781106 Query: 410 tcggccagtgagacgatgggggataagcttcatcgtcgagag 451 || || ||||||| | ||| ||||| || ||||||||||| Sbjct: 781107 tcagctagtgagatggcgggaaataagttttatcgtcgagag 781148 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 581 gatcgagcgcccttgcgctgaagat 605 ||||||||||||||||||||||||| Sbjct: 15841752 gatcgagcgcccttgcgctgaagat 15841728 Score = 48.1 bits (24), Expect = 0.034 Identities = 51/60 (85%) Strand = Plus / Minus Query: 522 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 581 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 2736078 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 2736019
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1170 bits (590), Expect = 0.0 Identities = 602/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Minus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119315 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 119256 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 119255 gggaacggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 119197 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119196 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 119137 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119136 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 119077 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119076 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 119017 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119016 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 118957 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118956 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 118897 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118896 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 118837 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118836 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 118777 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118776 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 118717 Query: 601 aagat 605 ||||| Sbjct: 118716 aagat 118712 Score = 1170 bits (590), Expect = 0.0 Identities = 602/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95724 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 95783 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 95784 gggaacggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 95842 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95843 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 95902 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95903 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 95962 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95963 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 96022 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96023 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 96082 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96083 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 96142 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96143 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 96202 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96203 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 96262 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96263 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 96322 Query: 601 aagat 605 ||||| Sbjct: 96323 aagat 96327
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1162 bits (586), Expect = 0.0 Identities = 601/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20786 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 20845 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 ||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 20846 gggaatggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 20904 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20905 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 20964 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20965 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 21024 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21025 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 21084 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21085 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 21144 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21145 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 21204 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21205 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 21264 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21265 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 21324 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21325 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 21384 Query: 601 aagat 605 ||||| Sbjct: 21385 aagat 21389 Score = 1124 bits (567), Expect = 0.0 Identities = 598/606 (98%), Gaps = 2/606 (0%) Strand = Plus / Minus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44332 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 44273 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 ||||| ||||||| |||| |||||||| ||||||||||||| |||||||||||||||||| Sbjct: 44272 gggaatggaaccctccgg-agccgtagtgaaagcgagtcttcatagggcgattgtcactg 44214 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44213 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 44154 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg-a 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 44153 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgta 44094 Query: 240 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 299 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 44093 aatgccactcgaacccagagctagttggttctccccgaaatgcgttgaggcgcagcagtt 44034 Query: 300 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44033 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 43974 Query: 360 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43973 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 43914 Query: 420 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43913 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 43854 Query: 480 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43853 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 43794 Query: 540 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 599 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43793 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 43734 Query: 600 gaagat 605 |||||| Sbjct: 43733 gaagat 43728
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 1162 bits (586), Expect = 0.0 Identities = 601/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Minus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 961 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 902 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 ||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 901 gggaatggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 843 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 842 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 783 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 782 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 723 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 722 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 663 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 662 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 603 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 602 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 543 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 542 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 483 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 482 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 423 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 422 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 363 Query: 601 aagat 605 ||||| Sbjct: 362 aagat 358
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1162 bits (586), Expect = 0.0 Identities = 601/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Minus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123171 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 123112 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 ||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 123111 gggaatggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 123053 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123052 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 122993 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122992 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 122933 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122932 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 122873 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122872 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 122813 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122812 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 122753 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122752 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 122693 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122692 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 122633 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122632 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 122573 Query: 601 aagat 605 ||||| Sbjct: 122572 aagat 122568 Score = 1162 bits (586), Expect = 0.0 Identities = 601/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99666 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 99725 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 ||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 99726 gggaatggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 99784 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99785 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 99844 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99845 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 99904 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99905 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 99964 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99965 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 100024 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100025 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 100084 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100085 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 100144 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100145 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 100204 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100205 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 100264 Query: 601 aagat 605 ||||| Sbjct: 100265 aagat 100269
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1162 bits (586), Expect = 0.0 Identities = 601/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Minus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123888 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 123829 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 ||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 123828 gggaatggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 123770 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123769 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 123710 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123709 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 123650 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123649 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 123590 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123589 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 123530 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123529 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 123470 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123469 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 123410 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123409 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 123350 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123349 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 123290 Query: 601 aagat 605 ||||| Sbjct: 123289 aagat 123285 Score = 1162 bits (586), Expect = 0.0 Identities = 601/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100343 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 100402 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 ||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 100403 gggaatggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 100461 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100462 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 100521 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100522 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 100581 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100582 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 100641 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100642 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 100701 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100702 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 100761 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100762 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 100821 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100822 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 100881 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100882 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 100941 Query: 601 aagat 605 ||||| Sbjct: 100942 aagat 100946
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1154 bits (582), Expect = 0.0 Identities = 600/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Minus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 9241570 tctctgaccgcgtgcctgttgaagaatgagctggcgactcataggcagtggcttggttaa 9241511 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 9241510 gggaacggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 9241452 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241451 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 9241392 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241391 gcagaggtccgaaccgtctgatgttgaagaatcagcggatgagttgtggttaggggtgaa 9241332 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241331 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 9241272 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241271 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 9241212 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241211 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 9241152 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241151 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 9241092 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241091 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 9241032 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241031 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 9240972 Query: 601 aagat 605 ||||| Sbjct: 9240971 aagat 9240967 Score = 188 bits (95), Expect = 1e-44 Identities = 151/167 (90%), Gaps = 2/167 (1%) Strand = Plus / Minus Query: 315 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 374 |||||||||| |||| |||||||| ||| ||||||| ||||||||||| ||||||||||| Sbjct: 3580549 ggtaaagcaccgtttaggtgcgggttgcacgagcggcaccaaatcgagacaaactctgaa 3580490 Query: 375 tactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggata 434 ||||||||||||||||||| |||||||||||| | |||| ||||||||||||||||||| Sbjct: 3580489 tactagatatgacccaaaagtaacaggggtcatgatcgg-tagtgagacgatgggggata 3580431 Query: 435 agcttcatcgtcgagagggaaac-agcccggatcaccagctaaggcc 480 ||||||||||||||||| ||||| | ||| |||||||||||||||| Sbjct: 3580430 agcttcatcgtcgagagagaaacaaccccaaatcaccagctaaggcc 3580384 Score = 109 bits (55), Expect = 1e-20 Identities = 90/102 (88%), Gaps = 6/102 (5%) Strand = Plus / Minus Query: 469 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtggggg------tgcaaag 522 ||||||||| || ||||||||||||| ||| ||||| |||||||||| ||||||| Sbjct: 3580385 ccagctaagaccactaaatgaccgcttagttataaatgaggtgggggggggggtgcaaag 3580326 Query: 523 acagccaggaggtttgcctagaagcagccaccctttaaagag 564 ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 3580325 acaaccaggaggtttgcctagaagcagccaccctttaaagag 3580284 Score = 40.1 bits (20), Expect = 8.2 Identities = 35/40 (87%) Strand = Plus / Minus Query: 468 accagctaaggcccctaaatgaccgctcagtgataaagga 507 ||||| |||||| ||||||||||||||| |||| ||||| Sbjct: 3319509 accagataaggcttctaaatgaccgctcaatgatgaagga 3319470
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1154 bits (582), Expect = 0.0 Identities = 600/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Minus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 52783 tctctgaccgcgtgcctgttgaagaatgagctggcgactcataggcagtggcttggttaa 52724 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 52723 gggaacggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 52665 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52664 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 52605 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52604 gcagaggtccgaaccgtctgatgttgaagaatcagcggatgagttgtggttaggggtgaa 52545 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52544 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 52485 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52484 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 52425 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52424 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 52365 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52364 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 52305 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52304 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 52245 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52244 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 52185 Query: 601 aagat 605 ||||| Sbjct: 52184 aagat 52180
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 1154 bits (582), Expect = 0.0 Identities = 600/605 (99%), Gaps = 1/605 (0%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 357 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 416 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 417 gggaacggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 475 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 476 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaaccaa 535 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 536 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 595 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 596 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 655 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 656 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 715 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 716 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 775 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 776 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 835 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 836 cctaaatgaccgctcagtgatagaggaggtgggggtgcaaagacagccaggaggtttgcc 895 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 896 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 955 Query: 601 aagat 605 ||||| Sbjct: 956 aagat 960
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 1142 bits (576), Expect = 0.0 Identities = 588/591 (99%), Gaps = 1/591 (0%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 419 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 420 gggaacggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 478 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 479 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 538 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 539 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 598 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 599 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 658 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 659 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 718 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 719 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 778 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 779 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 838 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 839 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 898 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 591 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 899 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 949
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 1134 bits (572), Expect = 0.0 Identities = 582/584 (99%), Gaps = 1/584 (0%) Strand = Plus / Plus Query: 22 aagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggnag 81 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 2 aagaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg-ag 60 Query: 82 ccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggt 141 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggt 120 Query: 142 gatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactga 201 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactga 180 Query: 202 tgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagct 261 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagct 240 Query: 262 agctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaag 321 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 agctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaag 300 Query: 322 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 381 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 360 Query: 382 tatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttca 441 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 tatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttca 420 Query: 442 tcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgat 501 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 tcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgat 480 Query: 502 aaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaa 561 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 aaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaa 540 Query: 562 gagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 605 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 541 gagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 584
>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full insert sequence Length = 819 Score = 1132 bits (571), Expect = 0.0 Identities = 581/583 (99%), Gaps = 1/583 (0%) Strand = Plus / Plus Query: 23 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccggnagc 82 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1 agaatgagccggcgactcataggcagtggcttggttaagggaacggaacccaccgg-agc 59 Query: 83 cgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtg 142 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 60 cgtagcgaaagcgagtcttcatagggcgattgtcactgcttatggacccgaacctgggtg 119 Query: 143 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 202 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 179 Query: 203 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 262 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 180 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 239 Query: 263 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 322 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 240 gctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagc 299 Query: 323 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 382 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 359 Query: 383 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 442 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 atgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcat 419 Query: 443 cgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgata 502 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 420 cgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgata 479 Query: 503 aaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaag 562 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 480 aaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaag 539 Query: 563 agtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 605 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 540 agtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 582
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 1098 bits (554), Expect = 0.0 Identities = 595/605 (98%), Gaps = 3/605 (0%) Strand = Plus / Minus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123111 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 123052 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 ||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 123051 gggaatggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 122993 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122992 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 122933 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122932 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 122873 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122872 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 122813 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 122812 actggacatctaggggtaaagcactgtttcggtgc-ggctgcgcgagcggtaccaaatcg 122754 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122753 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 122694 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122693 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 122634 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 122633 ccttaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccatgaggtttgcc 122574 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 122573 tagaagcagccaccctttaaagagtgcgtaatagctcactga-ctggcgcccttgcgctg 122515 Query: 601 aagat 605 ||||| Sbjct: 122514 aagat 122510 Score = 1098 bits (554), Expect = 0.0 Identities = 595/605 (98%), Gaps = 3/605 (0%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99626 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 99685 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 ||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 99686 gggaatggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 99744 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99745 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 99804 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99805 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 99864 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99865 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 99924 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 99925 actggacatctaggggtaaagcactgtttcggtgc-ggctgcgcgagcggtaccaaatcg 99983 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99984 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 100043 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100044 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 100103 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 100104 ccttaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccatgaggtttgcc 100163 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 100164 tagaagcagccaccctttaaagagtgcgtaatagctcactga-ctggcgcccttgcgctg 100222 Query: 601 aagat 605 ||||| Sbjct: 100223 aagat 100227
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 1098 bits (554), Expect = 0.0 Identities = 595/605 (98%), Gaps = 3/605 (0%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5979 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 6038 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 ||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 6039 gggaatggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 6097 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6098 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 6157 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6158 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 6217 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6218 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 6277 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 6278 actggacatctaggggtaaagcactgtttcggtgc-ggctgcgcgagcggtaccaaatcg 6336 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6337 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 6396 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6397 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 6456 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 6457 ccttaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccatgaggtttgcc 6516 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 6517 tagaagcagccaccctttaaagagtgcgtaatagctcactga-ctggcgcccttgcgctg 6575 Query: 601 aagat 605 ||||| Sbjct: 6576 aagat 6580
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 1098 bits (554), Expect = 0.0 Identities = 595/605 (98%), Gaps = 3/605 (0%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 567 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 626 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 ||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 627 gggaatggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 685 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 686 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 745 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 746 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 805 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 806 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 865 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 866 actggacatctaggggtaaagcactgtttcggtgc-ggctgcgcgagcggtaccaaatcg 924 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 925 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 984 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 985 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 1044 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 ||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1045 ccttaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccatgaggtttgcc 1104 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 1105 tagaagcagccaccctttaaagagtgcgtaatagctcactga-ctggcgcccttgcgctg 1163 Query: 601 aagat 605 ||||| Sbjct: 1164 aagat 1168
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 1072 bits (541), Expect = 0.0 Identities = 592/607 (97%), Gaps = 3/607 (0%) Strand = Plus / Minus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtg--gcttggtt 58 |||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 122653 tctctgaccgcgtgcctgttgaagaatgagccggtgactcataggcagtgtggcttggtt 122594 Query: 59 aagggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcac 118 |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| Sbjct: 122593 aagggaacggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcac 122535 Query: 119 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122534 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 122475 Query: 179 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 238 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122474 aagcagaggttcgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 122415 Query: 239 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122414 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 122355 Query: 299 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122354 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 122295 Query: 359 cgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagt 418 |||||||||||||||||||||||||||||||||||||| ||| |||| |||||||||| Sbjct: 122294 tgaggcaaactctgaatactagatatgacccaaaaataataggattcaaagtcggccagt 122235 Query: 419 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 478 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 122234 gagacgatgggggataagcttcatcgtcgagagggaaacagcctggatcaccagctaagg 122175 Query: 479 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 538 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 122174 cccctaaatgaccgctcaatgataaaggaggtgggggtgcaaagacagccaggaggtttg 122115 Query: 539 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 598 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 122114 cctagaagcagccaccctttaaagagtgcgtaatagctcactaatcgagcgcccttgcgc 122055 Query: 599 tgaagat 605 ||||||| Sbjct: 122054 tgaagat 122048
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 1072 bits (541), Expect = 0.0 Identities = 592/607 (97%), Gaps = 3/607 (0%) Strand = Plus / Minus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtg--gcttggtt 58 |||||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 12825194 tctctgaccgcgtgcctgttgaagaatgagccggtgactcataggcagtgtggcttggtt 12825135 Query: 59 aagggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcac 118 |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| Sbjct: 12825134 aagggaacggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcac 12825076 Query: 119 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 178 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825075 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 12825016 Query: 179 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 238 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825015 aagcagaggttcgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 12824956 Query: 239 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824955 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 12824896 Query: 299 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824895 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 12824836 Query: 359 cgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagt 418 |||||||||||||||||||||||||||||||||||||| ||| |||| |||||||||| Sbjct: 12824835 tgaggcaaactctgaatactagatatgacccaaaaataataggattcaaagtcggccagt 12824776 Query: 419 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 478 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 12824775 gagacgatgggggataagcttcatcgtcgagagggaaacagcctggatcaccagctaagg 12824716 Query: 479 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 538 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824715 cccctaaatgaccgctcaatgataaaggaggtgggggtgcaaagacagccaggaggtttg 12824656 Query: 539 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 598 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 12824655 cctagaagcagccaccctttaaagagtgcgtaatagctcactaatcgagcgcccttgcgc 12824596 Query: 599 tgaagat 605 ||||||| Sbjct: 12824595 tgaagat 12824589
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 1027 bits (518), Expect = 0.0 Identities = 584/605 (96%), Gaps = 6/605 (0%) Strand = Plus / Minus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141547 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 141488 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||| ||||||| |||||||||||||||||||||| ||||||| |||||||||| Sbjct: 141487 gggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactg 141434 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 141433 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 141374 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141373 gtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 141314 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141313 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 141254 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 141253 actggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcg 141194 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct: 141193 aggcaaactctgaatactagatatgaccccaaaataacaggggtaaaggtcggccagtga 141134 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141133 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 141074 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 141073 cctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcc 141014 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| | Sbjct: 141013 tagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccg 140954 Query: 601 aagat 605 ||||| Sbjct: 140953 aagat 140949 Score = 1027 bits (518), Expect = 0.0 Identities = 584/605 (96%), Gaps = 6/605 (0%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112110 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 112169 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||| ||||||| |||||||||||||||||||||| ||||||| |||||||||| Sbjct: 112170 gggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactg 112223 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 112224 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 112283 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112284 gtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 112343 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112344 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 112403 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 112404 actggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcg 112463 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct: 112464 aggcaaactctgaatactagatatgaccccaaaataacaggggtaaaggtcggccagtga 112523 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112524 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 112583 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 112584 cctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcc 112643 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| | Sbjct: 112644 tagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccg 112703 Query: 601 aagat 605 ||||| Sbjct: 112704 aagat 112708
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 1025 bits (517), Expect = 0.0 Identities = 583/604 (96%), Gaps = 6/604 (0%) Strand = Plus / Minus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131106 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 131047 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 131046 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 130993 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 130992 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 130933 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130932 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 130873 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130872 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 130813 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 130812 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 130753 Query: 362 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 421 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 130752 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgag 130693 Query: 422 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130692 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 130633 Query: 482 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 541 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 130632 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 130573 Query: 542 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 601 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 130572 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 130513 Query: 602 agat 605 |||| Sbjct: 130512 agat 130509 Score = 1025 bits (517), Expect = 0.0 Identities = 583/604 (96%), Gaps = 6/604 (0%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103529 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 103588 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 103589 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 103642 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 103643 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 103702 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103703 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 103762 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103763 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 103822 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 103823 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 103882 Query: 362 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 421 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 103883 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgag 103942 Query: 422 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103943 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 104002 Query: 482 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 541 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 104003 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 104062 Query: 542 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 601 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 104063 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 104122 Query: 602 agat 605 |||| Sbjct: 104123 agat 104126
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 1025 bits (517), Expect = 0.0 Identities = 583/604 (96%), Gaps = 6/604 (0%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 562 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 621 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 622 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 675 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 676 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 735 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 736 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 795 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 796 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 855 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 856 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 915 Query: 362 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 421 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 916 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgag 975 Query: 422 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 976 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 1035 Query: 482 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 541 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 1036 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 1095 Query: 542 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 601 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 1096 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 1155 Query: 602 agat 605 |||| Sbjct: 1156 agat 1159
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 1017 bits (513), Expect = 0.0 Identities = 582/604 (96%), Gaps = 6/604 (0%) Strand = Plus / Minus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138943 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 138884 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 138883 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 138830 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 138829 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 138770 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138769 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 138710 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138709 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 138650 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 138649 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 138590 Query: 362 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 421 ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| Sbjct: 138589 ggcaaactctgaatactagatatgacctcaaaataacaggggtcgaggtcggccagtgag 138530 Query: 422 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138529 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 138470 Query: 482 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 541 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 138469 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 138410 Query: 542 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 601 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 138409 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 138350 Query: 602 agat 605 |||| Sbjct: 138349 agat 138346 Score = 1017 bits (513), Expect = 0.0 Identities = 582/604 (96%), Gaps = 6/604 (0%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110154 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 110213 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 110214 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 110267 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 110268 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 110327 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110328 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 110387 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110388 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 110447 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 110448 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 110507 Query: 362 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 421 ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| Sbjct: 110508 ggcaaactctgaatactagatatgacctcaaaataacaggggtcgaggtcggccagtgag 110567 Query: 422 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110568 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 110627 Query: 482 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 541 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 110628 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 110687 Query: 542 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 601 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 110688 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 110747 Query: 602 agat 605 |||| Sbjct: 110748 agat 110751
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 1017 bits (513), Expect = 0.0 Identities = 582/604 (96%), Gaps = 6/604 (0%) Strand = Plus / Minus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132214 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 132155 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 132154 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 132101 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 132100 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 132041 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132040 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 131981 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131980 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 131921 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 131920 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 131861 Query: 362 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 421 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 131860 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgag 131801 Query: 422 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131800 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 131741 Query: 482 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 541 |||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 131740 ctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 131681 Query: 542 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 601 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 131680 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 131621 Query: 602 agat 605 |||| Sbjct: 131620 agat 131617 Score = 1017 bits (513), Expect = 0.0 Identities = 582/604 (96%), Gaps = 6/604 (0%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104664 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 104723 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 104724 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 104777 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 104778 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 104837 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104838 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 104897 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104898 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 104957 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 104958 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 105017 Query: 362 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 421 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 105018 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgag 105077 Query: 422 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105078 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 105137 Query: 482 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 541 |||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 105138 ctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 105197 Query: 542 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 601 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 105198 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 105257 Query: 602 agat 605 |||| Sbjct: 105258 agat 105261
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 1017 bits (513), Expect = 0.0 Identities = 582/604 (96%), Gaps = 6/604 (0%) Strand = Plus / Minus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136377 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 136318 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 136317 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 136264 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 136263 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 136204 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136203 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 136144 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136143 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 136084 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 136083 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 136024 Query: 362 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 421 ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 136023 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgag 135964 Query: 422 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135963 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 135904 Query: 482 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 541 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 135903 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 135844 Query: 542 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 601 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 135843 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 135784 Query: 602 agat 605 |||| Sbjct: 135783 agat 135780 Score = 1017 bits (513), Expect = 0.0 Identities = 582/604 (96%), Gaps = 6/604 (0%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107180 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 107239 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 107240 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 107293 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 107294 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 107353 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107354 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 107413 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107414 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 107473 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 107474 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 107533 Query: 362 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 421 ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 107534 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgag 107593 Query: 422 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107594 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 107653 Query: 482 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 541 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 107654 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 107713 Query: 542 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 601 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 107714 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 107773 Query: 602 agat 605 |||| Sbjct: 107774 agat 107777
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 1017 bits (513), Expect = 0.0 Identities = 582/604 (96%), Gaps = 6/604 (0%) Strand = Plus / Minus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142318 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 142259 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 142258 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 142205 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142204 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 142145 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142144 cggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 142085 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 142084 tgccactcgaacccagagctagctcgttctccccgaaatgcgttgaggcgcagcagttga 142025 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 142024 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 141965 Query: 362 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 421 ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 141964 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgag 141905 Query: 422 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 481 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 141904 acgatgggggataagcttgatcgtcgagagggaaacagcccggatcaccagctaaggccc 141845 Query: 482 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 541 |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 141844 ctaaatgatcgctcagtgataaaggaggtaggggtgcaaagacagccaggaggtttgcct 141785 Query: 542 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 601 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 141784 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 141725 Query: 602 agat 605 |||| Sbjct: 141724 agat 141721 Score = 1017 bits (513), Expect = 0.0 Identities = 582/604 (96%), Gaps = 6/604 (0%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111010 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 111069 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 111070 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 111123 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111124 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 111183 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111184 cggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 111243 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 111244 tgccactcgaacccagagctagctcgttctccccgaaatgcgttgaggcgcagcagttga 111303 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 111304 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 111363 Query: 362 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 421 ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 111364 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgag 111423 Query: 422 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 481 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 111424 acgatgggggataagcttgatcgtcgagagggaaacagcccggatcaccagctaaggccc 111483 Query: 482 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 541 |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 111484 ctaaatgatcgctcagtgataaaggaggtaggggtgcaaagacagccaggaggtttgcct 111543 Query: 542 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 601 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 111544 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 111603 Query: 602 agat 605 |||| Sbjct: 111604 agat 111607
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 1017 bits (513), Expect = 0.0 Identities = 582/604 (96%), Gaps = 6/604 (0%) Strand = Plus / Minus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134985 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 134926 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 134925 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 134872 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 134871 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 134812 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134811 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 134752 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134751 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 134692 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 134691 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 134632 Query: 362 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 421 ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 134631 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgag 134572 Query: 422 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134571 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 134512 Query: 482 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 541 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 134511 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 134452 Query: 542 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 601 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 134451 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 134392 Query: 602 agat 605 |||| Sbjct: 134391 agat 134388 Score = 1017 bits (513), Expect = 0.0 Identities = 582/604 (96%), Gaps = 6/604 (0%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106051 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106110 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 106111 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 106164 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106165 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 106224 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106225 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 106284 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106285 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 106344 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 106345 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 106404 Query: 362 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 421 ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 106405 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgag 106464 Query: 422 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106465 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 106524 Query: 482 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 541 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 106525 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 106584 Query: 542 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 601 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 106585 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 106644 Query: 602 agat 605 |||| Sbjct: 106645 agat 106648
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 1017 bits (513), Expect = 0.0 Identities = 582/604 (96%), Gaps = 6/604 (0%) Strand = Plus / Minus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136031 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135972 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 135971 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 135918 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135917 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 135858 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135857 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 135798 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135797 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 135738 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 135737 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 135678 Query: 362 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 421 ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 135677 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgag 135618 Query: 422 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135617 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 135558 Query: 482 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 541 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 135557 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 135498 Query: 542 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 601 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 135497 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 135438 Query: 602 agat 605 |||| Sbjct: 135437 agat 135434 Score = 1017 bits (513), Expect = 0.0 Identities = 582/604 (96%), Gaps = 6/604 (0%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106394 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106453 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 106454 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 106507 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106508 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 106567 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106568 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 106627 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106628 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 106687 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 106688 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 106747 Query: 362 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 421 ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 106748 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgag 106807 Query: 422 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106808 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 106867 Query: 482 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 541 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 106868 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 106927 Query: 542 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 601 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 106928 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 106987 Query: 602 agat 605 |||| Sbjct: 106988 agat 106991
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 1017 bits (513), Expect = 0.0 Identities = 582/604 (96%), Gaps = 6/604 (0%) Strand = Plus / Minus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135120 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135061 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 135060 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 135007 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135006 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 134947 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134946 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 134887 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134886 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 134827 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 134826 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 134767 Query: 362 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 421 ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 134766 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgag 134707 Query: 422 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134706 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 134647 Query: 482 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 541 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 134646 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 134587 Query: 542 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 601 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 134586 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 134527 Query: 602 agat 605 |||| Sbjct: 134526 agat 134523 Score = 1017 bits (513), Expect = 0.0 Identities = 582/604 (96%), Gaps = 6/604 (0%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106223 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106282 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 106283 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 106336 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106337 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 106396 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106397 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 106456 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106457 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 106516 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 106517 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 106576 Query: 362 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 421 ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 106577 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgag 106636 Query: 422 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106637 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 106696 Query: 482 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 541 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 106697 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 106756 Query: 542 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 601 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 106757 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 106816 Query: 602 agat 605 |||| Sbjct: 106817 agat 106820
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 1017 bits (513), Expect = 0.0 Identities = 582/604 (96%), Gaps = 6/604 (0%) Strand = Plus / Minus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135118 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135059 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 135058 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 135005 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135004 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 134945 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134944 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 134885 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134884 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 134825 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 134824 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 134765 Query: 362 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 421 ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 134764 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgag 134705 Query: 422 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134704 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 134645 Query: 482 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 541 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 134644 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 134585 Query: 542 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 601 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 134584 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 134525 Query: 602 agat 605 |||| Sbjct: 134524 agat 134521 Score = 1017 bits (513), Expect = 0.0 Identities = 582/604 (96%), Gaps = 6/604 (0%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106220 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106279 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 106280 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 106333 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106334 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 106393 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106394 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 106453 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106454 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 106513 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 106514 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 106573 Query: 362 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 421 ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 106574 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgag 106633 Query: 422 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106634 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 106693 Query: 482 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 541 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 106694 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 106753 Query: 542 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 601 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 106754 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 106813 Query: 602 agat 605 |||| Sbjct: 106814 agat 106817
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 1017 bits (513), Expect = 0.0 Identities = 582/604 (96%), Gaps = 6/604 (0%) Strand = Plus / Minus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135030 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 134971 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 134970 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 134917 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 134916 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 134857 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134856 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 134797 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134796 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 134737 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 134736 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 134677 Query: 362 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 421 ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 134676 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgag 134617 Query: 422 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134616 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 134557 Query: 482 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 541 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 134556 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 134497 Query: 542 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 601 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 134496 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 134437 Query: 602 agat 605 |||| Sbjct: 134436 agat 134433 Score = 1017 bits (513), Expect = 0.0 Identities = 582/604 (96%), Gaps = 6/604 (0%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106098 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106157 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 106158 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 106211 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106212 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 106271 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106272 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 106331 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106332 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 106391 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 106392 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 106451 Query: 362 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 421 ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 106452 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgag 106511 Query: 422 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106512 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 106571 Query: 482 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 541 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 106572 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 106631 Query: 542 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 601 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 106632 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 106691 Query: 602 agat 605 |||| Sbjct: 106692 agat 106695
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 1017 bits (513), Expect = 0.0 Identities = 582/604 (96%), Gaps = 6/604 (0%) Strand = Plus / Minus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132207 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 132148 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 132147 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 132094 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 132093 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 132034 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132033 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 131974 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131973 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 131914 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 131913 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 131854 Query: 362 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 421 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 131853 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgag 131794 Query: 422 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131793 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 131734 Query: 482 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 541 |||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 131733 ctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 131674 Query: 542 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 601 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 131673 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 131614 Query: 602 agat 605 |||| Sbjct: 131613 agat 131610 Score = 1017 bits (513), Expect = 0.0 Identities = 582/604 (96%), Gaps = 6/604 (0%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104662 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 104721 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 104722 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 104775 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 104776 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 104835 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104836 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 104895 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104896 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 104955 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 104956 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 105015 Query: 362 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 421 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 105016 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtgag 105075 Query: 422 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105076 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 105135 Query: 482 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 541 |||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 105136 ctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 105195 Query: 542 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 601 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 105196 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 105255 Query: 602 agat 605 |||| Sbjct: 105256 agat 105259
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 1013 bits (511), Expect = 0.0 Identities = 580/602 (96%), Gaps = 6/602 (0%) Strand = Plus / Minus Query: 4 ctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 63 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131228 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 131169 Query: 64 aacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgctt 123 ||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 131168 aac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgctt 131115 Query: 124 atggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagca 183 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 131114 atggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtg 131055 Query: 184 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131054 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 130995 Query: 244 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130994 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 130935 Query: 304 ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 363 |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| Sbjct: 130934 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 130875 Query: 364 caaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagac 423 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 130874 caaactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgagac 130815 Query: 424 gatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccct 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130814 gatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccct 130755 Query: 484 aaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctag 543 ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 130754 aaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctag 130695 Query: 544 aagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaag 603 |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 130694 aagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaag 130635 Query: 604 at 605 || Sbjct: 130634 at 130633 Score = 1013 bits (511), Expect = 0.0 Identities = 580/602 (96%), Gaps = 6/602 (0%) Strand = Plus / Plus Query: 4 ctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 63 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102217 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 102276 Query: 64 aacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgctt 123 ||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 102277 aac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgctt 102330 Query: 124 atggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagca 183 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 102331 atggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtg 102390 Query: 184 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102391 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 102450 Query: 244 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 303 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102451 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 102510 Query: 304 ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 363 |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| Sbjct: 102511 ggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgagg 102570 Query: 364 caaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagac 423 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 102571 caaactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgagac 102630 Query: 424 gatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccct 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102631 gatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccct 102690 Query: 484 aaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctag 543 ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 102691 aaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctag 102750 Query: 544 aagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaag 603 |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 102751 aagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaag 102810 Query: 604 at 605 || Sbjct: 102811 at 102812
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 1011 bits (510), Expect = 0.0 Identities = 583/605 (96%), Gaps = 7/605 (1%) Strand = Plus / Minus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133662 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 133603 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||| ||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 133602 gggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 133549 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 133548 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 133489 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133488 gtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 133429 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133428 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 133369 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 ||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 133368 actagacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcg 133309 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 133308 aggcaaactctgaatactagatatgacccaaaaatcaca-gggtcaaggtcggccagtga 133250 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133249 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 133190 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 133189 cctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcc 133130 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 ||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||||| | Sbjct: 133129 tagaagccgccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccg 133070 Query: 601 aagat 605 ||||| Sbjct: 133069 aagat 133065 Score = 1011 bits (510), Expect = 0.0 Identities = 583/605 (96%), Gaps = 7/605 (1%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104309 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 104368 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||| ||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 104369 gggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 104422 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 104423 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 104482 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104483 gtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 104542 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104543 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 104602 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 ||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 104603 actagacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcg 104662 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 104663 aggcaaactctgaatactagatatgacccaaaaatcaca-gggtcaaggtcggccagtga 104721 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104722 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 104781 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 104782 cctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcc 104841 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 ||||||| ||||||||| |||||||||||||||||||||||||||||||| ||||||| | Sbjct: 104842 tagaagccgccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccg 104901 Query: 601 aagat 605 ||||| Sbjct: 104902 aagat 104906
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 1009 bits (509), Expect = 0.0 Identities = 581/604 (96%), Gaps = 6/604 (0%) Strand = Plus / Minus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135739 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135680 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 135679 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 135626 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135625 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 135566 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135565 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 135506 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135505 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 135446 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 135445 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 135386 Query: 362 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 421 ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 135385 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgag 135326 Query: 422 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135325 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 135266 Query: 482 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 541 |||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 135265 ctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 135206 Query: 542 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 601 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 135205 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 135146 Query: 602 agat 605 |||| Sbjct: 135145 agat 135142 Score = 1009 bits (509), Expect = 0.0 Identities = 581/604 (96%), Gaps = 6/604 (0%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106891 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106950 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 106951 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 107004 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 107005 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 107064 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107065 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 107124 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107125 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 107184 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 107185 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 107244 Query: 362 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 421 ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 107245 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgag 107304 Query: 422 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107305 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 107364 Query: 482 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 541 |||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 107365 ctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 107424 Query: 542 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 601 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 107425 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 107484 Query: 602 agat 605 |||| Sbjct: 107485 agat 107488
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 1009 bits (509), Expect = 0.0 Identities = 581/604 (96%), Gaps = 6/604 (0%) Strand = Plus / Minus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135340 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135281 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 ||||| ||||||| |||||||||||||||||||||| || |||| ||||||||||| Sbjct: 135280 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatggggcaattgtcactgc 135227 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135226 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 135167 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135166 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 135107 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135106 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 135047 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 135046 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 134987 Query: 362 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 421 ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 134986 ggcaaactctgaatactagatatgatctcaaaataacaggggtcaaggtcggccagtgag 134927 Query: 422 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134926 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 134867 Query: 482 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 541 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 134866 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 134807 Query: 542 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 601 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 134806 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 134747 Query: 602 agat 605 |||| Sbjct: 134746 agat 134743 Score = 1009 bits (509), Expect = 0.0 Identities = 581/604 (96%), Gaps = 6/604 (0%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106566 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106625 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 ||||| ||||||| |||||||||||||||||||||| || |||| ||||||||||| Sbjct: 106626 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatggggcaattgtcactgc 106679 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106680 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 106739 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106740 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 106799 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106800 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 106859 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 106860 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 106919 Query: 362 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 421 ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 106920 ggcaaactctgaatactagatatgatctcaaaataacaggggtcaaggtcggccagtgag 106979 Query: 422 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106980 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 107039 Query: 482 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 541 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 107040 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 107099 Query: 542 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 601 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 107100 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 107159 Query: 602 agat 605 |||| Sbjct: 107160 agat 107163
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 1009 bits (509), Expect = 0.0 Identities = 581/604 (96%), Gaps = 6/604 (0%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2085 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 2144 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 2145 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 2198 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 2199 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 2258 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2259 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 2318 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2319 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 2378 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 2379 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 2438 Query: 362 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 421 ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 2439 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgag 2498 Query: 422 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2499 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 2558 Query: 482 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 541 |||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 2559 ctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 2618 Query: 542 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 601 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 2619 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 2678 Query: 602 agat 605 |||| Sbjct: 2679 agat 2682
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 1009 bits (509), Expect = 0.0 Identities = 581/604 (96%), Gaps = 6/604 (0%) Strand = Plus / Minus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135619 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135560 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 ||||| ||||||| |||||||||||||||||||||| || |||| ||||||||||| Sbjct: 135559 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatggggcaattgtcactgc 135506 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135505 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 135446 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135445 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 135386 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135385 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 135326 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 135325 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 135266 Query: 362 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 421 ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 135265 ggcaaactctgaatactagatatgatctcaaaataacaggggtcaaggtcggccagtgag 135206 Query: 422 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135205 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 135146 Query: 482 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 541 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 135145 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 135086 Query: 542 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 601 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 135085 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 135026 Query: 602 agat 605 |||| Sbjct: 135025 agat 135022 Score = 1009 bits (509), Expect = 0.0 Identities = 581/604 (96%), Gaps = 6/604 (0%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106788 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106847 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 ||||| ||||||| |||||||||||||||||||||| || |||| ||||||||||| Sbjct: 106848 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatggggcaattgtcactgc 106901 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106902 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 106961 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106962 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 107021 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107022 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 107081 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 107082 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 107141 Query: 362 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 421 ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 107142 ggcaaactctgaatactagatatgatctcaaaataacaggggtcaaggtcggccagtgag 107201 Query: 422 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107202 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 107261 Query: 482 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 541 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 107262 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 107321 Query: 542 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 601 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 107322 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 107381 Query: 602 agat 605 |||| Sbjct: 107382 agat 107385
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 1009 bits (509), Expect = 0.0 Identities = 581/604 (96%), Gaps = 6/604 (0%) Strand = Plus / Minus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135737 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135678 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 135677 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 135624 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135623 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 135564 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135563 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 135504 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135503 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 135444 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 135443 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 135384 Query: 362 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 421 ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 135383 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgag 135324 Query: 422 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135323 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 135264 Query: 482 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 541 |||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 135263 ctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 135204 Query: 542 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 601 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 135203 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 135144 Query: 602 agat 605 |||| Sbjct: 135143 agat 135140 Score = 1009 bits (509), Expect = 0.0 Identities = 581/604 (96%), Gaps = 6/604 (0%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106889 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106948 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 106949 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 107002 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 107003 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 107062 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107063 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 107122 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107123 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 107182 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 107183 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 107242 Query: 362 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 421 ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 107243 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgag 107302 Query: 422 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107303 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 107362 Query: 482 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 541 |||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 107363 ctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 107422 Query: 542 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 601 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 107423 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 107482 Query: 602 agat 605 |||| Sbjct: 107483 agat 107486
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 1009 bits (509), Expect = 0.0 Identities = 581/604 (96%), Gaps = 6/604 (0%) Strand = Plus / Minus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135468 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 135409 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 135408 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 135355 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 135354 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 135295 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135294 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 135235 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135234 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 135175 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 135174 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 135115 Query: 362 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 421 ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 135114 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgag 135055 Query: 422 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135054 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 134995 Query: 482 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 541 |||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 134994 ctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 134935 Query: 542 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 601 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 134934 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 134875 Query: 602 agat 605 |||| Sbjct: 134874 agat 134871 Score = 1009 bits (509), Expect = 0.0 Identities = 581/604 (96%), Gaps = 6/604 (0%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106670 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 106729 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 106730 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 106783 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106784 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 106843 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106844 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 106903 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106904 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 106963 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 106964 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 107023 Query: 362 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 421 ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 107024 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgag 107083 Query: 422 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107084 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 107143 Query: 482 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 541 |||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 107144 ctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 107203 Query: 542 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 601 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 107204 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 107263 Query: 602 agat 605 |||| Sbjct: 107264 agat 107267
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 1009 bits (509), Expect = 0.0 Identities = 581/604 (96%), Gaps = 6/604 (0%) Strand = Plus / Minus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139148 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139089 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 139088 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 139035 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 139034 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 138975 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138974 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 138915 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138914 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 138855 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 138854 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 138795 Query: 362 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 421 ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| Sbjct: 138794 ggcaaactctgaatactagatatgacctccaaataataggggtcaaggtcggccagtgag 138735 Query: 422 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138734 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 138675 Query: 482 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 541 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 138674 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 138615 Query: 542 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 601 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 138614 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 138555 Query: 602 agat 605 |||| Sbjct: 138554 agat 138551 Score = 1009 bits (509), Expect = 0.0 Identities = 581/604 (96%), Gaps = 6/604 (0%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110151 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 110210 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 110211 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 110264 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 110265 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 110324 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110325 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 110384 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110385 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 110444 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 110445 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 110504 Query: 362 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 421 ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| Sbjct: 110505 ggcaaactctgaatactagatatgacctccaaataataggggtcaaggtcggccagtgag 110564 Query: 422 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110565 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 110624 Query: 482 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 541 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 110625 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 110684 Query: 542 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 601 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 110685 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 110744 Query: 602 agat 605 |||| Sbjct: 110745 agat 110748
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 1009 bits (509), Expect = 0.0 Identities = 581/604 (96%), Gaps = 6/604 (0%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 658 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 717 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 718 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 771 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 772 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 831 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 832 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 891 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 892 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 951 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 952 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 1011 Query: 362 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 421 ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 1012 ggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgag 1071 Query: 422 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1072 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 1131 Query: 482 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 541 |||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 1132 ctaaatgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 1191 Query: 542 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 601 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 1192 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 1251 Query: 602 agat 605 |||| Sbjct: 1252 agat 1255
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 1001 bits (505), Expect = 0.0 Identities = 580/604 (96%), Gaps = 6/604 (0%) Strand = Plus / Minus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 134997 ctctgaccgcgtgcctgttgaagaatgagccggcgactaataggcagtggcttggttaag 134938 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 134937 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 134884 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 134883 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 134824 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134823 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 134764 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134763 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 134704 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 134703 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 134644 Query: 362 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 421 ||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 134643 ggcaaactctgaataatagatatgacctcaaaataacaggggtcaaggtcggctagtgag 134584 Query: 422 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134583 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 134524 Query: 482 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 541 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 134523 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 134464 Query: 542 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 601 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 134463 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 134404 Query: 602 agat 605 |||| Sbjct: 134403 agat 134400 Score = 1001 bits (505), Expect = 0.0 Identities = 580/604 (96%), Gaps = 6/604 (0%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 106065 ctctgaccgcgtgcctgttgaagaatgagccggcgactaataggcagtggcttggttaag 106124 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 106125 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 106178 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 106179 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 106238 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106239 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 106298 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106299 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 106358 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 106359 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 106418 Query: 362 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 421 ||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 106419 ggcaaactctgaataatagatatgacctcaaaataacaggggtcaaggtcggctagtgag 106478 Query: 422 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106479 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 106538 Query: 482 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 541 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 106539 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 106598 Query: 542 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 601 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 106599 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 106658 Query: 602 agat 605 |||| Sbjct: 106659 agat 106662
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 997 bits (503), Expect = 0.0 Identities = 584/610 (95%), Gaps = 11/610 (1%) Strand = Plus / Minus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139025 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 138966 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||| ||||||| |||| ||||||||||||||||| ||||||| |||||||||| Sbjct: 138965 gggaac-----ccaccgg-agccatagcgaaagcgagtcttcatagggcaattgtcactg 138912 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 138911 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 138852 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138851 gtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 138792 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138791 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 138732 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 138731 actggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcg 138672 Query: 361 aggcaaactctgaatactagatatgaccc-----aaaaataacaggggtcaaggtcggcc 415 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 138671 aggcaaactctgaatactagatatgaccccaaaacaaaataacaggggtcaaggtcggcc 138612 Query: 416 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 475 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138611 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 138552 Query: 476 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 535 ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 138551 aggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggt 138492 Query: 536 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 595 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 138491 ttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttg 138432 Query: 596 cgctgaagat 605 ||| |||||| Sbjct: 138431 cgccgaagat 138422 Score = 997 bits (503), Expect = 0.0 Identities = 584/610 (95%), Gaps = 11/610 (1%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110920 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 110979 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||| ||||||| |||| ||||||||||||||||| ||||||| |||||||||| Sbjct: 110980 gggaac-----ccaccgg-agccatagcgaaagcgagtcttcatagggcaattgtcactg 111033 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 111034 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 111093 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111094 gtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 111153 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111154 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 111213 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 111214 actggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcg 111273 Query: 361 aggcaaactctgaatactagatatgaccc-----aaaaataacaggggtcaaggtcggcc 415 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 111274 aggcaaactctgaatactagatatgaccccaaaacaaaataacaggggtcaaggtcggcc 111333 Query: 416 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 475 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111334 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 111393 Query: 476 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 535 ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| Sbjct: 111394 aggcccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggt 111453 Query: 536 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 595 |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct: 111454 ttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttg 111513 Query: 596 cgctgaagat 605 ||| |||||| Sbjct: 111514 cgccgaagat 111523
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 995 bits (502), Expect = 0.0 Identities = 580/605 (95%), Gaps = 10/605 (1%) Strand = Plus / Minus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127303 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 127244 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 ||||| |||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 127243 gggaat-----ccaccg-tagccgtagcgaaagcgagtcttcatagggcgattgtcactg 127190 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 127189 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 127130 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127129 gtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 127070 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127069 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 127010 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 127009 actggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcg 126950 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| Sbjct: 126949 aggcaaactctgaatactagatatgacccca----aacaggggtcaaggtcggccagtga 126894 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126893 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 126834 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 126833 cctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcc 126774 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| | Sbjct: 126773 tagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccg 126714 Query: 601 aagat 605 ||||| Sbjct: 126713 aagat 126709 Score = 995 bits (502), Expect = 0.0 Identities = 580/605 (95%), Gaps = 10/605 (1%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107619 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 107678 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 ||||| |||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 107679 gggaat-----ccaccg-tagccgtagcgaaagcgagtcttcatagggcgattgtcactg 107732 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 107733 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 107792 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107793 gtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 107852 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107853 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 107912 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 107913 actggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcg 107972 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| Sbjct: 107973 aggcaaactctgaatactagatatgacccca----aacaggggtcaaggtcggccagtga 108028 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108029 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 108088 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 108089 cctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcc 108148 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| | Sbjct: 108149 tagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccg 108208 Query: 601 aagat 605 ||||| Sbjct: 108209 aagat 108213
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 993 bits (501), Expect = 0.0 Identities = 579/604 (95%), Gaps = 6/604 (0%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 560 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 619 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 620 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 673 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 674 ttatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaag 733 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 734 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 793 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 794 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 853 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 854 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 913 Query: 362 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 421 ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 914 ggcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgag 973 Query: 422 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 481 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 974 acggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 1033 Query: 482 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 541 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 1034 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 1093 Query: 542 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 601 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 1094 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 1153 Query: 602 agat 605 |||| Sbjct: 1154 agat 1157
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 993 bits (501), Expect = 0.0 Identities = 579/604 (95%), Gaps = 6/604 (0%) Strand = Plus / Minus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132437 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 132378 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 132377 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 132324 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 132323 ttatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaag 132264 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 132263 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 132204 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132203 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 132144 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 132143 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 132084 Query: 362 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 421 ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 132083 ggcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgag 132024 Query: 422 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 481 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132023 acggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 131964 Query: 482 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 541 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 131963 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 131904 Query: 542 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 601 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 131903 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 131844 Query: 602 agat 605 |||| Sbjct: 131843 agat 131840 Score = 993 bits (501), Expect = 0.0 Identities = 579/604 (95%), Gaps = 6/604 (0%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104327 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 104386 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 104387 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 104440 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 104441 ttatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaag 104500 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 104501 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 104560 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104561 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 104620 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 104621 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 104680 Query: 362 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 421 ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 104681 ggcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgag 104740 Query: 422 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 481 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104741 acggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 104800 Query: 482 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 541 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 104801 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 104860 Query: 542 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 601 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 104861 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 104920 Query: 602 agat 605 |||| Sbjct: 104921 agat 104924
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 993 bits (501), Expect = 0.0 Identities = 579/604 (95%), Gaps = 6/604 (0%) Strand = Plus / Minus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133398 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 133339 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 133338 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 133285 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 133284 ttatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaag 133225 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 133224 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 133165 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133164 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 133105 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 133104 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 133045 Query: 362 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 421 ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 133044 ggcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgag 132985 Query: 422 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 481 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132984 acggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 132925 Query: 482 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 541 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 132924 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 132865 Query: 542 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 601 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 132864 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 132805 Query: 602 agat 605 |||| Sbjct: 132804 agat 132801 Score = 993 bits (501), Expect = 0.0 Identities = 579/604 (95%), Gaps = 6/604 (0%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105251 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105310 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 105311 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 105364 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 105365 ttatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaag 105424 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 105425 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 105484 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105485 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 105544 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 105545 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 105604 Query: 362 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 421 ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 105605 ggcaaactctgaatactagatatgacctcaaaataactggggtcaaggtcggccagtgag 105664 Query: 422 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 481 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105665 acggtgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 105724 Query: 482 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 541 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 105725 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 105784 Query: 542 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 601 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 105785 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 105844 Query: 602 agat 605 |||| Sbjct: 105845 agat 105848
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 987 bits (498), Expect = 0.0 Identities = 580/605 (95%), Gaps = 7/605 (1%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1056 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 1115 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 1116 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 1169 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1170 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 1229 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1230 tgagggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 1289 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1290 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 1349 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 1350 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 1409 Query: 362 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 421 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1410 ggcaaactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgag 1469 Query: 422 acgat-gggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1470 acgatggggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 1529 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 1530 cctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcc 1589 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| | Sbjct: 1590 tagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccg 1649 Query: 601 aagat 605 ||||| Sbjct: 1650 aagat 1654
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 985 bits (497), Expect = 0.0 Identities = 512/516 (99%), Gaps = 1/516 (0%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 470 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 529 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 530 gggaacggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 588 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 589 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 648 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 649 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 708 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 709 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 768 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 769 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 828 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 829 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 888 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 889 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 948 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggt 516 |||||||||||||||||||||||||||||| ||||| Sbjct: 949 cctaaatgaccgctcagtgataaaggaggtaggggt 984
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 985 bits (497), Expect = 0.0 Identities = 578/604 (95%), Gaps = 6/604 (0%) Strand = Plus / Minus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131306 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 131247 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 |||| ||||||| |||||||||||||||||||||| | ||||| ||||||||||| Sbjct: 131246 ggaaa-----ccaccgg-agccgtagcgaaagcgagtcttcacagggcaattgtcactgc 131193 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 131192 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 131133 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131132 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 131073 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131072 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 131013 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 || ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 131012 ctagacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 130953 Query: 362 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 421 ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 130952 ggcaaactctgaatactagatatgacctcaaaataacaagggtcaaggtcggccagtgag 130893 Query: 422 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130892 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 130833 Query: 482 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 541 ||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||| Sbjct: 130832 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacaaccaggaggtttgcct 130773 Query: 542 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 601 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 130772 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 130713 Query: 602 agat 605 |||| Sbjct: 130712 agat 130709 Score = 985 bits (497), Expect = 0.0 Identities = 578/604 (95%), Gaps = 6/604 (0%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104088 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 104147 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 |||| ||||||| |||||||||||||||||||||| | ||||| ||||||||||| Sbjct: 104148 ggaaa-----ccaccgg-agccgtagcgaaagcgagtcttcacagggcaattgtcactgc 104201 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 104202 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 104261 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104262 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 104321 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104322 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 104381 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 || ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 104382 ctagacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 104441 Query: 362 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 421 ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 104442 ggcaaactctgaatactagatatgacctcaaaataacaagggtcaaggtcggccagtgag 104501 Query: 422 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104502 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 104561 Query: 482 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 541 ||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||| Sbjct: 104562 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacaaccaggaggtttgcct 104621 Query: 542 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 601 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 104622 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 104681 Query: 602 agat 605 |||| Sbjct: 104682 agat 104685
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 977 bits (493), Expect = 0.0 Identities = 572/597 (95%), Gaps = 6/597 (1%) Strand = Plus / Plus Query: 9 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgg 68 ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| Sbjct: 574 cgcgtgcctgttgaaaaatgagccggcgactcatacgcagtggcttggttaagggaac-- 631 Query: 69 aacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgga 128 ||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||| Sbjct: 632 ---ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatgga 687 Query: 129 cccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggt 188 |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 688 cccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggt 747 Query: 189 ccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccact 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 748 ccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccact 807 Query: 249 cgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggaca 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 808 cgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggaca 867 Query: 309 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 368 ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 868 tctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaac 927 Query: 369 tctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgg 428 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 928 tctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgagacgatgg 987 Query: 429 gggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatg 488 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 988 gggataagcttcatcgtccagagggaaacagcccggatcaccagctaaggcccctaaatg 1047 Query: 489 accgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagca 548 |||||||||||||||||||||| |||||||| |||||||||||||||||||||| ||||| Sbjct: 1048 accgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctaaaagca 1107 Query: 549 gccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 605 ||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 1108 gccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 1164
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 975 bits (492), Expect = 0.0 Identities = 577/605 (95%), Gaps = 13/605 (2%) Strand = Plus / Minus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134424 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 134365 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||| ||||||| |||||||||||||||||||||| ||||||| |||||||||| Sbjct: 134364 gggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactg 134311 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 134310 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 134251 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134250 gtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 134191 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134190 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 134131 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 134130 actggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcg 134071 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||||||||||| || ||| |||||||||||||||||||| Sbjct: 134070 aggcaaactctgaatactagatatgatcccaaa-------gggtcaaggtcggccagtga 134018 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134017 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 133958 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 133957 cctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcc 133898 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| | Sbjct: 133897 tagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccg 133838 Query: 601 aagat 605 ||||| Sbjct: 133837 aagat 133833 Score = 975 bits (492), Expect = 0.0 Identities = 577/605 (95%), Gaps = 13/605 (2%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105858 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 105917 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||| ||||||| |||||||||||||||||||||| ||||||| |||||||||| Sbjct: 105918 gggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactg 105971 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 105972 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 106031 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106032 gtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 106091 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106092 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 106151 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 106152 actggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcg 106211 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||||||||||| || ||| |||||||||||||||||||| Sbjct: 106212 aggcaaactctgaatactagatatgatcccaaa-------gggtcaaggtcggccagtga 106264 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106265 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 106324 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 106325 cctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcc 106384 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| | Sbjct: 106385 tagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccg 106444 Query: 601 aagat 605 ||||| Sbjct: 106445 aagat 106449
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 969 bits (489), Expect = 0.0 Identities = 576/604 (95%), Gaps = 6/604 (0%) Strand = Plus / Minus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 129969 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggttaag 129910 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 |||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 129909 ggaaa-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 129856 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 129855 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 129796 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129795 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 129736 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129735 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 129676 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 | |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 129675 ccggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 129616 Query: 362 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 421 ||||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||| Sbjct: 129615 ggcaaactctgaatactagatatgacctgaaaataataagggtcaaggtcggccagtgag 129556 Query: 422 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 481 |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 129555 acgatgagggataagcttcatcgtcgagagggaaacagcccagatcaccagctaaggccc 129496 Query: 482 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 541 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 129495 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 129436 Query: 542 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 601 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 129435 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 129376 Query: 602 agat 605 |||| Sbjct: 129375 agat 129372 Score = 969 bits (489), Expect = 0.0 Identities = 576/604 (95%), Gaps = 6/604 (0%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 102487 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggttaag 102546 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 |||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 102547 ggaaa-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 102600 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 102601 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 102660 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102661 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 102720 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102721 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 102780 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 | |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 102781 ccggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 102840 Query: 362 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 421 ||||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||| Sbjct: 102841 ggcaaactctgaatactagatatgacctgaaaataataagggtcaaggtcggccagtgag 102900 Query: 422 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 481 |||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 102901 acgatgagggataagcttcatcgtcgagagggaaacagcccagatcaccagctaaggccc 102960 Query: 482 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 541 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 102961 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 103020 Query: 542 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 601 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 103021 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 103080 Query: 602 agat 605 |||| Sbjct: 103081 agat 103084
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 965 bits (487), Expect = 0.0 Identities = 580/606 (95%), Gaps = 9/606 (1%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2329 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 2388 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 2389 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 2442 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 2443 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 2502 Query: 182 cagagg-tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2503 tggagggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 2562 Query: 241 atg-ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 299 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2563 atggccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 2622 Query: 300 gactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 359 |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 2623 gactggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 2682 Query: 360 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 419 |||||||||||||||||||||||||||| ||||| |||||||||||||||||||| |||| Sbjct: 2683 gaggcaaactctgaatactagatatgactcaaaa-taacaggggtcaaggtcggctagtg 2741 Query: 420 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 479 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 2742 agacgatgggggataagcttcatcgtcgagagggaaacagtccggatcaccagctaaggc 2801 Query: 480 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 539 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 2802 ccctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgc 2861 Query: 540 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 599 |||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||| Sbjct: 2862 ctagaagcagccacccttgaaagagtgcgtaatagcscactgatcgagcgctcttgcgcc 2921 Query: 600 gaagat 605 |||||| Sbjct: 2922 gaagat 2927
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 963 bits (486), Expect = 0.0 Identities = 570/597 (95%), Gaps = 6/597 (1%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 569 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 628 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 ||||| ||||||| |||||||||||||||||||||| |||||| ||||||||||| Sbjct: 629 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcgtagggcaattgtcactgc 682 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 683 ttatggacccgaacctgggtgatctatccatgaccaggatggagcttgggtgaaactaag 742 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 743 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 802 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 803 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 862 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 863 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 922 Query: 362 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 421 ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct: 923 ggcaaactctgaatactagatatgacctcaaaataacaggggttaaggtcggccagtgag 982 Query: 422 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 481 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 983 acaatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 1042 Query: 482 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 541 ||||||||||||||| ||||||||||||| |||||||| ||||||||| ||||||||||| Sbjct: 1043 ctaaatgaccgctcaatgataaaggaggtaggggtgcacagacagccacgaggtttgcct 1102 Query: 542 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 598 | |||||||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 1103 ataagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgc 1159
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 952 bits (480), Expect = 0.0 Identities = 570/597 (95%), Gaps = 6/597 (1%) Strand = Plus / Plus Query: 9 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgg 68 ||||||||||||||| ||||| ||| ||| ||||| |||||||||||||||| || | Sbjct: 588 cgcgtgcctgttgaaaaatgacccg-cgaatcataagcagtggcttggttaacgg----g 642 Query: 69 aacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgga 128 |||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||| Sbjct: 643 aacccaccgg-agccgtagcgaaagcgagtcttcgtagggcaattgtcactgcttatgga 701 Query: 129 cccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggt 188 |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 702 cccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggt 761 Query: 189 ccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccact 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 762 ccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccact 821 Query: 249 cgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggaca 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 822 cgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggaca 881 Query: 309 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 368 ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 882 tctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaac 941 Query: 369 tctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgg 428 |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 942 tctgaatactagatatgacctcaaaataacaggggttaaggtcggccagtgagacgatgg 1001 Query: 429 gggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatg 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1002 gggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatg 1061 Query: 489 accgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagca 548 |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| Sbjct: 1062 accgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagca 1121 Query: 549 gccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 605 ||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 1122 gccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 1178
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 952 bits (480), Expect = 0.0 Identities = 492/495 (99%), Gaps = 1/495 (0%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 355 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 414 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 415 gggaacggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 473 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 474 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 533 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 534 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 593 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 594 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 653 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 654 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 713 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 714 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 773 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 774 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 833 Query: 481 cctaaatgaccgctc 495 ||||||||||||||| Sbjct: 834 cctaaatgaccgctc 848
>gb|AY848693.1| Vitis pseudoreticulata clone EST-4 23S ribosomal RNA, partial sequence; chloroplast Length = 673 Score = 950 bits (479), Expect = 0.0 Identities = 573/604 (94%), Gaps = 13/604 (2%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 105 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 106 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 159 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 160 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 219 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 220 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 279 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 280 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttga 339 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 340 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 399 Query: 362 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 421 ||||||||||||||||||||| || || |||| |||||||||||||||||||| Sbjct: 400 ggcaaactctgaatactagatctggcctcaaaa-------ggtcaaggtcggccagtgag 452 Query: 422 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 453 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 512 Query: 482 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 541 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 513 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 572 Query: 542 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 601 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 573 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 632 Query: 602 agat 605 |||| Sbjct: 633 agat 636
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 950 bits (479), Expect = 0.0 Identities = 573/604 (94%), Gaps = 13/604 (2%) Strand = Plus / Minus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139799 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 139740 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 139739 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 139686 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 139685 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 139626 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139625 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 139566 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 139565 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttga 139506 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 139505 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 139446 Query: 362 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 421 ||||||||||||||||||||| || || |||| |||||||||||||||||||| Sbjct: 139445 ggcaaactctgaatactagatctggcctcaaaa-------ggtcaaggtcggccagtgag 139393 Query: 422 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139392 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 139333 Query: 482 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 541 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 139332 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 139273 Query: 542 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 601 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 139272 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 139213 Query: 602 agat 605 |||| Sbjct: 139212 agat 139209 Score = 950 bits (479), Expect = 0.0 Identities = 573/604 (94%), Gaps = 13/604 (2%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110261 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 110320 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 110321 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 110374 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 110375 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 110434 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110435 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 110494 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 110495 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttga 110554 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 110555 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 110614 Query: 362 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 421 ||||||||||||||||||||| || || |||| |||||||||||||||||||| Sbjct: 110615 ggcaaactctgaatactagatctggcctcaaaa-------ggtcaaggtcggccagtgag 110667 Query: 422 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110668 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 110727 Query: 482 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 541 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 110728 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 110787 Query: 542 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 601 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 110788 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 110847 Query: 602 agat 605 |||| Sbjct: 110848 agat 110851
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 948 bits (478), Expect = 0.0 Identities = 548/570 (96%), Gaps = 6/570 (1%) Strand = Plus / Plus Query: 36 gactcataggcagtggcttggttaagggaacggaacccaccggnagccgtagcgaaagcg 95 ||||||||| |||||||||||||||||||| ||||||| |||||||||||||||| Sbjct: 592 gactcatagtaagtggcttggttaagggaac-----ccaccgg-agccgtagcgaaagcg 645 Query: 96 agtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctatccatgac 155 |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 646 agtcttcatagggcaattgtcactgcttatggacccgaacctgggtgatctatccatgac 705 Query: 156 caggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcag 215 ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| Sbjct: 706 caggatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcag 765 Query: 216 cggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccc 275 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 766 cggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccc 825 Query: 276 gaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc 335 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 826 gaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc 885 Query: 336 gggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaat 395 |||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 886 gggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaaat 945 Query: 396 aacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaa 455 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 946 aacaggggttaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaa 1005 Query: 456 acagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggggg 515 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1006 acagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagggg 1065 Query: 516 tgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagc 575 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1066 tgcaaagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagc 1125 Query: 576 tcactgatcgagcgcccttgcgctgaagat 605 ||||||||||||||| ||||||| |||||| Sbjct: 1126 tcactgatcgagcgctcttgcgccgaagat 1155
>gb|DQ176643.1| Vitis pseudoreticulata clone EST-423 23S ribosomal RNA, partial sequence; chloroplast Length = 674 Score = 942 bits (475), Expect = 0.0 Identities = 572/604 (94%), Gaps = 13/604 (2%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 121 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 122 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 175 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 176 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 235 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 236 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 295 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 296 tgccgctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttga 355 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 356 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 415 Query: 362 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 421 ||||||||||||||||||||| || || |||| |||||||||||||||||||| Sbjct: 416 ggcaaactctgaatactagatctggcctcaaaa-------ggtcaaggtcggccagtgag 468 Query: 422 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 469 acgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccc 528 Query: 482 ctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcct 541 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 529 ctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcct 588 Query: 542 agaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctga 601 |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| || Sbjct: 589 agaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccga 648 Query: 602 agat 605 |||| Sbjct: 649 agat 652
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 940 bits (474), Expect = 0.0 Identities = 567/597 (94%), Gaps = 6/597 (1%) Strand = Plus / Plus Query: 9 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgg 68 ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| Sbjct: 588 cgcgtgcctgttgaa-aatgagccggcgactcataggaagtggcttggttaagggaac-- 644 Query: 69 aacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgga 128 ||||||| |||||||||||||||||||||| |||||| |||||||||||||||||| Sbjct: 645 ---ccaccggaagccgtagcgaaagcgagtcttcgtagggcaattgtcactgcttatgga 701 Query: 129 cccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggt 188 |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 702 cccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggt 761 Query: 189 ccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccact 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 762 ccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccact 821 Query: 249 cgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggaca 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 822 cgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggaca 881 Query: 309 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 368 |||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 882 tctaagggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaac 941 Query: 369 tctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgg 428 ||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct: 942 tctgaatactaaatatgacctcaaaataacaggggttaaggtcggccagtgagacgatgg 1001 Query: 429 gggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatg 488 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1002 gggataagcttcatcgtccagagggaaacagcccggatcaccagctaaggcccctaaatg 1061 Query: 489 accgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagca 548 |||||||||||||||||||||| |||||||| ||||||||| |||||||||||| ||||| Sbjct: 1062 accgctcagtgataaaggaggtaggggtgcacagacagccaagaggtttgcctaaaagca 1121 Query: 549 gccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 605 ||||||||| ||||||||||||||| |||||||||||||||| ||||||| |||||| Sbjct: 1122 gccacccttgaaagagtgcgtaataactcactgatcgagcgctcttgcgccgaagat 1178
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 940 bits (474), Expect = 0.0 Identities = 575/605 (95%), Gaps = 8/605 (1%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177405 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 177464 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 177465 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 177518 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 177519 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 177578 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 177579 tggaggtccga-ccgactgatgttgaagaatcagcgggtgagttgtggttaggggtgaaa 177637 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177638 tgccactcgcacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 177697 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 ||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||| Sbjct: 177698 ctggacatctaggggtaaagcacggtttcggtgcgggccgcgagagcggtaccaaatcga 177757 Query: 362 ggcaaactctgaatactagatatgacccaaaaataaca-ggggtcaaggtcggccagtga 420 ||||||||||||||||||||||||||| ||||||| | |||| |||||||||| ||||| Sbjct: 177758 ggcaaactctgaatactagatatgacctcaaaataagaggggggcaaggtcggctagtga 177817 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 177818 gacgatgggggataagcttcatcgtcgagagggaaagagcccggatcaccagctaaggcc 177877 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 177878 cctaaatgaccgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcc 177937 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| | Sbjct: 177938 tagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccg 177997 Query: 601 aagat 605 ||||| Sbjct: 177998 aagat 178002 Score = 48.1 bits (24), Expect = 0.034 Identities = 51/60 (85%) Strand = Plus / Plus Query: 522 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 581 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 419034 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 419093 Score = 48.1 bits (24), Expect = 0.034 Identities = 51/60 (85%) Strand = Plus / Plus Query: 522 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 581 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 68284 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 68343 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 476 aggcccctaaatgaccgctcag 497 |||||||||||||||||||||| Sbjct: 327554 aggcccctaaatgaccgctcag 327575 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 444 gtcgagagggaaacagcccggatc 467 ||||||||||||||||||| |||| Sbjct: 418956 gtcgagagggaaacagcccagatc 418979 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 444 gtcgagagggaaacagcccggatc 467 ||||||||||||||||||| |||| Sbjct: 68206 gtcgagagggaaacagcccagatc 68229
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 926 bits (467), Expect = 0.0 Identities = 522/539 (96%), Gaps = 1/539 (0%) Strand = Plus / Plus Query: 67 ggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatg 126 |||||||||||| |||||||||||||||||||||| ||||||| |||||||||||||||| Sbjct: 602 ggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatg 660 Query: 127 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 186 |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| Sbjct: 661 gacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggag 720 Query: 187 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 246 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 721 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 780 Query: 247 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 306 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 781 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 840 Query: 307 catctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 366 ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| Sbjct: 841 catctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaa 900 Query: 367 actctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgat 426 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 901 actctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgagacgat 960 Query: 427 gggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaa 486 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 961 gggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaa 1020 Query: 487 tgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaag 546 ||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 1021 tgaccgcccagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaag 1080 Query: 547 cagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 605 ||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 1081 cagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 1139
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 924 bits (466), Expect = 0.0 Identities = 478/481 (99%), Gaps = 1/481 (0%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 563 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 622 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 623 gggaacggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 681 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 682 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 741 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 742 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 801 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 802 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 861 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 862 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 921 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 922 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 981 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 982 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 1041 Query: 481 c 481 | Sbjct: 1042 c 1042
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 916 bits (462), Expect = 0.0 Identities = 560/590 (94%), Gaps = 7/590 (1%) Strand = Plus / Plus Query: 9 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgg 68 |||||||||||| || ||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 588 cgcgtgcctgtttaaaaatgagccg-cgactcataggaagtggcttggttaagggaac-- 644 Query: 69 aacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgga 128 ||| ||| |||||||||||||||||||||| |||||| |||||||||||||||||| Sbjct: 645 ---ccaacgg-agccgtagcgaaagcgagtcttcgtagggcaattgtcactgcttatgga 700 Query: 129 cccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggt 188 |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 701 cccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggt 760 Query: 189 ccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccact 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 761 ccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccact 820 Query: 249 cgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggaca 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 821 cgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggaca 880 Query: 309 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 368 ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 881 tctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgaggcaaac 940 Query: 369 tctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgg 428 |||||||||||||||||||| |||||||||||||| |||||||||||||||||| |||| Sbjct: 941 tctgaatactagatatgacctcaaaataacaggggttaaggtcggccagtgagaccatgg 1000 Query: 429 gggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatg 488 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1001 gggataagcttcatcgtccagagggaaacagcccggatcaccagctaaggcccctaaatg 1060 Query: 489 accgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagca 548 |||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||| Sbjct: 1061 accgctcagtgataaaggaggtaggggtgcagagacagccaagaggtttgcctagaagca 1120 Query: 549 gccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 598 ||||||||| |||||||||||||||||||||||||| ||||| ||||||| Sbjct: 1121 gccacccttgaaagagtgcgtaatagctcactgatccagcgctcttgcgc 1170
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 910 bits (459), Expect = 0.0 Identities = 558/590 (94%), Gaps = 12/590 (2%) Strand = Plus / Plus Query: 9 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgg 68 ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| Sbjct: 588 cgcgtgcctgttgaagaattaaccggcgactcataggcagtggcttggttaagggaac-- 645 Query: 69 aacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgga 128 ||||||| |||||||||||||||||||||| |||||| |||||||||||||||||| Sbjct: 646 ---ccaccgg-agccgtagcgaaagcgagtcttcgtagggcaattgtcactgcttatgga 701 Query: 129 cccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggt 188 |||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 702 cccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggaggt 761 Query: 189 ccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccact 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 762 ccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccact 821 Query: 249 cgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggaca 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 822 cgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggaca 881 Query: 309 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 368 ||||||||||||||||||||||||||||||| ||| |||| ||||||||||||||||||| Sbjct: 882 tctaggggtaaagcactgtttcggtgcgggccgcgagagcagtaccaaatcgaggcaaac 941 Query: 369 tctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgg 428 |||||||||||||||||||| | |||||||| ||||||||||| ||||||||||| Sbjct: 942 tctgaatactagatatgacc------tcacaggggttaaggtcggccaatgagacgatgg 995 Query: 429 gggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatg 488 ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 996 gggataagcttcatcttccagagggaaacagcccggatcaccagctaaggcccctaaatg 1055 Query: 489 accgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagca 548 |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||| Sbjct: 1056 accgctcagtgataaaggaggtaggggtgcaaagacagccacgaggtttgcctagaagca 1115 Query: 549 gccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 598 ||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 1116 gccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgc 1165
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 908 bits (458), Expect = 0.0 Identities = 570/605 (94%), Gaps = 7/605 (1%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 560 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggcttggttaag 619 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 ||||| ||||||| |||| |||||||||||||| || ||||| | ||||||||||| Sbjct: 620 ggaac-----ccaccgg-agccatagcgaaagcgagtattcataggactattgtcactgc 673 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 674 ttatggacccgaacctgggtgatctatccatgaccaggatgaagctttggtgaaactaag 733 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 734 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 793 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 794 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 853 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 ||||||||||||||||||||||||||||| |||||||| | | ||||||||||||||||| Sbjct: 854 ctggacatctaggggtaaagcactgtttcagtgcgggccgtgagagcggtaccaaatcga 913 Query: 362 ggcaaactctgaatactag-atatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||| |||||||| ||||||||||||||| ||||||||||||||| Sbjct: 914 agcaaactctgaatactagaatatgacctaaaaataacaggggtaaaggtcggccagtga 973 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 974 gacgatgggggataagcttcatcgtcgagagggaaacagcccagatcaccagctaaggcc 1033 Query: 481 cctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcc 540 ||||| ||| |||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 1034 cctaattgatcgctcagtgataaaggaggtaggggtgcagagacagccaggaggtttgcc 1093 Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctg 600 ||||||||||||||||| ||| |||||||||||||| ||||||||||||| ||||||| | Sbjct: 1094 tagaagcagccacccttgaaatagtgcgtaatagcttactgatcgagcgctcttgcgccg 1153 Query: 601 aagat 605 ||||| Sbjct: 1154 aagat 1158
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 904 bits (456), Expect = 0.0 Identities = 566/599 (94%), Gaps = 8/599 (1%) Strand = Plus / Minus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 52125 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggcttggttaag 52066 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 ||||| ||||||| |||| |||||||||||||| || ||||||| ||||||||||| Sbjct: 52065 ggaac-----ccaccgg-agccatagcgaaagcgagtattcatagggcaattgtcactgc 52012 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 52011 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 51952 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51951 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 51892 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51891 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 51832 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 ||||||||||||||||||||||||||||| |||||||| | | ||||||||||||||||| Sbjct: 51831 ctggacatctaggggtaaagcactgtttcagtgcgggccgtgagagcggtaccaaatcga 51772 Query: 362 ggcaaactctgaatactag-atatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||| |||||||| | |||||| |||||| ||||||||||||||| Sbjct: 51771 agcaaactctgaatactagaatatgacctacaaataataggggtaaaggtcggccagtga 51712 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51711 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 51652 Query: 481 cctaaatgaccgctcagtgataaaggagg-tgggggtgcaaagacagccaggaggtttgc 539 ||||| ||| ||||||||||||||||||| | |||||||| ||||||||||||||||||| Sbjct: 51651 cctaattgatcgctcagtgataaaggaggttaggggtgcagagacagccaggaggtttgc 51592 Query: 540 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 598 |||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||||| Sbjct: 51591 ctagaagcagccacccttgaaagagtgcgtaatagcttactgatcgagcgctcttgcgc 51533 Score = 904 bits (456), Expect = 0.0 Identities = 566/599 (94%), Gaps = 8/599 (1%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 37703 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggcttggttaag 37762 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 ||||| ||||||| |||| |||||||||||||| || ||||||| ||||||||||| Sbjct: 37763 ggaac-----ccaccgg-agccatagcgaaagcgagtattcatagggcaattgtcactgc 37816 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 37817 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 37876 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37877 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 37936 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 37937 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 37996 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 ||||||||||||||||||||||||||||| |||||||| | | ||||||||||||||||| Sbjct: 37997 ctggacatctaggggtaaagcactgtttcagtgcgggccgtgagagcggtaccaaatcga 38056 Query: 362 ggcaaactctgaatactag-atatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||| |||||||| | |||||| |||||| ||||||||||||||| Sbjct: 38057 agcaaactctgaatactagaatatgacctacaaataataggggtaaaggtcggccagtga 38116 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 38117 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 38176 Query: 481 cctaaatgaccgctcagtgataaaggagg-tgggggtgcaaagacagccaggaggtttgc 539 ||||| ||| ||||||||||||||||||| | |||||||| ||||||||||||||||||| Sbjct: 38177 cctaattgatcgctcagtgataaaggaggttaggggtgcagagacagccaggaggtttgc 38236 Query: 540 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 598 |||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||||| Sbjct: 38237 ctagaagcagccacccttgaaagagtgcgtaatagcttactgatcgagcgctcttgcgc 38295
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 904 bits (456), Expect = 0.0 Identities = 566/599 (94%), Gaps = 8/599 (1%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 4631 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagcggcttggttaag 4690 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 ||||| ||||||| |||| |||||||||||||| || ||||||| ||||||||||| Sbjct: 4691 ggaac-----ccaccgg-agccatagcgaaagcgagtattcatagggcaattgtcactgc 4744 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 4745 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 4804 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4805 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 4864 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4865 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 4924 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 ||||||||||||||||||||||||||||| |||||||| | | ||||||||||||||||| Sbjct: 4925 ctggacatctaggggtaaagcactgtttcagtgcgggccgtgagagcggtaccaaatcga 4984 Query: 362 ggcaaactctgaatactag-atatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||| |||||||| | |||||| |||||| ||||||||||||||| Sbjct: 4985 agcaaactctgaatactagaatatgacctacaaataataggggtaaaggtcggccagtga 5044 Query: 421 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5045 gacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcc 5104 Query: 481 cctaaatgaccgctcagtgataaaggagg-tgggggtgcaaagacagccaggaggtttgc 539 ||||| ||| ||||||||||||||||||| | |||||||| ||||||||||||||||||| Sbjct: 5105 cctaattgatcgctcagtgataaaggaggttaggggtgcagagacagccaggaggtttgc 5164 Query: 540 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 598 |||||||||||||||||| |||||||||||||||||| ||||||||||||| ||||||| Sbjct: 5165 ctagaagcagccacccttgaaagagtgcgtaatagcttactgatcgagcgctcttgcgc 5223
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 888 bits (448), Expect = 0.0 Identities = 570/607 (93%), Gaps = 8/607 (1%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| |||||||||||||||||||||||||||||||| ||||| |||||| ||||||| Sbjct: 562 tctctgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggttaa 621 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||| ||||||| |||||||||||||||||||||| |||||| ||||||||| Sbjct: 622 gggaac-----ccaccgg-agccgtagcgaaagcgagtcttcctagggcaattgtcacta 675 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 676 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 735 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 736 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 795 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 796 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 855 Query: 301 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 359 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 856 actggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 915 Query: 360 gaggcaaactctgaatactagatatgacccaaaaataacagggg-tcaaggtcggccagt 418 ||||||||||||||||||||||||||| || |||||||||||| | |||||| ||||| Sbjct: 916 gaggcaaactctgaatactagatatgatccccaaataacaggggataaaggtcaaccagt 975 Query: 419 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 478 |||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||| Sbjct: 976 gagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagctaagg 1035 Query: 479 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 538 ||||||||||||||||||||| |||||||||| || |||||||||||||||||||||||| Sbjct: 1036 cccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggaggtttg 1095 Query: 539 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 598 ||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||| Sbjct: 1096 cctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgc 1155 Query: 599 tgaagat 605 |||||| Sbjct: 1156 cgaagat 1162
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 856 bits (432), Expect = 0.0 Identities = 566/607 (93%), Gaps = 8/607 (1%) Strand = Plus / Minus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| |||||||||||||||||||||||||||||||| ||||| |||||| ||||||| Sbjct: 117587 tctctgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggttaa 117528 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||| ||||||| |||||||||||||||||||||| |||||| ||||||||| Sbjct: 117527 gggaac-----ccaccgg-agccgtagcgaaagcgagtcttcctagggcaattgtcacta 117474 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| Sbjct: 117473 cttatggacccgaacctgggtgatctaaccatgaccaggatgaagcttgggtgaaactaa 117414 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 117413 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 117354 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117353 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 117294 Query: 301 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 359 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 117293 actggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 117234 Query: 360 gaggcaaactctgaatactagatatgacccaaaaataaca-ggggtcaaggtcggccagt 418 ||||||||||||||||||||||||||| || |||||| | ||||| | |||| ||||| Sbjct: 117233 gaggcaaactctgaatactagatatgatccccaaataatagggggtaatggtcaaccagt 117174 Query: 419 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 478 |||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||| Sbjct: 117173 gagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagctaagg 117114 Query: 479 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 538 |||||||||||||||| |||| |||||||||| || |||||||||||||||||||||||| Sbjct: 117113 cccctaaatgaccgctaagtggtaaaggaggtaggagtgcaaagacagccaggaggtttg 117054 Query: 539 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 598 ||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||| Sbjct: 117053 cctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgc 116994 Query: 599 tgaagat 605 |||||| Sbjct: 116993 cgaagat 116987 Score = 856 bits (432), Expect = 0.0 Identities = 566/607 (93%), Gaps = 8/607 (1%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| |||||||||||||||||||||||||||||||| ||||| |||||| ||||||| Sbjct: 90515 tctctgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggttaa 90574 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||| ||||||| |||||||||||||||||||||| |||||| ||||||||| Sbjct: 90575 gggaac-----ccaccgg-agccgtagcgaaagcgagtcttcctagggcaattgtcacta 90628 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| Sbjct: 90629 cttatggacccgaacctgggtgatctaaccatgaccaggatgaagcttgggtgaaactaa 90688 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 90689 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 90748 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90749 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 90808 Query: 301 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 359 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 90809 actggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 90868 Query: 360 gaggcaaactctgaatactagatatgacccaaaaataaca-ggggtcaaggtcggccagt 418 ||||||||||||||||||||||||||| || |||||| | ||||| | |||| ||||| Sbjct: 90869 gaggcaaactctgaatactagatatgatccccaaataatagggggtaatggtcaaccagt 90928 Query: 419 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 478 |||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||||| Sbjct: 90929 gagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagctaagg 90988 Query: 479 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 538 |||||||||||||||| |||| |||||||||| || |||||||||||||||||||||||| Sbjct: 90989 cccctaaatgaccgctaagtggtaaaggaggtaggagtgcaaagacagccaggaggtttg 91048 Query: 539 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 598 ||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||| Sbjct: 91049 cctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgc 91108 Query: 599 tgaagat 605 |||||| Sbjct: 91109 cgaagat 91115
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 850 bits (429), Expect = 0.0 Identities = 565/606 (93%), Gaps = 11/606 (1%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 86825 tctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaa 86884 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||| ||||||| ||||||||||| |||||||||| || |||| |||||||||| Sbjct: 86885 gggaac-----ccaccgg-agccgtagcgagagcgagtcttcatggggcaattgtcactg 86938 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 86939 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 86998 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 86999 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 87058 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87059 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 87118 Query: 301 actgga-catctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 359 |||||| ||||||||||||||||||||||||||| ||||| ||| ||||||||||||||| Sbjct: 87119 actggaccatctaggggtaaagcactgtttcggtacgggccgcgagagcggtaccaaatc 87178 Query: 360 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 419 ||||||||||||||||||||||| || ||| ||||| |||||| | |||| |||||| Sbjct: 87179 gaggcaaactctgaatactagat-tgcccc---aataaaaggggtaagggtcaaccagtg 87234 Query: 420 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 479 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 87235 agacgatgggggataagcttcatcgtcgagaggggaacagcccagatcaccagctaaggc 87294 Query: 480 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 539 |||||||||||||||||||||| ||||| || | ||||||||||||||||||||||||| Sbjct: 87295 ccctaaatgaccgctcagtgatgaaggaagtacgagtgcaaagacagccaggaggtttgc 87354 Query: 540 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 599 ||||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 87355 ctagaagcagccaaccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgcc 87414 Query: 600 gaagat 605 |||||| Sbjct: 87415 gaagat 87420
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 842 bits (425), Expect = 0.0 Identities = 537/568 (94%), Gaps = 10/568 (1%) Strand = Plus / Plus Query: 42 taggcagtggcttggttaa-gggaacggaacccaccggnagccgtagcgaaagcgagtct 100 ||||||||||||||||||| |||||| |||||||| | ||||||||||||||||||| Sbjct: 613 taggcagtggcttggttaaagggaac----cccaccggaa-ccgtagcgaaagcgagtct 667 Query: 101 taatagggcgattgtcactgcttatggacccgaacct--gggtgatctatccatgaccag 158 | ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 668 tcatagggcaattgtcactgcttatggacccgaaccctggggtgatctatccatgaccag 727 Query: 159 gatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcgg 218 |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 728 gatgaagcttgggtgaaactaagtggaggtccgaaccgactgatgttgaagaatcagcgg 787 Query: 219 atgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccc-ga 277 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 788 atgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccccga 847 Query: 278 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 848 aatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgcgg 907 Query: 338 gctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 397 || ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 908 gccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctaaaaataa 967 Query: 398 caggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaac 457 || |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 968 caagggtcaaggtcggcaagtgagacgatgggggataagcttcatcgtcgagagggaaac 1027 Query: 458 agcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtg 517 ||||| ||||||| |||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 1028 agccctgatcacccgctaaggcccctaaatgatcgctcagtgataaaggaggtaggggtg 1087 Query: 518 caaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctc 577 || |||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||| Sbjct: 1088 cagagacagccaggaggtttg-ctataagcagccacccttgaaagagtgcgtaatagctc 1146 Query: 578 actgatcgagcgcccttgcgctgaagat 605 ||||||||||||| ||||||| |||||| Sbjct: 1147 actgatcgagcgctcttgcgccgaagat 1174
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 841 bits (424), Expect = 0.0 Identities = 564/607 (92%), Gaps = 8/607 (1%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| |||||||||||||||||||||||||||||||| ||||| |||||| ||||||| Sbjct: 562 tctctgaccgcgtgcctgttgaagaatgagccggcgacttataggtagtggcctggttaa 621 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 ||| || ||||||| |||||||||||||||||||||| | |||| ||||||||| Sbjct: 622 ggggac-----ccaccgg-agccgtagcgaaagcgagtcttcctggggcaattgtcacta 675 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct: 676 cttatggacccgaacctgggtgatctatccatgaccaggatgaagctcgggtgaaactaa 735 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 736 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 795 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 796 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 855 Query: 301 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 359 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 856 actggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 915 Query: 360 gaggcaaactctgaatactagatatgacccaaaaataacagggg-tcaaggtcggccagt 418 ||||||||||||||||||||||||||| | |||||| |||| | | |||| ||||| Sbjct: 916 gaggcaaactctgaatactagatatgatctccgaataacgggggataagggtcaaccagt 975 Query: 419 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 478 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 976 gagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcaccagctaagg 1035 Query: 479 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 538 ||||||||||||||||||||| |||||||||| || |||||||||||||||||||||||| Sbjct: 1036 cccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggaggtttg 1095 Query: 539 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 598 ||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||| Sbjct: 1096 cctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgc 1155 Query: 599 tgaagat 605 |||||| Sbjct: 1156 cgaagat 1162
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 829 bits (418), Expect = 0.0 Identities = 560/602 (93%), Gaps = 13/602 (2%) Strand = Plus / Minus Query: 4 ctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 63 ||| |||||||||||||||||||||||||||||||| |||||||||||| |||||||||| Sbjct: 145994 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaaggg 145935 Query: 64 aacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgctt 123 ||| ||||||| |||||||||||||||||||||| |||||| ||||||||||||| Sbjct: 145934 aac-----ccaccgg-agccgtagcgaaagcgagtcttcctagggcaattgtcactgctt 145881 Query: 124 atggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagca 183 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 145880 atggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtg 145821 Query: 184 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 243 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 145820 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatg 145761 Query: 244 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 303 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145760 ccaatcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 145701 Query: 304 ggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 362 |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 145700 ggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgag 145641 Query: 363 gcaaactctgaatactagatatga--cccaa---aaataacagg-ggtcaaggtcggcca 416 |||||||||||||||||| ||||| |||| ||| |||||| ||| |||||| |||| Sbjct: 145640 gcaaactctgaatactaggtatgatctccaaatgaaagaacaggaggtaaaggtcagcca 145581 Query: 417 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 476 |||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 145580 gtgagacggtgggggataagcttcatcgtcgagaggggaacagcccagatcaccagctaa 145521 Query: 477 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 536 ||||||||||||||||||||||| | |||||||| || ||||| |||||||||||| ||| Sbjct: 145520 ggcccctaaatgaccgctcagtggtgaaggaggtaggagtgcagagacagccaggaagtt 145461 Query: 537 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 596 ||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| Sbjct: 145460 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgc 145401 Query: 597 gc 598 || Sbjct: 145400 gc 145399 Score = 829 bits (418), Expect = 0.0 Identities = 560/602 (93%), Gaps = 13/602 (2%) Strand = Plus / Plus Query: 4 ctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 63 ||| |||||||||||||||||||||||||||||||| |||||||||||| |||||||||| Sbjct: 112468 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaaggg 112527 Query: 64 aacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgctt 123 ||| ||||||| |||||||||||||||||||||| |||||| ||||||||||||| Sbjct: 112528 aac-----ccaccgg-agccgtagcgaaagcgagtcttcctagggcaattgtcactgctt 112581 Query: 124 atggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagca 183 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 112582 atggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtg 112641 Query: 184 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 243 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 112642 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatg 112701 Query: 244 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 303 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112702 ccaatcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 112761 Query: 304 ggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 362 |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 112762 ggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgag 112821 Query: 363 gcaaactctgaatactagatatga--cccaa---aaataacagg-ggtcaaggtcggcca 416 |||||||||||||||||| ||||| |||| ||| |||||| ||| |||||| |||| Sbjct: 112822 gcaaactctgaatactaggtatgatctccaaatgaaagaacaggaggtaaaggtcagcca 112881 Query: 417 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 476 |||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||| Sbjct: 112882 gtgagacggtgggggataagcttcatcgtcgagaggggaacagcccagatcaccagctaa 112941 Query: 477 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 536 ||||||||||||||||||||||| | |||||||| || ||||| |||||||||||| ||| Sbjct: 112942 ggcccctaaatgaccgctcagtggtgaaggaggtaggagtgcagagacagccaggaagtt 113001 Query: 537 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgc 596 ||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| Sbjct: 113002 tgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctcttgc 113061 Query: 597 gc 598 || Sbjct: 113062 gc 113063
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 817 bits (412), Expect = 0.0 Identities = 561/606 (92%), Gaps = 10/606 (1%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 88911 tctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaa 88970 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||| ||||||| ||||||||||| |||||||||| || |||| |||||||||| Sbjct: 88971 gggaac-----ccaccgg-agccgtagcgagagcgagtcttcatggggcaattgtcactg 89024 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 89025 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 89084 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 89085 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 89144 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89145 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 89204 Query: 301 actgga-catctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 359 |||||| ||||||||||||||||||||||||||| ||||| || ||||||||||||||| Sbjct: 89205 actggaccatctaggggtaaagcactgtttcggtacgggccacgagagcggtaccaaatc 89264 Query: 360 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 419 ||||||||||||||||||||||| | ||||| | || ||||| | |||| |||||| Sbjct: 89265 gaggcaaactctgaatactagat-taccccaata--aaagggggtaagggtcaaccagtg 89321 Query: 420 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 479 |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 89322 agacgatgggggataagcttcatcgtcgagaggggaacagcccagatcaccagctaaggc 89381 Query: 480 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 539 |||||||||||||||||||||| ||||| || | ||||||||||||||||||||||||| Sbjct: 89382 ccctaaatgaccgctcagtgatgaaggaagtacgagtgcaaagacagccaggaggtttgc 89441 Query: 540 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgct 599 ||||||||||||| |||| |||||||||||||||||||||||||||||||| | ||||| Sbjct: 89442 ctagaagcagccaaccttgaaagagtgcgtaatagctcactgatcgagcgctcgtgcgcc 89501 Query: 600 gaagat 605 |||||| Sbjct: 89502 gaagat 89507
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 801 bits (404), Expect = 0.0 Identities = 546/591 (92%), Gaps = 7/591 (1%) Strand = Plus / Minus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| |||| |||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 127879 tctctgaccgcatgcctgttgaggaatgagccggcgactcataggcagtggcctggttaa 127820 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||| ||||||| |||||||||||||||||||||| |||||| |||||||||| Sbjct: 127819 gggaac-----ccaccgg-agccgtagcgaaagcgagtcttcctagggcaattgtcactg 127766 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 || ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 127765 ctcatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtaaaactaa 127706 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 127705 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 127646 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127645 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 127586 Query: 301 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 359 || |||| | |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 127585 accggactacctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 127526 Query: 360 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 419 ||||||||||||||||||||| |||||||| || ||| ||| | |||| |||||| Sbjct: 127525 gaggcaaactctgaatactaggtatgacccccgaagaacggggaaaagggtcaaccagtg 127466 Query: 420 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 479 ||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||| Sbjct: 127465 agacgatgggggataagcttcattgtcgagaggggaacagcccagatcaccagctaaggc 127406 Query: 480 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 539 ||||||||||| |||||||| |||||||||| || ||||||||||||||||||||||||| Sbjct: 127405 ccctaaatgactgctcagtggtaaaggaggtaggagtgcaaagacagccaggaggtttgc 127346 Query: 540 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 590 |||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct: 127345 ctagaagcagccacccttaaaagagtgcgtaatagctcactgatcaagcgc 127295 Score = 801 bits (404), Expect = 0.0 Identities = 546/591 (92%), Gaps = 7/591 (1%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| |||| |||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 95568 tctctgaccgcatgcctgttgaggaatgagccggcgactcataggcagtggcctggttaa 95627 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||| ||||||| |||||||||||||||||||||| |||||| |||||||||| Sbjct: 95628 gggaac-----ccaccgg-agccgtagcgaaagcgagtcttcctagggcaattgtcactg 95681 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 || ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 95682 ctcatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtaaaactaa 95741 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 95742 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 95801 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95802 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 95861 Query: 301 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 359 || |||| | |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 95862 accggactacctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 95921 Query: 360 gaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 419 ||||||||||||||||||||| |||||||| || ||| ||| | |||| |||||| Sbjct: 95922 gaggcaaactctgaatactaggtatgacccccgaagaacggggaaaagggtcaaccagtg 95981 Query: 420 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 479 ||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||| Sbjct: 95982 agacgatgggggataagcttcattgtcgagaggggaacagcccagatcaccagctaaggc 96041 Query: 480 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 539 ||||||||||| |||||||| |||||||||| || ||||||||||||||||||||||||| Sbjct: 96042 ccctaaatgactgctcagtggtaaaggaggtaggagtgcaaagacagccaggaggtttgc 96101 Query: 540 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 590 |||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct: 96102 ctagaagcagccacccttaaaagagtgcgtaatagctcactgatcaagcgc 96152
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 793 bits (400), Expect = 0.0 Identities = 415/419 (99%), Gaps = 1/419 (0%) Strand = Plus / Minus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 418 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 359 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 ||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 358 gggaatggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 300 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 299 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 240 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 239 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 180 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 179 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 120 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 60 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 419 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 59 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtg 1
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 793 bits (400), Expect = 0.0 Identities = 558/607 (91%), Gaps = 8/607 (1%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 566 tctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaa 625 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||| ||||||| ||||||||||||||| |||||| | |||| |||||||||| Sbjct: 626 gggaac-----ccaccgg-agccgtagcgaaagcaagtcttcctggggcaattgtcactg 679 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 680 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 739 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 740 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 799 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 800 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 859 Query: 301 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 359 ||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 860 actagactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 919 Query: 360 gaggcaaactctgaatactagatatgacccaaaaataacag-gggtcaaggtcggccagt 418 ||||||||||||||||||| |||| ||| | ||||| || | || | |||| ||||| Sbjct: 920 gaggcaaactctgaatactggataggactccctaataatagagagtaagggtcaaccagt 979 Query: 419 gagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaagg 478 ||||| ||||||||||||||||| |||||||||| |||||||| ||||||| ||||||| Sbjct: 980 gagacagtgggggataagcttcattgtcgagaggggaacagcccagatcaccggctaagg 1039 Query: 479 cccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttg 538 |||||||||||||||| |||| |||||||||| || |||||||||||||||||||||||| Sbjct: 1040 cccctaaatgaccgctaagtggtaaaggaggtaggagtgcaaagacagccaggaggtttg 1099 Query: 539 cctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 598 |||||||||||||| |||| |||||||||||||||||||||||||| ||||| ||||||| Sbjct: 1100 cctagaagcagccatccttgaaagagtgcgtaatagctcactgatcaagcgctcttgcgc 1159 Query: 599 tgaagat 605 |||||| Sbjct: 1160 cgaagat 1166
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 728 bits (367), Expect = 0.0 Identities = 421/438 (96%), Gaps = 6/438 (1%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46818 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 46877 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 46878 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 46931 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 46932 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 46991 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46992 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 47051 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47052 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 47111 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 47112 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcga 47171 Query: 362 ggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgag 421 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 47172 ggcaaactctgaatactagatatgacctccaaataacaggggtcaaggtcggccagtgag 47231 Query: 422 acgatgggggataagctt 439 |||||||||||||||||| Sbjct: 47232 acgatgggggataagctt 47249
>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome Length = 366924 Score = 724 bits (365), Expect = 0.0 Identities = 432/452 (95%), Gaps = 7/452 (1%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364743 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 364802 Query: 62 ggaacggaacccaccggnagccgtagcgaaag-cgagtcttaatagggcgattgtcactg 120 ||||| ||||||| |||||||||||||| |||||||| ||||||| |||||||||| Sbjct: 364803 ggaac-----ccaccgg-agccgtagcgaaaggcgagtcttcatagggcaattgtcactg 364856 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| Sbjct: 364857 cttatggacccgaacctgggtgatctatctatgaccaggatgaagcttgggtgaaactaa 364916 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 364917 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 364976 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364977 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 365036 Query: 301 actggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 365037 actggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcg 365096 Query: 361 aggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtga 420 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 365097 aggcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggccagtga 365156 Query: 421 gacgatgggggataagcttcatcgtcgagagg 452 |||| ||||||||||||||||||||||||||| Sbjct: 365157 gacggtgggggataagcttcatcgtcgagagg 365188 Score = 198 bits (100), Expect = 1e-47 Identities = 128/136 (94%), Gaps = 1/136 (0%) Strand = Plus / Minus Query: 447 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 506 |||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||| Sbjct: 129347 gagagggaaacagcccggatcaccagctaaggcccccaaatggccgctcagttataaagg 129288 Query: 507 aggtgggggtgcaaagacagcc-aggaggtttgcctagaagcagccaccctttaaagagt 565 |||| |||||||| |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 129287 aggtaggggtgcagagacagccaaggaggtttgcctagaagcagccacccttgaaagagc 129228 Query: 566 gcgtaatagctcactg 581 |||||||||||||||| Sbjct: 129227 gcgtaatagctcactg 129212 Score = 48.1 bits (24), Expect = 0.034 Identities = 51/60 (85%) Strand = Plus / Minus Query: 522 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 581 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 10906 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 10847 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 444 gtcgagagggaaacagcccggatc 467 ||||||||||||||||||| |||| Sbjct: 10984 gtcgagagggaaacagcccagatc 10961
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 690 bits (348), Expect = 0.0 Identities = 540/599 (90%), Gaps = 9/599 (1%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| | |||| ||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct: 566 ctctgactgcgttcctgttgaagaatgagccggcgactcataagtagtggcttggttaag 625 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 || ||||| ||||| || | |||||||||| |||||| ||||||| | ||||| ||| Sbjct: 626 gg----gaacc-accgg-agtcatagcgaaagcaagtcttcatagggcaaatgtcattgc 679 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 |||||||||||||| ||||||||||| ||||||||| |||||| |||| |||||||||| Sbjct: 680 ttatggacccgaacttgggtgatctaaccatgaccaagatgaaatttggttgaaactaag 739 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 740 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 799 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 ||||| || |||||| |||||| ||||||||||||||||||||| |||||||| |||| | Sbjct: 800 tgccaatcaaacccaaagctagttggttctccccgaaatgcgtttaggcgcagaagtt-a 858 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 | ||||||||||||||||||||||||||||| |||| ||| |||| ||||||||| || Sbjct: 859 ccagacatctaggggtaaagcactgtttcggttcgggtcgcgagagccgtaccaaattga 918 Query: 362 ggcaaactctgaatactagatatgacc--caaaaataacaggggtcaaggtcggccagtg 419 |||||||| |||||||||||||||||| |||||||||||||| | ||||| | |||||| Sbjct: 919 ggcaaactatgaatactagatatgacctccaaaaataacagggataaaggtggaccagtg 978 Query: 420 agacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggc 479 |||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 979 agaccatgggggataagcttcatcgtcgagaggggaacagcccagatcaccagctaaggc 1038 Query: 480 ccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgc 539 ||||||||||||||| ||| ||||||||||| |||||||| ||||| ||||||||||||| Sbjct: 1039 ccctaaatgaccgctaagttataaaggaggtaggggtgcatagacaaccaggaggtttgc 1098 Query: 540 ctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 598 ||||||| ||||||||||||||||||||||||||||| ||||||||||||| ||||||| Sbjct: 1099 ctagaagaagccaccctttaaagagtgcgtaatagctaactgatcgagcgctcttgcgc 1157
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 656 bits (331), Expect = 0.0 Identities = 530/593 (89%), Gaps = 9/593 (1%) Strand = Plus / Minus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| |||||||||||||||||||||||||||||||| |||||| | ||| ||||||| Sbjct: 138706 tctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcggcggcctggttaa 138647 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||| ||||||| |||||||||||||||||||||| ||||| | |||| ||| Sbjct: 138646 gggaac-----ccaccgg-agccgtagcgaaagcgagtcttcccagggcaactgtcgctg 138593 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| | Sbjct: 138592 cttatggacccgaacccgggtgatctatccatgaccaggatgaagcttggatagaaccag 138533 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 | ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| Sbjct: 138532 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagtcgtggttaggggtgaa 138473 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 138472 atgccactcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcggttg 138413 Query: 301 act-ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 359 ||| || | || | |||||||||||||| |||||||||||||| |||| |||||||| | Sbjct: 138412 actaggctacctggaggtaaagcactgttacggtgcgggctgcgagagcagtaccaaacc 138353 Query: 360 gaggcaaactctgaatactagatatgacccaaaaataaca--ggggtcaaggtcggccag 417 ||||||||||||||||||| | |||| ||| | | | ||| |||| |||||||||||| Sbjct: 138352 gaggcaaactctgaatactgggtatggccccagagtcacacgagggtgaaggtcggccag 138293 Query: 418 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 477 ||||||| |||||||||||||||| ||||||||||| |||||||| |||||||||||||| Sbjct: 138292 tgagacggtgggggataagcttcaccgtcgagaggggaacagcccagatcaccagctaag 138233 Query: 478 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 537 |||||| ||||||||||||||| | |||||||| || |||||||||||||| |||||||| Sbjct: 138232 gcccctgaatgaccgctcagtggtgaaggaggtaggagtgcaaagacagccgggaggttt 138173 Query: 538 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 590 ||| |||||||||||||||| |||||||||||| ||||||||||||| ||||| Sbjct: 138172 gcccagaagcagccacccttgaaagagtgcgtagtagctcactgatcaagcgc 138120 Score = 656 bits (331), Expect = 0.0 Identities = 530/593 (89%), Gaps = 9/593 (1%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| |||||||||||||||||||||||||||||||| |||||| | ||| ||||||| Sbjct: 83171 tctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcggcggcctggttaa 83230 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||| ||||||| |||||||||||||||||||||| ||||| | |||| ||| Sbjct: 83231 gggaac-----ccaccgg-agccgtagcgaaagcgagtcttcccagggcaactgtcgctg 83284 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| | Sbjct: 83285 cttatggacccgaacccgggtgatctatccatgaccaggatgaagcttggatagaaccag 83344 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 | ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| Sbjct: 83345 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagtcgtggttaggggtgaa 83404 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 83405 atgccactcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcggttg 83464 Query: 301 act-ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 359 ||| || | || | |||||||||||||| |||||||||||||| |||| |||||||| | Sbjct: 83465 actaggctacctggaggtaaagcactgttacggtgcgggctgcgagagcagtaccaaacc 83524 Query: 360 gaggcaaactctgaatactagatatgacccaaaaataaca--ggggtcaaggtcggccag 417 ||||||||||||||||||| | |||| ||| | | | ||| |||| |||||||||||| Sbjct: 83525 gaggcaaactctgaatactgggtatggccccagagtcacacgagggtgaaggtcggccag 83584 Query: 418 tgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaag 477 ||||||| |||||||||||||||| ||||||||||| |||||||| |||||||||||||| Sbjct: 83585 tgagacggtgggggataagcttcaccgtcgagaggggaacagcccagatcaccagctaag 83644 Query: 478 gcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggttt 537 |||||| ||||||||||||||| | |||||||| || |||||||||||||| |||||||| Sbjct: 83645 gcccctgaatgaccgctcagtggtgaaggaggtaggagtgcaaagacagccgggaggttt 83704 Query: 538 gcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 590 ||| |||||||||||||||| |||||||||||| ||||||||||||| ||||| Sbjct: 83705 gcccagaagcagccacccttgaaagagtgcgtagtagctcactgatcaagcgc 83757
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 603 bits (304), Expect = e-169 Identities = 364/383 (95%), Gaps = 6/383 (1%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4791 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 4850 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 |||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 4851 ggaaa-----ccaccgg-agccgtagcgaaagcgagtcttcatagggctattgtcactgc 4904 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 4905 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttaggtgaaactaag 4964 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 4965 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaa 5024 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5025 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 5084 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 ||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||| Sbjct: 5085 ctggacatctaggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcga 5144 Query: 362 ggcaaactctgaatactagatat 384 ||||||||||||||||||||||| Sbjct: 5145 ggcaaactctgaatactagatat 5167 Score = 327 bits (165), Expect = 2e-86 Identities = 189/197 (95%) Strand = Plus / Plus Query: 409 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 5182 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 5241 Query: 469 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 528 ||||||||||||||||||||| |||||||||||||||||||| || ||||| |||||||| Sbjct: 5242 ccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgcagagacagcc 5301 Query: 529 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 588 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 5302 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 5361 Query: 589 gcccttgcgctgaagat 605 || ||||||| |||||| Sbjct: 5362 gctcttgcgccgaagat 5378
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 603 bits (304), Expect = e-169 Identities = 364/383 (95%), Gaps = 6/383 (1%) Strand = Plus / Minus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23134 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 23075 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 |||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 23074 ggaaa-----ccaccgg-agccgtagcgaaagcgagtcttcatagggctattgtcactgc 23021 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct: 23020 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttaggtgaaactaag 22961 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 22960 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaa 22901 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22900 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 22841 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 ||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||| Sbjct: 22840 ctggacatctaggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcga 22781 Query: 362 ggcaaactctgaatactagatat 384 ||||||||||||||||||||||| Sbjct: 22780 ggcaaactctgaatactagatat 22758 Score = 327 bits (165), Expect = 2e-86 Identities = 189/197 (95%) Strand = Plus / Minus Query: 409 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 22743 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 22684 Query: 469 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 528 ||||||||||||||||||||| |||||||||||||||||||| || ||||| |||||||| Sbjct: 22683 ccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgcagagacagcc 22624 Query: 529 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 588 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 22623 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 22564 Query: 589 gcccttgcgctgaagat 605 || ||||||| |||||| Sbjct: 22563 gctcttgcgccgaagat 22547
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 597 bits (301), Expect = e-167 Identities = 367/388 (94%), Gaps = 6/388 (1%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5059 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 5118 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 |||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 5119 ggaaa-----ccaccgg-agccgtagcgaaagcgagtcttcatagggctattgtcactgc 5172 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 |||||||||||||||||||||||||||||||||||||||||||| || | |||||||||| Sbjct: 5173 ttatggacccgaacctgggtgatctatccatgaccaggatgaagtttaggtgaaactaag 5232 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 5233 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaa 5292 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5293 tgccaatcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 5352 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 ||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||| Sbjct: 5353 ctggacatctaggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcga 5412 Query: 362 ggcaaactctgaatactagatatgaccc 389 |||||||||||||||||||||||||||| Sbjct: 5413 ggcaaactctgaatactagatatgaccc 5440 Score = 329 bits (166), Expect = 6e-87 Identities = 197/206 (95%), Gaps = 1/206 (0%) Strand = Plus / Plus Query: 401 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 459 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 460 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 519 ||| |||||||||||||||||||||||||| |||||||||||||||||||| || ||||| Sbjct: 5505 cccagatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgca 5564 Query: 520 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 579 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 5565 gagacagccaggaggtttgcctagaagcagccacccttcaaagagtgcgtaatagctcac 5624 Query: 580 tgatcgagcgcccttgcgctgaagat 605 ||||||||||| ||||||| |||||| Sbjct: 5625 tgatcgagcgctcttgcgccgaagat 5650
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 597 bits (301), Expect = e-167 Identities = 367/388 (94%), Gaps = 6/388 (1%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5059 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 5118 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 |||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 5119 ggaaa-----ccaccgg-agccgtagcgaaagcgagtcttcatagggctattgtcactgc 5172 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 |||||||||||||||||||||||||||||||||||||||||||| || | |||||||||| Sbjct: 5173 ttatggacccgaacctgggtgatctatccatgaccaggatgaagtttaggtgaaactaag 5232 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 5233 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaa 5292 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5293 tgccaatcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 5352 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 ||||||||||||||||||||||||||||||| |||||| ||| ||||||||||||||||| Sbjct: 5353 ctggacatctaggggtaaagcactgtttcggcgcgggccgcgagagcggtaccaaatcga 5412 Query: 362 ggcaaactctgaatactagatatgaccc 389 |||||||||||||||||||||||||||| Sbjct: 5413 ggcaaactctgaatactagatatgaccc 5440 Score = 329 bits (166), Expect = 6e-87 Identities = 197/206 (95%), Gaps = 1/206 (0%) Strand = Plus / Plus Query: 401 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 459 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 460 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 519 ||| |||||||||||||||||||||||||| |||||||||||||||||||| || ||||| Sbjct: 5505 cccagatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgca 5564 Query: 520 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 579 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 5565 gagacagccaggaggtttgcctagaagcagccacccttcaaagagtgcgtaatagctcac 5624 Query: 580 tgatcgagcgcccttgcgctgaagat 605 ||||||||||| ||||||| |||||| Sbjct: 5625 tgatcgagcgctcttgcgccgaagat 5650
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 591 bits (298), Expect = e-165 Identities = 362/381 (95%), Gaps = 7/381 (1%) Strand = Plus / Minus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 115649 tctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaa 115590 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||| | ||||||| |||||||||||||||||||||| |||||| |||||||||| Sbjct: 115589 gggagc-----ccaccgg-agccgtagcgaaagcgagtcttcttagggcaattgtcactg 115536 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 115535 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 115476 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 115475 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 115416 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115415 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 115356 Query: 301 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 359 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 115355 actggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 115296 Query: 360 gaggcaaactctgaatactag 380 ||||||||||||||||||||| Sbjct: 115295 gaggcaaactctgaatactag 115275 Score = 591 bits (298), Expect = e-165 Identities = 362/381 (95%), Gaps = 7/381 (1%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 86471 tctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaa 86530 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||| | ||||||| |||||||||||||||||||||| |||||| |||||||||| Sbjct: 86531 gggagc-----ccaccgg-agccgtagcgaaagcgagtcttcttagggcaattgtcactg 86584 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 86585 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 86644 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 86645 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 86704 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86705 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 86764 Query: 301 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 359 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 86765 actggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 86824 Query: 360 gaggcaaactctgaatactag 380 ||||||||||||||||||||| Sbjct: 86825 gaggcaaactctgaatactag 86845 Score = 289 bits (146), Expect = 5e-75 Identities = 185/198 (93%) Strand = Plus / Minus Query: 408 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 467 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 115246 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 115187 Query: 468 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 527 |||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||| Sbjct: 115186 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagc 115127 Query: 528 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 587 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 115126 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 115067 Query: 588 cgcccttgcgctgaagat 605 ||| ||||||| |||||| Sbjct: 115066 cgctcttgcgccgaagat 115049 Score = 289 bits (146), Expect = 5e-75 Identities = 185/198 (93%) Strand = Plus / Plus Query: 408 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 467 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 86874 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 86933 Query: 468 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 527 |||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||| Sbjct: 86934 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagc 86993 Query: 528 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 587 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 86994 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 87053 Query: 588 cgcccttgcgctgaagat 605 ||| ||||||| |||||| Sbjct: 87054 cgctcttgcgccgaagat 87071
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 585 bits (295), Expect = e-164 Identities = 365/386 (94%), Gaps = 7/386 (1%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 4451 tctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaa 4510 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 ||||| |||||| |||||||||||||||||||||| |||||| |||||||||| Sbjct: 4511 gggaatt-----caccgg-agccgtagcgaaagcgagtcttcctagggcaattgtcactg 4564 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 4565 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 4624 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 4625 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 4684 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4685 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 4744 Query: 301 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 359 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 4745 actggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 4804 Query: 360 gaggcaaactctgaatactagatatg 385 ||||||||||||||||||||| |||| Sbjct: 4805 gaggcaaactctgaatactaggtatg 4830 Score = 297 bits (150), Expect = 2e-77 Identities = 186/198 (93%) Strand = Plus / Plus Query: 408 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 467 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 4858 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 4917 Query: 468 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 527 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 4918 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 4977 Query: 528 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 587 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 4978 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 5037 Query: 588 cgcccttgcgctgaagat 605 ||| ||||||| |||||| Sbjct: 5038 cgctcttgcgccgaagat 5055
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 585 bits (295), Expect = e-164 Identities = 365/386 (94%), Gaps = 7/386 (1%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 561 tctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaa 620 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 ||||| |||||| |||||||||||||||||||||| |||||| |||||||||| Sbjct: 621 gggaatt-----caccgg-agccgtagcgaaagcgagtcttcctagggcaattgtcactg 674 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 675 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 734 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 735 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 794 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 795 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 854 Query: 301 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 359 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 855 actggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 914 Query: 360 gaggcaaactctgaatactagatatg 385 ||||||||||||||||||||| |||| Sbjct: 915 gaggcaaactctgaatactaggtatg 940 Score = 297 bits (150), Expect = 2e-77 Identities = 186/198 (93%) Strand = Plus / Plus Query: 408 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 467 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 468 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 527 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1028 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 1087 Query: 528 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 587 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 1088 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 1147 Query: 588 cgcccttgcgctgaagat 605 ||| ||||||| |||||| Sbjct: 1148 cgctcttgcgccgaagat 1165
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 585 bits (295), Expect = e-164 Identities = 365/386 (94%), Gaps = 7/386 (1%) Strand = Plus / Minus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 150684 tctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaa 150625 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 ||||| |||||| |||||||||||||||||||||| |||||| |||||||||| Sbjct: 150624 gggaatt-----caccgg-agccgtagcgaaagcgagtcttcctagggcaattgtcactg 150571 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 150570 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 150511 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 150510 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 150451 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150450 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 150391 Query: 301 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 359 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 150390 actggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 150331 Query: 360 gaggcaaactctgaatactagatatg 385 ||||||||||||||||||||| |||| Sbjct: 150330 gaggcaaactctgaatactaggtatg 150305 Score = 585 bits (295), Expect = e-164 Identities = 365/386 (94%), Gaps = 7/386 (1%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 117982 tctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaa 118041 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 ||||| |||||| |||||||||||||||||||||| |||||| |||||||||| Sbjct: 118042 gggaatt-----caccgg-agccgtagcgaaagcgagtcttcctagggcaattgtcactg 118095 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 118096 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 118155 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 118156 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 118215 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118216 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 118275 Query: 301 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 359 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 118276 actggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 118335 Query: 360 gaggcaaactctgaatactagatatg 385 ||||||||||||||||||||| |||| Sbjct: 118336 gaggcaaactctgaatactaggtatg 118361 Score = 297 bits (150), Expect = 2e-77 Identities = 186/198 (93%) Strand = Plus / Minus Query: 408 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 467 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 150277 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 150218 Query: 468 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 527 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 150217 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 150158 Query: 528 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 587 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 150157 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 150098 Query: 588 cgcccttgcgctgaagat 605 ||| ||||||| |||||| Sbjct: 150097 cgctcttgcgccgaagat 150080 Score = 297 bits (150), Expect = 2e-77 Identities = 186/198 (93%) Strand = Plus / Plus Query: 408 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 467 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 118389 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 118448 Query: 468 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 527 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 118449 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 118508 Query: 528 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 587 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 118509 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 118568 Query: 588 cgcccttgcgctgaagat 605 ||| ||||||| |||||| Sbjct: 118569 cgctcttgcgccgaagat 118586
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 585 bits (295), Expect = e-164 Identities = 365/386 (94%), Gaps = 7/386 (1%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 561 tctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaa 620 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 ||||| |||||| |||||||||||||||||||||| |||||| |||||||||| Sbjct: 621 gggaatt-----caccgg-agccgtagcgaaagcgagtcttcctagggcaattgtcactg 674 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 675 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 734 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 735 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 794 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 795 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 854 Query: 301 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 359 ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 855 actggactatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatc 914 Query: 360 gaggcaaactctgaatactagatatg 385 ||||||||||||||||||||| |||| Sbjct: 915 gaggcaaactctgaatactaggtatg 940 Score = 297 bits (150), Expect = 2e-77 Identities = 186/198 (93%) Strand = Plus / Plus Query: 408 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 467 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 468 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 527 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1028 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 1087 Query: 528 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 587 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 1088 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 1147 Query: 588 cgcccttgcgctgaagat 605 ||| ||||||| |||||| Sbjct: 1148 cgctcttgcgccgaagat 1165
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 581 bits (293), Expect = e-162 Identities = 405/441 (91%), Gaps = 1/441 (0%) Strand = Plus / Minus Query: 156 caggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaagaatcag 215 ||||||| ||||||| |||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 3111 caggatgcagcttgggtgaaactaagtggaggtccgaactgactgatgttgaagaatcag 3052 Query: 216 cggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggttctcccc 275 |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct: 3051 cggatgagttgtggttaggggtgaaatgccactcaaacc-agagctagctggttctccct 2993 Query: 276 gaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc 335 ||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2992 gaaatgcattgaagcgcagcagttgactggacatctaggagtaaagcactgtttcggtgc 2933 Query: 336 gggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaat 395 |||| | |||| ||||||||| ||||||||||||||||| |||||| || | ||||| Sbjct: 2932 gggcaatgagagcagtaccaaattgaggcaaactctgaatattagatacgatctcaaaat 2873 Query: 396 aacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaa 455 ||| |||||||||||||| |||||||||| | ||||||||||||||||||||||||||| Sbjct: 2872 cacaagggtcaaggtcggcgagtgagacgacgagggataagcttcatcgtcgagagggaa 2813 Query: 456 acagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggggg 515 ||| || |||||||||||||||||||||||||||| ||||||||||||||||||| |||| Sbjct: 2812 acaacctggatcaccagctaaggcccctaaatgactgctcagtgataaaggaggtagggg 2753 Query: 516 tgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagc 575 ||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||| Sbjct: 2752 tgcaaagacagccaggaggtttgcctagaagcaaccacccttgaaaaagtgcgtaatagc 2693 Query: 576 tcactgatcgagcgcccttgc 596 ||||| ||||||||| ||||| Sbjct: 2692 tcactaatcgagcgcacttgc 2672 Score = 137 bits (69), Expect = 5e-29 Identities = 120/136 (88%), Gaps = 6/136 (4%) Strand = Plus / Minus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||| ||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3249 ctctgaccgcgtacctattgaagaatgagccgacgactcataggcagtggcttggttaag 3190 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 |||||||||||| |||| ||||||||||||||| ||| |||| ||| ||||||| Sbjct: 3189 -----ggaacccaccgg-agccatagcgaaagcgagtcagaatggggcaattctcactgc 3136 Query: 122 ttatggacccgaacct 137 |||||||||||||||| Sbjct: 3135 ttatggacccgaacct 3120
>gb|AF263517.1|AF263517 Vitis vinifera 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 433 Score = 569 bits (287), Expect = e-159 Identities = 335/350 (95%), Gaps = 6/350 (1%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 90 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 149 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 150 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 203 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 204 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 263 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 264 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 323 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 324 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcggttga 383 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggt 351 |||||||||||||||||||||||||||||||||||||| ||| ||||||| Sbjct: 384 ctggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggt 433
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 567 bits (286), Expect = e-158 Identities = 362/384 (94%), Gaps = 4/384 (1%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 545 tctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaa 604 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 ||||| | | ||||||| |||| ||||||||||||||||| ||||| |||||||||| Sbjct: 605 gggaaagaa--ccaccgg-agccatagcgaaagcgagtcttcccagggcaattgtcactg 661 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 662 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 721 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 722 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaa 781 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 782 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcaacagttg 841 Query: 301 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 359 ||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||||| Sbjct: 842 actggactatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatc 901 Query: 360 gaggcaaactctgaatactagata 383 ||||||||||||||||||| |||| Sbjct: 902 gaggcaaactctgaatactggata 925 Score = 278 bits (140), Expect = 2e-71 Identities = 179/192 (93%) Strand = Plus / Plus Query: 414 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 473 |||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||| Sbjct: 955 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcaccagc 1014 Query: 474 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 533 ||||||||||||||||||||| |||| | |||||||| |||||||||||||||||||||| Sbjct: 1015 taaggcccctaaatgaccgctaagtggtgaaggaggtaggggtgcaaagacagccaggag 1074 Query: 534 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 593 ||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| || Sbjct: 1075 gtttgcctagaagcagccatccttgaaagagtgcgtaatagctcactgatcaagcgctct 1134 Query: 594 tgcgctgaagat 605 ||||| |||||| Sbjct: 1135 tgcgccgaagat 1146
>gb|AF143267.1| Vitis vinifera 23S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 425 Score = 549 bits (277), Expect = e-153 Identities = 322/336 (95%), Gaps = 6/336 (1%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 145 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 146 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 199 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 200 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 259 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 260 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 319 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| Sbjct: 320 tgccactcgaacccagagctagctggctctccccgaaatgcgttgaggcgcagcggttga 379 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgg 337 |||||||||||||||||||||||||||||||||||| Sbjct: 380 ctggacatctaggggtaaagcactgtttcggtgcgg 415
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 519 bits (262), Expect = e-144 Identities = 277/281 (98%), Gaps = 1/281 (0%) Strand = Plus / Minus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75139 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 75080 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 ||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 75079 gggaatggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 75021 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75020 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 74961 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74960 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 74901 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatg 281 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 74900 atgccactcgaacccagagctagctggttctccccgaaatg 74860 Score = 48.1 bits (24), Expect = 0.034 Identities = 51/60 (85%) Strand = Plus / Plus Query: 522 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 581 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 401437 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 401496 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 444 gtcgagagggaaacagcccggatc 467 ||||||||||||||||||| |||| Sbjct: 401359 gtcgagagggaaacagcccagatc 401382
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 519 bits (262), Expect = e-144 Identities = 277/281 (98%), Gaps = 1/281 (0%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382399 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 382458 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 ||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 382459 gggaatggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 382517 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382518 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 382577 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382578 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 382637 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatg 281 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 382638 atgccactcgaacccagagctagctggttctccccgaaatg 382678 Score = 48.1 bits (24), Expect = 0.034 Identities = 51/60 (85%) Strand = Plus / Minus Query: 522 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 581 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 282982 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 282923 Score = 48.1 bits (24), Expect = 0.034 Identities = 51/60 (85%) Strand = Plus / Minus Query: 522 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 581 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 154290 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 154231 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 444 gtcgagagggaaacagcccggatc 467 ||||||||||||||||||| |||| Sbjct: 283060 gtcgagagggaaacagcccagatc 283037 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 444 gtcgagagggaaacagcccggatc 467 ||||||||||||||||||| |||| Sbjct: 154368 gtcgagagggaaacagcccagatc 154345
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 519 bits (262), Expect = e-144 Identities = 277/281 (98%), Gaps = 1/281 (0%) Strand = Plus / Minus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113230 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 113171 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 ||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 113170 gggaatggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 113112 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113111 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 113052 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113051 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 112992 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatg 281 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 112991 atgccactcgaacccagagctagctggttctccccgaaatg 112951 Score = 48.1 bits (24), Expect = 0.034 Identities = 51/60 (85%) Strand = Plus / Plus Query: 522 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 581 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 294071 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 294130 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 444 gtcgagagggaaacagcccggatc 467 ||||||||||||||||||| |||| Sbjct: 293993 gtcgagagggaaacagcccagatc 294016
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 519 bits (262), Expect = e-144 Identities = 280/285 (98%), Gaps = 1/285 (0%) Strand = Plus / Minus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367912 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 367853 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 ||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 367852 gggaatggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 367794 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367793 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 367734 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367733 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 367674 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgtt 285 |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 367673 atgccactcgaacccagagctagctggttctccccgaaattcgtt 367629 Score = 519 bits (262), Expect = e-144 Identities = 280/285 (98%), Gaps = 1/285 (0%) Strand = Plus / Minus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184517 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 184458 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 ||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 184457 gggaatggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 184399 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184398 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 184339 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184338 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 184279 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgtt 285 |||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 184278 atgccactcgaacccagagctagctggttctccccgaaattcgtt 184234 Score = 48.1 bits (24), Expect = 0.034 Identities = 51/60 (85%) Strand = Plus / Plus Query: 522 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 581 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 266906 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 266965 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 444 gtcgagagggaaacagcccggatc 467 ||||||||||||||||||| |||| Sbjct: 266828 gtcgagagggaaacagcccagatc 266851
>gb|DQ078770.1| Zea mays clone Zmcoi6.13 cold-inducible unknown mRNA Length = 519 Score = 504 bits (254), Expect = e-139 Identities = 254/254 (100%) Strand = Plus / Minus Query: 352 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 411 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 519 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 460 Query: 412 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 459 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 400 Query: 472 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 531 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 399 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 340 Query: 532 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 591 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 339 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 280 Query: 592 cttgcgctgaagat 605 |||||||||||||| Sbjct: 279 cttgcgctgaagat 266
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 500 bits (252), Expect = e-138 Identities = 349/376 (92%), Gaps = 4/376 (1%) Strand = Plus / Plus Query: 8 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacg 67 |||||||||||||||||||||||||||||||| ||||| ||||| ||||||||| | Sbjct: 144488 ccgcgtgcctgttgaagaatgagccggcgacttgtaggcggtggcccggttaagggggag 144547 Query: 68 gaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 127 ||||| |||| |||||||||||||||||||||| | |||| |||||||| |||||| Sbjct: 144548 -aaccc-ccgg-agccgtagcgaaagcgagtcttgctggggcaattgtcaccgcttataa 144604 Query: 128 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 187 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 144605 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 144664 Query: 188 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 247 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 144665 tccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccac 144724 Query: 248 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga- 306 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 144725 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactagac 144784 Query: 307 catctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 366 |||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||| Sbjct: 144785 catctaggggtaaagcaccgttccggtgcgggctgcgagagcggtaccaaatcgaggcaa 144844 Query: 367 actctgaatactagat 382 |||||||||||||||| Sbjct: 144845 actctgaatactagat 144860 Score = 500 bits (252), Expect = e-138 Identities = 349/376 (92%), Gaps = 4/376 (1%) Strand = Plus / Minus Query: 8 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacg 67 |||||||||||||||||||||||||||||||| ||||| ||||| ||||||||| | Sbjct: 88363 ccgcgtgcctgttgaagaatgagccggcgacttgtaggcggtggcccggttaagggggag 88304 Query: 68 gaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 127 ||||| |||| |||||||||||||||||||||| | |||| |||||||| |||||| Sbjct: 88303 -aaccc-ccgg-agccgtagcgaaagcgagtcttgctggggcaattgtcaccgcttataa 88247 Query: 128 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 187 ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| Sbjct: 88246 acccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggagg 88187 Query: 188 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 247 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 88186 tccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccac 88127 Query: 248 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga- 306 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 88126 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactagac 88067 Query: 307 catctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 366 |||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||| Sbjct: 88066 catctaggggtaaagcaccgttccggtgcgggctgcgagagcggtaccaaatcgaggcaa 88007 Query: 367 actctgaatactagat 382 |||||||||||||||| Sbjct: 88006 actctgaatactagat 87991 Score = 293 bits (148), Expect = 3e-76 Identities = 181/192 (94%) Strand = Plus / Plus Query: 414 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 473 |||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 144899 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagc 144958 Query: 474 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 533 |||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||| Sbjct: 144959 taaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggag 145018 Query: 534 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 593 |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| || Sbjct: 145019 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctct 145078 Query: 594 tgcgctgaagat 605 ||||| |||||| Sbjct: 145079 tgcgccgaagat 145090 Score = 293 bits (148), Expect = 3e-76 Identities = 181/192 (94%) Strand = Plus / Minus Query: 414 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 473 |||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 87952 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagc 87893 Query: 474 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 533 |||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||| Sbjct: 87892 taaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggag 87833 Query: 534 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 593 |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| || Sbjct: 87832 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctct 87773 Query: 594 tgcgctgaagat 605 ||||| |||||| Sbjct: 87772 tgcgccgaagat 87761
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 500 bits (252), Expect = e-138 Identities = 357/387 (92%), Gaps = 9/387 (2%) Strand = Plus / Minus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||| Sbjct: 5986 tctctgaccgcgtgccttttgaagaatgagccggcgacttataggcagtggcttggttaa 5927 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 ||| || ||||||| ||||||||||| |||||||||| ||||||| |||||||||| Sbjct: 5926 gggcac-----ccaccgg-agccgtagcgagagcgagtcttcatagggcaattgtcactg 5873 Query: 121 ctt-atggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaacta 179 ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 5872 ctttatggacccgaacctgggtgatctatccatgaccaggatgaagct-ggatgaaacta 5814 Query: 180 agcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtga 239 || |||||||||||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 5813 agtagaggtccgaaccgactgatgttgcaaaatcagcggatgagttgtggttaggggtga 5754 Query: 240 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5753 aatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagtt 5694 Query: 300 gactgga-catctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 358 ||||||| | ||||||||||||||||||||||||| ||| | | |||||||| | || Sbjct: 5693 gactggaccgtctaggggtaaagcactgtttcggtataggccgtgtaagcggtacgacat 5634 Query: 359 cgaggcaaactctgaatactagatatg 385 ||||||||||| ||||||||||||||| Sbjct: 5633 cgaggcaaactatgaatactagatatg 5607 Score = 258 bits (130), Expect = 2e-65 Identities = 181/198 (91%) Strand = Plus / Minus Query: 408 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 467 |||| ||||||||||||||| |||||||||||||||||| |||||| |||||||| ||| Sbjct: 5602 ggtcagccagtgagacgatgagggataagcttcatcgtcaagaggggaacagcccagatt 5543 Query: 468 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 527 ||||| |||||||||||||||||||||||||||| ||||| || | ||||||||||||| Sbjct: 5542 accagataaggcccctaaatgaccgctcagtgatgaaggatgtatgagtgcaaagacagc 5483 Query: 528 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 587 |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 5482 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagcttactgatcgag 5423 Query: 588 cgcccttgcgctgaagat 605 ||| ||||| | |||||| Sbjct: 5422 cgctcttgcaccgaagat 5405
>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA gene, 23S rRNA gene (partial) and 5S rRNA gene Length = 6689 Score = 498 bits (251), Expect = e-137 Identities = 291/303 (96%), Gaps = 1/303 (0%) Strand = Plus / Plus Query: 303 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 362 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 317 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 376 Query: 363 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 422 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 377 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 436 Query: 423 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 482 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 437 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 496 Query: 483 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 542 ||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 497 taaatgatcgctcagtgataaaggaggtaggggtgc-gagacagccaggaggtttgccta 555 Query: 543 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 602 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 556 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 615 Query: 603 gat 605 ||| Sbjct: 616 gat 618 Score = 400 bits (202), Expect = e-108 Identities = 266/285 (93%), Gaps = 7/285 (2%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 60 ||||| |||||||||||||||||||||||||||||||||||| || | |||||||| Sbjct: 20 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataacggatgacgttggttaa 79 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 | |||||||||||| |||||||||||||||||||||| ||||||| |||||||||| Sbjct: 80 g-----ggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactg 133 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 134 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaa 193 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 194 gtggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 253 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgtt 285 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 254 atgccactcgaacccagagctagctggttctccccgaaatgcgtt 298
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 492 bits (248), Expect = e-136 Identities = 417/471 (88%), Gaps = 3/471 (0%) Strand = Plus / Plus Query: 119 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 178 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 179 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 238 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 239 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 298 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 299 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 358 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 359 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 416 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 417 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 476 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 477 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 536 ||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||| Sbjct: 1012 ggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtt 1071 Query: 537 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 587 |||||||||| ||||||| ||||||||||||||||||||| |||||||||| Sbjct: 1072 tgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgag 1122 Score = 54.0 bits (27), Expect = 5e-04 Identities = 53/62 (85%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| || ||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccacgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 62 gg 63 || Sbjct: 602 gg 603
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 492 bits (248), Expect = e-136 Identities = 417/471 (88%), Gaps = 3/471 (0%) Strand = Plus / Plus Query: 119 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 178 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 179 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 238 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 239 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 298 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 299 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 358 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 359 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 416 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 417 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 476 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 477 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 536 ||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||| Sbjct: 1012 ggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtt 1071 Query: 537 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 587 |||||||||| ||||||| ||||||||||||||||||||| |||||||||| Sbjct: 1072 tgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgag 1122 Score = 61.9 bits (31), Expect = 2e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 62 gg 63 || Sbjct: 602 gg 603
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 492 bits (248), Expect = e-136 Identities = 417/471 (88%), Gaps = 3/471 (0%) Strand = Plus / Plus Query: 119 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 178 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 179 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 238 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 239 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 298 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 299 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 358 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 359 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 416 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 417 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 476 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 477 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 536 ||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||| Sbjct: 1012 ggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtt 1071 Query: 537 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 587 |||||||||| ||||||| ||||||||||||||||||||| |||||||||| Sbjct: 1072 tgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgag 1122 Score = 61.9 bits (31), Expect = 2e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 62 gg 63 || Sbjct: 602 gg 603
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 492 bits (248), Expect = e-136 Identities = 417/471 (88%), Gaps = 3/471 (0%) Strand = Plus / Plus Query: 119 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 178 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 179 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 238 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 239 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 298 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 299 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 358 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 359 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 416 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 417 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 476 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 477 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 536 ||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||| Sbjct: 1012 ggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtt 1071 Query: 537 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 587 |||||||||| ||||||| ||||||||||||||||||||| |||||||||| Sbjct: 1072 tgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgag 1122 Score = 61.9 bits (31), Expect = 2e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 62 gg 63 || Sbjct: 602 gg 603
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 492 bits (248), Expect = e-136 Identities = 417/471 (88%), Gaps = 3/471 (0%) Strand = Plus / Plus Query: 119 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 178 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 652 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 711 Query: 179 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 238 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 712 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 771 Query: 239 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 298 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 772 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 831 Query: 299 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 358 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 832 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 890 Query: 359 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 416 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 891 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 950 Query: 417 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 476 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 951 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1010 Query: 477 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 536 ||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||| Sbjct: 1011 ggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtt 1070 Query: 537 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 587 |||||||||| ||||||| ||||||||||||||||||||| |||||||||| Sbjct: 1071 tgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgag 1121 Score = 61.9 bits (31), Expect = 2e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 600 Query: 62 gg 63 || Sbjct: 601 gg 602
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 492 bits (248), Expect = e-136 Identities = 417/471 (88%), Gaps = 3/471 (0%) Strand = Plus / Plus Query: 119 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 178 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 179 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 238 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 239 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 298 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 299 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 358 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 359 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 416 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 417 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 476 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 477 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 536 ||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||| Sbjct: 1012 ggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtt 1071 Query: 537 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 587 |||||||||| ||||||| ||||||||||||||||||||| |||||||||| Sbjct: 1072 tgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgag 1122 Score = 61.9 bits (31), Expect = 2e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 62 gg 63 || Sbjct: 602 gg 603
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 492 bits (248), Expect = e-136 Identities = 417/471 (88%), Gaps = 3/471 (0%) Strand = Plus / Plus Query: 119 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 178 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 179 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 238 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 239 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 298 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 299 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 358 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 359 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 416 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 417 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 476 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 477 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 536 ||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||| Sbjct: 1012 ggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtt 1071 Query: 537 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 587 |||||||||| ||||||| ||||||||||||||||||||| |||||||||| Sbjct: 1072 tgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgag 1122 Score = 61.9 bits (31), Expect = 2e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 62 gg 63 || Sbjct: 602 gg 603
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 492 bits (248), Expect = e-136 Identities = 417/471 (88%), Gaps = 3/471 (0%) Strand = Plus / Plus Query: 119 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 178 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 179 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 238 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 239 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 298 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 299 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 358 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 359 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 416 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 417 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 476 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 477 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 536 ||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||| Sbjct: 1012 ggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtt 1071 Query: 537 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 587 |||||||||| ||||||| ||||||||||||||||||||| |||||||||| Sbjct: 1072 tgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgag 1122 Score = 61.9 bits (31), Expect = 2e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 62 gg 63 || Sbjct: 602 gg 603
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 492 bits (248), Expect = e-136 Identities = 417/471 (88%), Gaps = 3/471 (0%) Strand = Plus / Plus Query: 119 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 178 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 179 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 238 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 239 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 298 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 299 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 358 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 359 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 416 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 417 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 476 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 477 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 536 ||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||| Sbjct: 1012 ggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtt 1071 Query: 537 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 587 |||||||||| ||||||| ||||||||||||||||||||| |||||||||| Sbjct: 1072 tgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgag 1122 Score = 61.9 bits (31), Expect = 2e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 62 gg 63 || Sbjct: 602 gg 603
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 492 bits (248), Expect = e-136 Identities = 417/471 (88%), Gaps = 3/471 (0%) Strand = Plus / Plus Query: 119 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 178 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 179 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 238 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 239 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 298 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 299 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 358 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 359 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 416 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 417 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 476 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 477 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 536 ||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||| Sbjct: 1012 ggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtt 1071 Query: 537 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 587 |||||||||| ||||||| ||||||||||||||||||||| |||||||||| Sbjct: 1072 tgcctagaaggagccaccttttaaagagtgcgtaatagctaactgatcgag 1122 Score = 61.9 bits (31), Expect = 2e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 62 gg 63 || Sbjct: 602 gg 603
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 484 bits (244), Expect = e-133 Identities = 416/471 (88%), Gaps = 3/471 (0%) Strand = Plus / Plus Query: 119 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 178 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 179 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 238 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 239 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 298 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 299 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 358 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 359 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 416 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 417 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 476 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 477 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 536 ||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||| Sbjct: 1012 ggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtt 1071 Query: 537 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 587 |||||||||| |||||| ||||||||||||||||||||| |||||||||| Sbjct: 1072 tgcctagaagaggccaccttttaaagagtgcgtaatagctaactgatcgag 1122 Score = 61.9 bits (31), Expect = 2e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 62 gg 63 || Sbjct: 602 gg 603
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 484 bits (244), Expect = e-133 Identities = 416/471 (88%), Gaps = 3/471 (0%) Strand = Plus / Plus Query: 119 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 178 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 652 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 711 Query: 179 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 238 ||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||| Sbjct: 712 aagtggaggtccgaacagattgatgttgaagaatcagcggatgagttgtggttaggggtg 771 Query: 239 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 298 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 772 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 831 Query: 299 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 358 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 832 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 890 Query: 359 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 416 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 891 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 950 Query: 417 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 476 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 951 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1010 Query: 477 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 536 ||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||| Sbjct: 1011 ggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtt 1070 Query: 537 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 587 |||||||||| ||||||| ||||||||||||||||||||| |||||||||| Sbjct: 1071 tgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgag 1121 Score = 61.9 bits (31), Expect = 2e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 600 Query: 62 gg 63 || Sbjct: 601 gg 602
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 484 bits (244), Expect = e-133 Identities = 416/471 (88%), Gaps = 3/471 (0%) Strand = Plus / Plus Query: 119 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 178 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 179 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 238 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 239 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 298 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 299 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 358 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 359 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 416 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 417 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 476 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 477 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 536 ||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| | | Sbjct: 1012 ggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagct 1071 Query: 537 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 587 |||||||||| ||||||| ||||||||||||||||||||| |||||||||| Sbjct: 1072 tgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgag 1122 Score = 61.9 bits (31), Expect = 2e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 62 gg 63 || Sbjct: 602 gg 603
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 484 bits (244), Expect = e-133 Identities = 417/471 (88%), Gaps = 4/471 (0%) Strand = Plus / Plus Query: 119 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 178 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 179 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 238 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 239 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 298 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagc-gt 831 Query: 299 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 358 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 832 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 890 Query: 359 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 416 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 891 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 950 Query: 417 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 476 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 951 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1010 Query: 477 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 536 ||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||| Sbjct: 1011 ggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtt 1070 Query: 537 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 587 |||||||||| ||||||| ||||||||||||||||||||| |||||||||| Sbjct: 1071 tgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgag 1121 Score = 61.9 bits (31), Expect = 2e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 62 gg 63 || Sbjct: 602 gg 603
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 484 bits (244), Expect = e-133 Identities = 416/471 (88%), Gaps = 3/471 (0%) Strand = Plus / Plus Query: 119 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 178 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 179 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 238 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 239 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 298 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| || || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagtcgt 832 Query: 299 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 358 | || ||| ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 t-accagacctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 359 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 416 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 417 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 476 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 477 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 536 ||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||| Sbjct: 1012 ggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtt 1071 Query: 537 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 587 |||||||||| ||||||| ||||||||||||||||||||| |||||||||| Sbjct: 1072 tgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgag 1122 Score = 61.9 bits (31), Expect = 2e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 62 gg 63 || Sbjct: 602 gg 603
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 476 bits (240), Expect = e-131 Identities = 415/471 (88%), Gaps = 3/471 (0%) Strand = Plus / Plus Query: 119 tgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaact 178 |||||||||||| ||| || |||||||| ||||||||| |||||| || | ||||||| Sbjct: 653 tgcttatggaccagaatttgagtgatctaaccatgaccaagatgaaatttagttgaaact 712 Query: 179 aagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtg 238 ||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 713 aagtggaggtccgaacagactgatgttgaagaatcagcggatgagttgtggttaggggtg 772 Query: 239 aaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagt 298 ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||| || Sbjct: 773 aaatgtcaatcgaacccaaagctagctggttctccccgaaatgcgtttaggcggagccgt 832 Query: 299 tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 358 | | || ||||||||||||||||| ||||||||| || ||| |||||||||||||| Sbjct: 833 atccag-acctctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaat 891 Query: 359 cgaggcaaactctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggcca 416 |||||||||| |||||| |||||||||| ||||||||||||||| | ||||| | ||| Sbjct: 892 tgaggcaaactatgaatattagatatgacttccaaaaataacagggataaaggtggacca 951 Query: 417 gtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaa 476 | ||||| ||||||||||||||||||||||||||||| |||| ||| |||||| |||||| Sbjct: 952 gcgagaccatgggggataagcttcatcgtcgagaggggaacaacccagatcactagctaa 1011 Query: 477 ggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtt 536 ||||||||||||||| || ||| ||||||||||| |||||||| | ||| |||||| ||| Sbjct: 1012 ggcccctaaatgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtt 1071 Query: 537 tgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 587 |||||||||| ||||||| ||||||||||||||||||||| |||||||||| Sbjct: 1072 tgcctagaagaagccaccttttaaagagtgcgtaatagctaactgatcgag 1122 Score = 61.9 bits (31), Expect = 2e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 62 gg 63 || Sbjct: 602 gg 603
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 468 bits (236), Expect = e-128 Identities = 275/287 (95%), Gaps = 6/287 (2%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 535 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 594 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 595 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 648 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 649 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 708 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 709 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 768 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgag 288 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 769 tgccactcgaacccagagctagctggttctccccgaaatgcgttgag 815
>dbj|AK105766.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E02, full insert sequence Length = 2146 Score = 468 bits (236), Expect = e-128 Identities = 236/236 (100%) Strand = Plus / Plus Query: 370 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 429 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 60 Query: 430 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 489 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 120 Query: 490 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 549 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 180 Query: 550 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 236
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 460 bits (232), Expect = e-126 Identities = 345/379 (91%), Gaps = 8/379 (2%) Strand = Plus / Plus Query: 8 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacg 67 |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| Sbjct: 570 ccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaagggaat- 628 Query: 68 gaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 127 |||||| |||| |||||||||| |||||| |||||||||||||||| |||||| Sbjct: 629 ----ccaccg-aagccatagcgaaagcaagtctttc-agggcgattgtcactgtttatgg 682 Query: 128 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 187 ||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| |||| Sbjct: 683 acccgaacccgggtgatctatccatgaccaggatgaagcttgggtgaaaccaagtggagg 742 Query: 188 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 247 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 743 tccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccac 802 Query: 248 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 307 |||||| | ||||||||||||||||||||||||||||||||||||||| ||| | ||| | Sbjct: 803 tcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatgggc 862 Query: 308 -atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 366 || ||||||||||||||||||||||||||||||||| |||||||||||||||| |||| Sbjct: 863 tatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgcaa 922 Query: 367 actctgaatactagatatg 385 ||||||||||||| ||||| Sbjct: 923 actctgaatactaaatatg 941 Score = 200 bits (101), Expect = 4e-48 Identities = 170/193 (88%) Strand = Plus / Plus Query: 413 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 472 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010 Query: 473 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 532 |||||||||||||| | |||| |||| |||||||||| | ||||| |||||||||||| Sbjct: 1011 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagccagga 1070 Query: 533 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 592 ||||||| |||||||||| | |||| |||||||||||||||||||||||||| ||||| | Sbjct: 1071 ggtttgcttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgctc 1130 Query: 593 ttgcgctgaagat 605 |||||| |||||| Sbjct: 1131 ttgcgccgaagat 1143
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 460 bits (232), Expect = e-126 Identities = 345/379 (91%), Gaps = 8/379 (2%) Strand = Plus / Plus Query: 8 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacg 67 |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| Sbjct: 3604 ccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaagggaat- 3662 Query: 68 gaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 127 |||||| |||| |||||||||| |||||| |||||||||||||||| |||||| Sbjct: 3663 ----ccaccg-aagccatagcgaaagcaagtctttc-agggcgattgtcactgtttatgg 3716 Query: 128 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 187 ||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| |||| Sbjct: 3717 acccgaacccgggtgatctatccatgaccaggatgaagcttgggtgaaaccaagtggagg 3776 Query: 188 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 247 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 3777 tccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccac 3836 Query: 248 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 307 |||||| | ||||||||||||||||||||||||||||||||||||||| ||| | ||| | Sbjct: 3837 tcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatgggc 3896 Query: 308 -atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 366 || ||||||||||||||||||||||||||||||||| |||||||||||||||| |||| Sbjct: 3897 tatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgcaa 3956 Query: 367 actctgaatactagatatg 385 ||||||||||||| ||||| Sbjct: 3957 actctgaatactaaatatg 3975 Score = 200 bits (101), Expect = 4e-48 Identities = 170/193 (88%) Strand = Plus / Plus Query: 413 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 472 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 3985 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 4044 Query: 473 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 532 |||||||||||||| | |||| |||| |||||||||| | ||||| |||||||||||| Sbjct: 4045 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagccagga 4104 Query: 533 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 592 ||||||| |||||||||| | |||| |||||||||||||||||||||||||| ||||| | Sbjct: 4105 ggtttgcttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgctc 4164 Query: 593 ttgcgctgaagat 605 |||||| |||||| Sbjct: 4165 ttgcgccgaagat 4177
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 456 bits (230), Expect = e-125 Identities = 350/386 (90%), Gaps = 7/386 (1%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||| | |||||| |||||||| Sbjct: 579 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataagtagtggcctggttaag 638 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 || ||||| ||||| |||| |||||||||| |||||| ||||||| | ||||| ||| Sbjct: 639 gg----gaacc-accgg-agccatagcgaaagcaagtcttcatagggcaaatgtcattgc 692 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 ||||| |||||||| ||||||||||| |||||||||||||||| |||| |||||||||| Sbjct: 693 ttatgtacccgaacttgggtgatctaaccatgaccaggatgaaatttggttgaaactaag 752 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 753 tggaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 812 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 ||||| ||||||||| |||||||||||||||||||||||||||| ||| ||||||||| | Sbjct: 813 tgccaatcgaacccaaagctagctggttctccccgaaatgcgtttaggggcagcagtt-a 871 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 | ||||||||||||||||||||||||||||||||||| || |||||||||||||| || Sbjct: 872 ccggacatctaggggtaaagcactgtttcggtgcgggtctcgagagcggtaccaaattga 931 Query: 362 ggcaaactctgaatactagatatgac 387 |||||||| ||||||||||||||||| Sbjct: 932 ggcaaactatgaatactagatatgac 957 Score = 283 bits (143), Expect = 3e-73 Identities = 176/187 (94%) Strand = Plus / Plus Query: 412 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 471 |||||||||||| |||||||||||||||||||||| |||||| |||||||| |||||||| Sbjct: 1000 ggccagtgagaccatgggggataagcttcatcgtcaagaggggaacagcccagatcacca 1059 Query: 472 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 531 ||||||||||||||||||||||| ||| ||||||||||| |||||||| ||||||||||| Sbjct: 1060 gctaaggcccctaaatgaccgctaagttataaaggaggtaggggtgcatagacagccagg 1119 Query: 532 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 591 ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1120 aggtttgcctagaagaagccaccctttaaagagtgcgtaatagctaactgatcgagcgct 1179 Query: 592 cttgcgc 598 ||||||| Sbjct: 1180 cttgcgc 1186
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 456 bits (230), Expect = e-125 Identities = 346/381 (90%), Gaps = 8/381 (2%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 563 tctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcgtggttaa 622 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 ||||| |||||| ||||||||||||||||||||| || |||||||||||||||| Sbjct: 623 gggaatt-----caccgg-agccgtagcgaaagcgagtct-aacagggcgattgtcactg 675 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||| |||||||||||||||| |||||||||||||||| |||||| || Sbjct: 676 cttatggacccgaacccgggtgatctatccatggccaggatgaagcttgggtgaaaccaa 735 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 | ||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct: 736 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttagcggtgaa 795 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 || ||| |||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 796 ataccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtta 855 Query: 301 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 359 | ||| | |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 856 attgggctgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 915 Query: 360 gaggcaaactctgaatactag 380 ||||||||||||||||||||| Sbjct: 916 gaggcaaactctgaatactag 936 Score = 280 bits (141), Expect = 5e-72 Identities = 180/193 (93%) Strand = Plus / Plus Query: 413 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 472 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 953 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 1012 Query: 473 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 532 ||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||||| Sbjct: 1013 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccagga 1072 Query: 533 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 592 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 1073 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctc 1132 Query: 593 ttgcgctgaagat 605 |||||| |||||| Sbjct: 1133 ttgcgccgaagat 1145
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 452 bits (228), Expect = e-124 Identities = 344/379 (90%), Gaps = 8/379 (2%) Strand = Plus / Plus Query: 8 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacg 67 |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| Sbjct: 570 ccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaagggaat- 628 Query: 68 gaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 127 |||||| |||| |||||||||| |||||| |||||||||||||||| |||||| Sbjct: 629 ----ccaccg-aagccatagcgaaagcaagtctttc-agggcgattgtcactgtttatgg 682 Query: 128 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 187 ||||||||| ||||||||||||||||||||||||||||||||| | |||| ||| |||| Sbjct: 683 acccgaacccgggtgatctatccatgaccaggatgaagcttgggtaaaaccaagtggagg 742 Query: 188 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 247 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 743 tccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaatgccac 802 Query: 248 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 307 |||||| | ||||||||||||||||||||||||||||||||||||||| ||| | ||| | Sbjct: 803 tcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttaaatgggc 862 Query: 308 -atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 366 || ||||||||||||||||||||||||||||||||| |||||||||||||||| |||| Sbjct: 863 tatttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgcaa 922 Query: 367 actctgaatactagatatg 385 ||||||||||||| ||||| Sbjct: 923 actctgaatactaaatatg 941 Score = 200 bits (101), Expect = 4e-48 Identities = 170/193 (88%) Strand = Plus / Plus Query: 413 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 472 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010 Query: 473 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 532 |||||||||||||| | |||| |||| |||||||||| | ||||| |||||||||||| Sbjct: 1011 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagccagga 1070 Query: 533 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 592 ||||||| |||||||||| | |||| |||||||||||||||||||||||||| ||||| | Sbjct: 1071 ggtttgcttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgctc 1130 Query: 593 ttgcgctgaagat 605 |||||| |||||| Sbjct: 1131 ttgcgccgaagat 1143
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 440 bits (222), Expect = e-120 Identities = 344/381 (90%), Gaps = 8/381 (2%) Strand = Plus / Minus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 124702 tctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcgtggttaa 124643 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 ||||| |||||| ||||||||||||||||||||| || |||||||||||||||| Sbjct: 124642 gggaatt-----caccgg-agccgtagcgaaagcgagtct-aacagggcgattgtcactg 124590 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | || Sbjct: 124589 cttatggacccgaacccgggtgatctatccatggccaggatgaagcttgggtgaagccaa 124530 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 | ||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct: 124529 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttagcggtgaa 124470 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 || ||| |||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 124469 ataccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtta 124410 Query: 301 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 359 | ||| | |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 124409 attgggctgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 124350 Query: 360 gaggcaaactctgaatactag 380 ||| ||||||||||||||||| Sbjct: 124349 gagtcaaactctgaatactag 124329 Score = 440 bits (222), Expect = e-120 Identities = 344/381 (90%), Gaps = 8/381 (2%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 95164 tctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcgtggttaa 95223 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 ||||| |||||| ||||||||||||||||||||| || |||||||||||||||| Sbjct: 95224 gggaatt-----caccgg-agccgtagcgaaagcgagtct-aacagggcgattgtcactg 95276 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 |||||||||||||||| |||||||||||||||| |||||||||||||||| |||| | || Sbjct: 95277 cttatggacccgaacccgggtgatctatccatggccaggatgaagcttgggtgaagccaa 95336 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 | ||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct: 95337 gtggaggtccgaaccgactgatgttgaaaaatcagcggatgagctgtggttagcggtgaa 95396 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 || ||| |||||| | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 95397 ataccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtta 95456 Query: 301 actggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatc 359 | ||| | |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 95457 attgggctgcctaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatc 95516 Query: 360 gaggcaaactctgaatactag 380 ||| ||||||||||||||||| Sbjct: 95517 gagtcaaactctgaatactag 95537 Score = 280 bits (141), Expect = 5e-72 Identities = 180/193 (93%) Strand = Plus / Minus Query: 413 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 472 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 124312 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 124253 Query: 473 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 532 ||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||||| Sbjct: 124252 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccagga 124193 Query: 533 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 592 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 124192 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctc 124133 Query: 593 ttgcgctgaagat 605 |||||| |||||| Sbjct: 124132 ttgcgccgaagat 124120 Score = 280 bits (141), Expect = 5e-72 Identities = 180/193 (93%) Strand = Plus / Plus Query: 413 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 472 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 95554 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 95613 Query: 473 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 532 ||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||||| Sbjct: 95614 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccagga 95673 Query: 533 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 592 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 95674 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctc 95733 Query: 593 ttgcgctgaagat 605 |||||| |||||| Sbjct: 95734 ttgcgccgaagat 95746
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 420 bits (212), Expect = e-114 Identities = 335/372 (90%), Gaps = 3/372 (0%) Strand = Plus / Plus Query: 8 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacg 67 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4614 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaaat 4673 Query: 68 gaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 127 | || ||||| |||| |||||||||| |||||| |||||| |||||||||| ||||| Sbjct: 4674 tatcc-accgg-agccatagcgaaagcaagtctttttagggctattgtcactgtctatgg 4731 Query: 128 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 187 ||||||||| |||||||||| ||||| |||||||||||||||| | |||||||| |||| Sbjct: 4732 acccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaactaagtggagg 4791 Query: 188 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 247 ||| ||||||| ||||||||| |||| ||||||||| ||||||||| ||||||||||||| Sbjct: 4792 tccaaaccgaccgatgttgaaaaatcggcggatgagctgtggttagtggtgaaatgccac 4851 Query: 248 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 307 |||||| | |||||||||||||||||||||||||||||||||||||||| || |||| || Sbjct: 4852 tcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcaattaactgcac 4911 Query: 308 -atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 366 ||| ||||||||||||||||||||||||||||| || || |||||||||||||||||| Sbjct: 4912 tatccaggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatcgaggcaa 4971 Query: 367 actctgaatact 378 |||||||||||| Sbjct: 4972 actctgaatact 4983 Score = 234 bits (118), Expect = 3e-58 Identities = 172/190 (90%) Strand = Plus / Plus Query: 416 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 475 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 5005 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 5064 Query: 476 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 535 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| ||| |||| Sbjct: 5065 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagacaatcagtaggt 5124 Query: 536 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 595 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 5125 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctcttg 5184 Query: 596 cgctgaagat 605 ||| |||||| Sbjct: 5185 cgccgaagat 5194
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 420 bits (212), Expect = e-114 Identities = 335/372 (90%), Gaps = 3/372 (0%) Strand = Plus / Plus Query: 8 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacg 67 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 581 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaaat 640 Query: 68 gaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 127 | || ||||| |||| |||||||||| |||||| |||||| |||||||||| ||||| Sbjct: 641 tatcc-accgg-agccatagcgaaagcaagtctttttagggctattgtcactgtctatgg 698 Query: 128 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 187 ||||||||| |||||||||| ||||| |||||||||||||||| | |||||||| |||| Sbjct: 699 acccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaactaagtggagg 758 Query: 188 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 247 ||| ||||||| ||||||||| |||| ||||||||| ||||||||| ||||||||||||| Sbjct: 759 tccaaaccgaccgatgttgaaaaatcggcggatgagctgtggttagtggtgaaatgccac 818 Query: 248 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 307 |||||| | |||||||||||||||||||||||||||||||||||||||| || |||| || Sbjct: 819 tcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcaattaactgcac 878 Query: 308 -atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 366 ||| ||||||||||||||||||||||||||||| || || |||||||||||||||||| Sbjct: 879 tatccaggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatcgaggcaa 938 Query: 367 actctgaatact 378 |||||||||||| Sbjct: 939 actctgaatact 950 Score = 234 bits (118), Expect = 3e-58 Identities = 172/190 (90%) Strand = Plus / Plus Query: 416 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 475 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 1031 Query: 476 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 535 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| ||| |||| Sbjct: 1032 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagacaatcagtaggt 1091 Query: 536 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 595 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 1092 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctcttg 1151 Query: 596 cgctgaagat 605 ||| |||||| Sbjct: 1152 cgccgaagat 1161
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 420 bits (212), Expect = e-114 Identities = 335/372 (90%), Gaps = 3/372 (0%) Strand = Plus / Plus Query: 8 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacg 67 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 581 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaaat 640 Query: 68 gaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatgg 127 | || ||||| |||| |||||||||| |||||| |||||| |||||||||| ||||| Sbjct: 641 tatcc-accgg-agccatagcgaaagcaagtctttttagggctattgtcactgtctatgg 698 Query: 128 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 187 ||||||||| |||||||||| ||||| |||||||||||||||| | |||||||| |||| Sbjct: 699 acccgaacccgggtgatctaaccatggccaggatgaagcttgggtaaaactaagtggagg 758 Query: 188 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 247 ||| ||||||| ||||||||| |||| ||||||||| ||||||||| ||||||||||||| Sbjct: 759 tccaaaccgaccgatgttgaaaaatcggcggatgagctgtggttagtggtgaaatgccac 818 Query: 248 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 307 |||||| | |||||||||||||||||||||||||||||||||||||||| || |||| || Sbjct: 819 tcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcaattaactgcac 878 Query: 308 -atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 366 ||| ||||||||||||||||||||||||||||| || || |||||||||||||||||| Sbjct: 879 tatccaggggtaaagcactgtttcggtgcgggctacgaaagtggtaccaaatcgaggcaa 938 Query: 367 actctgaatact 378 |||||||||||| Sbjct: 939 actctgaatact 950 Score = 226 bits (114), Expect = 7e-56 Identities = 171/190 (90%) Strand = Plus / Plus Query: 416 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 475 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 1031 Query: 476 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 535 ||||||||||||| ||||| |||| ||||| ||||||| ||||||||||| ||| |||| Sbjct: 1032 aggcccctaaatggccgctaagtggtaaagaaggtgggagtgcaaagacaatcagtaggt 1091 Query: 536 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 595 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 1092 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctcttg 1151 Query: 596 cgctgaagat 605 ||| |||||| Sbjct: 1152 cgccgaagat 1161
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 416 bits (210), Expect = e-113 Identities = 280/302 (92%), Gaps = 1/302 (0%) Strand = Plus / Plus Query: 80 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 139 |||||||||||||||||||||| |||||||| |||||||||||||||||||||||| || Sbjct: 751 agccgtagcgaaagcgagtctttctagggcgaatgtcactgcttatggacccgaacccgg 810 Query: 140 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 199 |||||||| ||||| ||||| |||||||||| |||| | ||| |||||||||||||||| Sbjct: 811 gtgatctaaccatggccagggtgaagcttgggtgaagccaagtggaggtccgaaccgact 870 Query: 200 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 259 ||||||||| |||||||||||||| ||||||||||||||||||||||||||||| | ||| Sbjct: 871 gatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccactcgaactcggag 930 Query: 260 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggta 318 |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 931 ctagctggttctccccgaaatgcgttgaggcgcagcggttgactggactgcctaggggta 990 Query: 319 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 378 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 991 aagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatact 1050 Query: 379 ag 380 || Sbjct: 1051 ag 1052 Score = 289 bits (146), Expect = 5e-75 Identities = 185/198 (93%) Strand = Plus / Plus Query: 408 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 467 |||| |||||| ||||| ||||||||||||||||||||| ||||||||||||||| || | Sbjct: 1063 ggtcagccagtaagacggtgggggataagcttcatcgtcaagagggaaacagcccagacc 1122 Query: 468 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 527 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1123 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1182 Query: 528 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 587 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1183 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 1242 Query: 588 cgcccttgcgctgaagat 605 ||| ||||||| |||||| Sbjct: 1243 cgctcttgcgccgaagat 1260 Score = 101 bits (51), Expect = 3e-18 Identities = 59/62 (95%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 678 tctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaa 737 Query: 61 gg 62 || Sbjct: 738 gg 739
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 416 bits (210), Expect = e-113 Identities = 280/302 (92%), Gaps = 1/302 (0%) Strand = Plus / Plus Query: 80 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 139 |||||||||||||||||||||| |||||||| |||||||||||||||||||||||| || Sbjct: 634 agccgtagcgaaagcgagtctttctagggcgaatgtcactgcttatggacccgaacccgg 693 Query: 140 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 199 |||||||| ||||| ||||| |||||||||| |||| | ||| |||||||||||||||| Sbjct: 694 gtgatctaaccatggccagggtgaagcttgggtgaagccaagtggaggtccgaaccgact 753 Query: 200 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 259 ||||||||| |||||||||||||| ||||||||||||||||||||||||||||| | ||| Sbjct: 754 gatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccactcgaactcggag 813 Query: 260 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggta 318 |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 814 ctagctggttctccccgaaatgcgttgaggcgcagcggttgactggactgcctaggggta 873 Query: 319 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 378 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 874 aagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatact 933 Query: 379 ag 380 || Sbjct: 934 ag 935 Score = 297 bits (150), Expect = 2e-77 Identities = 186/198 (93%) Strand = Plus / Plus Query: 408 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 467 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct: 946 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1005 Query: 468 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 527 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1006 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1065 Query: 528 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 587 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1066 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 1125 Query: 588 cgcccttgcgctgaagat 605 ||| ||||||| |||||| Sbjct: 1126 cgctcttgcgccgaagat 1143 Score = 101 bits (51), Expect = 3e-18 Identities = 59/62 (95%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 561 tctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaa 620 Query: 61 gg 62 || Sbjct: 621 gg 622
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 416 bits (210), Expect = e-113 Identities = 280/302 (92%), Gaps = 1/302 (0%) Strand = Plus / Plus Query: 80 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 139 |||||||||||||||||||||| |||||||| |||||||||||||||||||||||| || Sbjct: 647 agccgtagcgaaagcgagtctttctagggcgaatgtcactgcttatggacccgaacccgg 706 Query: 140 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 199 |||||||| ||||| ||||| |||||||||| |||| | ||| |||||||||||||||| Sbjct: 707 gtgatctaaccatggccagggtgaagcttgggtgaagccaagtggaggtccgaaccgact 766 Query: 200 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 259 ||||||||| |||||||||||||| ||||||||||||||||||||||||||||| | ||| Sbjct: 767 gatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccactcgaactcggag 826 Query: 260 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggta 318 |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 827 ctagctggttctccccgaaatgcgttgaggcgcagcggttgactggactgcctaggggta 886 Query: 319 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 378 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 887 aagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatact 946 Query: 379 ag 380 || Sbjct: 947 ag 948 Score = 297 bits (150), Expect = 2e-77 Identities = 186/198 (93%) Strand = Plus / Plus Query: 408 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 467 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct: 959 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1018 Query: 468 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 527 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1019 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1078 Query: 528 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 587 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1079 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 1138 Query: 588 cgcccttgcgctgaagat 605 ||| ||||||| |||||| Sbjct: 1139 cgctcttgcgccgaagat 1156 Score = 101 bits (51), Expect = 3e-18 Identities = 59/62 (95%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct: 574 tctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaa 633 Query: 61 gg 62 || Sbjct: 634 gg 635
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 394 bits (199), Expect = e-106 Identities = 341/383 (89%), Gaps = 8/383 (2%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| |||||||||| ||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 560 tctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctaggttaa 619 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 || | | || ||||| |||| |||||||||||||||||||||||||||| ||||||| Sbjct: 620 ggta-caaaa---accgg-agccatagcgaaagcgagtcttaatagggcgat-gtcactg 673 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 ||| |||||||||| |||||||||| ||||| |||||||||||||| | ||||||| | Sbjct: 674 tctatagacccgaacccgggtgatctaaccatggccaggatgaagctttggtgaaactca 733 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 | || |||||||||||| ||||||||| |||| |||||||||||||||||||||||||| Sbjct: 734 gtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaa 793 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||| |||||| | ||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 794 atgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttg 853 Query: 301 act--ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 358 | || ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 854 gatagggctttctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 913 Query: 359 cgaggcaaactctgaatactaga 381 ||| ||||||||||||||||||| Sbjct: 914 cgatgcaaactctgaatactaga 936 Score = 240 bits (121), Expect = 4e-60 Identities = 169/185 (91%) Strand = Plus / Plus Query: 414 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 473 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 952 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 1011 Query: 474 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 533 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| ||||||| Sbjct: 1012 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccaggag 1071 Query: 534 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 593 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 1072 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctct 1131 Query: 594 tgcgc 598 ||||| Sbjct: 1132 tgcgc 1136
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 394 bits (199), Expect = e-106 Identities = 341/383 (89%), Gaps = 8/383 (2%) Strand = Plus / Minus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| |||||||||| ||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 115102 tctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctaggttaa 115043 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 || | | || ||||| |||| |||||||||||||||||||||||||||| ||||||| Sbjct: 115042 ggta-caaaa---accgg-agccatagcgaaagcgagtcttaatagggcgat-gtcactg 114989 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 ||| |||||||||| |||||||||| ||||| |||||||||||||| | ||||||| | Sbjct: 114988 tctatagacccgaacccgggtgatctaaccatggccaggatgaagctttggtgaaactca 114929 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 | || |||||||||||| ||||||||| |||| |||||||||||||||||||||||||| Sbjct: 114928 gtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaa 114869 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||| |||||| | ||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 114868 atgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttg 114809 Query: 301 act--ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 358 | || ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 114808 gatagggctttctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 114749 Query: 359 cgaggcaaactctgaatactaga 381 ||| ||||||||||||||||||| Sbjct: 114748 cgatgcaaactctgaatactaga 114726 Score = 394 bits (199), Expect = e-106 Identities = 341/383 (89%), Gaps = 8/383 (2%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| |||||||||| ||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 86886 tctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctaggttaa 86945 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 || | | || ||||| |||| |||||||||||||||||||||||||||| ||||||| Sbjct: 86946 ggta-caaaa---accgg-agccatagcgaaagcgagtcttaatagggcgat-gtcactg 86999 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaa 180 ||| |||||||||| |||||||||| ||||| |||||||||||||| | ||||||| | Sbjct: 87000 tctatagacccgaacccgggtgatctaaccatggccaggatgaagctttggtgaaactca 87059 Query: 181 gcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaa 240 | || |||||||||||| ||||||||| |||| |||||||||||||||||||||||||| Sbjct: 87060 gtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaa 87119 Query: 241 atgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||| |||||| | ||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 87120 atgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggttg 87179 Query: 301 act--ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 358 | || ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 87180 gatagggctttctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 87239 Query: 359 cgaggcaaactctgaatactaga 381 ||| ||||||||||||||||||| Sbjct: 87240 cgatgcaaactctgaatactaga 87262 Score = 240 bits (121), Expect = 4e-60 Identities = 169/185 (91%) Strand = Plus / Minus Query: 414 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 473 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 114710 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 114651 Query: 474 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 533 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| ||||||| Sbjct: 114650 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccaggag 114591 Query: 534 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 593 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 114590 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctct 114531 Query: 594 tgcgc 598 ||||| Sbjct: 114530 tgcgc 114526 Score = 240 bits (121), Expect = 4e-60 Identities = 169/185 (91%) Strand = Plus / Plus Query: 414 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 473 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 87278 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 87337 Query: 474 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 533 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| ||||||| Sbjct: 87338 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccaggag 87397 Query: 534 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 593 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 87398 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctct 87457 Query: 594 tgcgc 598 ||||| Sbjct: 87458 tgcgc 87462
>gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0042L15, from chromosome 3, complete sequence Length = 172475 Score = 359 bits (181), Expect = 7e-96 Identities = 181/181 (100%) Strand = Plus / Minus Query: 425 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 484 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63889 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 63830 Query: 485 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 544 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63829 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 63770 Query: 545 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 604 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63769 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 63710 Query: 605 t 605 | Sbjct: 63709 t 63709
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 359 bits (181), Expect = 7e-96 Identities = 196/201 (97%) Strand = Plus / Plus Query: 378 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 437 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 19152830 tagatatgacccaaaaataacaggggccaaggtcggccagtgagacgatgggggataagc 19152889 Query: 438 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 497 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 19152890 ttcatcgtcgagagggaaacaacccggatcaccagctaaggcccctaaatgaccgctcag 19152949 Query: 498 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 557 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 19152950 tgataaaggaggtgggggtgcaaagatagccaggaggtttgcctagaagcagccaccctt 19153009 Query: 558 taaagagtgcgtaatagctca 578 |||||||||||| ||| |||| Sbjct: 19153010 taaagagtgcgttatatctca 19153030
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 359 bits (181), Expect = 7e-96 Identities = 275/305 (90%), Gaps = 1/305 (0%) Strand = Plus / Plus Query: 80 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 139 |||| |||||||||| |||||| ||||| |||||||||| |||||||||||||| || Sbjct: 646 agccatagcgaaagcaagtcttttcagggctattgtcactgtctatggacccgaacccgg 705 Query: 140 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 199 |||||||| ||||| |||||||||||||||| |||||||||| ||||||| ||||||| Sbjct: 706 gtgatctaaccatggccaggatgaagcttgggtgaaactaagtggaggtcccaaccgacc 765 Query: 200 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 259 ||||||||| |||| ||||||||| ||||||||| ||||||||||||||||||| | ||| Sbjct: 766 gatgttgaaaaatcggcggatgagctgtggttagtggtgaaatgccactcgaactcggag 825 Query: 260 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggta 318 ||||||||||||||||||||||||||||||||||||| || ||||||| ||| ||||||| Sbjct: 826 ctagctggttctccccgaaatgcgttgaggcgcagcaattaactggactatccaggggta 885 Query: 319 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 378 ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 886 aagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgagacaaactctgaatact 945 Query: 379 agata 383 |||| Sbjct: 946 ggata 950 Score = 234 bits (118), Expect = 3e-58 Identities = 172/190 (90%) Strand = Plus / Plus Query: 416 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 475 ||||||||| | |||||||||||| |||||| ||||||||||||||| || ||||||||| Sbjct: 967 agtgagacggtaggggataagctttatcgtcaagagggaaacagcccagaccaccagcta 1026 Query: 476 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 535 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| |||||||| Sbjct: 1027 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagacaatcaggaggt 1086 Query: 536 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 595 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| || | Sbjct: 1087 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctctcg 1146 Query: 596 cgctgaagat 605 ||| |||||| Sbjct: 1147 cgccgaagat 1156 Score = 91.7 bits (46), Expect = 3e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 8 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 65 ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 576 ccgcgtgcctgttgaagaatgagccggcgactcatagatagtggctgggttaagggaa 633
>dbj|AP005127.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0062D12 Length = 155408 Score = 359 bits (181), Expect = 7e-96 Identities = 196/201 (97%) Strand = Plus / Plus Query: 378 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 437 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 76225 tagatatgacccaaaaataacaggggccaaggtcggccagtgagacgatgggggataagc 76284 Query: 438 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 497 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 76285 ttcatcgtcgagagggaaacaacccggatcaccagctaaggcccctaaatgaccgctcag 76344 Query: 498 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 557 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 76345 tgataaaggaggtgggggtgcaaagatagccaggaggtttgcctagaagcagccaccctt 76404 Query: 558 taaagagtgcgtaatagctca 578 |||||||||||| ||| |||| Sbjct: 76405 taaagagtgcgttatatctca 76425
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 355 bits (179), Expect = 1e-94 Identities = 336/382 (87%), Gaps = 10/382 (2%) Strand = Plus / Plus Query: 4 ctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 63 ||| |||||||||||||||||||||||||||||||| ||| |||||||||||||| || Sbjct: 629 ctgaccgcgtgcctgttgaagaatgagccggcgacttataaaaagtggcttggttaa-gg 687 Query: 64 aacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgatt--gtcactgc 121 | ||| | |||| |||| ||||||||| |||||||||||||||||| |||||| Sbjct: 688 a---gaatcatccgg-agccagagcgaaagcaagtcttaatagggcgattttgtcacttt 743 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 ||||||||||||||| |||||||||| |||||||||||||||||||||| | |||| ||| Sbjct: 744 ttatggacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtaaaaccaag 803 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 || |||||||||||| ||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 804 tggaagtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaa 863 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 864 tgccaatcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcggttga 923 Query: 302 --ctg-gacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 358 || | ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 924 tgttgagctgtctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaat 983 Query: 359 cgaggcaaactctgaatactag 380 || ||||||| ||||||||| Sbjct: 984 cgtagcaaactaagaatactag 1005 Score = 190 bits (96), Expect = 4e-45 Identities = 150/168 (89%) Strand = Plus / Plus Query: 414 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 473 |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 1023 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcatcagc 1082 Query: 474 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 533 |||||||||| |||| ||||| |||| |||||||||| | ||| | ||| ||||||| Sbjct: 1083 taaggcccctgaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccaggag 1142 Query: 534 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 581 |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1143 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactg 1190
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 353 bits (178), Expect = 4e-94 Identities = 337/386 (87%), Gaps = 7/386 (1%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| || |||||| ||||||||||||| |||||||||||| | |||||| |||||||| Sbjct: 554 ctctgaccacgtgcccgttgaagaatgagtcggcgactcataagtagtggcctggttaag 613 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 || ||||| ||||| |||| |||||||||| |||||| |||||| | ||||| ||| Sbjct: 614 gg----gaacc-accgg-agccatagcgaaagcaagtcttcatagggaaaatgtcattgc 667 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 || ||||||||||| ||||||||||| |||||||||||||| | |||| | |||||||| Sbjct: 668 ttgtggacccgaacttgggtgatctaaccatgaccaggatgcaatttggttaaaactaag 727 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 728 tgggggtctgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 787 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 ||||| ||||||||| ||||||||||||| ||||||||||| || ||||||||||||| | Sbjct: 788 tgccaatcgaacccaaagctagctggttcgccccgaaatgcatttaggcgcagcagtt-a 846 Query: 302 ctggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcga 361 | || ||||||||||||||||| ||||| |||||||| || |||||||||||||| || Sbjct: 847 ccgggcatctaggggtaaagcattgttttggtgcgggtcacgagagcggtaccaaattga 906 Query: 362 ggcaaactctgaatactagatatgac 387 |||| ||| ||||||||||||||||| Sbjct: 907 ggcagactatgaatactagatatgac 932 Score = 192 bits (97), Expect = 9e-46 Identities = 170/193 (88%), Gaps = 1/193 (0%) Strand = Plus / Plus Query: 390 aaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgag 449 ||||||||||||| | | ||| | |||||||||| | ||||||||||||||||||||||| Sbjct: 944 aaaaataacagggataagggtggaccagtgagaccacgggggataagcttcatcgtcgag 1003 Query: 450 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 509 |||| |||| || |||||| ||||||| |||||||||||||||| ||| |||||||||| Sbjct: 1004 aggggaacattccagatcactagctaagccccctaaatgaccgctaagttataaaggagg 1063 Query: 510 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 569 | ||||||| ||||| |||||||||||||||||||| ||||||||||||||| |||| | Sbjct: 1064 t-agggtgcatagacatccaggaggtttgcctagaagaagccaccctttaaagcgtgcat 1122 Query: 570 aatagctcactga 582 ||||||| ||||| Sbjct: 1123 aatagctaactga 1135
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 349 bits (176), Expect = 7e-93 Identities = 276/308 (89%), Gaps = 1/308 (0%) Strand = Plus / Plus Query: 80 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 139 |||||||||||||||||||| | |||||| |||||||| ||||||||||||||| || Sbjct: 1038 agccgtagcgaaagcgagtcattcaagggcgcatgtcactgtttatggacccgaacccgg 1097 Query: 140 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 199 |||||||||||||| ||||| |||||||||| |||| | ||| |||| ||||||||||| Sbjct: 1098 gtgatctatccatggccagggtgaagcttgggtgaagccaagtggaggcccgaaccgact 1157 Query: 200 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 259 | ||||||| || ||||||||||| ||||||||||||||||||||||||||||| | ||| Sbjct: 1158 ggtgttgaaaaaccagcggatgagctgtggttaggggtgaaatgccactcgaactcggag 1217 Query: 260 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggta 318 |||||||||||||||||||||||||||||||||||| |||||| || | |||||||| Sbjct: 1218 ctagctggttctccccgaaatgcgttgaggcgcagcgattgactaaactgtttaggggta 1277 Query: 319 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 378 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1278 aagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatact 1337 Query: 379 agatatga 386 ||| |||| Sbjct: 1338 agacatga 1345 Score = 270 bits (136), Expect = 5e-69 Identities = 172/184 (93%) Strand = Plus / Plus Query: 415 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 474 ||||||||| ||||||||||||| ||| ||| ||||||||||||||| ||||||||||| Sbjct: 1358 cagtgagacagtgggggataagctccattgtcaagagggaaacagcccagatcaccagct 1417 Query: 475 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 534 ||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||| Sbjct: 1418 aaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagccaggagg 1477 Query: 535 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 594 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 1478 tttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctctt 1537 Query: 595 gcgc 598 |||| Sbjct: 1538 gcgc 1541 Score = 87.7 bits (44), Expect = 4e-14 Identities = 53/56 (94%) Strand = Plus / Plus Query: 8 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 63 |||||||||||||||||||||||||||||||| ||| |||||||| |||||||||| Sbjct: 974 ccgcgtgcctgttgaagaatgagccggcgacttataagcagtggcctggttaaggg 1029
>dbj|AK071923.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072N03, full insert sequence Length = 1663 Score = 349 bits (176), Expect = 7e-93 Identities = 176/176 (100%) Strand = Plus / Plus Query: 430 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 489 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 60 Query: 490 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 549 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 120 Query: 550 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 605 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 176
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 347 bits (175), Expect = 3e-92 Identities = 276/307 (89%), Gaps = 2/307 (0%) Strand = Plus / Plus Query: 80 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 139 ||||||||||||||| |||| || | || || |||||||| |||| |||||||||| || Sbjct: 591 agccgtagcgaaagcaagtcatatttgg-cgcatgtcactgtttatagacccgaacccgg 649 Query: 140 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 199 |||||||||||||| ||||| |||| ||||| |||| | ||| |||||||||||||||| Sbjct: 650 gtgatctatccatggccagggtgaaacttgggtgaagccaagtggaggtccgaaccgact 709 Query: 200 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 259 ||||||||| |||||||||||||| ||||||||||||||||||||||||||||| | ||| Sbjct: 710 gatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccactcgaactcggag 769 Query: 260 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggta 318 |||||||||||||||||||||||||||||||||||| |||| ||||| | |||||||| Sbjct: 770 ctagctggttctccccgaaatgcgttgaggcgcagcgattgattggactacttaggggta 829 Query: 319 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 378 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 830 aagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatact 889 Query: 379 agatatg 385 || |||| Sbjct: 890 aggtatg 896 Score = 291 bits (147), Expect = 1e-75 Identities = 180/191 (94%) Strand = Plus / Plus Query: 415 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 474 |||||||||| ||||||||||||||||||||| | ||||||||||||| |||||| |||| Sbjct: 912 cagtgagacggtgggggataagcttcatcgtcaaaagggaaacagcccagatcactagct 971 Query: 475 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 534 |||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct: 972 aaggccccaaaatgaccgctcagtgataaaggaggtgggagtgcaaagacatccaggagg 1031 Query: 535 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 594 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 1032 tttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctctt 1091 Query: 595 gcgctgaagat 605 |||| |||||| Sbjct: 1092 gcgccgaagat 1102 Score = 83.8 bits (42), Expect = 6e-13 Identities = 56/61 (91%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| |||||||||||||||||||||||||||||||| ||| | |||||| ||||||| Sbjct: 520 tctctgaccgcgtgcctgttgaagaatgagccggcgacttataagtagtggcctggttaa 579 Query: 61 g 61 | Sbjct: 580 g 580
>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 2661 Score = 333 bits (168), Expect = 4e-88 Identities = 270/301 (89%), Gaps = 6/301 (1%) Strand = Plus / Plus Query: 86 agcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaacctgggtga 143 ||||||||||||||| |||||||| || |||||| ||||||||||||||| |||||| Sbjct: 642 agcgaaagcgagtctgaatagggcacttttgtcactttttatggacccgaacccgggtga 701 Query: 144 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 203 |||| |||||||||||||||||||||| | |||| ||| ||||||||||||||| |||| Sbjct: 702 tctaaccatgaccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatg 761 Query: 204 ttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctag 263 ||||| |||| |||||||||||||||||||||||||||||||| |||||| | ||||||| Sbjct: 762 ttgaaaaatcggcggatgagttgtggttaggggtgaaatgccaatcgaactcggagctag 821 Query: 264 ctggttctccccgaaatgcgttgaggcgcagcagttgac---tggac-atctaggggtaa 319 |||||||||||||||||||||||||||||||| |||||| ||| | |||||||||||| Sbjct: 822 ctggttctccccgaaatgcgttgaggcgcagcggttgacgaatgggctatctaggggtaa 881 Query: 320 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 379 |||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||| Sbjct: 882 agcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaactaagaatacta 941 Query: 380 g 380 | Sbjct: 942 g 942 Score = 232 bits (117), Expect = 1e-57 Identities = 168/185 (90%) Strand = Plus / Plus Query: 414 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 473 ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 960 ccagtgagacgatgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1019 Query: 474 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 533 ||||||||||||||| ||||| |||||||||||||||| | ||| | ||| ||||||| Sbjct: 1020 taaggcccctaaatggccgctaagtgataaaggaggtgagaatgctgaaacaaccaggag 1079 Query: 534 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 593 |||||| ||||||||||||||||| ||||||||||||||||||||||| | ||||| || Sbjct: 1080 gtttgcttagaagcagccacccttaaaagagtgcgtaatagctcactggtggagcgttct 1139 Query: 594 tgcgc 598 ||||| Sbjct: 1140 tgcgc 1144 Score = 77.8 bits (39), Expect = 4e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 8 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 62 |||||| ||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 569 ccgcgttcctgttgaagaatgagccggcgacttatagaaagtggcttggttaagg 623
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 325 bits (164), Expect = 1e-85 Identities = 273/308 (88%), Gaps = 1/308 (0%) Strand = Plus / Plus Query: 80 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 139 |||| |||||||||| |||| || | ||||| |||||||| ||||||||||||||| || Sbjct: 597 agccatagcgaaagcaagtcataccaaggcgaatgtcactgtttatggacccgaacccgg 656 Query: 140 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 199 |||||||||||||| ||||||||||| |||| |||||| || |||||||||||||||| Sbjct: 657 gtgatctatccatggccaggatgaagtttgggtgaaaccaaatggaggtccgaaccgact 716 Query: 200 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 259 | ||||||| || || |||||||| ||||| ||||||||||||||||||||||| | ||| Sbjct: 717 ggtgttgaaaaaccaacggatgagctgtggataggggtgaaatgccactcgaactcggag 776 Query: 260 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac-atctaggggta 318 |||||||||||||||||||||||||||||||||||| ||||||| ||| || |||||||| Sbjct: 777 ctagctggttctccccgaaatgcgttgaggcgcagcggttgactagactatttaggggta 836 Query: 319 aagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 378 ||||||||||||||||||||||| | | ||||||||||| || |||||||||||||||| Sbjct: 837 aagcactgtttcggtgcgggctgtgaaaacggtaccaaattgatgcaaactctgaatact 896 Query: 379 agatatga 386 | |||||| Sbjct: 897 aaatatga 904 Score = 280 bits (141), Expect = 5e-72 Identities = 180/193 (93%) Strand = Plus / Plus Query: 413 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 472 |||||||||||| ||||||||||||| ||||||||| ||||||||||||| ||||||||| Sbjct: 915 gccagtgagacggtgggggataagctccatcgtcgaaagggaaacagcccagatcaccag 974 Query: 473 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 532 ||||||||||||||||||||| |||||||||||| ||| | |||||||||||||||||| Sbjct: 975 ttaaggcccctaaatgaccgctaagtgataaaggatgtgagagtgcaaagacagccagga 1034 Query: 533 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 592 |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| | Sbjct: 1035 ggtttgcctagaagcagctacccttgaaagagtgcgtaatagctcactgatcgagcgctc 1094 Query: 593 ttgcgctgaagat 605 |||||| |||||| Sbjct: 1095 ttgcgccgaagat 1107 Score = 97.6 bits (49), Expect = 4e-17 Identities = 57/60 (95%) Strand = Plus / Plus Query: 3 tctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 62 |||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||| Sbjct: 528 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctggttaagg 587
>gb|AY694134.1| Pennisetum glaucum clone PGP005 23S ribosomal RNA gene, partial sequence; chloroplast Length = 654 Score = 319 bits (161), Expect = 6e-84 Identities = 209/225 (92%) Strand = Plus / Minus Query: 381 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 440 ||||||||||||||||||| |||||||||||||||||| |||| ||||||| ||||||| Sbjct: 640 atatgacccaaaaataacacgggtcaaggtcggccagtaagacattgggggaaaagcttc 581 Query: 441 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 500 ||| || || ||||||||||||||| ||||||||||||| |||||||||||||| ||| Sbjct: 580 atcatctcgaaagaaacagcccggatccccagctaaggcccttaaatgaccgctcaatga 521 Query: 501 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 560 |||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||| Sbjct: 520 taaaggaggtgggggtgcaaagccagccatgaagtttgcctagaagcagccaccctttaa 461 Query: 561 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 605 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 460 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 416
>gb|AC147496.19| Medicago truncatula clone mth2-6i7, complete sequence Length = 148736 Score = 311 bits (157), Expect = 1e-81 Identities = 190/201 (94%) Strand = Plus / Minus Query: 184 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 243 ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| Sbjct: 141909 gaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttagcggtgaaatg 141850 Query: 244 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 303 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 141849 ccactcgaacccagagctagctggttctccctgaaatgcgttgaggcgcagcagttgact 141790 Query: 304 ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgagg 363 |||||| ||||||||||||| |||||||| ||||| ||| ||||||| ||||||||||| Sbjct: 141789 ggacatttaggggtaaagcattgtttcggcacgggccgcgggagcggttccaaatcgagg 141730 Query: 364 caaactctgaatactagatat 384 ||||||||||||| ||||||| Sbjct: 141729 caaactctgaatattagatat 141709
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 307 bits (155), Expect = 2e-80 Identities = 265/299 (88%), Gaps = 2/299 (0%) Strand = Plus / Plus Query: 86 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 145 ||||||||| |||||||||||||| |||||| ||||||||||||||| |||||||| Sbjct: 790 agcgaaagcaagtcttaatagggctcaggtcactctttatggacccgaacccgggtgatc 849 Query: 146 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 205 || |||||||||||||||||||| | | |||| || || |||||||||||| |||||| Sbjct: 850 taaccatgaccaggatgaagcttcggtaaaacggagtggaagtccgaaccgaccgatgtt 909 Query: 206 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 265 ||| |||| |||||||||||||||||||||||||||||||| |||||| | ||||||||| Sbjct: 910 gaaaaatcggcggatgagttgtggttaggggtgaaatgccaatcgaactcggagctagct 969 Query: 266 ggttctccccgaaatgcgttgaggcgcagcagttgac-tggac-atctaggggtaaagca 323 |||||||||||||||||||||||||||||| ||| || ||| | ||||||||||||||| Sbjct: 970 ggttctccccgaaatgcgttgaggcgcagcggttaacgtgggcggtctaggggtaaagca 1029 Query: 324 ctgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 382 |||||||||||||||||||| |||||||||||||||| ||||||| ||||||||||| Sbjct: 1030 ctgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaactaagaatactagat 1088 Score = 216 bits (109), Expect = 6e-53 Identities = 166/185 (89%) Strand = Plus / Plus Query: 414 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 473 ||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 1103 ccagtgagacggtgggggataagcttcatcgtcgaaagggaaacagcccagatcaccagc 1162 Query: 474 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 533 |||||||||| |||| ||||| |||| ||||||||||| | |||| | ||| ||||||| Sbjct: 1163 taaggcccctcaatggccgctaagtggtaaaggaggtgagaatgcagaaacaaccaggag 1222 Query: 534 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 593 |||||| |||||||||| |||||||||||||||||||||||||||||| | ||||| || Sbjct: 1223 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtggagcgttct 1282 Query: 594 tgcgc 598 ||||| Sbjct: 1283 tgcgc 1287 Score = 69.9 bits (35), Expect = 9e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 8 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 62 |||| ||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 717 ccgcatgcctgttgaagaatgagccggcgacttataaagagtggcttggttaagg 771
>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5398 Score = 307 bits (155), Expect = 2e-80 Identities = 246/274 (89%), Gaps = 3/274 (1%) Strand = Plus / Plus Query: 111 attgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgg 170 ||||||||| |||||||||||||||| |||||||||| ||||| |||||||||||||||| Sbjct: 800 attgtcacttcttatggacccgaacccgggtgatctaaccatggccaggatgaagcttgg 859 Query: 171 atgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggt 230 | |||| ||| ||||||||||||||| ||||||||| |||| |||||||||||||||| Sbjct: 860 gtaaaaccaagtggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggt 919 Query: 231 taggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggc 290 |||||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 920 taggggtgaaatgccaatcgaacctggagctagctggatctccccgaaatgcgttgaggc 979 Query: 291 gcagcagttgac--tggac-atctaggggtaaagcactgtttcggtgcgggctgcgcgag 347 ||||| ||| || ||| | ||||||||||||||||||||||||||||||||||| ||| Sbjct: 980 gcagcggttaacgatgggctgtctaggggtaaagcactgtttcggtgcgggctgcgagag 1039 Query: 348 cggtaccaaatcgaggcaaactctgaatactaga 381 ||||||||||||| ||||||| |||||||||| Sbjct: 1040 cggtaccaaatcgtagcaaactaagaatactaga 1073 Score = 200 bits (101), Expect = 4e-48 Identities = 164/185 (88%) Strand = Plus / Plus Query: 414 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 473 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 1090 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 1149 Query: 474 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 533 ||||||||| ||||||||||| |||| |||||| ||| | ||| | ||| |||| || Sbjct: 1150 taaggccccaaaatgaccgctaagtggcaaaggatgtgagaatgctgaaacaaccagaag 1209 Query: 534 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 593 |||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct: 1210 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtagagcgttct 1269 Query: 594 tgcgc 598 ||||| Sbjct: 1270 tgcgc 1274 Score = 85.7 bits (43), Expect = 2e-13 Identities = 52/55 (94%) Strand = Plus / Plus Query: 8 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 62 |||||||||||||||||||||||||||||||| ||| | |||||||||||||||| Sbjct: 696 ccgcgtgcctgttgaagaatgagccggcgacttataaggagtggcttggttaagg 750
>gb|DQ160149.1| Taraxacum officinale To116-3 mRNA, partial sequence Length = 187 Score = 301 bits (152), Expect = 1e-78 Identities = 174/180 (96%), Gaps = 1/180 (0%) Strand = Plus / Plus Query: 67 ggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatg 126 |||||||||||| |||||||||||||||||||||| ||||||| |||||||||||||||| Sbjct: 5 ggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgcttatg 63 Query: 127 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 186 |||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| Sbjct: 64 gacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaagtggag 123 Query: 187 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 246 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 183
>emb|AJ245645.1|PWI245645 Prototheca wickerhamii chloroplast partial genome Length = 22085 Score = 299 bits (151), Expect = 6e-78 Identities = 237/263 (90%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 127 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 186 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 6375 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 6434 Query: 187 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 246 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 6435 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 6494 Query: 247 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 305 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 6495 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 6554 Query: 306 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 364 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 6555 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 6614 Query: 365 aaactctgaatactagatatgac 387 ||||||||||||||||| ||||| Sbjct: 6615 aaactctgaatactagaaatgac 6637 Score = 131 bits (66), Expect = 3e-27 Identities = 141/166 (84%) Strand = Plus / Plus Query: 416 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 475 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || ||||||||| Sbjct: 6646 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagcta 6705 Query: 476 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 535 ||||||| ||||| ||||| |||||||||| |||||| ||| ||||||||| Sbjct: 6706 aggccccaaaatggtaatgtagtgacaaaggaggtgaaaatgcaaatacaaccaggaggt 6765 Query: 536 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 581 | || |||||||||||| |||||||||||||||||||||||||||| Sbjct: 6766 tggcttagaagcagccatcctttaaagagtgcgtaatagctcactg 6811 Score = 58.0 bits (29), Expect = 4e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 4 ctgnccgcgtgcctgttgaagaatgagccggcgact 39 ||| |||| ||||||||||||||||||||||||||| Sbjct: 6234 ctgaccgcatgcctgttgaagaatgagccggcgact 6269 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 80 agccgtagcgaaagcgagtcttaatagggcgat 112 ||||||||| ||||||||||| ||||||||||| Sbjct: 6304 agccgtagcaaaagcgagtctgaatagggcgat 6336
>emb|AJ222802.1|CHPW5KB Prototheca wickerhamii 5.0 kb plastid DNA fragment of ribosomal RNA genecluster Length = 5001 Score = 299 bits (151), Expect = 6e-78 Identities = 237/263 (90%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 127 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 186 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 3438 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 3497 Query: 187 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 246 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 3498 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 3557 Query: 247 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 305 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 3558 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 3617 Query: 306 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 364 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 3618 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 3677 Query: 365 aaactctgaatactagatatgac 387 ||||||||||||||||| ||||| Sbjct: 3678 aaactctgaatactagaaatgac 3700 Score = 131 bits (66), Expect = 3e-27 Identities = 141/166 (84%) Strand = Plus / Plus Query: 416 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 475 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || ||||||||| Sbjct: 3709 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagcta 3768 Query: 476 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 535 ||||||| ||||| ||||| |||||||||| |||||| ||| ||||||||| Sbjct: 3769 aggccccaaaatggtaatgtagtgacaaaggaggtgaaaatgcaaatacaaccaggaggt 3828 Query: 536 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 581 | || |||||||||||| |||||||||||||||||||||||||||| Sbjct: 3829 tggcttagaagcagccatcctttaaagagtgcgtaatagctcactg 3874 Score = 58.0 bits (29), Expect = 4e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 4 ctgnccgcgtgcctgttgaagaatgagccggcgact 39 ||| |||| ||||||||||||||||||||||||||| Sbjct: 3297 ctgaccgcatgcctgttgaagaatgagccggcgact 3332 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 80 agccgtagcgaaagcgagtcttaatagggcgat 112 ||||||||| ||||||||||| ||||||||||| Sbjct: 3367 agccgtagcaaaagcgagtctgaatagggcgat 3399
>gb|L42851.1|PTOCPRGOL Prototheca wickerhamii large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2715 Score = 299 bits (151), Expect = 6e-78 Identities = 237/263 (90%), Gaps = 2/263 (0%) Strand = Plus / Plus Query: 127 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 186 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 726 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgataccaagtgaag 785 Query: 187 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 246 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 786 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 845 Query: 247 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 305 |||||||| |||||||||||||||||||||||||||||||||||||||||| | || | Sbjct: 846 gtcgaacccggagctagctggttctccccgaaatgcgttgaggcgcagcagtacatctag 905 Query: 306 ac-atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 364 | |||||||||||||||||||||||||||||||||| | || ||||||||||||| ||| Sbjct: 906 tctatctaggggtaaagcactgtttcggtgcgggctgtgagaacggtaccaaatcgtggc 965 Query: 365 aaactctgaatactagatatgac 387 ||||||||||||||||| ||||| Sbjct: 966 aaactctgaatactagaaatgac 988 Score = 131 bits (66), Expect = 3e-27 Identities = 141/166 (84%) Strand = Plus / Plus Query: 416 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 475 |||||||| ||||||||||||| ||| ||| ||||||||||||||| || ||||||||| Sbjct: 997 agtgagactgtgggggataagctccattgtcaagagggaaacagcccagaccaccagcta 1056 Query: 476 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 535 ||||||| ||||| ||||| |||||||||| |||||| ||| ||||||||| Sbjct: 1057 aggccccaaaatggtaatgtagtgacaaaggaggtgaaaatgcaaatacaaccaggaggt 1116 Query: 536 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 581 | || |||||||||||| |||||||||||||||||||||||||||| Sbjct: 1117 tggcttagaagcagccatcctttaaagagtgcgtaatagctcactg 1162 Score = 58.0 bits (29), Expect = 4e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 4 ctgnccgcgtgcctgttgaagaatgagccggcgact 39 ||| |||| ||||||||||||||||||||||||||| Sbjct: 585 ctgaccgcatgcctgttgaagaatgagccggcgact 620 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 80 agccgtagcgaaagcgagtcttaatagggcgat 112 ||||||||| ||||||||||| ||||||||||| Sbjct: 655 agccgtagcaaaagcgagtctgaatagggcgat 687
>gb|AF322910.1|AF322910 Vigna radiata 23S ribosomal RNA, partial sequence; chloroplast gene for chloroplast product Length = 1041 Score = 297 bits (150), Expect = 2e-77 Identities = 168/174 (96%) Strand = Plus / Plus Query: 432 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 316 Query: 492 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 551 ||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||| Sbjct: 317 gctcagtgataaaggaggtaggggtgcagagacaaccaggaggtttgcctagaagcagcc 376 Query: 552 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 605 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 377 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 430
>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full insert sequence Length = 1822 Score = 295 bits (149), Expect = 9e-77 Identities = 161/164 (98%), Gaps = 1/164 (0%) Strand = Plus / Plus Query: 1 tctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 466 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 525 Query: 61 gggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactg 120 |||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 526 gggaacggaacccaccgg-agccgtagcgaaagcgagtcttcatagggcgattgtcactg 584 Query: 121 cttatggacccgaacctgggtgatctatccatgaccaggatgaa 164 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 585 cttatggacccgaacctgggtgatctatccatgaccaggatgaa 628
>emb|AM084275.1| Cyanoptyche gloeocystis cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 34.90 Length = 4586 Score = 289 bits (146), Expect = 5e-75 Identities = 265/302 (87%), Gaps = 2/302 (0%) Strand = Plus / Plus Query: 80 agccgtagcgaaagcgagtcttaatagggcgatt-gtcactgcttatggacccgaacctg 138 |||| |||||||||||||| ||||||| ||| || |||||| |||| |||||||||| | Sbjct: 2451 agccatagcgaaagcgagttttaatagagcgtttagtcactatttatagacccgaacccg 2510 Query: 139 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 198 ||||||||| ||||| ||||| |||||||| | | ||||||| |||| ||||||||| Sbjct: 2511 ggtgatctaaccatggccagggtgaagcttaggtaaaactaaatggaggcccgaaccgat 2570 Query: 199 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 258 ||||||||| |||| ||||||||||||||||||||||||||||||| |||||||| || Sbjct: 2571 cgatgttgaaaaatcgccggatgagttgtggttaggggtgaaatgccaatcgaacccgga 2630 Query: 259 gctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctggacatctaggggt 317 ||||||||||||||||||||||||||||||||||||| ||||| | || ||||||| Sbjct: 2631 gctagctggttctccccgaaatgcgttgaggcgcagcggttgatgttataatttaggggt 2690 Query: 318 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 377 ||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||| Sbjct: 2691 aaagcactgtttcggtgcgggctacgagagtggtaccaaatcgaggcaaactctgaatac 2750 Query: 378 ta 379 || Sbjct: 2751 ta 2752 Score = 153 bits (77), Expect = 8e-34 Identities = 143/165 (86%) Strand = Plus / Plus Query: 426 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 485 ||||||||||||| ||| ||| ||||||||||||||| || ||||| ||||||||||||| Sbjct: 2778 tgggggataagctccattgtcaagagggaaacagcccagaccaccatctaaggcccctaa 2837 Query: 486 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 545 || | ||| |||| ||||||||||| |||| ||||| ||||||||||||| ||||| Sbjct: 2838 ataatagctaagtgggaaaggaggtggaagtgcttagacaaccaggaggtttgcttagaa 2897 Query: 546 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 590 ||||| | |||||||||||||||||||||||||||| || ||||| Sbjct: 2898 gcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgc 2942 Score = 69.9 bits (35), Expect = 9e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 10 gcgtgcctgttgaagaatgagccggcgactcataggcagtggc 52 |||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 2385 gcgtgcctgttgaagaatgagccggcgacttataggtagtggc 2427
>gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome Length = 135599 Score = 289 bits (146), Expect = 5e-75 Identities = 265/302 (87%), Gaps = 2/302 (0%) Strand = Plus / Minus Query: 80 agccgtagcgaaagcgagtcttaatagggcgatt-gtcactgcttatggacccgaacctg 138 |||| |||||||||||||| | |||| ||| || |||||| |||| |||||||||| | Sbjct: 114797 agccctagcgaaagcgagtttgtatagagcgttttgtcactatttatagacccgaacccg 114738 Query: 139 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 198 ||||||||| ||||| ||||| |||||||||| | |||||||| |||| |||||| || Sbjct: 114737 ggtgatctaaccatggccagggtgaagcttgggtaaaactaagtggaggcccgaactgat 114678 Query: 199 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 258 | |||||||| ||| | ||||||||||||||||||||||||||||||| |||||||| || Sbjct: 114677 taatgttgaaaaattaccggatgagttgtggttaggggtgaaatgccaatcgaacccgga 114618 Query: 259 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggt 317 ||||||||||||||||||||||| ||||||||||||| ||||| | | | ||||||| Sbjct: 114617 gctagctggttctccccgaaatgtgttgaggcgcagcggttgagattataacttaggggt 114558 Query: 318 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 377 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 114557 aaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 114498 Query: 378 ta 379 || Sbjct: 114497 ta 114496 Score = 289 bits (146), Expect = 5e-75 Identities = 265/302 (87%), Gaps = 2/302 (0%) Strand = Plus / Plus Query: 80 agccgtagcgaaagcgagtcttaatagggcgatt-gtcactgcttatggacccgaacctg 138 |||| |||||||||||||| | |||| ||| || |||||| |||| |||||||||| | Sbjct: 2720 agccctagcgaaagcgagtttgtatagagcgttttgtcactatttatagacccgaacccg 2779 Query: 139 ggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgac 198 ||||||||| ||||| ||||| |||||||||| | |||||||| |||| |||||| || Sbjct: 2780 ggtgatctaaccatggccagggtgaagcttgggtaaaactaagtggaggcccgaactgat 2839 Query: 199 tgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccaga 258 | |||||||| ||| | ||||||||||||||||||||||||||||||| |||||||| || Sbjct: 2840 taatgttgaaaaattaccggatgagttgtggttaggggtgaaatgccaatcgaacccgga 2899 Query: 259 gctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggt 317 ||||||||||||||||||||||| ||||||||||||| ||||| | | | ||||||| Sbjct: 2900 gctagctggttctccccgaaatgtgttgaggcgcagcggttgagattataacttaggggt 2959 Query: 318 aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 377 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2960 aaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 3019 Query: 378 ta 379 || Sbjct: 3020 ta 3021 Score = 163 bits (82), Expect = 8e-37 Identities = 154/178 (86%) Strand = Plus / Minus Query: 413 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 472 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 114483 gccagttagacagtgggggataagctccattgtcaagagggaaacagcccagaccaccag 114424 Query: 473 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 532 |||||||||||||| ||| |||| |||||||||||| |||| ||||| |||||| Sbjct: 114423 ttaaggcccctaaatagtagctaagtggcaaaggaggtgggagtgcttagacaaccagga 114364 Query: 533 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 590 |||||||||||||||||| | |||||||||||||||||||||||||||| || ||||| Sbjct: 114363 ggtttgcctagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgc 114306 Score = 163 bits (82), Expect = 8e-37 Identities = 154/178 (86%) Strand = Plus / Plus Query: 413 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 472 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 3034 gccagttagacagtgggggataagctccattgtcaagagggaaacagcccagaccaccag 3093 Query: 473 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 532 |||||||||||||| ||| |||| |||||||||||| |||| ||||| |||||| Sbjct: 3094 ttaaggcccctaaatagtagctaagtggcaaaggaggtgggagtgcttagacaaccagga 3153 Query: 533 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 590 |||||||||||||||||| | |||||||||||||||||||||||||||| || ||||| Sbjct: 3154 ggtttgcctagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgc 3211 Score = 69.9 bits (35), Expect = 9e-09 Identities = 41/43 (95%) Strand = Plus / Minus Query: 10 gcgtgcctgttgaagaatgagccggcgactcataggcagtggc 52 |||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 114863 gcgtgcctgttgaagaatgagccggcgacttataggtagtggc 114821 Score = 69.9 bits (35), Expect = 9e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 10 gcgtgcctgttgaagaatgagccggcgactcataggcagtggc 52 |||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 2654 gcgtgcctgttgaagaatgagccggcgacttataggtagtggc 2696
>gb|L42845.1|FRICPRGOL Friedmannia israeliensis large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2704 Score = 287 bits (145), Expect = 2e-74 Identities = 240/271 (88%), Gaps = 3/271 (1%) Strand = Plus / Plus Query: 114 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 173 |||||| |||||||||||||||| |||||||||| ||||| |||||||||||||||| | Sbjct: 680 gtcacttcttatggacccgaacccgggtgatctaaccatggccaggatgaagcttgggta 739 Query: 174 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 233 |||| ||| || |||||||||||| ||||||||| |||| ||||||||| ||||||||| Sbjct: 740 aaaccaagtggaagtccgaaccgaccgatgttgaaaaatcggcggatgagctgtggttag 799 Query: 234 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 293 ||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 800 gggtgaaatgccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgca 859 Query: 294 gcagt---tgactggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcgg 350 || || ||| || ||||||||||||||||||||||||||||||||||| |||||| Sbjct: 860 gcggttaatgatgggcggtctaggggtaaagcactgtttcggtgcgggctgcgagagcgg 919 Query: 351 taccaaatcgaggcaaactctgaatactaga 381 |||||||||| ||||||| |||||||||| Sbjct: 920 taccaaatcgtagcaaactaagaatactaga 950 Score = 240 bits (121), Expect = 4e-60 Identities = 169/185 (91%) Strand = Plus / Plus Query: 414 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 473 ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 966 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcaccagc 1025 Query: 474 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 533 ||||||||||||||||||||| |||| ||||||||||| | ||| | ||| ||||||| Sbjct: 1026 taaggcccctaaatgaccgctaagtggtaaaggaggtgagaatgctgaaacaaccaggag 1085 Query: 534 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 593 |||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct: 1086 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtggagcgttct 1145 Query: 594 tgcgc 598 ||||| Sbjct: 1146 tgcgc 1150 Score = 83.8 bits (42), Expect = 6e-13 Identities = 53/57 (92%) Strand = Plus / Plus Query: 4 ctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 ||| |||||||||||||||||||||||||||||||| ||| | |||||||||||||| Sbjct: 571 ctgaccgcgtgcctgttgaagaatgagccggcgacttataaggagtggcttggttaa 627
>gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2632 Score = 283 bits (143), Expect = 3e-73 Identities = 266/305 (87%), Gaps = 4/305 (1%) Strand = Plus / Plus Query: 80 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 139 ||||||||||||||||||||| |||||||||| |||||| |||| |||||||||| || Sbjct: 636 agccgtagcgaaagcgagtctgaatagggcgac-gtcactttttatagacccgaacccgg 694 Query: 140 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 199 |||||||| ||||| |||||||||||||||| | | | ||| ||||||||||||||| Sbjct: 695 gtgatctaaccatggccaggatgaagcttgggtaacaacaagtggaggtccgaaccgacc 754 Query: 200 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 259 ||||||||| |||| ||||||||| |||||||||||||||||| ||| |||||| | ||| Sbjct: 755 gatgttgaaaaatcggcggatgagctgtggttaggggtgaaataccaatcgaactcggag 814 Query: 260 ctagctggttctccccgaaatgcgttgaggcgcagcagt---tgactggacatctagggg 316 |||||||||||||||||||||||||||||||||||| || ||| || |||||||| Sbjct: 815 ctagctggttctccccgaaatgcgttgaggcgcagcggtaaatgatgggctgtctagggg 874 Query: 317 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 376 |||||| |||||||||||||||||||| ||||||||||||||| |||||||| ||||| Sbjct: 875 taaagctctgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaata 934 Query: 377 ctaga 381 ||||| Sbjct: 935 ctaga 939 Score = 198 bits (100), Expect = 1e-47 Identities = 151/168 (89%) Strand = Plus / Plus Query: 414 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 473 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || || |||| Sbjct: 957 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagc 1016 Query: 474 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 533 ||||||||||||||| ||||| |||| |||||||||| | ||| | ||| ||||||| Sbjct: 1017 taaggcccctaaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccaggag 1076 Query: 534 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 581 |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1077 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactg 1124 Score = 95.6 bits (48), Expect = 2e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 ||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 560 ctctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttggttaa 618
>gb|L42992.1|TESCPRGOL Tetraselmis carteriiformis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2552 Score = 283 bits (143), Expect = 3e-73 Identities = 260/297 (87%), Gaps = 4/297 (1%) Strand = Plus / Plus Query: 86 agcgaaagcgagtcttaa-tagggcgattgtcactgcttatggacccgaacctgggtgat 144 ||||||||||||||| || || |||| | |||| | |||||||||||||||||||||||| Sbjct: 620 agcgaaagcgagtctgaaatacggcgctcgtcatttcttatggacccgaacctgggtgat 679 Query: 145 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 204 ||| ||||||||||| |||||||||| | |||| ||| || | ||||||| |||||||| Sbjct: 680 ctaaccatgaccagggtgaagcttgggtaaaaccaagtggaagcccgaacccactgatgt 739 Query: 205 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 264 |||| |||||| ||||||||||||||||| |||||||||||| |||||| |||||||||| Sbjct: 740 tgaaaaatcaggggatgagttgtggttagcggtgaaatgccaatcgaactcagagctagc 799 Query: 265 tggttctccccgaaatgcgttgaggcgcagc---agttgactggacatctaggggtaaag 321 ||| ||||||||||||||||||||||||||| ||||| || | || |||||||||| Sbjct: 800 tggatctccccgaaatgcgttgaggcgcagcggttgttgatgggtcgtcaaggggtaaag 859 Query: 322 cactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 378 |||||||||||||||||||||| ||||||||||||||| |||||||| ||||||| Sbjct: 860 cactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaatact 916 Score = 174 bits (88), Expect = 2e-40 Identities = 148/168 (88%) Strand = Plus / Plus Query: 414 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 473 |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 935 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcatcagc 994 Query: 474 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 533 |||||||||||||| | || |||| |||||||||| | ||| ||||| |||| || Sbjct: 995 taaggcccctaaataatttctaagtgggaaaggaggtgagaatgctgagacaaccagaag 1054 Query: 534 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 581 |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1055 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactg 1102 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 8 ccgcgtgcctgttgaagaatgagccggcgactcatagg 45 |||||| ||||||||||||||| ||||||||| ||||| Sbjct: 546 ccgcgttcctgttgaagaatgaaccggcgacttatagg 583
>gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; chloroplast genes for chloroplast products Length = 5057 Score = 283 bits (143), Expect = 3e-73 Identities = 266/305 (87%), Gaps = 4/305 (1%) Strand = Plus / Plus Query: 80 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 139 ||||||||||||||||||||| |||||||||| |||||| |||| |||||||||| || Sbjct: 2518 agccgtagcgaaagcgagtctgaatagggcgac-gtcactttttatagacccgaacccgg 2576 Query: 140 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 199 |||||||| ||||| |||||||||||||||| | | | ||| ||||||||||||||| Sbjct: 2577 gtgatctaaccatggccaggatgaagcttgggtaacaacaagtggaggtccgaaccgacc 2636 Query: 200 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 259 ||||||||| |||| ||||||||| |||||||||||||||||| ||| |||||| | ||| Sbjct: 2637 gatgttgaaaaatcggcggatgagctgtggttaggggtgaaataccaatcgaactcggag 2696 Query: 260 ctagctggttctccccgaaatgcgttgaggcgcagcagt---tgactggacatctagggg 316 |||||||||||||||||||||||||||||||||||| || ||| || |||||||| Sbjct: 2697 ctagctggttctccccgaaatgcgttgaggcgcagcggtaaatgatgggctgtctagggg 2756 Query: 317 taaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaata 376 |||||| |||||||||||||||||||| ||||||||||||||| |||||||| ||||| Sbjct: 2757 taaagctctgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaata 2816 Query: 377 ctaga 381 ||||| Sbjct: 2817 ctaga 2821 Score = 198 bits (100), Expect = 1e-47 Identities = 151/168 (89%) Strand = Plus / Plus Query: 414 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 473 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || || |||| Sbjct: 2839 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagc 2898 Query: 474 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 533 ||||||||||||||| ||||| |||| |||||||||| | ||| | ||| ||||||| Sbjct: 2899 taaggcccctaaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccaggag 2958 Query: 534 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 581 |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 2959 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactg 3006 Score = 95.6 bits (48), Expect = 2e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 60 ||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||| Sbjct: 2442 ctctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttggttaa 2500
>emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene and ITS1, strain SAG 43.94 Length = 4290 Score = 283 bits (143), Expect = 3e-73 Identities = 260/299 (86%) Strand = Plus / Plus Query: 80 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 139 |||| |||||||||||||||| | |||||| | |||||| |||| |||||||||| || Sbjct: 2192 agccatagcgaaagcgagtctgataagggcgttagtcactatttatagacccgaacccgg 2251 Query: 140 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 199 ||||||| |||| |||||||||||||| | | | ||| || |||||||||||||||| Sbjct: 2252 atgatctagtcatggccaggatgaagcttaggtaacactgagtggaggtccgaaccgact 2311 Query: 200 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 259 ||||||||| ||||||||||||||||||| ||||||||||||||||| ||||| || ||| Sbjct: 2312 gatgttgaaaaatcagcggatgagttgtgattaggggtgaaatgccaatcgaatccggag 2371 Query: 260 ctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaa 319 |||||||||||||||||||||||||||||||||||| ||| | | | | ||||||| Sbjct: 2372 ctagctggttctccccgaaatgcgttgaggcgcagcggttaaatttaagcttgggggtaa 2431 Query: 320 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 378 |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| Sbjct: 2432 agcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgcaaactctgaatact 2490 Score = 206 bits (104), Expect = 6e-50 Identities = 152/168 (90%) Strand = Plus / Plus Query: 414 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 473 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 2505 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 2564 Query: 474 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 533 |||||||||||||| | ||| |||||||||||||||||| |||| ||||| ||||||| Sbjct: 2565 taaggcccctaaataattgctaagtgataaaggaggtgggaatgcatagacaaccaggag 2624 Query: 534 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 581 |||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 2625 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactg 2672 Score = 69.9 bits (35), Expect = 9e-09 Identities = 46/50 (92%) Strand = Plus / Plus Query: 3 tctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 52 |||| || ||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 2121 tctgacctcgtgcctgttgaagaatgagccggcgacttataggtagtggc 2170
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 281 bits (142), Expect = 1e-72 Identities = 254/290 (87%), Gaps = 1/290 (0%) Strand = Plus / Plus Query: 89 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 148 |||| ||||||| |||||||||| ||||| |||| |||||||||| |||||||||| Sbjct: 262 gaaaccgagtctgaatagggcgaaagtcacattttatagacccgaacccgggtgatctaa 321 Query: 149 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 208 ||||| |||||||||||||||| | | || ||| ||||||||||||||||||||||||| Sbjct: 322 ccatgtccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaa 381 Query: 209 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 268 |||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||| Sbjct: 382 aaatcagcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagctggt 441 Query: 269 tctccccgaaatgcgttgaggcgcagcagttgactggacatctag-gggtaaagcactgt 327 ||||||||||||| ||| ||||||||| || | |||||| |||||||||||||| Sbjct: 442 tctccccgaaatgtgtttaggcgcagcggtaacgattaaatctagggggtaaagcactgt 501 Query: 328 ttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 377 |||||||||||||||| |||||||||||||||||| ||||||| |||||| Sbjct: 502 ttcggtgcgggctgcgagagcggtaccaaatcgagacaaactcagaatac 551 Score = 192 bits (97), Expect = 9e-46 Identities = 151/169 (89%) Strand = Plus / Plus Query: 413 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 472 |||||| ||||| || |||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 566 gccagtaagacggtgagggataagctccatcgtcgagagggaaacagcccagaccaccag 625 Query: 473 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 532 |||||| ||| ||||| ||| |||||||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtcccaaaatggatgctaagtgataaaggaggtgggattgcagagacaaccagga 685 Query: 533 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 581 |||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactg 734 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 12 gtgcctgttgaagaatgagccggcgactcatagg 45 |||||||||||||||||||||||||||| ||||| Sbjct: 191 gtgcctgttgaagaatgagccggcgacttatagg 224
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 281 bits (142), Expect = 1e-72 Identities = 230/258 (89%), Gaps = 1/258 (0%) Strand = Plus / Plus Query: 127 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 186 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 674 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgacaccaagtgaag 733 Query: 187 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 246 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 734 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 793 Query: 247 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 305 |||||| | ||||||||||||||||||||||||||||||||||||||| ||| | || Sbjct: 794 gtcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtttataagg 853 Query: 306 acatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 365 | ||||||||||||||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 854 ctgtttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggca 913 Query: 366 aactctgaatactagata 383 |||||||||||||||||| Sbjct: 914 aactctgaatactagata 931 Score = 210 bits (106), Expect = 4e-51 Identities = 166/186 (89%) Strand = Plus / Plus Query: 413 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 472 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactag 1003 Query: 473 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 532 |||||||||| |||||| || | ||||| |||||||||| | |||| | ||| |||||| Sbjct: 1004 ctaaggccccaaaatgatcgttaagtgacaaaggaggtgagaatgcagaaacaaccagga 1063 Query: 533 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 592 ||||||| |||||||||||| |||||||||||||||||||||||||||| | ||||| | Sbjct: 1064 ggtttgcttagaagcagccatcctttaaagagtgcgtaatagctcactggtggagcgttc 1123 Query: 593 ttgcgc 598 |||||| Sbjct: 1124 ttgcgc 1129 Score = 65.9 bits (33), Expect = 1e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 4 ctgnccgcgtgcctgttgaagaatgagccggcgact 39 ||| |||||||||||||||||||||||||||||||| Sbjct: 554 ctgaccgcgtgcctgttgaagaatgagccggcgact 589
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 281 bits (142), Expect = 1e-72 Identities = 230/258 (89%), Gaps = 1/258 (0%) Strand = Plus / Plus Query: 127 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 186 |||||||||| |||||||||| |||||||||||||||||||||| ||| || ||| || Sbjct: 25483 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtgacaccaagtgaag 25542 Query: 187 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 246 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 25543 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 25602 Query: 247 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga-ctgg 305 |||||| | ||||||||||||||||||||||||||||||||||||||| ||| | || Sbjct: 25603 gtcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtttataagg 25662 Query: 306 acatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggca 365 | ||||||||||||||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 25663 ctgtttaggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggca 25722 Query: 366 aactctgaatactagata 383 |||||||||||||||||| Sbjct: 25723 aactctgaatactagata 25740 Score = 210 bits (106), Expect = 4e-51 Identities = 166/186 (89%) Strand = Plus / Plus Query: 413 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 472 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 25753 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactag 25812 Query: 473 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 532 |||||||||| |||||| || | ||||| |||||||||| | |||| | ||| |||||| Sbjct: 25813 ctaaggccccaaaatgatcgttaagtgacaaaggaggtgagaatgcagaaacaaccagga 25872 Query: 533 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 592 ||||||| |||||||||||| |||||||||||||||||||||||||||| | ||||| | Sbjct: 25873 ggtttgcttagaagcagccatcctttaaagagtgcgtaatagctcactggtggagcgttc 25932 Query: 593 ttgcgc 598 |||||| Sbjct: 25933 ttgcgc 25938 Score = 65.9 bits (33), Expect = 1e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 4 ctgnccgcgtgcctgttgaagaatgagccggcgact 39 ||| |||||||||||||||||||||||||||||||| Sbjct: 25363 ctgaccgcgtgcctgttgaagaatgagccggcgact 25398
>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome Length = 191952 Score = 281 bits (142), Expect = 1e-72 Identities = 254/290 (87%), Gaps = 1/290 (0%) Strand = Plus / Plus Query: 89 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 148 ||||||||| | ||||| ||| | |||||| |||| |||||||||| || ||||||| Sbjct: 189567 gaaagcgagcttgaatagagcgttagtcactatttatagacccgaacccggatgatctag 189626 Query: 149 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 208 ||||| ||||| |||||||| | | | |||||| ||||||||||||||||||||||||| Sbjct: 189627 ccatggccagggtgaagcttaggtaacactaagtggaggtccgaaccgactgatgttgaa 189686 Query: 209 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 268 |||||||||||||||||||| |||||||||||||||| ||||| || |||||||||||| Sbjct: 189687 aaatcagcggatgagttgtggctaggggtgaaatgccaatcgaatccggagctagctggt 189746 Query: 269 tctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggtaaagcactgt 327 ||||||||||||| ||||||||||||| ||||| ||| | ||||||||||||||| Sbjct: 189747 tctccccgaaatgtgttgaggcgcagcggttgatgcttaatcttgggggtaaagcactgt 189806 Query: 328 ttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 377 |||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 189807 ttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 189856 Score = 281 bits (142), Expect = 1e-72 Identities = 254/290 (87%), Gaps = 1/290 (0%) Strand = Plus / Plus Query: 89 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 148 ||||||||| | ||||| ||| | |||||| |||| |||||||||| || ||||||| Sbjct: 150994 gaaagcgagcttgaatagagcgttagtcactatttatagacccgaacccggatgatctag 151053 Query: 149 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 208 ||||| ||||| |||||||| | | | |||||| ||||||||||||||||||||||||| Sbjct: 151054 ccatggccagggtgaagcttaggtaacactaagtggaggtccgaaccgactgatgttgaa 151113 Query: 209 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 268 |||||||||||||||||||| |||||||||||||||| ||||| || |||||||||||| Sbjct: 151114 aaatcagcggatgagttgtggctaggggtgaaatgccaatcgaatccggagctagctggt 151173 Query: 269 tctccccgaaatgcgttgaggcgcagcagttgactggacatc-taggggtaaagcactgt 327 ||||||||||||| ||||||||||||| ||||| ||| | ||||||||||||||| Sbjct: 151174 tctccccgaaatgtgttgaggcgcagcggttgatgcttaatcttgggggtaaagcactgt 151233 Query: 328 ttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 377 |||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 151234 ttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatac 151283 Score = 190 bits (96), Expect = 4e-45 Identities = 150/168 (89%) Strand = Plus / Plus Query: 414 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 473 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 189872 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 189931 Query: 474 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 533 |||||||||||||| | ||| |||| |||||||||||| |||| ||||| ||||||| Sbjct: 189932 taaggcccctaaataattgctaagtggcaaaggaggtgggaatgcatagacaaccaggag 189991 Query: 534 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 581 |||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 189992 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactg 190039 Score = 190 bits (96), Expect = 4e-45 Identities = 150/168 (89%) Strand = Plus / Plus Query: 414 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 473 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 151299 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 151358 Query: 474 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 533 |||||||||||||| | ||| |||| |||||||||||| |||| ||||| ||||||| Sbjct: 151359 taaggcccctaaataattgctaagtggcaaaggaggtgggaatgcatagacaaccaggag 151418 Query: 534 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 581 |||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 151419 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactg 151466 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 11 cgtgcctgttgaagaatgagccggcgactcatag 44 ||||| ||||||||||||||||||||||| |||| Sbjct: 189494 cgtgcatgttgaagaatgagccggcgacttatag 189527 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 11 cgtgcctgttgaagaatgagccggcgactcatag 44 ||||| ||||||||||||||||||||||| |||| Sbjct: 150921 cgtgcatgttgaagaatgagccggcgacttatag 150954
>dbj|AP002845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0482C06 Length = 182779 Score = 278 bits (140), Expect = 2e-71 Identities = 164/172 (95%), Gaps = 5/172 (2%) Strand = Plus / Plus Query: 434 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 493 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 167952 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 168011 Query: 494 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 553 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 168012 tcagtgataaaggaggtgggggtgcaaagac-----ggaggtttgcctaaaagcagccac 168066 Query: 554 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 605 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 168067 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 168118
>dbj|AP002882.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439B06 Length = 135991 Score = 278 bits (140), Expect = 2e-71 Identities = 164/172 (95%), Gaps = 5/172 (2%) Strand = Plus / Plus Query: 434 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 493 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 2356 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 2415 Query: 494 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 553 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 2416 tcagtgataaaggaggtgggggtgcaaagac-----ggaggtttgcctaaaagcagccac 2470 Query: 554 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 605 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2471 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 2522
>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome Length = 191028 Score = 274 bits (138), Expect = 3e-70 Identities = 256/293 (87%), Gaps = 3/293 (1%) Strand = Plus / Plus Query: 89 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 148 ||||||||| | ||||| ||| | |||||| |||| |||||||||| || ||||||| Sbjct: 188644 gaaagcgagcttgaatagagcgttggtcactatttatagacccgaacccggatgatctag 188703 Query: 149 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 208 ||||| ||||| |||||||| | | | |||||| |||||||||||||||| |||||||| Sbjct: 188704 ccatggccagggtgaagcttaggtaacactaagtggaggtccgaaccgactaatgttgaa 188763 Query: 209 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 268 ||| |||||||||||||||| |||||||||||||||| ||||| || |||||||||||| Sbjct: 188764 aaattagcggatgagttgtggctaggggtgaaatgccaatcgaatccggagctagctggt 188823 Query: 269 tctccccgaaatgcgttgaggcgcagcagttga--ctggacatctaggggtaaagcactg 326 ||||||||||||| ||||||||||||| ||||| || | | |||||||||||||||| Sbjct: 188824 tctccccgaaatgtgttgaggcgcagcggttgatgct-taaacttaggggtaaagcactg 188882 Query: 327 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 379 ||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 188883 tttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatacta 188935 Score = 266 bits (134), Expect = 8e-68 Identities = 255/293 (87%), Gaps = 3/293 (1%) Strand = Plus / Plus Query: 89 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 148 ||||||||| | ||||| ||| | |||||| |||| |||||||||| || ||||||| Sbjct: 150201 gaaagcgagcttgaatagagcgttggtcactatttatagacccgaacccggatgatctag 150260 Query: 149 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 208 ||||| ||||| |||||||| | | | |||||| ||||||||| |||||| |||||||| Sbjct: 150261 ccatggccagggtgaagcttaggtaacactaagtggaggtccgagccgactaatgttgaa 150320 Query: 209 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 268 ||| |||||||||||||||| |||||||||||||||| ||||| || |||||||||||| Sbjct: 150321 aaattagcggatgagttgtggctaggggtgaaatgccaatcgaatccggagctagctggt 150380 Query: 269 tctccccgaaatgcgttgaggcgcagcagttga--ctggacatctaggggtaaagcactg 326 ||||||||||||| ||||||||||||| ||||| || | | |||||||||||||||| Sbjct: 150381 tctccccgaaatgtgttgaggcgcagcggttgatgct-taaacttaggggtaaagcactg 150439 Query: 327 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 379 ||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 150440 tttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatacta 150492 Score = 163 bits (82), Expect = 8e-37 Identities = 145/166 (87%) Strand = Plus / Plus Query: 416 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 475 |||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||||| Sbjct: 188951 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagcta 189010 Query: 476 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 535 ||||||| |||| | || |||| |||||||||||| |||| ||||| ||||||||| Sbjct: 189011 aggccccaaaataattactaagtggcaaaggaggtgggaatgcatagacaaccaggaggt 189070 Query: 536 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 581 |||| |||||||||| | |||||||||||||||||||||||||||| Sbjct: 189071 ttgcttagaagcagcaatcctttaaagagtgcgtaatagctcactg 189116 Score = 163 bits (82), Expect = 8e-37 Identities = 145/166 (87%) Strand = Plus / Plus Query: 416 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 475 |||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||||| Sbjct: 150508 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagcta 150567 Query: 476 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 535 ||||||| |||| | || |||| |||||||||||| |||| ||||| ||||||||| Sbjct: 150568 aggccccaaaataattactaagtggcaaaggaggtgggaatgcatagacaaccaggaggt 150627 Query: 536 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 581 |||| |||||||||| | |||||||||||||||||||||||||||| Sbjct: 150628 ttgcttagaagcagcaatcctttaaagagtgcgtaatagctcactg 150673 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 11 cgtgcctgttgaagaatgagccggcgactcataggcagtggc 52 ||||| ||||||||||||||||||||||| ||| | |||||| Sbjct: 150128 cgtgcatgttgaagaatgagccggcgacttataagtagtggc 150169 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 12 gtgcctgttgaagaatgagccggcgactcataggcagtggc 52 |||| ||||||||||||||||||||||| ||| | |||||| Sbjct: 188572 gtgcatgttgaagaatgagccggcgacttataagtagtggc 188612
>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity inducing protein, complete cds Length = 2303 Score = 274 bits (138), Expect = 3e-70 Identities = 177/189 (93%), Gaps = 6/189 (3%) Strand = Plus / Minus Query: 2 ctctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 61 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 183 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 124 Query: 62 ggaacggaacccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgc 121 ||||| ||||||| |||||||||||||||||||||| ||||||| ||||||||||| Sbjct: 123 ggaac-----ccaccgg-agccgtagcgaaagcgagtcttcatagggcaattgtcactgc 70 Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 69 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgggtgaaactaag 10 Query: 182 cagaggtcc 190 ||||||| Sbjct: 9 tggaggtcc 1
>gb|L44126.1|SFFCPRGOL Scherffelia dubia chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3334 Score = 272 bits (137), Expect = 1e-69 Identities = 231/260 (88%), Gaps = 3/260 (1%) Strand = Plus / Plus Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 |||| |||||||||||| |||||||| |||||||||||||||||||||| | |||| ||| Sbjct: 687 ttatagacccgaacctgagtgatctaaccatgaccaggatgaagcttgggtaaaaccaag 746 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 747 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 806 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 ||||| |||||| ||||||||||||| ||||| ||||||||||||||||||||| |||| Sbjct: 807 tgccaatcgaactcagagctagctggatctcctcgaaatgcgttgaggcgcagcggttgt 866 Query: 302 c--tggacatct-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 358 | ||| | | | |||||||||||||||||||| ||||||||| | ||||||||||||| Sbjct: 867 cgatgggcttttaaggggtaaagcactgtttcgatgcgggctgtgaaagcggtaccaaat 926 Query: 359 cgaggcaaactctgaatact 378 || ||||||| ||||||| Sbjct: 927 cgttgcaaactaagaatact 946 Score = 206 bits (104), Expect = 6e-50 Identities = 152/168 (90%) Strand = Plus / Plus Query: 414 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 473 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 965 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 1024 Query: 474 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 533 |||||||||||||| || ||| |||| |||||||||| ||| ||||| ||||||| Sbjct: 1025 taaggcccctaaataacggctaagtgggaaaggaggtgaaaatgctcagacaaccaggag 1084 Query: 534 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 581 |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1085 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactg 1132 Score = 60.0 bits (30), Expect = 9e-06 Identities = 44/49 (89%) Strand = Plus / Plus Query: 4 ctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 52 ||| |||||| ||||||||||||||| ||||||||| ||||| |||||| Sbjct: 570 ctgaccgcgtacctgttgaagaatgaaccggcgacttataggaagtggc 618
>gb|AF393609.1| Scherffelia dubia small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and putative site-specific DNA endonuclease (orf167) gene, complete cds; chloroplast genes for chloroplast products Length = 5476 Score = 272 bits (137), Expect = 1e-69 Identities = 231/260 (88%), Gaps = 3/260 (1%) Strand = Plus / Plus Query: 122 ttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaag 181 |||| |||||||||||| |||||||| |||||||||||||||||||||| | |||| ||| Sbjct: 2425 ttatagacccgaacctgagtgatctaaccatgaccaggatgaagcttgggtaaaaccaag 2484 Query: 182 cagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaa 241 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 2485 tggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtggttaggggtgaaa 2544 Query: 242 tgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttga 301 ||||| |||||| ||||||||||||| ||||| ||||||||||||||||||||| |||| Sbjct: 2545 tgccaatcgaactcagagctagctggatctcctcgaaatgcgttgaggcgcagcggttgt 2604 Query: 302 c--tggacatct-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaat 358 | ||| | | | |||||||||||||||||||| ||||||||| | ||||||||||||| Sbjct: 2605 cgatgggcttttaaggggtaaagcactgtttcgatgcgggctgtgaaagcggtaccaaat 2664 Query: 359 cgaggcaaactctgaatact 378 || ||||||| ||||||| Sbjct: 2665 cgttgcaaactaagaatact 2684 Score = 206 bits (104), Expect = 6e-50 Identities = 152/168 (90%) Strand = Plus / Plus Query: 414 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 473 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 2703 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 2762 Query: 474 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 533 |||||||||||||| || ||| |||| |||||||||| ||| ||||| ||||||| Sbjct: 2763 taaggcccctaaataacggctaagtgggaaaggaggtgaaaatgctcagacaaccaggag 2822 Query: 534 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 581 |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 2823 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactg 2870 Score = 60.0 bits (30), Expect = 9e-06 Identities = 44/49 (89%) Strand = Plus / Plus Query: 4 ctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 52 ||| |||||| ||||||||||||||| ||||||||| ||||| |||||| Sbjct: 2308 ctgaccgcgtacctgttgaagaatgaaccggcgacttataggaagtggc 2356
>emb|BX572100.1| Prochlorococcus marinus MIT9313 complete genome; segment 6/7 Length = 348071 Score = 270 bits (136), Expect = 5e-69 Identities = 193/212 (91%) Strand = Plus / Minus Query: 80 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 139 |||| |||||||||||||||| ||||||||||| |||| || |||| |||||||||| || Sbjct: 5972 agccatagcgaaagcgagtctgaatagggcgatcgtcagtgtttatagacccgaacccgg 5913 Query: 140 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 199 |||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||||| Sbjct: 5912 gtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgact 5853 Query: 200 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 259 ||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| ||| Sbjct: 5852 gatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggag 5793 Query: 260 ctagctggttctccccgaaatgcgttgaggcg 291 ||||||||||||||||||||| |||||||||| Sbjct: 5792 ctagctggttctccccgaaatacgttgaggcg 5761 Score = 151 bits (76), Expect = 3e-33 Identities = 142/164 (86%) Strand = Plus / Minus Query: 426 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 485 ||||||||||||| ||| ||||| ||||||||||||| || | |||||||||| ||| || Sbjct: 5645 tgggggataagctccatagtcgaaagggaaacagcccagaccgccagctaaggtccccaa 5586 Query: 486 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 545 || | | || |||||||||||||||||| ||| ||||| ||||||||||||||||||| Sbjct: 5585 atcaacactaagtgataaaggaggtgggattgcccagacaaccaggaggtttgcctagaa 5526 Query: 546 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 589 ||||||| ||| || |||||||||||||||||||| ||||||| Sbjct: 5525 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcg 5482 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 12 gtgcctgttgaagaatgagccggcgactcataggcagtggc 52 |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 6034 gtgcctgttgaagaatgagccggcgacttataggcactggc 5994 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 327 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 377 ||||||||||||||||| |||||||||| ||||||| |||||||||||| Sbjct: 5723 tttcggtgcgggctgcgagagcggtacctaatcgagatgaactctgaatac 5673
>emb|BX572095.1| Prochlorococcus marinus MIT9313 complete genome; segment 1/7 Length = 349391 Score = 270 bits (136), Expect = 5e-69 Identities = 193/212 (91%) Strand = Plus / Plus Query: 80 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 139 |||| |||||||||||||||| ||||||||||| |||| || |||| |||||||||| || Sbjct: 211800 agccatagcgaaagcgagtctgaatagggcgatcgtcagtgtttatagacccgaacccgg 211859 Query: 140 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 199 |||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||||| Sbjct: 211860 gtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgact 211919 Query: 200 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 259 ||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| ||| Sbjct: 211920 gatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggag 211979 Query: 260 ctagctggttctccccgaaatgcgttgaggcg 291 ||||||||||||||||||||| |||||||||| Sbjct: 211980 ctagctggttctccccgaaatacgttgaggcg 212011 Score = 151 bits (76), Expect = 3e-33 Identities = 142/164 (86%) Strand = Plus / Plus Query: 426 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 485 ||||||||||||| ||| ||||| ||||||||||||| || | |||||||||| ||| || Sbjct: 212127 tgggggataagctccatagtcgaaagggaaacagcccagaccgccagctaaggtccccaa 212186 Query: 486 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 545 || | | || |||||||||||||||||| ||| ||||| ||||||||||||||||||| Sbjct: 212187 atcaacactaagtgataaaggaggtgggattgcccagacaaccaggaggtttgcctagaa 212246 Query: 546 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 589 ||||||| ||| || |||||||||||||||||||| ||||||| Sbjct: 212247 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcg 212290 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 12 gtgcctgttgaagaatgagccggcgactcataggcagtggc 52 |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 211738 gtgcctgttgaagaatgagccggcgacttataggcactggc 211778 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 327 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 377 ||||||||||||||||| |||||||||| ||||||| |||||||||||| Sbjct: 212049 tttcggtgcgggctgcgagagcggtacctaatcgagatgaactctgaatac 212099
>gb|DQ312949.1| Uncultured bacterium clone 3M6B 23S ribosomal RNA gene, partial sequence Length = 806 Score = 270 bits (136), Expect = 5e-69 Identities = 193/212 (91%) Strand = Plus / Plus Query: 80 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 139 |||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| || Sbjct: 487 agccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaacccgg 546 Query: 140 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 199 |||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||||| Sbjct: 547 gtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgact 606 Query: 200 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 259 ||||||||| |||||||||||||| |||||||||||||||||||||| |||||||| ||| Sbjct: 607 gatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggag 666 Query: 260 ctagctggttctccccgaaatgcgttgaggcg 291 ||||||||||||||||||||| |||||||||| Sbjct: 667 ctagctggttctccccgaaatacgttgaggcg 698 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 327 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 377 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 12 gtgcctgttgaagaatgagccggcgactcataggcagtggc 52 |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 425 gtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 268 bits (135), Expect = 2e-68 Identities = 260/300 (86%), Gaps = 5/300 (1%) Strand = Plus / Plus Query: 86 agcgaaagcgagtcttaatagggcga--ttgtcactgcttatggacccgaacctgggtga 143 ||||||||| ||||| |||||||| | | |||||| ||| ||||||||||| |||||| Sbjct: 616 agcgaaagcaagtctgaatagggcaaaatcgtcactttttagggacccgaacccgggtga 675 Query: 144 tctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatg 203 |||| ||||| |||||||||||||||| | |||| ||| ||||||||||||||| |||| Sbjct: 676 tctaaccatggccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatg 735 Query: 204 ttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctag 263 ||||| |||| ||||||||| |||||||||||||||||||||| |||||| | ||||||| Sbjct: 736 ttgaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaactcggagctag 795 Query: 264 ctggttctccccgaaatgcgttgaggcgcagcagtt---gactggacatctaggggtaaa 320 |||||||||||||||||||||||||||||||| ||| ||| || |||||||||||| Sbjct: 796 ctggttctccccgaaatgcgttgaggcgcagcggttggcgacgggctgtctaggggtaaa 855 Query: 321 gcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 380 |||||||||||||||||||| || || |||||||||||| ||||||| ||||||||| Sbjct: 856 gcactgtttcggtgcgggctacgaaagtggtaccaaatcgtagcaaactaagaatactag 915 Score = 200 bits (101), Expect = 4e-48 Identities = 164/185 (88%) Strand = Plus / Plus Query: 414 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 473 |||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||| |||| Sbjct: 933 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcatcagc 992 Query: 474 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 533 ||||||||| |||| ||||| |||| ||||||||||| | |||| | ||||||||||| Sbjct: 993 taaggccccagaatggccgctaagtggtaaaggaggtgagaatgcagaaacagccaggag 1052 Query: 534 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 593 |||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct: 1053 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtggagcgttct 1112 Query: 594 tgcgc 598 ||||| Sbjct: 1113 tgcgc 1117 Score = 91.7 bits (46), Expect = 3e-15 Identities = 57/61 (93%) Strand = Plus / Plus Query: 3 tctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 62 |||| ||||||||||||||||||||||||||||||||| || | |||||||||||||||| Sbjct: 538 tctgaccgcgtgcctgttgaagaatgagccggcgactcctaagaagtggcttggttaagg 597 Query: 63 g 63 | Sbjct: 598 g 598
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 266 bits (134), Expect = 8e-68 Identities = 255/292 (87%), Gaps = 5/292 (1%) Strand = Plus / Plus Query: 89 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 148 |||| ||||||| || |||||||| ||| || |||| |||||||||| ||||||||| Sbjct: 262 gaaaccgagtctgaaaagggcgataatcagtgtttatagacccgaaccctggtgatctaa 321 Query: 149 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 208 ||||| |||||||||||||||| | | || ||| ||||||||||||||||||||||||| Sbjct: 322 ccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaa 381 Query: 209 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 268 ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 382 aaatcagcggatgagttgtggttaggggtgaaatgccaatcgaaccaggagctagctggt 441 Query: 269 tctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag-gggtaaagcact 325 ||||||||||||| ||| ||||||||| || ||| | | |||| | |||||||||||| Sbjct: 442 tctccccgaaatgtgtttaggcgcagcggtaatgatt--atatctggggggtaaagcact 499 Query: 326 gtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 377 |||||||||||||||| | || ||||||||||||||| |||||||||||||| Sbjct: 500 gtttcggtgcgggctgggagaccggtaccaaatcgagacaaactctgaatac 551 Score = 198 bits (100), Expect = 1e-47 Identities = 151/168 (89%) Strand = Plus / Plus Query: 413 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 472 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 473 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 532 |||||| ||| |||| | |||| |||||||||||||||| | ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagagtgcacagacaactagga 685 Query: 533 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcact 580 ||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcact 733 Score = 75.8 bits (38), Expect = 1e-10 Identities = 43/45 (95%) Strand = Plus / Plus Query: 3 tctgnccgcgtgcctgttgaagaatgagccggcgactcataggca 47 |||| |||||||||||||||||||||||||||||||| ||||||| Sbjct: 182 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggca 226
>gb|AC157348.25| Medicago truncatula clone mth2-133e20, complete sequence Length = 115475 Score = 264 bits (133), Expect = 3e-67 Identities = 157/165 (95%) Strand = Plus / Minus Query: 441 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 500 |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 115474 atcgtcgagagggaaacagcccagatcaccagctaaggcccctaaatgatcgctcagtga 115415 Query: 501 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 560 |||||||||| || ||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 115414 taaaggaggtaggagtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 115355 Query: 561 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 605 |||||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 115354 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagat 115310
>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome Length = 151933 Score = 262 bits (132), Expect = 1e-66 Identities = 257/298 (86%), Gaps = 3/298 (1%) Strand = Plus / Plus Query: 86 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 145 ||||||||| ||||| ||||||||| |||||||| |||||||||||||||| |||||||| Sbjct: 137128 agcgaaagcaagtctgaatagggcgtttgtcacttcttatggacccgaacccgggtgatc 137187 Query: 146 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 205 || |||||||||||||||||||||| | |||| ||| || | |||||||||| |||||| Sbjct: 137188 taaccatgaccaggatgaagcttgggtaaaaccaagtggaagaccgaaccgaccgatgtt 137247 Query: 206 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 265 ||| |||| |||||||||||||||||||||| ||||| | | |||||| | ||||||||| Sbjct: 137248 gaaaaatcggcggatgagttgtggttaggggagaaattctaatcgaactcggagctagct 137307 Query: 266 ggttctccccgaaatgcgttgaggcgcagcagtt---gactggacatctaggggtaaagc 322 ||||||| ||||||| ||||||||||||| ||| ||| || |||||||||||||| Sbjct: 137308 ggttctcttcgaaatgtgttgaggcgcagcggttggcgacgggctgtctaggggtaaagc 137367 Query: 323 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 380 ||||||||||||||||||| | | |||||||||||| |||||||| ||||||||| Sbjct: 137368 actgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaactcagaatactag 137425 Score = 262 bits (132), Expect = 1e-66 Identities = 257/298 (86%), Gaps = 3/298 (1%) Strand = Plus / Minus Query: 86 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 145 ||||||||| ||||| ||||||||| |||||||| |||||||||||||||| |||||||| Sbjct: 48416 agcgaaagcaagtctgaatagggcgtttgtcacttcttatggacccgaacccgggtgatc 48357 Query: 146 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 205 || |||||||||||||||||||||| | |||| ||| || | |||||||||| |||||| Sbjct: 48356 taaccatgaccaggatgaagcttgggtaaaaccaagtggaagaccgaaccgaccgatgtt 48297 Query: 206 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 265 ||| |||| |||||||||||||||||||||| ||||| | | |||||| | ||||||||| Sbjct: 48296 gaaaaatcggcggatgagttgtggttaggggagaaattctaatcgaactcggagctagct 48237 Query: 266 ggttctccccgaaatgcgttgaggcgcagcagtt---gactggacatctaggggtaaagc 322 ||||||| ||||||| ||||||||||||| ||| ||| || |||||||||||||| Sbjct: 48236 ggttctcttcgaaatgtgttgaggcgcagcggttggcgacgggctgtctaggggtaaagc 48177 Query: 323 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 380 ||||||||||||||||||| | | |||||||||||| |||||||| ||||||||| Sbjct: 48176 actgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaactcagaatactag 48119 Score = 192 bits (97), Expect = 9e-46 Identities = 163/185 (88%) Strand = Plus / Plus Query: 414 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 473 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 137442 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 137501 Query: 474 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 533 ||||||||||||||| | ||| |||| |||||| ||| | |||| ||||| |||| || Sbjct: 137502 taaggcccctaaatggcagctaagtggcaaaggatgtgagaatgcagagacaaccagaag 137561 Query: 534 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 593 |||||| |||||||||||| |||| ||||||||||||||||||||||| | ||||| || Sbjct: 137562 gtttgcttagaagcagccatccttaaaagagtgcgtaatagctcactggtagagcgttct 137621 Query: 594 tgcgc 598 ||||| Sbjct: 137622 tgcgc 137626 Score = 192 bits (97), Expect = 9e-46 Identities = 163/185 (88%) Strand = Plus / Minus Query: 414 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 473 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 48102 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 48043 Query: 474 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 533 ||||||||||||||| | ||| |||| |||||| ||| | |||| ||||| |||| || Sbjct: 48042 taaggcccctaaatggcagctaagtggcaaaggatgtgagaatgcagagacaaccagaag 47983 Query: 534 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 593 |||||| |||||||||||| |||| ||||||||||||||||||||||| | ||||| || Sbjct: 47982 gtttgcttagaagcagccatccttaaaagagtgcgtaatagctcactggtagagcgttct 47923 Query: 594 tgcgc 598 ||||| Sbjct: 47922 tgcgc 47918 Score = 77.8 bits (39), Expect = 4e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 8 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 62 |||||| ||||||||||||||||| ||||||| ||||| |||||||||||||||| Sbjct: 137056 ccgcgttcctgttgaagaatgagctggcgacttatagggagtggcttggttaagg 137110 Score = 77.8 bits (39), Expect = 4e-11 Identities = 51/55 (92%) Strand = Plus / Minus Query: 8 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 62 |||||| ||||||||||||||||| ||||||| ||||| |||||||||||||||| Sbjct: 48488 ccgcgttcctgttgaagaatgagctggcgacttatagggagtggcttggttaagg 48434
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome Length = 1751080 Score = 262 bits (132), Expect = 1e-66 Identities = 192/212 (90%) Strand = Plus / Plus Query: 80 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 139 |||| |||||||||||||||||||||||||| |||||| || |||| |||||||||| | Sbjct: 356103 agccatagcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctg 356162 Query: 140 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 199 |||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||||| Sbjct: 356163 gtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgact 356222 Query: 200 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 259 ||||||||| |||||||||||||| |||||||||||||||||||||| ||||||| ||| Sbjct: 356223 gatgttgaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggag 356282 Query: 260 ctagctggttctccccgaaatgcgttgaggcg 291 ||||||||||||||||||||| |||||||||| Sbjct: 356283 ctagctggttctccccgaaatacgttgaggcg 356314 Score = 119 bits (60), Expect = 1e-23 Identities = 138/164 (84%) Strand = Plus / Plus Query: 426 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 485 ||||||||||||| || |||| ||||||||||||| || | |||||||||| ||| || Sbjct: 356430 tgggggataagctccacactcgaaagggaaacagcccagaccgccagctaaggtcccaaa 356489 Query: 486 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 545 || | || |||||||||||||||||| ||| ||||| ||||||||||||| ||||| Sbjct: 356490 atcagtactaagtgataaaggaggtgggattgcttagacaaccaggaggtttgcttagaa 356549 Query: 546 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 589 ||||||| ||| || |||||||||||||||||||| ||||||| Sbjct: 356550 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcg 356593 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 12 gtgcctgttgaagaatgagccggcgactcataggcagtggc 52 |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 356041 gtgcctgttgaagaatgagccggcgacttataggcactggc 356081 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 327 tttcggtgcgggctgcgcgagcggtaccaaatcga 361 ||||||||||||||||| |||||||||||||||| Sbjct: 356352 tttcggtgcgggctgcgaaagcggtaccaaatcga 356386
>gb|L43539.1|CRECPRRNL Chlamydomonas sp. (SAG 66.72) chloroplast large subunit ribosomal RNA (rrnL) gene Length = 5575 Score = 260 bits (131), Expect = 5e-66 Identities = 270/313 (86%), Gaps = 10/313 (3%) Strand = Plus / Plus Query: 80 agccgtagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacccgaa 134 |||| ||||||||||||||||||||||||||||| |||||| | |||||||||||| Sbjct: 766 agccttagcgaaagcgagtcttaatagggcgattaaagagtcacttcctatggacccgaa 825 Query: 135 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 194 || |||||||||| ||||||||||||||||||||| | | || ||| ||||||||||| Sbjct: 826 cccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtccgaac 885 Query: 195 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 254 |||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| |||||| Sbjct: 886 cgaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcgaact 945 Query: 255 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggacatct 311 | ||||||||||| ||||||||||||||||||||||||||| | ||||| | |||| Sbjct: 946 cggagctagctggatctccccgaaatgcgttgaggcgcagc-ggtgactatgagctatct 1004 Query: 312 aggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 370 || |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||||||| Sbjct: 1005 agaggtaaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaaactc 1064 Query: 371 tgaatactagata 383 |||||||||||| Sbjct: 1065 agaatactagata 1077 Score = 75.8 bits (38), Expect = 1e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 448 agagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagga 507 ||||||||||||||| ||||||||||||||||||||||||| | || |||| |||||| Sbjct: 1126 agagggaaacagcccagatcaccagctaaggcccctaaatggtcactaagtggaaaagga 1185 Query: 508 ggtgggggtgcaaagacagccaggaggtttgcctagaa 545 ||| | |||| | ||| ||||||||||||| ||||| Sbjct: 1186 tgtgatgttgcagaaacaaccaggaggtttgcttagaa 1223 Score = 71.9 bits (36), Expect = 2e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 4 ctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 62 ||| ||||||||||||||||||||||||| |||||| ||||| |||||| |||||||| Sbjct: 695 ctgaccgcgtgcctgttgaagaatgagccagcgacttataggaagtggcaaggttaagg 753 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 541 tagaagcagccaccctttaaagagtgcgtaatagctcactg 581 |||||||||| | |||| ||||||||||||||||||||||| Sbjct: 1848 tagaagcagcaagccttaaaagagtgcgtaatagctcactg 1888
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 260 bits (131), Expect = 5e-66 Identities = 258/299 (86%), Gaps = 6/299 (2%) Strand = Plus / Plus Query: 86 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 145 ||||||||||||||| ||||||||| ||||||| ||| |||||||||| |||||||| Sbjct: 635 agcgaaagcgagtctgaatagggcgcatgtcacttgttaaagacccgaacccgggtgatc 694 Query: 146 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 205 || ||||| |||||| ||||||||| |||||| | || |||||||||||| || ||| Sbjct: 695 taaccatggccaggaggaagcttgggtgaaaccttgtggaagtccgaaccgaccgacgtt 754 Query: 206 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 265 ||||| || |||||||||||||||||||||||||||| ||| |||||| | ||||||||| Sbjct: 755 gaagagtcggcggatgagttgtggttaggggtgaaataccagtcgaactcggagctagct 814 Query: 266 ggttctccccgaaatgcgttgaggcgcagcagttga-----ctggaca-tctaggggtaa 319 |||||||||||||||||||||||||||||| || || ||| || ||||||||||| Sbjct: 815 ggttctccccgaaatgcgttgaggcgcagcggtcgattaagatgggcagtctaggggtaa 874 Query: 320 agcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 378 |||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||| Sbjct: 875 agcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaactaagaatact 933 Score = 232 bits (117), Expect = 1e-57 Identities = 171/189 (90%) Strand = Plus / Plus Query: 410 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 469 |||||||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||| Sbjct: 948 tcggccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcac 1007 Query: 470 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 529 ||||||||||||| |||| |||||||||||||||||| ||| | |||| ||||| ||| Sbjct: 1008 cagctaaggccccagaatggccgctcagtgataaaggatgtgagagtgcccagacaacca 1067 Query: 530 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 589 |||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||| Sbjct: 1068 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcg 1127 Query: 590 cccttgcgc 598 | ||||||| Sbjct: 1128 ctcttgcgc 1136 Score = 79.8 bits (40), Expect = 1e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 4 ctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 62 ||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 559 ctgaccgcgtgcctgttgaagaatgagccggcgacttttagcaagtggcttggttaagg 617
>emb|X68923.1|CHCSRRNX1 Chloroplast Chlamydomonas sp. 66.72 rrnL gene, exon 1 Length = 1218 Score = 260 bits (131), Expect = 5e-66 Identities = 270/313 (86%), Gaps = 10/313 (3%) Strand = Plus / Plus Query: 80 agccgtagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacccgaa 134 |||| ||||||||||||||||||||||||||||| |||||| | |||||||||||| Sbjct: 766 agccttagcgaaagcgagtcttaatagggcgattaaagagtcacttcctatggacccgaa 825 Query: 135 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 194 || |||||||||| ||||||||||||||||||||| | | || ||| ||||||||||| Sbjct: 826 cccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtccgaac 885 Query: 195 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 254 |||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| |||||| Sbjct: 886 cgaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcgaact 945 Query: 255 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggacatct 311 | ||||||||||| ||||||||||||||||||||||||||| | ||||| | |||| Sbjct: 946 cggagctagctggatctccccgaaatgcgttgaggcgcagc-ggtgactatgagctatct 1004 Query: 312 aggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 370 || |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||||||| Sbjct: 1005 agaggtaaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaaactc 1064 Query: 371 tgaatactagata 383 |||||||||||| Sbjct: 1065 agaatactagata 1077 Score = 73.8 bits (37), Expect = 6e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 448 agagggaaacagcccggatcaccagctaaggcccctaaatg 488 ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1126 agagggaaacagcccagatcaccagctaaggcccctaaatg 1166 Score = 71.9 bits (36), Expect = 2e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 4 ctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 62 ||| ||||||||||||||||||||||||| |||||| ||||| |||||| |||||||| Sbjct: 695 ctgaccgcgtgcctgttgaagaatgagccagcgacttataggaagtggcaaggttaagg 753
>gb|AY584509.1| Anabaena cylindrica strain UTEX 629 23S ribosomal RNA gene, partial sequence Length = 2389 Score = 258 bits (130), Expect = 2e-65 Identities = 254/292 (86%), Gaps = 5/292 (1%) Strand = Plus / Plus Query: 89 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 148 |||| ||||||| || |||||||| ||| || |||| |||||||||| ||||||||| Sbjct: 262 gaaaccgagtctgaagagggcgataatcagtgtttatagacccgaaccctggtgatctaa 321 Query: 149 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 208 ||||| |||||||||||||||| | | || ||| ||||||||||||||||||||||||| Sbjct: 322 ccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaa 381 Query: 209 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 268 |||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 382 aaatcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagctggt 441 Query: 269 tctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag-gggtaaagcact 325 ||||||||||||| ||| ||||||||| || ||| | | |||| | |||||||||||| Sbjct: 442 tctccccgaaatgtgtttaggcgcagcggtaatgatt--atatctggggggtaaagcact 499 Query: 326 gtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 377 |||||||||||||||| | || ||||||||||||||| |||||||||||||| Sbjct: 500 gtttcggtgcgggctgggagaccggtaccaaatcgagacaaactctgaatac 551 Score = 198 bits (100), Expect = 1e-47 Identities = 151/168 (89%) Strand = Plus / Plus Query: 413 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 472 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 473 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 532 |||||| ||| |||| | |||| | |||||||||||||||| ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcagcgctaattgataaaggaggtgggagtgcatagacaactagga 685 Query: 533 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcact 580 ||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 686 ggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcact 733 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 8 ccgcgtgcctgttgaagaatgagccggcgactcataggca 47 |||||||||||||||||||||||||||||||| ||||||| Sbjct: 187 ccgcgtgcctgttgaagaatgagccggcgacttataggca 226
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 258 bits (130), Expect = 2e-65 Identities = 271/312 (86%), Gaps = 7/312 (2%) Strand = Plus / Plus Query: 80 agccgtagcgaaagcgagtcttaatagggcgatt--gtcactgcttatggacccgaacct 137 |||| |||||||||||||||| ||||||||| | |||||| |||||||||||||||| Sbjct: 656 agccatagcgaaagcgagtctgaatagggcgtcttcgtcacttcttatggacccgaaccc 715 Query: 138 gggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccga 197 |||||||||| |||||||||||||||||||||| | || | ||| |||||||||||||| Sbjct: 716 gggtgatctaaccatgaccaggatgaagcttgggtaaatccaagtggaggtccgaaccga 775 Query: 198 ctgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccag 257 | ||||||||| |||| |||||||||||||||||||||| ||||| ||| |||||| | | Sbjct: 776 ccgatgttgaaaaatcggcggatgagttgtggttaggggagaaattccaatcgaactcgg 835 Query: 258 agctagctggttctccccgaaatgcgttgaggcgcagcagt--tgactggac-atctagg 314 |||||||||| ||||||||||||||||||||||||||| || || || || |||| || Sbjct: 836 agctagctggatctccccgaaatgcgttgaggcgcagcggtaacga-tgaactatcttgg 894 Query: 315 ggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctga 373 |||||||| ||||||||| ||||||||||| || |||||||| ||| ||||||||| || Sbjct: 895 ggtaaagctactgtttcgatgcgggctgcgaaagtggtaccaagtcgtggcaaactcaga 954 Query: 374 atactagatatg 385 |||| ||||||| Sbjct: 955 atacaagatatg 966 Score = 167 bits (84), Expect = 5e-38 Identities = 147/168 (87%) Strand = Plus / Plus Query: 414 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 473 |||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||||||| Sbjct: 978 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagc 1037 Query: 474 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 533 ||||||||||||||| | || |||| |||||| ||| | ||| | ||| ||||||| Sbjct: 1038 taaggcccctaaatggtcactaagtggaaaaggatgtgagaatgctgaaacaaccaggag 1097 Query: 534 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 581 |||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1098 gtttgcttagaagcagccacccttcaaagagtgcgtaatagctcactg 1145 Score = 83.8 bits (42), Expect = 6e-13 Identities = 51/54 (94%) Strand = Plus / Plus Query: 10 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 63 |||||||||||||||||||||||||||||| ||||| ||||||| ||||||||| Sbjct: 591 gcgtgcctgttgaagaatgagccggcgacttataggaagtggctaggttaaggg 644
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 254 bits (128), Expect = 3e-64 Identities = 191/212 (90%) Strand = Plus / Minus Query: 80 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 139 |||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| || Sbjct: 2138156 agccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaacccgg 2138097 Query: 140 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 199 |||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||||| Sbjct: 2138096 gtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgact 2138037 Query: 200 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 259 || |||||| | |||||||||||| |||||||||||||||||||||| |||||||| ||| Sbjct: 2138036 gacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggag 2137977 Query: 260 ctagctggttctccccgaaatgcgttgaggcg 291 ||||||||||||||||||||| |||||||||| Sbjct: 2137976 ctagctggttctccccgaaatacgttgaggcg 2137945 Score = 254 bits (128), Expect = 3e-64 Identities = 191/212 (90%) Strand = Plus / Plus Query: 80 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 139 |||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| || Sbjct: 476704 agccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaacccgg 476763 Query: 140 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 199 |||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||||| Sbjct: 476764 gtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgact 476823 Query: 200 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 259 || |||||| | |||||||||||| |||||||||||||||||||||| |||||||| ||| Sbjct: 476824 gacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggag 476883 Query: 260 ctagctggttctccccgaaatgcgttgaggcg 291 ||||||||||||||||||||| |||||||||| Sbjct: 476884 ctagctggttctccccgaaatacgttgaggcg 476915 Score = 167 bits (84), Expect = 5e-38 Identities = 144/164 (87%) Strand = Plus / Minus Query: 426 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 485 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 2137829 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 2137770 Query: 486 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 545 || | | || |||||||||||||||||| |||| ||||| ||||||||||||||||||| Sbjct: 2137769 atcaacactaagtgataaaggaggtgggattgcatagacaaccaggaggtttgcctagaa 2137710 Query: 546 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 589 ||||||| ||| || |||||||||||||||||||| ||||||| Sbjct: 2137709 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcg 2137666 Score = 167 bits (84), Expect = 5e-38 Identities = 144/164 (87%) Strand = Plus / Plus Query: 426 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 485 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 477031 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 477090 Query: 486 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 545 || | | || |||||||||||||||||| |||| ||||| ||||||||||||||||||| Sbjct: 477091 atcaacactaagtgataaaggaggtgggattgcatagacaaccaggaggtttgcctagaa 477150 Query: 546 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 589 ||||||| ||| || |||||||||||||||||||| ||||||| Sbjct: 477151 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcg 477194 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 327 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 377 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 2137907 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 2137857 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 327 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 377 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 476953 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 477003 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 12 gtgcctgttgaagaatgagccggcgactcataggcagtggc 52 |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2138218 gtgcctgttgaagaatgagccggcgacttataggcactggc 2138178 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 12 gtgcctgttgaagaatgagccggcgactcataggcagtggc 52 |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 476642 gtgcctgttgaagaatgagccggcgacttataggcactggc 476682
>emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segment 6/7 Length = 349122 Score = 254 bits (128), Expect = 3e-64 Identities = 191/212 (90%) Strand = Plus / Minus Query: 80 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 139 |||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| || Sbjct: 339407 agccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaacccgg 339348 Query: 140 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 199 |||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||||| Sbjct: 339347 gtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgact 339288 Query: 200 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 259 || |||||| | |||||||||||| |||||||||||||||||||||| |||||||| ||| Sbjct: 339287 gacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggag 339228 Query: 260 ctagctggttctccccgaaatgcgttgaggcg 291 ||||||||||||||||||||| |||||||||| Sbjct: 339227 ctagctggttctccccgaaatacgttgaggcg 339196 Score = 254 bits (128), Expect = 3e-64 Identities = 191/212 (90%) Strand = Plus / Minus Query: 80 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 139 |||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| || Sbjct: 132467 agccatagcgaaagcgagtctgaatagggcgcttgtcagtgtttatagacccgaacccgg 132408 Query: 140 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 199 |||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||||| Sbjct: 132407 gtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgact 132348 Query: 200 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 259 || |||||| | |||||||||||| |||||||||||||||||||||| |||||||| ||| Sbjct: 132347 gacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggag 132288 Query: 260 ctagctggttctccccgaaatgcgttgaggcg 291 ||||||||||||||||||||| |||||||||| Sbjct: 132287 ctagctggttctccccgaaatacgttgaggcg 132256 Score = 147 bits (74), Expect = 5e-32 Identities = 140/162 (86%) Strand = Plus / Minus Query: 426 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 485 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 339080 tgggggataagctccatggtcaagagggaaacagcccagaccgccagctaaggtccccaa 339021 Query: 486 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 545 || | | || |||||||||||||||||| | || ||||| ||||||||||||||||||| Sbjct: 339020 atcaacactaagtgataaaggaggtgggattccatagacaaccaggaggtttgcctagaa 338961 Query: 546 gcagccaccctttaaagagtgcgtaatagctcactgatcgag 587 ||||||| ||| || |||||||||||||||||||| ||||| Sbjct: 338960 gcagccatcctcaaaggagtgcgtaatagctcactggtcgag 338919 Score = 147 bits (74), Expect = 5e-32 Identities = 140/162 (86%) Strand = Plus / Minus Query: 426 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 485 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 132140 tgggggataagctccatggtcaagagggaaacagcccagaccgccagctaaggtccccaa 132081 Query: 486 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 545 || | | || |||||||||||||||||| | || ||||| ||||||||||||||||||| Sbjct: 132080 atcaacactaagtgataaaggaggtgggattccatagacaaccaggaggtttgcctagaa 132021 Query: 546 gcagccaccctttaaagagtgcgtaatagctcactgatcgag 587 ||||||| ||| || |||||||||||||||||||| ||||| Sbjct: 132020 gcagccatcctcaaaggagtgcgtaatagctcactggtcgag 131979 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 327 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 377 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 339158 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 339108 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Minus Query: 327 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 377 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 132218 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 132168 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 12 gtgcctgttgaagaatgagccggcgactcataggcagtggc 52 |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 339469 gtgcctgttgaagaatgagccggcgacttataggcactggc 339429 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 12 gtgcctgttgaagaatgagccggcgactcataggcagtggc 52 |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 132529 gtgcctgttgaagaatgagccggcgacttataggcactggc 132489
>gb|DQ312972.1| Uncultured bacterium clone 3N4D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 254 bits (128), Expect = 3e-64 Identities = 191/212 (90%) Strand = Plus / Plus Query: 80 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 139 |||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| || Sbjct: 487 agccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaacccgg 546 Query: 140 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 199 |||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||||| Sbjct: 547 gtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgact 606 Query: 200 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 259 || |||||| | |||||||||||| |||||||||||||||||||||| |||||||| ||| Sbjct: 607 gacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggag 666 Query: 260 ctagctggttctccccgaaatgcgttgaggcg 291 ||||||||||||||||||||| |||||||||| Sbjct: 667 ctagctggttctccccgaaatacgttgaggcg 698 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 12 gtgcctgttgaagaatgagccggcgactcataggcagtggc 52 |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 425 gtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312883.1| Uncultured bacterium clone 3K4C 23S ribosomal RNA gene, partial sequence Length = 723 Score = 254 bits (128), Expect = 3e-64 Identities = 191/212 (90%) Strand = Plus / Plus Query: 80 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 139 |||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| || Sbjct: 487 agccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaacccgg 546 Query: 140 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 199 |||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||||| Sbjct: 547 gtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgact 606 Query: 200 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 259 || |||||| | |||||||||||| |||||||||||||||||||||| |||||||| ||| Sbjct: 607 gacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggag 666 Query: 260 ctagctggttctccccgaaatgcgttgaggcg 291 ||||||||||||||||||||| |||||||||| Sbjct: 667 ctagctggttctccccgaaatacgttgaggcg 698 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 12 gtgcctgttgaagaatgagccggcgactcataggcagtggc 52 |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 425 gtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312666.1| Uncultured bacterium clone 3D4G 23S ribosomal RNA gene, partial sequence Length = 806 Score = 254 bits (128), Expect = 3e-64 Identities = 191/212 (90%) Strand = Plus / Plus Query: 80 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 139 |||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| || Sbjct: 487 agccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaacccgg 546 Query: 140 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 199 |||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||||| Sbjct: 547 gtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgact 606 Query: 200 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 259 || |||||| | |||||||||||| |||||||||||||||||||||| |||||||| ||| Sbjct: 607 gacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggag 666 Query: 260 ctagctggttctccccgaaatgcgttgaggcg 291 ||||||||||||||||||||| |||||||||| Sbjct: 667 ctagctggttctccccgaaatacgttgaggcg 698 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 327 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 377 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 12 gtgcctgttgaagaatgagccggcgactcataggcagtggc 52 |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 425 gtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312593.1| Uncultured bacterium clone 3B8B 23S ribosomal RNA gene, partial sequence Length = 723 Score = 254 bits (128), Expect = 3e-64 Identities = 191/212 (90%) Strand = Plus / Plus Query: 80 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 139 |||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| || Sbjct: 487 agccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaacccgg 546 Query: 140 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 199 |||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||||| Sbjct: 547 gtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgact 606 Query: 200 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 259 || |||||| | |||||||||||| |||||||||||||||||||||| |||||||| ||| Sbjct: 607 gacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggag 666 Query: 260 ctagctggttctccccgaaatgcgttgaggcg 291 ||||||||||||||||||||| |||||||||| Sbjct: 667 ctagctggttctccccgaaatacgttgaggcg 698 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 12 gtgcctgttgaagaatgagccggcgactcataggcagtggc 52 |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 425 gtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312550.1| Uncultured bacterium clone 3B11D 23S ribosomal RNA gene, partial sequence Length = 806 Score = 254 bits (128), Expect = 3e-64 Identities = 191/212 (90%) Strand = Plus / Plus Query: 80 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 139 |||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| || Sbjct: 487 agccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaacccgg 546 Query: 140 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 199 |||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||||| Sbjct: 547 gtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgact 606 Query: 200 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 259 || |||||| | |||||||||||| |||||||||||||||||||||| |||||||| ||| Sbjct: 607 gacgttgaaaagtcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggag 666 Query: 260 ctagctggttctccccgaaatgcgttgaggcg 291 ||||||||||||||||||||| |||||||||| Sbjct: 667 ctagctggttctccccgaaatacgttgaggcg 698 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 327 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 377 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 736 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 786 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 12 gtgcctgttgaagaatgagccggcgactcataggcagtggc 52 |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 425 gtgcctgttgaagaatgagccggcgacttataggcactggc 465
>emb|Z18289.1|PPC16SRNA Palmaria palmata Chloroplast for 16SrRNA gene Length = 4870 Score = 252 bits (127), Expect = 1e-63 Identities = 233/267 (87%), Gaps = 1/267 (0%) Strand = Plus / Plus Query: 114 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 173 ||||||| ||| |||||||||| || ||||||| |||| ||||| |||||||| | | Sbjct: 2429 gtcactgtttacagacccgaacccggatgatctagtcatggccagggtgaagcttaggta 2488 Query: 174 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 233 | |||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||| Sbjct: 2489 acactaagtggaggtccgaaccgactgatgttgaaaaatcagcggatgagttgtgattag 2548 Query: 234 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 293 ||||||||||||| ||||| || ||||||||||||||||||||||||||||| |||||| Sbjct: 2549 gggtgaaatgccaatcgaatccggagctagctggttctccccgaaatgcgttttggcgca 2608 Query: 294 gcagttgactggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggta 352 || ||||| | | | ||||||||||||||||||||||| ||||||| | ||||||| Sbjct: 2609 gcggttgatgctatagcttaggggtaaagcactgtttcggtacgggctgtgaaagcggta 2668 Query: 353 ccaaatcgaggcaaactctgaatacta 379 ||||||||||||||||||||||||||| Sbjct: 2669 ccaaatcgaggcaaactctgaatacta 2695 Score = 159 bits (80), Expect = 1e-35 Identities = 146/168 (86%) Strand = Plus / Plus Query: 414 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 473 |||||||||| ||||||||||||||||| ||| | ||||||||||||| || ||||||| Sbjct: 2709 ccagtgagacagtgggggataagcttcattgtcaaaagggaaacagcccagaccaccagc 2768 Query: 474 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 533 |||||||||||||| || |||| |||||| ||||| |||| ||||| ||||||| Sbjct: 2769 taaggcccctaaatatttactaagtggcaaaggaagtgggaatgcatagacaaccaggag 2828 Query: 534 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 581 |||||| |||||||||| |||||||||||||||||||||||||||||| Sbjct: 2829 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactg 2876 Score = 54.0 bits (27), Expect = 5e-04 Identities = 44/50 (88%) Strand = Plus / Plus Query: 3 tctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 52 |||| || ||||| ||||||||||||||||||||||| || |||||||| Sbjct: 2321 tctgacctcgtgcatgttgaagaatgagccggcgacttgtatgcagtggc 2370
>gb|AY584522.1| Lyngbya aestuarii PCC 7419 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 250 bits (126), Expect = 5e-63 Identities = 189/210 (90%) Strand = Plus / Plus Query: 86 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 145 ||||||||||||||| |||||||||| |||| || || | |||||||||| |||||||| Sbjct: 260 agcgaaagcgagtctgaatagggcgaaagtcattgtttgtagacccgaacccgggtgatc 319 Query: 146 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 205 || ||||| |||||||||||||||| | |||| ||| ||||||||||||||| |||||| Sbjct: 320 taaccatgtccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatgtt 379 Query: 206 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 265 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 380 gaaaaatcggcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagct 439 Query: 266 ggttctccccgaaatgcgttgaggcgcagc 295 |||||||||||||||||||||||||||||| Sbjct: 440 ggttctccccgaaatgcgttgaggcgcagc 469 Score = 216 bits (109), Expect = 6e-53 Identities = 160/177 (90%) Strand = Plus / Plus Query: 414 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 473 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 568 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 627 Query: 474 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 533 ||||| ||| |||| ||| || ||||| |||||||||||| ||||| ||||| ||||||| Sbjct: 628 taaggtccccaaataaccactaagtgagaaaggaggtgggagtgcacagacaaccaggag 687 Query: 534 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 590 ||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| Sbjct: 688 gtttgcctagaagcagccatccttgaaagagtgcgtaatagctcactggtcaagcgc 744 Score = 113 bits (57), Expect = 7e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 313 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 372 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 373 aatac 377 ||||| Sbjct: 548 aatac 552 Score = 56.0 bits (28), Expect = 1e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 3 tctgnccgcgtgcctgttgaagaatgagccggcga 37 |||| ||||||||||||||||| |||||||||||| Sbjct: 182 tctgaccgcgtgcctgttgaagcatgagccggcga 216
>gb|AY584518.1| Oscillatoria sp. strain PCC 6506 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 250 bits (126), Expect = 5e-63 Identities = 189/210 (90%) Strand = Plus / Plus Query: 86 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 145 ||||||||||||||| || |||||| | ||||||| |||| |||||||||| |||||||| Sbjct: 260 agcgaaagcgagtctgaaaagggcgttcgtcactgtttatagacccgaacccgggtgatc 319 Query: 146 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 205 || ||||| |||||||||||||||| | | || ||| |||||||||||||||||||||| Sbjct: 320 taaccatgtccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgtt 379 Query: 206 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 265 ||| |||||||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 380 gaaaaatcagcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagct 439 Query: 266 ggttctccccgaaatgcgttgaggcgcagc 295 |||||||||||||||| |||||||| |||| Sbjct: 440 ggttctccccgaaatgtgttgaggcacagc 469 Score = 218 bits (110), Expect = 2e-53 Identities = 161/178 (90%) Strand = Plus / Plus Query: 413 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 472 |||||| ||||| ||||||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 567 gccagtcagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccag 626 Query: 473 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 532 |||||| ||| ||||||| ||| |||||||||||||||| | ||||| |||| |||||| Sbjct: 627 ctaaggtccccaaatgactgctaagtgataaaggaggtgagagtgcactgacaaccagga 686 Query: 533 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 590 ||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| Sbjct: 687 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgc 744 Score = 113 bits (57), Expect = 7e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 313 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 372 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 373 aatac 377 ||||| Sbjct: 548 aatac 552 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 12 gtgcctgttgaagaatgagccggcgactcataggcagtggc 52 ||||||||||||| |||||||||||| | |||||||||||| Sbjct: 191 gtgcctgttgaagcatgagccggcgagttataggcagtggc 231
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 250 bits (126), Expect = 5e-63 Identities = 182/200 (91%), Gaps = 3/200 (1%) Strand = Plus / Plus Query: 184 gaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatg 243 |||| |||||||||| ||||||||| |||| ||||||||||||||||||||||||||||| Sbjct: 736 gaggcccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttaggggtgaaatg 795 Query: 244 ccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact 303 ||| |||||| | ||||||||||||||||||||||||||||||||||||||| || | | Sbjct: 796 ccaatcgaactcggagctagctggttctccccgaaatgcgttgaggcgcagcggtgggtt 855 Query: 304 ---ggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcg 360 || |||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 856 tagggctatctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcg 915 Query: 361 aggcaaactctgaatactag 380 || ||||||||||||||||| Sbjct: 916 agacaaactctgaatactag 935 Score = 170 bits (86), Expect = 3e-39 Identities = 156/178 (87%), Gaps = 1/178 (0%) Strand = Plus / Plus Query: 414 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc-ggatcaccag 472 ||||||||||| || |||||||||||||| ||||| ||||||||||||| ||| |||| | Sbjct: 953 ccagtgagacggtgagggataagcttcattgtcgaaagggaaacagcccaggaccaccgg 1012 Query: 473 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 532 ||||||||||| ||||| || ||||| ||||| ||| | ||||| ||||| |||| | Sbjct: 1013 ctaaggcccctcaatgattcctaagtgacgaaggatgtgagagtgcagagacaaccagaa 1072 Query: 533 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 590 ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct: 1073 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgc 1130 Score = 101 bits (51), Expect = 3e-18 Identities = 54/55 (98%) Strand = Plus / Plus Query: 8 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 62 |||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 564 ccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaagg 618 Score = 63.9 bits (32), Expect = 6e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 113 tgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagctt 168 |||||||| ||||||||||||| | | |||||||| ||||||||||| |||||||| Sbjct: 664 tgtcactgtttatggacccgaatccgagtgatctaaccatgaccagggtgaagctt 719
>gb|AY584525.1| Plectonema terebrans strain CCAP 1463-4 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 248 bits (125), Expect = 2e-62 Identities = 310/369 (84%), Gaps = 6/369 (1%) Strand = Plus / Plus Query: 10 gcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 69 |||||||||||||||||||||||||||||| ||||||| |||| ||||||||| | | Sbjct: 188 gcgtgcctgttgaagaatgagccggcgacttataggcactggca-ggttaaggggaataa 246 Query: 70 acccaccggnagccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggac 129 |||| | |||| || |||| ||||||| ||||||||| | |||| || |||| ||| Sbjct: 247 accc----gaagccaaagggaaaccgagtctgaatagggcgttagtcagtgtttatagac 302 Query: 130 ccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtc 189 ||||||| |||||||||| ||||| |||||||||||||||| ||| || ||| |||||| Sbjct: 303 ccgaacccgggtgatctaaccatgtccaggatgaagcttgggtgacaccaagtggaggtc 362 Query: 190 cgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactc 249 ||||||||| |||||| | ||||||||| |||||||||||||||||||||| || Sbjct: 363 cgaaccgaccaccgttgaaaaggtggcggatgaggtgtggttaggggtgaaatgccaatc 422 Query: 250 gaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggacat 309 |||||| ||||||||||||||||| ||||||| |||||||| |||| |||| ||| Sbjct: 423 gaacccggagctagctggttctcctcgaaatgtgttgaggcacagcggttgtgattacag 482 Query: 310 ct-aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 368 || |||||||||||||| |||||||||||||||| |||||||||||||||||| ||||| Sbjct: 483 ctggggggtaaagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaac 542 Query: 369 tctgaatac 377 || |||||| Sbjct: 543 tcagaatac 551 Score = 200 bits (101), Expect = 4e-48 Identities = 152/169 (89%) Strand = Plus / Plus Query: 413 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 472 |||||| ||||| ||||||||||||||||||||||| ||||||||||||| || |||||| Sbjct: 566 gccagtcagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccag 625 Query: 473 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 532 |||||| ||||||||| ||| |||| ||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtccctaaatggatgctaagtggtaaaggaggtgggattgcagagacaaccagga 685 Query: 533 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 581 |||||||||||||||||||| |||| ||||||||||||||||||||||| Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactg 734
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 246 bits (124), Expect = 7e-62 Identities = 263/304 (86%), Gaps = 4/304 (1%) Strand = Plus / Plus Query: 86 agcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgaacctgggtgat 144 ||||||||| ||||| ||||||||| ||||||||| |||||||||||||||| ||||||| Sbjct: 658 agcgaaagcaagtctgaatagggcgtattgtcacttcttatggacccgaacccgggtgat 717 Query: 145 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 204 |||| |||| |||||||||||||||| | | || ||| ||||||||||||||| ||||| Sbjct: 718 ctattcatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgt 777 Query: 205 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 264 |||| |||| ||||||||| |||| |||||| ||||| ||| |||||| | |||||||| Sbjct: 778 tgaaaaatcggcggatgagctgtgaataggggagaaattccaatcgaactcggagctagc 837 Query: 265 tggttctccccgaaatgcgttgaggcgcagcagt-tgactggac-atctaggggtaaagc 322 ||| ||||||||||||||||||||||||||| || | ||| | |||| |||||||||| Sbjct: 838 tggatctccccgaaatgcgttgaggcgcagcggtaacaatgggctatcttggggtaaagc 897 Query: 323 -actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 381 ||||||||| ||||||||||| ||| |||||||| ||| ||||||||| |||||| ||| Sbjct: 898 gactgtttcgatgcgggctgcgagagtggtaccaagtcgtggcaaactcagaatacaaga 957 Query: 382 tatg 385 |||| Sbjct: 958 tatg 961 Score = 159 bits (80), Expect = 1e-35 Identities = 146/168 (86%) Strand = Plus / Plus Query: 414 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 473 ||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 973 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1032 Query: 474 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 533 ||||||||||||||| | || |||| ||||||| ||| | ||| | ||| |||||| Sbjct: 1033 taaggcccctaaatggtcactaagtggtaaaggatgtgagaatgctgaaacaaccaggaa 1092 Query: 534 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 581 ||| || |||||||||| ||| || ||||||||||||||||||||||| Sbjct: 1093 gttcgcttagaagcagctacctttcaaagagtgcgtaatagctcactg 1140 Score = 75.8 bits (38), Expect = 1e-10 Identities = 44/46 (95%) Strand = Plus / Plus Query: 8 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 53 |||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 584 ccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629
>gb|DQ313038.1| Uncultured bacterium clone 3P8C 23S ribosomal RNA gene, partial sequence Length = 793 Score = 246 bits (124), Expect = 7e-62 Identities = 190/212 (89%) Strand = Plus / Plus Query: 80 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 139 |||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| || Sbjct: 474 agccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaacccgg 533 Query: 140 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 199 |||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| |||| Sbjct: 534 gtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacggact 593 Query: 200 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 259 ||||||||| ||||||| |||||| |||||||||||||||||||||| |||||||| ||| Sbjct: 594 gatgttgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccggag 653 Query: 260 ctagctggttctccccgaaatgcgttgaggcg 291 ||||||||||||||||||||| |||||||||| Sbjct: 654 ctagctggttctccccgaaatacgttgaggcg 685 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 327 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 377 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 723 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 773 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 12 gtgcctgttgaagaatgagccggcgactcatagg 45 |||||||||||||||||||||||||||| ||||| Sbjct: 412 gtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ313003.1| Uncultured bacterium clone 3O5G 23S ribosomal RNA gene, partial sequence Length = 793 Score = 246 bits (124), Expect = 7e-62 Identities = 190/212 (89%) Strand = Plus / Plus Query: 80 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 139 |||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| || Sbjct: 474 agccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaacccgg 533 Query: 140 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 199 |||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| |||| Sbjct: 534 gtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacggact 593 Query: 200 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 259 ||||||||| ||||||| |||||| |||||||||||||||||||||| |||||||| ||| Sbjct: 594 gatgttgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccggag 653 Query: 260 ctagctggttctccccgaaatgcgttgaggcg 291 ||||||||||||||||||||| |||||||||| Sbjct: 654 ctagctggttctccccgaaatacgttgaggcg 685 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 327 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 377 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 723 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 773 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 12 gtgcctgttgaagaatgagccggcgactcatagg 45 |||||||||||||||||||||||||||| ||||| Sbjct: 412 gtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ312801.1| Uncultured bacterium clone 3H5F 23S ribosomal RNA gene, partial sequence Length = 793 Score = 246 bits (124), Expect = 7e-62 Identities = 190/212 (89%) Strand = Plus / Plus Query: 80 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 139 |||| |||||||||||||||| ||||||||| |||||| | |||| |||||||||| || Sbjct: 474 agccatagcgaaagcgagtctgaatagggcgtttgtcagtatttatagacccgaacccgg 533 Query: 140 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 199 |||||||| ||||| |||||||||||||||| ||| || ||| ||||||||||| |||| Sbjct: 534 gtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaacggact 593 Query: 200 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 259 ||||||||| ||||||| |||||| |||||||||||||||||||||| |||||||| ||| Sbjct: 594 gatgttgaaaaatcagccgatgagctgtggttaggggtgaaatgccaatcgaacccggag 653 Query: 260 ctagctggttctccccgaaatgcgttgaggcg 291 ||||||||||||||||||||| |||||||||| Sbjct: 654 ctagctggttctccccgaaatacgttgaggcg 685 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 327 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 377 ||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct: 723 tttcggtgcgggctgcgagagcggtaccaaatcgagatgaactctgaatac 773 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 12 gtgcctgttgaagaatgagccggcgactcatagg 45 |||||||||||||||||||||||||||| ||||| Sbjct: 412 gtgcctgttgaagaatgagccggcgacttatagg 445
>emb|X68927.1|CHCKRRNL1 Chloroplast Chlamydomonas komma rrnL gene, exon 1 Length = 1285 Score = 246 bits (124), Expect = 7e-62 Identities = 263/304 (86%), Gaps = 4/304 (1%) Strand = Plus / Plus Query: 86 agcgaaagcgagtcttaatagggcg-attgtcactgcttatggacccgaacctgggtgat 144 ||||||||| ||||| ||||||||| ||||||||| |||||||||||||||| ||||||| Sbjct: 658 agcgaaagcaagtctgaatagggcgtattgtcacttcttatggacccgaacccgggtgat 717 Query: 145 ctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgt 204 |||| |||| |||||||||||||||| | | || ||| ||||||||||||||| ||||| Sbjct: 718 ctattcatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgt 777 Query: 205 tgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagc 264 |||| |||| ||||||||| |||| |||||| ||||| ||| |||||| | |||||||| Sbjct: 778 tgaaaaatcggcggatgagctgtgaataggggagaaattccaatcgaactcggagctagc 837 Query: 265 tggttctccccgaaatgcgttgaggcgcagcagt-tgactggac-atctaggggtaaagc 322 ||| ||||||||||||||||||||||||||| || | ||| | |||| |||||||||| Sbjct: 838 tggatctccccgaaatgcgttgaggcgcagcggtaacaatgggctatcttggggtaaagc 897 Query: 323 -actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 381 ||||||||| ||||||||||| ||| |||||||| ||| ||||||||| |||||| ||| Sbjct: 898 gactgtttcgatgcgggctgcgagagtggtaccaagtcgtggcaaactcagaatacaaga 957 Query: 382 tatg 385 |||| Sbjct: 958 tatg 961 Score = 159 bits (80), Expect = 1e-35 Identities = 146/168 (86%) Strand = Plus / Plus Query: 414 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 473 ||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 973 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1032 Query: 474 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 533 ||||||||||||||| | || |||| ||||||| ||| | ||| | ||| |||||| Sbjct: 1033 taaggcccctaaatggtcactaagtggtaaaggatgtgagaatgctgaaacaaccaggaa 1092 Query: 534 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 581 ||| || |||||||||| ||| || ||||||||||||||||||||||| Sbjct: 1093 gttcgcttagaagcagctacctttcaaagagtgcgtaatagctcactg 1140 Score = 75.8 bits (38), Expect = 1e-10 Identities = 44/46 (95%) Strand = Plus / Plus Query: 8 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 53 |||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 584 ccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 244 bits (123), Expect = 3e-61 Identities = 192/215 (89%) Strand = Plus / Plus Query: 86 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 145 |||||||||||||| |||||||||||| ||||| || | |||||||||| |||||||| Sbjct: 262 agcgaaagcgagtcctaatagggcgatcgtcacgctttgtagacccgaacccgggtgatc 321 Query: 146 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 205 || ||||| |||||||||||||||| | |||| ||| ||||||||||||||| |||||| Sbjct: 322 taaccatgtccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgaccgatgtt 381 Query: 206 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 265 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 382 gaaaaatcggcggatgaggtgtggttaggggtgaaatgccaatcgaacccggagctagct 441 Query: 266 ggttctccccgaaatgcgttgaggcgcagcagttg 300 |||||||||||||||| ||||||||||||| |||| Sbjct: 442 ggttctccccgaaatgtgttgaggcgcagcggttg 476 Score = 218 bits (110), Expect = 2e-53 Identities = 161/178 (90%) Strand = Plus / Plus Query: 413 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 472 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 569 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 628 Query: 473 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 532 |||||| ||| ||||| ||||||||||| ||||||||||| ||||| ||||| |||||| Sbjct: 629 ctaaggtccccaaatggtcgctcagtgattaaggaggtgggagtgcacagacaaccagga 688 Query: 533 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 590 |||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| Sbjct: 689 ggtttgcctagaagcagcaatccttgaaagagtgcgtaatagctcactggtcaagcgc 746 Score = 97.6 bits (49), Expect = 4e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 313 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 372 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 490 ggggtaaagcactgtttcggtgcgggctgcctcagcggtaccaaatcgagacaaactctg 549 Query: 373 aatac 377 ||||| Sbjct: 550 aatac 554 Score = 56.0 bits (28), Expect = 1e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 3 tctgnccgcgtgcctgttgaagaatgagccggcga 37 |||| ||| |||||||||||||||||||||||||| Sbjct: 182 tctgaccgtgtgcctgttgaagaatgagccggcga 216
>gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3397 Score = 244 bits (123), Expect = 3e-61 Identities = 268/313 (85%), Gaps = 10/313 (3%) Strand = Plus / Plus Query: 80 agccgtagcgaaagcgagtcttaatagggcgatt-----gtcactgcttatggacccgaa 134 |||| ||||||||||||||||||||||||||| | |||||| |||||||||||| Sbjct: 820 agccttagcgaaagcgagtcttaatagggcgaataaagagtcactttctatggacccgaa 879 Query: 135 cctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaac 194 || |||||||||| ||||||||||||||||||||| | | || ||| ||||||||||| Sbjct: 880 cccgggtgatctaatcatgaccaggatgaagcttgggtaacaccaagtggaggtccgaac 939 Query: 195 cgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacc 254 |||| ||||||||| |||| |||||||||||||| ||||||| ||||| ||| |||||| Sbjct: 940 cgaccgatgttgaaaaatcggcggatgagttgtgattaggggagaaattccaatcgaact 999 Query: 255 cagagctagctggttctccccgaaatgcgttgaggcgcagcagttgact---ggacatct 311 | ||||||||||| ||||||||||||||||||||||||||| | ||||| | |||| Sbjct: 1000 cggagctagctggatctccccgaaatgcgttgaggcgcagc-ggtgactatgagctatct 1058 Query: 312 aggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 370 || |||||||| ||||||||| ||||||||||| ||||||||||| ||| ||||||||| Sbjct: 1059 agaggtaaagctactgtttcgatgcgggctgcgaaagcggtaccaagtcgtggcaaactc 1118 Query: 371 tgaatactagata 383 |||||||||||| Sbjct: 1119 agaatactagata 1131 Score = 131 bits (66), Expect = 3e-27 Identities = 117/134 (87%) Strand = Plus / Plus Query: 448 agagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagga 507 ||||||||||||||| ||||||||||||||||||||||||| | || |||| |||||| Sbjct: 1180 agagggaaacagcccagatcaccagctaaggcccctaaatggtcactaagtggaaaagga 1239 Query: 508 ggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgc 567 ||| | ||| | ||| ||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 1240 tgtgagaatgctgaaacaaccaggaggtttgcttagaagcagccacccttgaaagagtgc 1299 Query: 568 gtaatagctcactg 581 |||||||||||||| Sbjct: 1300 gtaatagctcactg 1313 Score = 77.8 bits (39), Expect = 4e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 8 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 62 |||||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 753 ccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcaaggttaagg 807
>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome Length = 1709204 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 86 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 145 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 320233 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 320292 Query: 146 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 205 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 320293 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 320352 Query: 206 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 265 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 320353 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 320412 Query: 266 ggttctccccgaaatgcgttgaggcg 291 ||||||||||||||| |||||||||| Sbjct: 320413 ggttctccccgaaatacgttgaggcg 320438 Score = 159 bits (80), Expect = 1e-35 Identities = 143/164 (87%) Strand = Plus / Plus Query: 426 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 485 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 320554 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 320613 Query: 486 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 545 || | |||| |||||||||||||||||| ||| ||||| ||||||||||||||||||| Sbjct: 320614 attaacgctaagtgataaaggaggtgggattgcccagacaaccaggaggtttgcctagaa 320673 Query: 546 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 589 ||||||| ||| || |||||||||||||||||||| ||||||| Sbjct: 320674 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcg 320717 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 12 gtgcctgttgaagaatgagccggcgactcataggcagtggc 52 |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 320165 gtgcctgttgaagaatgagccggcgacttataggcactggc 320205 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 327 tttcggtgcgggctgcgcgagcggtaccaaatcga 361 ||||||||||||||||| |||||||||||||||| Sbjct: 320476 tttcggtgcgggctgcgaaagcggtaccaaatcga 320510
>gb|AY033310.1| Uncultured Prochlorococcus sp. MB11F02 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3916 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 86 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 145 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 2656 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 2715 Query: 146 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 205 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 2716 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 2775 Query: 206 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 265 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 2776 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 2835 Query: 266 ggttctccccgaaatgcgttgaggcg 291 ||||||||||||||| |||||||||| Sbjct: 2836 ggttctccccgaaatacgttgaggcg 2861 Score = 159 bits (80), Expect = 1e-35 Identities = 143/164 (87%) Strand = Plus / Plus Query: 426 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 485 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 2977 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 3036 Query: 486 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 545 || | |||| |||||||||||||||||| ||| ||||| ||||||||||||||||||| Sbjct: 3037 attaacgctaagtgataaaggaggtgggattgcccagacaaccaggaggtttgcctagaa 3096 Query: 546 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 589 ||||||| ||| || |||||||||||||||||||| ||||||| Sbjct: 3097 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcg 3140 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 12 gtgcctgttgaagaatgagccggcgactcataggcagtggc 52 |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2588 gtgcctgttgaagaatgagccggcgacttataggcactggc 2628 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 327 tttcggtgcgggctgcgcgagcggtaccaaatcga 361 ||||||||||||||||| |||||||||||||||| Sbjct: 2899 tttcggtgcgggctgcgaaagcggtaccaaatcga 2933
>gb|AY033307.1| Uncultured Prochlorococcus sp. MB11E08 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3917 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 86 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 145 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 2657 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 2716 Query: 146 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 205 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 2717 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 2776 Query: 206 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 265 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 2777 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 2836 Query: 266 ggttctccccgaaatgcgttgaggcg 291 ||||||||||||||| |||||||||| Sbjct: 2837 ggttctccccgaaatacgttgaggcg 2862 Score = 159 bits (80), Expect = 1e-35 Identities = 143/164 (87%) Strand = Plus / Plus Query: 426 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 485 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 2978 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 3037 Query: 486 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 545 || | |||| |||||||||||||||||| ||| ||||| ||||||||||||||||||| Sbjct: 3038 attaacgctaagtgataaaggaggtgggattgcccagacaaccaggaggtttgcctagaa 3097 Query: 546 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 589 ||||||| ||| || |||||||||||||||||||| ||||||| Sbjct: 3098 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcg 3141 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 12 gtgcctgttgaagaatgagccggcgactcataggcagtggc 52 |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2589 gtgcctgttgaagaatgagccggcgacttataggcactggc 2629 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 327 tttcggtgcgggctgcgcgagcggtaccaaatcga 361 ||||||||||||||||| |||||||||||||||| Sbjct: 2900 tttcggtgcgggctgcgaaagcggtaccaaatcga 2934
>gb|AY584523.1| Microcystis sp. strain PCC 7820 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 242 bits (122), Expect = 1e-60 Identities = 253/295 (85%), Gaps = 5/295 (1%) Strand = Plus / Plus Query: 86 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 145 ||||||||||||||| |||||||||| |||| || | |||||||||| |||||||| Sbjct: 259 agcgaaagcgagtctgaatagggcgaacgtcataatttgtagacccgaacccgggtgatc 318 Query: 146 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 205 || ||||| |||||||||||||||| | |||| ||| |||||||||||||||| ||||| Sbjct: 319 taaccatggccaggatgaagcttgggtaaaaccaagtggaggtccgaaccgactaatgtt 378 Query: 206 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 265 ||| ||| |||||||||| |||||||||||||||||||||| |||||| | ||||||||| Sbjct: 379 gaaaaattagcggatgagctgtggttaggggtgaaatgccaatcgaactcggagctagct 438 Query: 266 ggttctccccgaaatgcgttgaggcgcagcagttgactggacatcta---ggggtaaagc 322 |||||||||||||||| ||||||||||||| || | |||| | || |||||||||| Sbjct: 439 ggttctccccgaaatgtgttgaggcgcagcggt--agtggaagtttagtcggggtaaagc 496 Query: 323 actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 377 ||||||||| |||||||| | || ||||||||| ||||||||||||||||||| Sbjct: 497 actgtttcgccgcgggctgggagaccggtaccaaggcgaggcaaactctgaatac 551 Score = 208 bits (105), Expect = 2e-50 Identities = 159/177 (89%) Strand = Plus / Plus Query: 414 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 473 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 566 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 625 Query: 474 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 533 ||||| ||| |||||| || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 626 taaggtccccaaatgataactaagtgagaaaggaggtgggagtgcattgacaaccaggag 685 Query: 534 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 590 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| Sbjct: 686 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgc 742 Score = 60.0 bits (30), Expect = 9e-06 Identities = 35/37 (94%) Strand = Plus / Plus Query: 3 tctgnccgcgtgcctgttgaagaatgagccggcgact 39 |||| ||| |||||||||||||||||||||||||||| Sbjct: 182 tctgaccgtgtgcctgttgaagaatgagccggcgact 218
>gb|AY584513.1| Nodularia harveyana strain CCAP 1452/1 23S ribosomal RNA gene, partial sequence Length = 2387 Score = 242 bits (122), Expect = 1e-60 Identities = 252/292 (86%), Gaps = 5/292 (1%) Strand = Plus / Plus Query: 89 gaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatctat 148 |||| ||||||| || ||||||| ||| || |||| |||||||||| ||||||||| Sbjct: 262 gaaaccgagtctgaaaagggcgaaaatcagtgtttatagacccgaaccctggtgatctaa 321 Query: 149 ccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgttgaa 208 ||||| |||||||||||||||| | | || ||| ||||||||||||||||||||||||| Sbjct: 322 ccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgactgatgttgaa 381 Query: 209 gaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagctggt 268 |||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 382 aaatcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagctggt 441 Query: 269 tctccccgaaatgcgttgaggcgcagcagt--tgactggacatctag-gggtaaagcact 325 ||||||||||||| ||| ||||||||| || ||| | | |||| | |||||||||||| Sbjct: 442 tctccccgaaatgtgtttaggcgcagcggtaatgatt--aaatctggggggtaaagcact 499 Query: 326 gtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 377 |||||||||||||||| | || ||||||||||||||| ||||||| |||||| Sbjct: 500 gtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcagaatac 551 Score = 198 bits (100), Expect = 1e-47 Identities = 151/168 (89%) Strand = Plus / Plus Query: 413 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 472 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 473 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 532 |||||| ||| |||| | ||| |||||||||||||||||| ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcattgctaagtgataaaggaggtgggagtgcagagacaactagga 685 Query: 533 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcact 580 ||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 686 ggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcact 733 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 8 ccgcgtgcctgttgaagaatgagccggcgactcataggca 47 |||||||||||||||||||||||||||||||| ||||||| Sbjct: 187 ccgcgtgcctgttgaagaatgagccggcgacttataggca 226
>gb|DQ366719.1| Uncultured Prochlorococcus marinus clone ASNC729 genomic sequence Length = 38521 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Minus Query: 86 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 145 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 20224 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 20165 Query: 146 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 205 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 20164 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 20105 Query: 206 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 265 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 20104 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 20045 Query: 266 ggttctccccgaaatgcgttgaggcg 291 ||||||||||||||| |||||||||| Sbjct: 20044 ggttctccccgaaatacgttgaggcg 20019 Score = 159 bits (80), Expect = 1e-35 Identities = 143/164 (87%) Strand = Plus / Minus Query: 426 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 485 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 19903 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 19844 Query: 486 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 545 || | |||| |||||||||||||||||| ||| ||||| ||||||||||||||||||| Sbjct: 19843 attaacgctaagtgataaaggaggtgggattgcccagacaaccaggaggtttgcctagaa 19784 Query: 546 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 589 ||||||| ||| || |||||||||||||||||||| ||||||| Sbjct: 19783 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcg 19740 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 12 gtgcctgttgaagaatgagccggcgactcataggcagtggc 52 |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 20292 gtgcctgttgaagaatgagccggcgacttataggcactggc 20252 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 327 tttcggtgcgggctgcgcgagcggtaccaaatcga 361 ||||||||||||||||| |||||||||||||||| Sbjct: 19981 tttcggtgcgggctgcgaaagcggtaccaaatcga 19947
>gb|DQ366714.1| Uncultured Prochlorococcus marinus clone ASNC2150 genomic sequence Length = 37884 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Minus Query: 86 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 145 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 1978 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 1919 Query: 146 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 205 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 1918 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 1859 Query: 206 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 265 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 1858 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 1799 Query: 266 ggttctccccgaaatgcgttgaggcg 291 ||||||||||||||| |||||||||| Sbjct: 1798 ggttctccccgaaatacgttgaggcg 1773 Score = 159 bits (80), Expect = 1e-35 Identities = 143/164 (87%) Strand = Plus / Minus Query: 426 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 485 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 1657 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 1598 Query: 486 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 545 || | |||| |||||||||||||||||| ||| ||||| ||||||||||||||||||| Sbjct: 1597 attaacgctaagtgataaaggaggtgggattgcccagacaaccaggaggtttgcctagaa 1538 Query: 546 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 589 ||||||| ||| || |||||||||||||||||||| ||||||| Sbjct: 1537 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcg 1494 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 12 gtgcctgttgaagaatgagccggcgactcataggcagtggc 52 |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2046 gtgcctgttgaagaatgagccggcgacttataggcactggc 2006 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 327 tttcggtgcgggctgcgcgagcggtaccaaatcga 361 ||||||||||||||||| |||||||||||||||| Sbjct: 1735 tttcggtgcgggctgcgaaagcggtaccaaatcga 1701
>emb|BX572090.1| Prochlorococcus marinus MED4 complete genome; segment 1/5 Length = 349742 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 86 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 145 ||||||||||||||||||||||||| |||||| || |||| |||||||||| ||||||| Sbjct: 315722 agcgaaagcgagtcttaatagggcgtttgtcagtgtttatagacccgaaccctggtgatc 315781 Query: 146 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 205 || ||||| |||||||||||||||| ||| || ||| |||||||||||||||||| ||| Sbjct: 315782 taaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgactgaagtt 315841 Query: 206 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 265 ||| | |||||||||||| |||||||||||||||||||||| ||||||| ||||||||| Sbjct: 315842 gaaaattcagcggatgagctgtggttaggggtgaaatgccaatcgaaccaggagctagct 315901 Query: 266 ggttctccccgaaatgcgttgaggcg 291 ||||||||||||||| |||||||||| Sbjct: 315902 ggttctccccgaaatacgttgaggcg 315927 Score = 159 bits (80), Expect = 1e-35 Identities = 143/164 (87%) Strand = Plus / Plus Query: 426 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 485 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 316043 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 316102 Query: 486 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 545 || | |||| |||||||||||||||||| ||| ||||| ||||||||||||||||||| Sbjct: 316103 attaacgctaagtgataaaggaggtgggattgcccagacaaccaggaggtttgcctagaa 316162 Query: 546 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 589 ||||||| ||| || |||||||||||||||||||| ||||||| Sbjct: 316163 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcg 316206 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 12 gtgcctgttgaagaatgagccggcgactcataggcagtggc 52 |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 315654 gtgcctgttgaagaatgagccggcgacttataggcactggc 315694 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 327 tttcggtgcgggctgcgcgagcggtaccaaatcga 361 ||||||||||||||||| |||||||||||||||| Sbjct: 315965 tttcggtgcgggctgcgaaagcggtaccaaatcga 315999
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 242 bits (122), Expect = 1e-60 Identities = 265/307 (86%), Gaps = 8/307 (2%) Strand = Plus / Plus Query: 86 agcgaaagcgagtcttaatagggcg---attgtcactgcttatggacccgaacctgggtg 142 ||||||||||||||| ||||||||| || |||||| |||||||||||||||| ||||| Sbjct: 654 agcgaaagcgagtctgaatagggcgcaaatggtcacttcttatggacccgaacccgggtg 713 Query: 143 atctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgat 202 |||||| ||||||||||||||||||||| | | || ||| ||||||||||||||| ||| Sbjct: 714 atctattcatgaccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgat 773 Query: 203 gttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagcta 262 |||||| |||| |||||||||||||| |||||| ||||| ||| |||||| | |||||| Sbjct: 774 gttgaaaaatcggcggatgagttgtgaataggggagaaattccaatcgaactcggagcta 833 Query: 263 gctggttctccccgaaatgcgttgaggcgcagcagt--tgactggac-atctaggggtaa 319 ||||| ||||||||||||||||||||||||||| || || || || |||| ||||||| Sbjct: 834 gctggatctccccgaaatgcgttgaggcgcagcggtaacga-tgaactatcttggggtaa 892 Query: 320 agc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 378 ||| ||||||||| ||||||||||| || |||||||| ||| ||||||||| |||||| Sbjct: 893 agctactgtttcgatgcgggctgcgaaagtggtaccaagtcgtggcaaactcagaataca 952 Query: 379 agatatg 385 ||||||| Sbjct: 953 agatatg 959 Score = 151 bits (76), Expect = 3e-33 Identities = 130/148 (87%) Strand = Plus / Plus Query: 434 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 493 ||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||| | | Sbjct: 2707 aagcttcattgtcaagagggaaacagcccagatcaccagctaaggcccctaaatggtcac 2766 Query: 494 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 553 | |||| ||||||| ||| | ||| | ||| ||||||||||||| ||||||||||||| Sbjct: 2767 taagtggtaaaggatgtgagaatgctgaaacaaccaggaggtttgcttagaagcagccac 2826 Query: 554 cctttaaagagtgcgtaatagctcactg 581 |||| ||||||||||||||||||||||| Sbjct: 2827 ccttcaaagagtgcgtaatagctcactg 2854 Score = 77.8 bits (39), Expect = 4e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 8 ccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 62 |||||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 581 ccgcgtgcctgttgaagaatgagccggcgacttataggaagtggccgggttaagg 635
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 86 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 145 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 1659136 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 1659195 Query: 146 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 205 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 1659196 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 1659255 Query: 206 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 265 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1659256 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 1659315 Query: 266 ggttctccccgaaatgcgttgaggcg 291 ||||||||||||||| |||||||||| Sbjct: 1659316 ggttctccccgaaatacgttgaggcg 1659341 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Minus Query: 86 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 145 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 1049608 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 1049549 Query: 146 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 205 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 1049548 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 1049489 Query: 206 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 265 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1049488 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 1049429 Query: 266 ggttctccccgaaatgcgttgaggcg 291 ||||||||||||||| |||||||||| Sbjct: 1049428 ggttctccccgaaatacgttgaggcg 1049403 Score = 170 bits (86), Expect = 3e-39 Identities = 155/178 (87%) Strand = Plus / Plus Query: 413 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 472 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 1659443 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 1659502 Query: 473 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 532 |||||| || |||| | || |||||||||||||||||| ||||| ||||| |||||| Sbjct: 1659503 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagacaaccagga 1659562 Query: 533 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 590 |||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| Sbjct: 1659563 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgc 1659620 Score = 170 bits (86), Expect = 3e-39 Identities = 155/178 (87%) Strand = Plus / Minus Query: 413 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 472 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 1049301 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 1049242 Query: 473 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 532 |||||| || |||| | || |||||||||||||||||| ||||| ||||| |||||| Sbjct: 1049241 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagacaaccagga 1049182 Query: 533 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 590 |||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| Sbjct: 1049181 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgc 1049124 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Plus Query: 313 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 372 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1659364 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 1659423 Query: 373 aatac 377 ||||| Sbjct: 1659424 aatac 1659428 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Minus Query: 313 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 372 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1049380 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 1049321 Query: 373 aatac 377 ||||| Sbjct: 1049320 aatac 1049316 Score = 69.9 bits (35), Expect = 9e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 10 gcgtgcctgttgaagaatgagccggcgactcataggcagtggc 52 |||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 1659066 gcgtgcctgttgaagaatgagccggcgacttataggcactggc 1659108 Score = 69.9 bits (35), Expect = 9e-09 Identities = 41/43 (95%) Strand = Plus / Minus Query: 10 gcgtgcctgttgaagaatgagccggcgactcataggcagtggc 52 |||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 1049678 gcgtgcctgttgaagaatgagccggcgacttataggcactggc 1049636
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 242 bits (122), Expect = 1e-60 Identities = 188/210 (89%) Strand = Plus / Plus Query: 86 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 145 ||||||||| ||||| ||||||||| |||| ||||||||||||||||||| |||||||| Sbjct: 633 agcgaaagcaagtctgaatagggcgtatgtccctgcttatggacccgaacccgggtgatc 692 Query: 146 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 205 || |||||||||||||||||||| | ||| ||| ||||||||||||||| |||||| Sbjct: 693 taaccatgaccaggatgaagcttcagtaaaatgaagtggaggtccgaaccgaccgatgtt 752 Query: 206 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 265 ||| |||| || ||||||||||||||||||||||||||||| |||||| | ||||||||| Sbjct: 753 gaaaaatcggctgatgagttgtggttaggggtgaaatgccaatcgaactcggagctagct 812 Query: 266 ggttctccccgaaatgcgttgaggcgcagc 295 |||||||||||||||||||||||||||||| Sbjct: 813 ggttctccccgaaatgcgttgaggcgcagc 842 Score = 234 bits (118), Expect = 3e-58 Identities = 163/178 (91%) Strand = Plus / Plus Query: 413 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 472 |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccat 1003 Query: 473 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 532 |||||||||| ||||||||||| |||| ||||||||| | ||||||||||| |||||| Sbjct: 1004 ctaaggccccaaaatgaccgctaagtggcaaaggaggtaagagtgcaaagacaaccagga 1063 Query: 533 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 590 ||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| Sbjct: 1064 ggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgc 1121 Score = 105 bits (53), Expect = 2e-19 Identities = 58/60 (96%) Strand = Plus / Plus Query: 3 tctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 62 |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 556 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaagg 615 Score = 103 bits (52), Expect = 7e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 308 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 367 |||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||| Sbjct: 859 atctaggggtaaagcactgtatcggtgcgggctgcgaaagcggtaccaaatcgtaacaaa 918 Query: 368 ctctgaatactagata 383 |||||||||||||||| Sbjct: 919 ctctgaatactagata 934
>emb|X00512.1|ANRN03 Anacystis nidulans 23S rRNA gene and flanking regions Length = 3282 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 86 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 145 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 898 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 957 Query: 146 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 205 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 958 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 1017 Query: 206 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 265 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 1018 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 1077 Query: 266 ggttctccccgaaatgcgttgaggcg 291 ||||||||||||||| |||||||||| Sbjct: 1078 ggttctccccgaaatacgttgaggcg 1103 Score = 170 bits (86), Expect = 3e-39 Identities = 155/178 (87%) Strand = Plus / Plus Query: 413 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 472 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 1205 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 1264 Query: 473 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 532 |||||| || |||| | || |||||||||||||||||| ||||| ||||| |||||| Sbjct: 1265 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagacaaccagga 1324 Query: 533 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 590 |||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| Sbjct: 1325 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgc 1382 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Plus Query: 313 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 372 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1126 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 1185 Query: 373 aatac 377 ||||| Sbjct: 1186 aatac 1190 Score = 69.9 bits (35), Expect = 9e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 10 gcgtgcctgttgaagaatgagccggcgactcataggcagtggc 52 |||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 828 gcgtgcctgttgaagaatgagccggcgacttataggcactggc 870
>emb|AM084273.1| Paulinella chromatophora plastid 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain M 0880 Length = 4934 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 86 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 145 ||||||||||||||| ||||||||||| |||| | |||| |||||||||| |||||||| Sbjct: 2851 agcgaaagcgagtctgaatagggcgatggtcagtatttatagacccgaacccgggtgatc 2910 Query: 146 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 205 || ||||| |||||||||||||||| ||| || | | |||||||||||||||||||||| Sbjct: 2911 taaccatggccaggatgaagcttgggtgataccacgtggaggtccgaaccgactgatgtt 2970 Query: 206 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 265 ||| |||||||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 2971 gaaaaatcagcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 3030 Query: 266 ggttctccccgaaatgcgttgaggcg 291 ||||||||||||||| |||| ||||| Sbjct: 3031 ggttctccccgaaatacgtttaggcg 3056 Score = 167 bits (84), Expect = 5e-38 Identities = 144/164 (87%) Strand = Plus / Plus Query: 426 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 485 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| |||||| Sbjct: 3172 tgggggataagctccatggtcaagagggaaacagcccagaccgccagctaaggtccctaa 3231 Query: 486 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 545 || | |||| |||||||||||||||||| ||| ||||| ||||||||||||||||||| Sbjct: 3232 ataagcgctaagtgataaaggaggtgggattgcccagacaaccaggaggtttgcctagaa 3291 Query: 546 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 589 ||||||| ||| || |||||||||||||||||||| ||||||| Sbjct: 3292 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcg 3335 Score = 91.7 bits (46), Expect = 3e-15 Identities = 62/66 (93%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 313 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 371 |||||||||| ||||||||||| ||||||||| |||||||||||||||||| |||||||| Sbjct: 3079 ggggtaaagccactgtttcggtacgggctgcgagagcggtaccaaatcgagacaaactct 3138 Query: 372 gaatac 377 |||||| Sbjct: 3139 gaatac 3144 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 12 gtgcctgttgaagaatgagccggcgactcatagg 45 |||||||||||||||||||||||||||| ||||| Sbjct: 2783 gtgcctgttgaagaatgagccggcgacttatagg 2816
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Minus Query: 86 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 145 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 2657650 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 2657591 Query: 146 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 205 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 2657590 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 2657531 Query: 206 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 265 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 2657530 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 2657471 Query: 266 ggttctccccgaaatgcgttgaggcg 291 ||||||||||||||| |||||||||| Sbjct: 2657470 ggttctccccgaaatacgttgaggcg 2657445 Score = 242 bits (122), Expect = 1e-60 Identities = 185/206 (89%) Strand = Plus / Plus Query: 86 agcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgggtgatc 145 ||||||||||||||| ||||||||||| |||| || |||| |||||||||| |||||||| Sbjct: 571271 agcgaaagcgagtctgaatagggcgatagtcagtgtttatagacccgaacccgggtgatc 571330 Query: 146 tatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgactgatgtt 205 || ||||| |||||||||||||||| | | || ||| ||||||||||||||| |||||| Sbjct: 571331 taaccatggccaggatgaagcttgggtaacaccaagtggaggtccgaaccgaccgatgtt 571390 Query: 206 gaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagagctagct 265 ||| |||| ||||||||| |||||||||||||||||||||| |||||||| ||||||||| Sbjct: 571391 gaaaaatcggcggatgagctgtggttaggggtgaaatgccaatcgaacccggagctagct 571450 Query: 266 ggttctccccgaaatgcgttgaggcg 291 ||||||||||||||| |||||||||| Sbjct: 571451 ggttctccccgaaatacgttgaggcg 571476 Score = 170 bits (86), Expect = 3e-39 Identities = 155/178 (87%) Strand = Plus / Minus Query: 413 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 472 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 2657343 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 2657284 Query: 473 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 532 |||||| || |||| | || |||||||||||||||||| ||||| ||||| |||||| Sbjct: 2657283 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagacaaccagga 2657224 Query: 533 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 590 |||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| Sbjct: 2657223 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgc 2657166 Score = 170 bits (86), Expect = 3e-39 Identities = 155/178 (87%) Strand = Plus / Plus Query: 413 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 472 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 571578 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 571637 Query: 473 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 532 |||||| || |||| | || |||||||||||||||||| ||||| ||||| |||||| Sbjct: 571638 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagacaaccagga 571697 Query: 533 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 590 |||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| Sbjct: 571698 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgc 571755 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Minus Query: 313 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 372 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 2657422 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 2657363 Query: 373 aatac 377 ||||| Sbjct: 2657362 aatac 2657358 Score = 89.7 bits (45), Expect = 1e-14 Identities = 60/65 (92%) Strand = Plus / Plus Query: 313 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 372 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 571499 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 571558 Query: 373 aatac 377 ||||| Sbjct: 571559 aatac 571563 Score = 69.9 bits (35), Expect = 9e-09 Identities = 41/43 (95%) Strand = Plus / Minus Query: 10 gcgtgcctgttgaagaatgagccggcgactcataggcagtggc 52 |||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2657720 gcgtgcctgttgaagaatgagccggcgacttataggcactggc 2657678 Score = 69.9 bits (35), Expect = 9e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 10 gcgtgcctgttgaagaatgagccggcgactcataggcagtggc 52 |||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 571201 gcgtgcctgttgaagaatgagccggcgacttataggcactggc 571243
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 240 bits (121), Expect = 4e-60 Identities = 236/272 (86%), Gaps = 3/272 (1%) Strand = Plus / Plus Query: 114 gtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttggatg 173 |||||| |||||||||||||||| |||||||||| |||| |||||||||| |||| | Sbjct: 856 gtcacttcttatggacccgaacccgggtgatctaatcatggccaggatgaaatttgggta 915 Query: 174 aaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggttag 233 | || || | ||||||||||||||| ||||||||| |||| |||||||||||||| |||| Sbjct: 916 acaccaaccggaggtccgaaccgaccgatgttgaaaaatcggcggatgagttgtgattag 975 Query: 234 gggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcgca 293 ||| ||||| ||| |||||| | ||||||||||| ||||||||||||||||||||||||| Sbjct: 976 gggagaaattccaatcgaactcggagctagctggatctccccgaaatgcgttgaggcgca 1035 Query: 294 gcagtt--gactggacatctaggggtaaagc-actgtttcggtgcgggctgcgcgagcgg 350 || ||| || | |||||||||||||||| ||||||||||||||||||||| ||||| Sbjct: 1036 gcggttaagatttaccatctaggggtaaagcgactgtttcggtgcgggctgcgaaagcgg 1095 Query: 351 taccaaatcgaggcaaactctgaatactagat 382 |||||| ||| ||||||||| ||||||||||| Sbjct: 1096 taccaagtcgtggcaaactcagaatactagat 1127 Score = 123 bits (62), Expect = 7e-25 Identities = 116/134 (86%) Strand = Plus / Plus Query: 448 agagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagga 507 ||||||||||||||| ||||||||||||||||||||||||| | || |||| |||||| Sbjct: 1177 agagggaaacagcccagatcaccagctaaggcccctaaatggtcactaagtggaaaagga 1236 Query: 508 ggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgc 567 ||| | ||| | ||| ||||||||||||| ||||||||||||||||| | ||||||| Sbjct: 1237 tgtgagaatgctgaaacaaccaggaggtttgcttagaagcagccacccttgatagagtgc 1296 Query: 568 gtaatagctcactg 581 |||||||||||||| Sbjct: 1297 gtaatagctcactg 1310 Score = 75.8 bits (38), Expect = 1e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 4 ctgnccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 52 ||| |||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 745 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc 793
>gb|AF041468.1| Guillardia theta complete plastid genome Length = 121524 Score = 240 bits (121), Expect = 4e-60 Identities = 233/269 (86%), Gaps = 1/269 (0%) Strand = Plus / Minus Query: 112 ttgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgga 171 ||||||||| ||| |||||||||| || ||||||| ||||| |||| |||||||| | Sbjct: 39762 ttgtcactgtttacagacccgaacccggatgatctaaccatggccagcgtgaagcttagg 39703 Query: 172 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 231 | | |||||| ||||| ||||||||||||||||||| |||||||||||||| ||||||| Sbjct: 39702 taacactaagtggaggtgcgaaccgactgatgttgaaaaatcagcggatgagctgtggtt 39643 Query: 232 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 291 ||||||||||||||| ||||| || ||||||||||||||||||||||||||||| ||||| Sbjct: 39642 aggggtgaaatgccaatcgaatccggagctagctggttctccccgaaatgcgtttaggcg 39583 Query: 292 cagcagttgactggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcgg 350 |||| |||| || | |||||||||||||||||||||||||||||||| |||| Sbjct: 39582 cagcgattgatgctccaacttaggggtaaagcactgtttcggtgcgggctgctaacgcgg 39523 Query: 351 taccaaatcgaggcaaactctgaatacta 379 ||||||||||| ||||||||||||||||| Sbjct: 39522 taccaaatcgatgcaaactctgaatacta 39494 Score = 240 bits (121), Expect = 4e-60 Identities = 233/269 (86%), Gaps = 1/269 (0%) Strand = Plus / Plus Query: 112 ttgtcactgcttatggacccgaacctgggtgatctatccatgaccaggatgaagcttgga 171 ||||||||| ||| |||||||||| || ||||||| ||||| |||| |||||||| | Sbjct: 19638 ttgtcactgtttacagacccgaacccggatgatctaaccatggccagcgtgaagcttagg 19697 Query: 172 tgaaactaagcagaggtccgaaccgactgatgttgaagaatcagcggatgagttgtggtt 231 | | |||||| ||||| ||||||||||||||||||| |||||||||||||| ||||||| Sbjct: 19698 taacactaagtggaggtgcgaaccgactgatgttgaaaaatcagcggatgagctgtggtt 19757 Query: 232 aggggtgaaatgccactcgaacccagagctagctggttctccccgaaatgcgttgaggcg 291 ||||||||||||||| ||||| || ||||||||||||||||||||||||||||| ||||| Sbjct: 19758 aggggtgaaatgccaatcgaatccggagctagctggttctccccgaaatgcgtttaggcg 19817 Query: 292 cagcagttgactggacatc-taggggtaaagcactgtttcggtgcgggctgcgcgagcgg 350 |||| |||| || | |||||||||||||||||||||||||||||||| |||| Sbjct: 19818 cagcgattgatgctccaacttaggggtaaagcactgtttcggtgcgggctgctaacgcgg 19877 Query: 351 taccaaatcgaggcaaactctgaatacta 379 ||||||||||| ||||||||||||||||| Sbjct: 19878 taccaaatcgatgcaaactctgaatacta 19906 Score = 153 bits (77), Expect = 8e-34 Identities = 143/165 (86%) Strand = Plus / Minus Query: 426 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 485 ||||||||||||| ||| ||| | ||||||||||||| || |||||| |||||||||||| Sbjct: 39468 tgggggataagctccattgtcaaaagggaaacagcccagaccaccagttaaggcccctaa 39409 Query: 486 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 545 || | ||| |||||||||||| ||||| ||| ||||| ||||||||| |||||||| Sbjct: 39408 ataattgctaagtgataaaggatgtgggaatgctgagacaatcaggaggttcgcctagaa 39349 Query: 546 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 590 ||||| | ||||||||||||||||||||||||||||||| ||||| Sbjct: 39348 gcagctatcctttaaagagtgcgtaatagctcactgatcaagcgc 39304 Score = 153 bits (77), Expect = 8e-34 Identities = 143/165 (86%) Strand = Plus / Plus Query: 426 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 485 ||||||||||||| ||| ||| | ||||||||||||| || |||||| |||||||||||| Sbjct: 19932 tgggggataagctccattgtcaaaagggaaacagcccagaccaccagttaaggcccctaa 19991 Query: 486 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 545 || | ||| |||||||||||| ||||| ||| ||||| ||||||||| |||||||| Sbjct: 19992 ataattgctaagtgataaaggatgtgggaatgctgagacaatcaggaggttcgcctagaa 20051 Query: 546 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgc 590 ||||| | ||||||||||||||||||||||||||||||| ||||| Sbjct: 20052 gcagctatcctttaaagagtgcgtaatagctcactgatcaagcgc 20096 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 15 cctgttgaagaatgagccggcgactcataggcagtggc 52 ||||||||||||||||||||||||| |||| |||||| Sbjct: 39855 cctgttgaagaatgagccggcgacttgtaggtagtggc 39818 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 15 cctgttgaagaatgagccggcgactcataggcagtggc 52 ||||||||||||||||||||||||| |||| |||||| Sbjct: 19545 cctgttgaagaatgagccggcgacttgtaggtagtggc 19582
>emb|AM084274.1| Glaucocystis nostochinearum cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 45.88 Length = 3065 Score = 240 bits (121), Expect = 4e-60 Identities = 221/253 (87%), Gaps = 1/253 (0%) Strand = Plus / Plus Query: 128 acccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagagg 187 ||||||||| |||||||||| ||||| ||||| |||||||||| | |||||||| |||| Sbjct: 1132 acccgaacccgggtgatctaaccatggccagggtgaagcttgggtaaaactaagtggagg 1191 Query: 188 tccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccac 247 |||||| || ||||||||| |||| |||||||||||||||||| |||||||||||| Sbjct: 1192 cccgaactgatcgatgttgaaaaatcgtcggatgagttgtggttagcggtgaaatgccaa 1251 Query: 248 tcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactggac 307 |||||||| ||||||||||||||||||||||||| ||||||||||||| ||| | | Sbjct: 1252 tcgaacccggagctagctggttctccccgaaatgtgttgaggcgcagcggttaagattat 1311 Query: 308 atc-taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaa 366 | | ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 1312 aacttaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgatgcaa 1371 Query: 367 actctgaatacta 379 ||| |||||||| Sbjct: 1372 actaagaatacta 1384 Score = 176 bits (89), Expect = 5e-41 Identities = 152/173 (87%) Strand = Plus / Plus Query: 426 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 485 ||||||||||||| ||| ||| ||||||||||||||| || |||||| ||||||||| || Sbjct: 1410 tgggggataagctccattgtcaagagggaaacagcccagaccaccagttaaggccccaaa 1469 Query: 486 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 545 || | ||| |||| ||||||||||||| |||| ||||| ||||||||||||||||||| Sbjct: 1470 ataatagctaagtggtaaaggaggtgggagtgcttagacaaccaggaggtttgcctagaa 1529 Query: 546 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgc 598 ||||| | |||||||||||||||||||||||||||| || ||||| ||||||| Sbjct: 1530 gcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgctcttgcgc 1582 Score = 69.9 bits (35), Expect = 9e-09 Identities = 41/43 (95%) Strand = Plus / Plus Query: 10 gcgtgcctgttgaagaatgagccggcgactcataggcagtggc 52 |||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 1017 gcgtgcctgttgaagaatgagccggcgacttataggtagtggc 1059
>emb|X76084.1|CHNERRNA N.eucaryotum chloroplast 16S rRNA, tRNA-Ile, tRNA-Ala and 23S rRNA genes Length = 5431 Score = 240 bits (121), Expect = 4e-60 Identities = 229/261 (87%), Gaps = 3/261 (1%) Strand = Plus / Plus Query: 127 gacccgaacctgggtgatctatccatgaccaggatgaagcttggatgaaactaagcagag 186 |||||||||| |||||||||| |||||||||||||||||||||| | | || | | || Sbjct: 2719 gacccgaacccgggtgatctaaccatgaccaggatgaagcttgggtaataccacgtgaag 2778 Query: 187 gtccgaaccgactgatgttgaagaatcagcggatgagttgtggttaggggtgaaatgcca 246 |||||||||||| ||||||||| |||| ||||||||||||||||||| |||||||| ||| Sbjct: 2779 gtccgaaccgaccgatgttgaaaaatcggcggatgagttgtggttagcggtgaaatacca 2838 Query: 247 ctcgaacccagagctagctggttctccccgaaatgcgttgaggcgcagcagttgactgga 306 |||||| | ||||||||||||||||||||||||||||||||||||| | || | || Sbjct: 2839 gtcgaactcggagctagctggttctccccgaaatgcgttgaggcgca-cggtcagcaaga 2897 Query: 307 c-atctaggggt-aaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggc 364 | |||||||||| |||||||||||||||||||||| ||| ||| ||||||||||| ||| Sbjct: 2898 ctatctaggggtaaaagcactgtttcggtgcgggccgcgaaagctgtaccaaatcgtggc 2957 Query: 365 aaactctgaatactagatatg 385 ||||||||||||||||||||| Sbjct: 2958 aaactctgaatactagatatg 2978 Score = 93.7 bits (47), Expect = 6e-16 Identities = 143/170 (84%), Gaps = 5/170 (2%) Strand = Plus / Plus Query: 412 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 471 |||||||||||| ||||||||||||||||| || ||||||||||| ||| ||| || Sbjct: 2988 ggccagtgagacagtgggggataagcttcattgta-agagggaaaca-cccagat-ac-- 3042 Query: 472 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 531 |||||||||||||||||| | | |||| |||||||||| | ||| ||||| |||| Sbjct: 3043 gctaaggcccctaaatgattgttaagtggcaaaggaggtgagaatgctcagacaaccaga 3102 Query: 532 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 581 |||||||| |||||||||| | |||||||||||||||||| ||||||||| Sbjct: 3103 aggtttgcttagaagcagcaatcctttaaagagtgcgtaacagctcactg 3152 Score = 50.1 bits (25), Expect = 0.009 Identities = 33/36 (91%) Strand = Plus / Plus Query: 4 ctgnccgcgtgcctgttgaagaatgagccggcgact 39 ||| |||||| |||||||||||||| |||||||||| Sbjct: 2596 ctgaccgcgtacctgttgaagaatgggccggcgact 2631
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 238 bits (120), Expect = 2e-59 Identities = 189/212 (89%) Strand = Plus / Minus Query: 80 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 139 |||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| || Sbjct: 1775853 agccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaacccgg 1775794 Query: 140 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 199 |||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||||| Sbjct: 1775793 gtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgact 1775734 Query: 200 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 259 | |||||| | ||||||||||| |||||||||||||||||||||| |||||||| ||| Sbjct: 1775733 ggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccggag 1775674 Query: 260 ctagctggttctccccgaaatgcgttgaggcg 291 ||||||||||||||||||||| |||||||||| Sbjct: 1775673 ctagctggttctccccgaaatacgttgaggcg 1775642 Score = 238 bits (120), Expect = 2e-59 Identities = 189/212 (89%) Strand = Plus / Plus Query: 80 agccgtagcgaaagcgagtcttaatagggcgattgtcactgcttatggacccgaacctgg 139 |||| |||||||||||||||| ||||||||| |||||| || |||| |||||||||| || Sbjct: 376216 agccatagcgaaagcgagtctgaatagggcgtttgtcagtgtttatagacccgaacccgg 376275 Query: 140 gtgatctatccatgaccaggatgaagcttggatgaaactaagcagaggtccgaaccgact 199 |||||||| ||||| |||||||||||||||| ||| || ||| |||||||||||||||| Sbjct: 376276 gtgatctaaccatggccaggatgaagcttgggtgataccaagtggaggtccgaaccgact 376335 Query: 200 gatgttgaagaatcagcggatgagttgtggttaggggtgaaatgccactcgaacccagag 259 | |||||| | ||||||||||| |||||||||||||||||||||| |||||||| ||| Sbjct: 376336 ggcgttgaaaagccagcggatgagctgtggttaggggtgaaatgccaatcgaacccggag 376395 Query: 260 ctagctggttctccccgaaatgcgttgaggcg 291 ||||||||||||||||||||| |||||||||| Sbjct: 376396 ctagctggttctccccgaaatacgttgaggcg 376427 Score = 167 bits (84), Expect = 5e-38 Identities = 144/164 (87%) Strand = Plus / Minus Query: 426 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 485 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 1775526 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 1775467 Query: 486 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 545 || | | || |||||||||||||||||| |||| ||||| ||||||||||||||||||| Sbjct: 1775466 atcaacactaagtgataaaggaggtgggattgcatagacaaccaggaggtttgcctagaa 1775407 Query: 546 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 589 ||||||| ||| || |||||||||||||||||||| ||||||| Sbjct: 1775406 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcg 1775363 Score = 167 bits (84), Expect = 5e-38 Identities = 144/164 (87%) Strand = Plus / Plus Query: 426 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 485 ||||||||||||| ||| ||||||||||||||||||| || | |||||||||| ||| || Sbjct: 376543 tgggggataagctccatggtcgagagggaaacagcccagaccgccagctaaggtccccaa 376602 Query: 486 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 545 || | | || |||||||||||||||||| |||| ||||| ||||||||||||||||||| Sbjct: 376603 atcaacactaagtgataaaggaggtgggattgcatagacaaccaggaggtttgcctagaa 376662 Query: 546 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 589 ||||||| ||| || |||||||||||||||||||| ||||||| Sbjct: 376663 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcg 376706 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 12 gtgcctgttgaagaatgagccggcgactcataggcagtggc 52 |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 1775915 gtgcctgttgaagaatgagccggcgacttataggcactggc 1775875 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 12 gtgcctgttgaagaatgagccggcgactcataggcagtggc 52 |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 376154 gtgcctgttgaagaatgagccggcgacttataggcactggc 376194 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 327 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 377 ||||||| ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 1775604 tttcggtacgggctgcgagagcggtaccaaatcgagatgaactctgaatac 1775554 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 327 tttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatac 377 ||||||| ||||||||| |||||||||||||||||| |||||||||||| Sbjct: 376465 tttcggtacgggctgcgagagcggtaccaaatcgagatgaactctgaatac 376515 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,648,045 Number of Sequences: 3902068 Number of extensions: 3648045 Number of successful extensions: 71484 Number of sequences better than 10.0: 2902 Number of HSP's better than 10.0 without gapping: 2935 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 53290 Number of HSP's gapped (non-prelim): 17225 length of query: 605 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 582 effective length of database: 17,143,297,704 effective search space: 9977399263728 effective search space used: 9977399263728 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
