ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd24j19
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 155 2e-34
2gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 155 2e-34
3emb|AL713936.4|CNS07YPH Oryza sativa chromosome 12, . BAC OJ1057... 155 2e-34
4gb|AY106229.1| Zea mays PCO149655 mRNA sequence 131 3e-27
5gb|AC120527.3| Oryza sativa (japonica cultivar-group) chromosome... 80 9e-12
6dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 80 9e-12
7gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 80 9e-12
8ref|XM_705137.1| Candida albicans SC5314 putative rRNA methyltra... 48 0.032
9gb|AY560019.1| Thlaspi goesingense metal tolerance protein 1 var... 46 0.13
10gb|AY560017.1| Thlaspi goesingense metal tolerance protein 1 var... 46 0.13
11gb|AC157815.9| Mus musculus chromosome 3, clone RP24-175G5, comp... 46 0.13
12gb|AY044453.2| Thlaspi goesingense putative vacuolar metal-ion t... 46 0.13
13gb|AY044452.2| Thlaspi goesingense putative vacuolar metal-ion t... 46 0.13
14gb|AY680385.1| Picea glauca homeobox transcription factor KN3 (K... 44 0.49
15dbj|AB228353.1| Aspergillus oryzae cDNA, contig sequence: AoEST5226 44 0.49
16dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026 44 0.49
17dbj|AB076248.1| Mus musculus DNA, BAC clone:No.251,465 44 0.49
18emb|AL645531.10| Mouse DNA sequence from clone RP23-191E19 on ch... 44 0.49
19gb|AE017347.1| Cryptococcus neoformans var. neoformans JEC21 chr... 42 2.0
20gb|AY483144.1| Noccaea fendleri heavy metal transporter MTP1 mRN... 42 2.0
21gb|AY483146.1| Thlaspi caerulescens heavy metal transporter MTP1... 42 2.0
22gb|AY560018.1| Thlaspi goesingense metal tolerance protein 1 var... 42 2.0
23ref|XM_743057.1| Aspergillus fumigatus Af293 GPI anchored protei... 42 2.0
24emb|CR626905.5| Zebrafish DNA sequence from clone DKEY-85H21 in ... 42 2.0
25emb|AJ704808.1| Arabidopsis lyrata subsp. petraea partial mRNA f... 42 2.0
26ref|XM_572127.1| Cryptococcus neoformans var. neoformans JEC21 c... 42 2.0
27gb|AF275750.1|AF275750 Thlaspi caerulescens zinc transporter (ZT... 42 2.0
28dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
29dbj|AB117520.1| Filobasidiella neoformans Cnfkh1 mRNA for fork h... 42 2.0
30dbj|AP003622.3| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
31gb|AY311490.1| Thlaspi caerulescens cation-efflux transporter (C... 42 2.0
32gb|L03382.1|RATPHOLA02 Rat phospholamban gene exon 2, complete cds 42 2.0
33gb|AC007548.10| Drosophila melanogaster clone BACR48M17, complet... 40 7.7
34ref|NM_110992.1| Arabidopsis thaliana aldose 1-epimerase AT3G012... 40 7.7
35ref|XM_635835.1| Dictyostelium discoideum hypothetical protein (... 40 7.7
36ref|XM_705132.1| Candida albicans SC5314 putative rRNA methyltra... 40 7.7
37gb|AC008261.5|ATAC008261 Arabidopsis thaliana chromosome III BAC... 40 7.7
38gb|AC010676.6|ATAC010676 Arabidopsis thaliana chromosome III BAC... 40 7.7
39gb|AC101797.5| Mus musculus chromosome 1, clone RP24-211O21, com... 40 7.7
40emb|CR812472.9| Zebrafish DNA sequence from clone DKEY-110G7 in ... 40 7.7
41ref|XM_783080.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 7.7
42emb|AL662920.14| Mouse DNA sequence from clone RP23-98M4 on chro... 40 7.7
43gb|AF452375.2| Rhodococcus aetherivorans strain I24 cosmid 3H1, ... 40 7.7
44dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, co... 40 7.7
45dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 40 7.7
46gb|AE012054.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 7.7
47ref|XM_627337.1| Cryptosporidium parvum Iowa II hypothetical pro... 40 7.7
48gb|AC007836.5|AC007836 Drosophila melanogaster, chromosome 2R, r... 40 7.7
49gb|AC026480.6|AC026480 Arabidopsis thaliana chromosome 1 BAC F15... 40 7.7
50gb|AC079776.5| Homo sapiens BAC clone RP11-315H12 from 2, comple... 40 7.7
51gb|AE003814.3| Drosophila melanogaster chromosome 2R, section 36... 40 7.7
52gb|AE002665.5| Drosophila melanogaster chromosome 3L, section 83... 40 7.7
53gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequ... 40 7.7
54emb|BX005367.10| Zebrafish DNA sequence from clone DKEY-97L20 in... 40 7.7
55emb|AL837515.9| Zebrafish DNA sequence from clone CH211-261F22 i... 40 7.7
56gb|AC134445.3| Mus musculus BAC clone RP24-170M15 from 6, comple... 40 7.7
57gb|AC004045.1|AC004045 Homo sapiens chromosome 4 clone B139M23 m... 40 7.7 
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  155 bits (78), Expect = 2e-34
 Identities = 99/106 (93%)
 Strand = Plus / Minus

                                                                           
Query: 12      cggaacctcaacacaatgattggcagagcagcccacatagaattcctggagactgacatc 71
               |||||||| ||||| ||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 3296170 cggaacctaaacaccatgattggcagagcagcgcacatagagttcctggagactgacatc 3296111

                                                             
Query: 72      tacgccaagttcatcatgtggtccttccctgaactattccgatgac 117
               ||||||||||| ||||||||||||||||||||||| || |||||||
Sbjct: 3296110 tacgccaagtttatcatgtggtccttccctgaactttttcgatgac 3296065



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 89/101 (88%), Gaps = 5/101 (4%)
 Strand = Plus / Minus

                                                                           
Query: 238     ttcgtcaccaagatggatagcactgtaaagttgcctagcagtaac-attttgccagtttg 296
               |||| ||||||||| | ||||||||||||||| |||||||||||| ||||| ||||  ||
Sbjct: 3295968 ttcgacaccaagattggtagcactgtaaagtt-cctagcagtaacgatttttccagcctg 3295910

                                                        
Query: 297     ttagatttgatttgtataaatagtc--gatttgttcatttc 335
               |||||||||| ||||||||||||||  ||||| ||||||||
Sbjct: 3295909 ttagatttga-ttgtataaatagtcctgatttcttcatttc 3295870



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 31/33 (93%), Gaps = 1/33 (3%)
 Strand = Plus / Minus

                                                
Query: 441     gagcttatgtcaaa-taagcatgacatgtgttt 472
               |||||||||||||| ||||||||| ||||||||
Sbjct: 3295769 gagcttatgtcaaaataagcatgatatgtgttt 3295737
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  155 bits (78), Expect = 2e-34
 Identities = 99/106 (93%)
 Strand = Plus / Minus

                                                                           
Query: 12      cggaacctcaacacaatgattggcagagcagcccacatagaattcctggagactgacatc 71
               |||||||| ||||| ||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 3296115 cggaacctaaacaccatgattggcagagcagcgcacatagagttcctggagactgacatc 3296056

                                                             
Query: 72      tacgccaagttcatcatgtggtccttccctgaactattccgatgac 117
               ||||||||||| ||||||||||||||||||||||| || |||||||
Sbjct: 3296055 tacgccaagtttatcatgtggtccttccctgaactttttcgatgac 3296010



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 89/101 (88%), Gaps = 5/101 (4%)
 Strand = Plus / Minus

                                                                           
Query: 238     ttcgtcaccaagatggatagcactgtaaagttgcctagcagtaac-attttgccagtttg 296
               |||| ||||||||| | ||||||||||||||| |||||||||||| ||||| ||||  ||
Sbjct: 3295913 ttcgacaccaagattggtagcactgtaaagtt-cctagcagtaacgatttttccagcctg 3295855

                                                        
Query: 297     ttagatttgatttgtataaatagtc--gatttgttcatttc 335
               |||||||||| ||||||||||||||  ||||| ||||||||
Sbjct: 3295854 ttagatttga-ttgtataaatagtcctgatttcttcatttc 3295815



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 31/33 (93%), Gaps = 1/33 (3%)
 Strand = Plus / Minus

                                                
Query: 441     gagcttatgtcaa-ataagcatgacatgtgttt 472
               ||||||||||||| |||||||||| ||||||||
Sbjct: 3295714 gagcttatgtcaaaataagcatgatatgtgttt 3295682
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>emb|AL713936.4|CNS07YPH Oryza sativa chromosome 12, . BAC OJ1057_G11 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 109081

 Score =  155 bits (78), Expect = 2e-34
 Identities = 99/106 (93%)
 Strand = Plus / Minus

                                                                         
Query: 12    cggaacctcaacacaatgattggcagagcagcccacatagaattcctggagactgacatc 71
             |||||||| ||||| ||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 86556 cggaacctaaacaccatgattggcagagcagcgcacatagagttcctggagactgacatc 86497

                                                           
Query: 72    tacgccaagttcatcatgtggtccttccctgaactattccgatgac 117
             ||||||||||| ||||||||||||||||||||||| || |||||||
Sbjct: 86496 tacgccaagtttatcatgtggtccttccctgaactttttcgatgac 86451



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 89/101 (88%), Gaps = 5/101 (4%)
 Strand = Plus / Minus

                                                                         
Query: 238   ttcgtcaccaagatggatagcactgtaaagttgcctagcagtaac-attttgccagtttg 296
             |||| ||||||||| | ||||||||||||||| |||||||||||| ||||| ||||  ||
Sbjct: 86354 ttcgacaccaagattggtagcactgtaaagtt-cctagcagtaacgatttttccagcctg 86296

                                                      
Query: 297   ttagatttgatttgtataaatagtc--gatttgttcatttc 335
             |||||||||| ||||||||||||||  ||||| ||||||||
Sbjct: 86295 ttagatttga-ttgtataaatagtcctgatttcttcatttc 86256



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 31/33 (93%), Gaps = 1/33 (3%)
 Strand = Plus / Minus

                                              
Query: 441   gagcttatgtcaaa-taagcatgacatgtgttt 472
             |||||||||||||| ||||||||| ||||||||
Sbjct: 86155 gagcttatgtcaaaataagcatgatatgtgttt 86123
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>gb|AY106229.1| Zea mays PCO149655 mRNA sequence
          Length = 1170

 Score =  131 bits (66), Expect = 3e-27
 Identities = 96/106 (90%)
 Strand = Plus / Plus

                                                                       
Query: 12  cggaacctcaacacaatgattggcagagcagcccacatagaattcctggagactgacatc 71
           |||| ||| ||||| ||||||||||| ||||||||||| || ||||| ||||| ||||||
Sbjct: 631 cggagcctgaacaccatgattggcagggcagcccacatcgagttccttgagaccgacatc 690

                                                         
Query: 72  tacgccaagttcatcatgtggtccttccctgaactattccgatgac 117
           |||||||||||||||||||||||||||||||| || ||||||||||
Sbjct: 691 tacgccaagttcatcatgtggtccttccctgacctgttccgatgac 736
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>gb|AC120527.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0011J22 map R10571S, complete sequence
          Length = 154441

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 79/92 (85%)
 Strand = Plus / Minus

                                                                         
Query: 12    cggaacctcaacacaatgattggcagagcagcccacatagaattcctggagactgacatc 71
             |||| ||||||||| ||||| || ||||| || ||||| || |||||||||| |||  | 
Sbjct: 73752 cggagcctcaacaccatgatcgggagagctgctcacatcgagttcctggagaatgatttg 73693

                                             
Query: 72    tacgccaagttcatcatgtggtccttccctga 103
             ||||||| ||||||||||||||||||||||||
Sbjct: 73692 tacgccaggttcatcatgtggtccttccctga 73661
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 79/92 (85%)
 Strand = Plus / Plus

                                                                           
Query: 12      cggaacctcaacacaatgattggcagagcagcccacatagaattcctggagactgacatc 71
               |||| ||||||||| ||||| || ||||| || ||||| || |||||||||| |||  | 
Sbjct: 3241233 cggagcctcaacaccatgatcgggagagctgctcacatcgagttcctggagaatgatttg 3241292

                                               
Query: 72      tacgccaagttcatcatgtggtccttccctga 103
               ||||||| ||||||||||||||||||||||||
Sbjct: 3241293 tacgccaggttcatcatgtggtccttccctga 3241324
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 79/92 (85%)
 Strand = Plus / Plus

                                                                           
Query: 12      cggaacctcaacacaatgattggcagagcagcccacatagaattcctggagactgacatc 71
               |||| ||||||||| ||||| || ||||| || ||||| || |||||||||| |||  | 
Sbjct: 3249938 cggagcctcaacaccatgatcgggagagctgctcacatcgagttcctggagaatgatttg 3249997

                                               
Query: 72      tacgccaagttcatcatgtggtccttccctga 103
               ||||||| ||||||||||||||||||||||||
Sbjct: 3249998 tacgccaggttcatcatgtggtccttccctga 3250029
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>ref|XM_705137.1| Candida albicans SC5314 putative rRNA methyltransferase
           (CaO19.7727), mRNA
          Length = 2562

 Score = 48.1 bits (24), Expect = 0.032
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 112 gatgacgatgaccatgaccatgac 135
           ||||||||||||||||||||||||
Sbjct: 880 gatgacgatgaccatgaccatgac 903
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>gb|AY560019.1| Thlaspi goesingense metal tolerance protein 1 variant c (MTP1)
           gene, MTP1-c allele, complete cds
          Length = 1191

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 113 atgacgatgaccatgaccatgactatg 139
           ||||| |||||||||||||||||||||
Sbjct: 570 atgaccatgaccatgaccatgactatg 544
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>gb|AY560017.1| Thlaspi goesingense metal tolerance protein 1 variant a (MTP1)
           gene, MTP1-a allele, complete cds
          Length = 1173

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 113 atgacgatgaccatgaccatgactatg 139
           ||||| |||||||||||||||||||||
Sbjct: 570 atgaccatgaccatgaccatgactatg 544
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>gb|AC157815.9| Mus musculus chromosome 3, clone RP24-175G5, complete sequence
          Length = 170361

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 113    atgacgatgaccatgaccatgactatg 139
              ||||||||||| |||||||||||||||
Sbjct: 132113 atgacgatgacgatgaccatgactatg 132139



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 111    cgatgacgatgaccatgaccatgac 135
              ||||||||||||||||||| |||||
Sbjct: 132117 cgatgacgatgaccatgactatgac 132141
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>gb|AY044453.2| Thlaspi goesingense putative vacuolar metal-ion transport protein
           MTP1t1 (MTP1) mRNA, complete cds
          Length = 1179

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 113 atgacgatgaccatgaccatgactatg 139
           ||||| |||||||||||||||||||||
Sbjct: 570 atgaccatgaccatgaccatgactatg 544
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>gb|AY044452.2| Thlaspi goesingense putative vacuolar metal-ion transport protein
           MTP1 (MTP1) gene, complete cds
          Length = 1179

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 113 atgacgatgaccatgaccatgactatg 139
           ||||| |||||||||||||||||||||
Sbjct: 570 atgaccatgaccatgaccatgactatg 544
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>gb|AY680385.1| Picea glauca homeobox transcription factor KN3 (Kn3) gene, exons 1,
           2, 3 and partial cds
          Length = 1521

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 113 atgacgatgaccatgaccatgactat 138
           ||||| ||||||||||||||||||||
Sbjct: 272 atgaccatgaccatgaccatgactat 247
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>dbj|AB228353.1| Aspergillus oryzae cDNA, contig sequence: AoEST5226
          Length = 536

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 104 actattccgatgacgatgacca 125
           ||||||||||||||||||||||
Sbjct: 305 actattccgatgacgatgacca 326
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>dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026
          Length = 2324132

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 104    actattccgatgacgatgacca 125
              ||||||||||||||||||||||
Sbjct: 888420 actattccgatgacgatgacca 888399
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>dbj|AB076248.1| Mus musculus DNA, BAC clone:No.251,465
          Length = 158570

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 115  gacgatgaccatgaccatgact 136
            ||||||||||||||||||||||
Sbjct: 2236 gacgatgaccatgaccatgact 2257
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>emb|AL645531.10| Mouse DNA sequence from clone RP23-191E19 on chromosome 4, complete
             sequence
          Length = 97801

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 115   gacgatgaccatgaccatgact 136
             ||||||||||||||||||||||
Sbjct: 18327 gacgatgaccatgaccatgact 18348
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>gb|AE017347.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7, complete
               sequence
          Length = 1347793

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 119     atgaccatgaccatgactatg 139
               |||||||||||||||||||||
Sbjct: 1267368 atgaccatgaccatgactatg 1267388
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>gb|AY483144.1| Noccaea fendleri heavy metal transporter MTP1 mRNA, complete cds
          Length = 1179

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 119 atgaccatgaccatgactatg 139
           |||||||||||||||||||||
Sbjct: 564 atgaccatgaccatgactatg 544
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>gb|AY483146.1| Thlaspi caerulescens heavy metal transporter MTP1 mRNA, complete
           cds
          Length = 1191

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 119 atgaccatgaccatgactatg 139
           |||||||||||||||||||||
Sbjct: 564 atgaccatgaccatgactatg 544
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>gb|AY560018.1| Thlaspi goesingense metal tolerance protein 1 variant b (MTP1)
           gene, MTP1-b allele, complete cds
          Length = 1173

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 119 atgaccatgaccatgactatg 139
           |||||||||||||||||||||
Sbjct: 564 atgaccatgaccatgactatg 544
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>ref|XM_743057.1| Aspergillus fumigatus Af293 GPI anchored protein (Afu5g01920)
           partial mRNA
          Length = 618

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 111 cgatgacgatgaccatgaccatgac 135
           |||||| ||||||||||||||||||
Sbjct: 285 cgatgatgatgaccatgaccatgac 309
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>emb|CR626905.5| Zebrafish DNA sequence from clone DKEY-85H21 in linkage group 15,
              complete sequence
          Length = 201465

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 290    cagtttgttagatttgatttg 310
              |||||||||||||||||||||
Sbjct: 164509 cagtttgttagatttgatttg 164529
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>emb|AJ704808.1| Arabidopsis lyrata subsp. petraea partial mRNA for putative zinc
           transport protein MTP1-2
          Length = 256

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 119 atgaccatgaccatgactatg 139
           |||||||||||||||||||||
Sbjct: 183 atgaccatgaccatgactatg 163
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>ref|XM_572127.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7
          Length = 2676

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 119  atgaccatgaccatgactatg 139
            |||||||||||||||||||||
Sbjct: 2241 atgaccatgaccatgactatg 2221
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>gb|AF275750.1|AF275750 Thlaspi caerulescens zinc transporter (ZTP1) mRNA, complete cds
          Length = 1353

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 119 atgaccatgaccatgactatg 139
           |||||||||||||||||||||
Sbjct: 614 atgaccatgaccatgactatg 594
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 113      atgacgatgaccatgaccatgacta 137
                ||||| |||||||||||||||||||
Sbjct: 22761993 atgaccatgaccatgaccatgacta 22761969
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>dbj|AB117520.1| Filobasidiella neoformans Cnfkh1 mRNA for fork head domain protein,
            complete cds
          Length = 3055

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 119  atgaccatgaccatgactatg 139
            |||||||||||||||||||||
Sbjct: 2580 atgaccatgaccatgactatg 2560
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>dbj|AP003622.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0633E08
          Length = 136471

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 113   atgacgatgaccatgaccatgacta 137
             ||||| |||||||||||||||||||
Sbjct: 48944 atgaccatgaccatgaccatgacta 48920
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>gb|AY311490.1| Thlaspi caerulescens cation-efflux transporter (CET1) mRNA,
           complete cds
          Length = 1191

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 119 atgaccatgaccatgactatg 139
           |||||||||||||||||||||
Sbjct: 564 atgaccatgaccatgactatg 544
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>gb|L03382.1|RATPHOLA02 Rat phospholamban gene exon 2, complete cds
          Length = 1786

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 111  cgatgacgatgaccatgaccatgac 135
            ||||||||||||||||||| |||||
Sbjct: 1461 cgatgacgatgaccatgacgatgac 1485
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>gb|AC007548.10| Drosophila melanogaster clone BACR48M17, complete sequence
          Length = 160022

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 527    atgtcatgtagttgttgatc 546
              ||||||||||||||||||||
Sbjct: 107939 atgtcatgtagttgttgatc 107920
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>ref|NM_110992.1| Arabidopsis thaliana aldose 1-epimerase AT3G01260 mRNA, complete
           cds
          Length = 1205

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 111 cgatgacgatgaccatgaccatga 134
           ||||||||||||||||||| ||||
Sbjct: 156 cgatgacgatgaccatgacgatga 179
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>ref|XM_635835.1| Dictyostelium discoideum hypothetical protein (DDB0204126), partial
            mRNA
          Length = 8193

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 112  gatgacgatgaccatgaccatgac 135
            |||||| |||||||||||||||||
Sbjct: 2083 gatgaccatgaccatgaccatgac 2060
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>ref|XM_705132.1| Candida albicans SC5314 putative rRNA methyltransferase (CaO19.76),
           mRNA
          Length = 2538

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 112 gatgacgatgaccatgacca 131
           ||||||||||||||||||||
Sbjct: 880 gatgacgatgaccatgacca 899
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>gb|AC008261.5|ATAC008261 Arabidopsis thaliana chromosome III BAC T4P13 genomic sequence,
             complete sequence
          Length = 93735

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 111   cgatgacgatgaccatgaccatga 134
             ||||||||||||||||||| ||||
Sbjct: 15369 cgatgacgatgaccatgacgatga 15392
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>gb|AC010676.6|ATAC010676 Arabidopsis thaliana chromosome III BAC T22N4 genomic sequence,
             complete sequence
          Length = 58448

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 111   cgatgacgatgaccatgaccatga 134
             ||||||||||||||||||| ||||
Sbjct: 57015 cgatgacgatgaccatgacgatga 57038
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>gb|AC101797.5| Mus musculus chromosome 1, clone RP24-211O21, complete sequence
          Length = 169292

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 269   tgcctagcagtaacattttg 288
             ||||||||||||||||||||
Sbjct: 95687 tgcctagcagtaacattttg 95668
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>emb|CR812472.9| Zebrafish DNA sequence from clone DKEY-110G7 in linkage group 3, complete
              sequence
          Length = 194804

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 387    tggtgtggtgtattttaggg 406
              ||||||||||||||||||||
Sbjct: 178773 tggtgtggtgtattttaggg 178792
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>ref|XM_783080.1| PREDICTED: Strongylocentrotus purpuratus similar to leucine-rich
            repeat-containing G protein-coupled receptor 8
            (predicted) (LOC583155), mRNA
          Length = 1896

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 9    aggcggaacctcaacacaat 28
            ||||||||||||||||||||
Sbjct: 1845 aggcggaacctcaacacaat 1864
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>emb|AL662920.14| Mouse DNA sequence from clone RP23-98M4 on chromosome 1 Contains part of
              the gene for ortholog of human amyotrophic lateral
              sclerosis 2 (juvenile) chromosome region candidate 19
              (ALS2CR19) and a novel gene, complete sequence
          Length = 146582

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 269    tgcctagcagtaacattttg 288
              ||||||||||||||||||||
Sbjct: 113017 tgcctagcagtaacattttg 113036
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>gb|AF452375.2| Rhodococcus aetherivorans strain I24 cosmid 3H1, partial sequence
          Length = 6437

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 112  gatgacgatgaccatgaccatgac 135
            |||||| |||||||||||||||||
Sbjct: 1037 gatgaccatgaccatgaccatgac 1014
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>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome
          Length = 5727534

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 119    atgaccatgaccatgactatgctc 142
              ||||||||||||||||| ||||||
Sbjct: 110414 atgaccatgaccatgaccatgctc 110437
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>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 112    gatgacgatgaccatgaccatgac 135
              |||||| |||||||||||||||||
Sbjct: 375244 gatgaccatgaccatgaccatgac 375267
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>gb|AE012054.1| Xanthomonas axonopodis pv. citri str. 306,  section 432 of 469 of the
            complete genome
          Length = 14572

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 112  gatgacgatgaccatgaccatgac 135
            |||||| |||||||||||||||||
Sbjct: 8786 gatgaccatgaccatgaccatgac 8763



 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 113  atgacgatgaccatgaccatgact 136
            ||||| ||||||||||||||||||
Sbjct: 8749 atgaccatgaccatgaccatgact 8726
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>ref|XM_627337.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd8_4510),
           partial mRNA
          Length = 3237

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 113 atgacgatgaccatgaccatgactatgc 140
           ||||| ||||||||||||||||| ||||
Sbjct: 738 atgaccatgaccatgaccatgaccatgc 711
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>gb|AC007836.5|AC007836 Drosophila melanogaster, chromosome 2R, region 50F-51C, BAC clone
             BACR06D02, complete sequence
          Length = 172791

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 112   gatgacgatgaccatgacca 131
             ||||||||||||||||||||
Sbjct: 33264 gatgacgatgaccatgacca 33283
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>gb|AC026480.6|AC026480 Arabidopsis thaliana chromosome 1 BAC F15E12 genomic sequence, complete
             sequence
          Length = 90248

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 111   cgatgacgatgaccatgaccatgactat 138
             ||||||||||||| ||||| ||||||||
Sbjct: 79901 cgatgacgatgacgatgacgatgactat 79928
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>gb|AC079776.5| Homo sapiens BAC clone RP11-315H12 from 2, complete sequence
          Length = 198961

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 113   atgacgatgaccatgaccatgactatgc 140
             ||||| ||||||||||||||||| ||||
Sbjct: 69111 atgaccatgaccatgaccatgaccatgc 69138
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>gb|AE003814.3| Drosophila melanogaster chromosome 2R, section 36 of 73 of the complete
             sequence
          Length = 254438

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 112   gatgacgatgaccatgacca 131
             ||||||||||||||||||||
Sbjct: 69120 gatgacgatgaccatgacca 69139
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>gb|AE002665.5| Drosophila melanogaster chromosome 3L, section 83 of 83 of the complete
              sequence
          Length = 491220

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 527    atgtcatgtagttgttgatc 546
              ||||||||||||||||||||
Sbjct: 149873 atgtcatgtagttgttgatc 149892
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>gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequence
          Length = 2906179

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 112    gatgacgatgaccatgaccatgac 135
              |||||| |||||||||||||||||
Sbjct: 338705 gatgaccatgaccatgaccatgac 338682
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>emb|BX005367.10| Zebrafish DNA sequence from clone DKEY-97L20 in linkage group 22,
              complete sequence
          Length = 243709

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 333    ttcgatttatagtcctgtag 352
              ||||||||||||||||||||
Sbjct: 238250 ttcgatttatagtcctgtag 238269
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>emb|AL837515.9| Zebrafish DNA sequence from clone CH211-261F22 in linkage group 5,
             complete sequence
          Length = 153980

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 387   tggtgtggtgtattttaggg 406
             ||||||||||||||||||||
Sbjct: 32932 tggtgtggtgtattttaggg 32913
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>gb|AC134445.3| Mus musculus BAC clone RP24-170M15 from 6, complete sequence
          Length = 165568

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 113    atgacgatgaccatgaccatgact 136
              ||||| ||||||||||||||||||
Sbjct: 126869 atgaccatgaccatgaccatgact 126846
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>gb|AC004045.1|AC004045 Homo sapiens chromosome 4 clone B139M23 map 4q25, complete sequence
          Length = 106346

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 280  aacattttgccagtttgtta 299
            ||||||||||||||||||||
Sbjct: 3994 aacattttgccagtttgtta 4013


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,596,029
Number of Sequences: 3902068
Number of extensions: 4596029
Number of successful extensions: 84175
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 83789
Number of HSP's gapped (non-prelim): 356
length of query: 568
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 545
effective length of database: 17,143,297,704
effective search space: 9343097248680
effective search space used: 9343097248680
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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