ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd24j15 |
|---|---|
| Clone Library Name | barley_pub |
>PFA4_KLULA (Q6CUB5) Palmitoyltransferase PFA4 (EC 2.3.1.-) (Protein fatty| acyltransferase 4) Length = 377 Score = 32.7 bits (73), Expect = 0.47 Identities = 17/58 (29%), Positives = 23/58 (39%) Frame = -2 Query: 225 EWWKDHCTLIRWRFPKIARHAPASRSCIRVFENHCRVWT*N*AAVHMMLPGIANFAQW 52 E W ++C R P+ A H C+ ++HC WT N H P F W Sbjct: 74 EEWHNYCKKCRVYKPERAHHCKTCNQCVLAMDHHC-PWTLN-CVGHSNFPHFMRFLFW 129
>PFA4_ASHGO (Q75CB4) Palmitoyltransferase PFA4 (EC 2.3.1.-) (Protein fatty| acyltransferase 4) Length = 375 Score = 31.6 bits (70), Expect = 1.1 Identities = 13/48 (27%), Positives = 22/48 (45%) Frame = -2 Query: 219 WKDHCTLIRWRFPKIARHAPASRSCIRVFENHCRVWT*N*AAVHMMLP 76 W+++CT P+ H C+ V ++HC WT N + + P Sbjct: 76 WQNYCTKCETYKPERTHHCKRCNQCVLVMDHHC-PWTMNCLGLQYLAP 122
>1A110_ARATH (Q9LQ10) Probable aminotransferase ACS10 (EC 2.6.1.-)| Length = 557 Score = 30.8 bits (68), Expect = 1.8 Identities = 31/102 (30%), Positives = 40/102 (39%), Gaps = 3/102 (2%) Frame = +2 Query: 38 PSGHLHCAKLAMPG---NIIWTAAQFHVQTLQWFSNTRMQLRLAGACLAILGNLHLINVQ 208 PS L K+A+ G + F L S + + CLA GN L+ Sbjct: 208 PSDGLLELKMAVAGFMTEATKNSVTFDPSQLVLTSGASSAIEILSFCLADSGNAFLVPTP 267 Query: 209 WSFHHSTRRKLYTAVIQMGHM*CRSTDILVAVMGFLDRAVYQ 334 S + K T V + H+ CRS D M LDRA YQ Sbjct: 268 CSPGYDRDVKWRTGV-DIIHVPCRSADNFNMSMVVLDRAFYQ 308
>CLTR2_MOUSE (Q920A1) Cysteinyl leukotriene receptor 2 (CysLTR2)| Length = 309 Score = 29.3 bits (64), Expect = 5.2 Identities = 18/64 (28%), Positives = 29/64 (45%) Frame = -2 Query: 324 ALSRKPITATRISVLRHHICPIWMTAVYSLRRVEWWKDHCTLIRWRFPKIARHAPASRSC 145 A RK +T I+++ +C + A+ +L V W KD C + + I A+ SC Sbjct: 224 AAHRKALTTIVIAMITFLLCFLPYHALRTLHLVTWDKDSCGDVLHKATVITLTMAAANSC 283 Query: 144 IRVF 133 F Sbjct: 284 FNPF 287
>Y3478_ARATH (Q9SQZ9) Protein At3g04780| Length = 176 Score = 28.5 bits (62), Expect = 8.9 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Frame = +1 Query: 88 MDGSSISCPNPTMVFEHPNAAPAGWRV-PGYFREPPPDQRAVVFPPFN 228 +D S + C N + PNA G+R G E D++ +++ PFN Sbjct: 20 IDWSGVECLNQSSSHSLPNALKQGYREDEGLNLESDADEQLLIYIPFN 67
>YG3K_YEAST (P48235) Hypothetical 24.0 kDa protein in MOL1-NAT2 intergenic| region Length = 211 Score = 28.5 bits (62), Expect = 8.9 Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 3/48 (6%) Frame = +1 Query: 259 DGAYVMPQYRYSGGSNGFPR*GSLSDDNCIVEQLITDH---WFWLETT 393 D +Y + + G N PR L DD+ I +Q+I ++ WF L ++ Sbjct: 164 DSSYQLHSKAHLGYENNLPRSNDLIDDHLISDQIIENNYNLWFRLSSS 211
>ERFB_ASHGO (Q750R7) Palmitoyltransferase ERF2 (EC 2.3.1.-) (DHHC cysteine-rich| domain-containing protein ERF2) (Ras protein acyltransferase) Length = 367 Score = 28.5 bits (62), Expect = 8.9 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%) Frame = -2 Query: 210 HCTLIR-WRFPKIARHAPASRSCIRVFENHC 121 +CT R WR P+ A H SCI F++HC Sbjct: 186 YCTTCRIWRPPR-ASHCAVCDSCILSFDHHC 215
>DVL3_MOUSE (Q61062) Segment polarity protein dishevelled homolog DVL-3| (Dishevelled-3) (DSH homolog 3) Length = 716 Score = 28.5 bits (62), Expect = 8.9 Identities = 24/81 (29%), Positives = 32/81 (39%), Gaps = 1/81 (1%) Frame = +1 Query: 64 VGNAWQHHMDGSSISCPNPTMV-FEHPNAAPAGWRVPGYFREPPPDQRAVVFPPFNSSQT 240 + N H DGSS + T+ HP AAP W + ++ PPP P+N Sbjct: 501 MANLSLHDHDGSSGASDQDTLAPLPHPGAAP--WPMAFPYQYPPPPH------PYN---- 548 Query: 241 IYRRHPDGAYVMPQYRYSGGS 303 P + Y Y GGS Sbjct: 549 -----PHPGFPELGYSYGGGS 564
>DVL3_HUMAN (Q92997) Segment polarity protein dishevelled homolog DVL-3| (Dishevelled-3) (DSH homolog 3) Length = 716 Score = 28.5 bits (62), Expect = 8.9 Identities = 24/81 (29%), Positives = 32/81 (39%), Gaps = 1/81 (1%) Frame = +1 Query: 64 VGNAWQHHMDGSSISCPNPTMV-FEHPNAAPAGWRVPGYFREPPPDQRAVVFPPFNSSQT 240 + N H DGSS + T+ HP AAP W + ++ PPP P+N Sbjct: 501 MANLSLHDHDGSSGASDQDTLAPLPHPGAAP--WPMAFPYQYPPPPH------PYN---- 548 Query: 241 IYRRHPDGAYVMPQYRYSGGS 303 P + Y Y GGS Sbjct: 549 -----PHPGFPELGYSYGGGS 564
>SSBP3_MOUSE (Q9D032) Single-stranded DNA-binding protein 3 (Sequence-specific| single-stranded-DNA-binding protein) (Lck-associated signal transducer) Length = 388 Score = 28.5 bits (62), Expect = 8.9 Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 5/75 (6%) Frame = +1 Query: 91 DGSSISCPNPTMVFEHPN-AAPAGWRVPGYFREPPPDQRA--VVFPPFNSSQTIYRRHPD 261 D S+ + P+P + PN P G PG+F+ PP Q + PP N S + Sbjct: 91 DYSAAAAPSPVLGNIPPNDGMPGGPIPPGFFQGPPGSQPSPHAQPPPHNPSSMM------ 144 Query: 262 GAYVMP--QYRYSGG 300 G + P RY+GG Sbjct: 145 GPHSQPFMSPRYAGG 159
>SSBP3_HUMAN (Q9BWW4) Single-stranded DNA-binding protein 3 (Sequence-specific| single-stranded-DNA-binding protein) Length = 388 Score = 28.5 bits (62), Expect = 8.9 Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 5/75 (6%) Frame = +1 Query: 91 DGSSISCPNPTMVFEHPN-AAPAGWRVPGYFREPPPDQRA--VVFPPFNSSQTIYRRHPD 261 D S+ + P+P + PN P G PG+F+ PP Q + PP N S + Sbjct: 91 DYSAAAAPSPVLGNIPPNDGMPGGPIPPGFFQGPPGSQPSPHAQPPPHNPSSMM------ 144 Query: 262 GAYVMP--QYRYSGG 300 G + P RY+GG Sbjct: 145 GPHSQPFMSPRYAGG 159
>PFA4_CANGA (Q6FVE6) Palmitoyltransferase PFA4 (EC 2.3.1.-) (Protein fatty| acyltransferase 4) Length = 376 Score = 28.5 bits (62), Expect = 8.9 Identities = 11/39 (28%), Positives = 19/39 (48%) Frame = -2 Query: 219 WKDHCTLIRWRFPKIARHAPASRSCIRVFENHCRVWT*N 103 WK +C + P+ + H C+ + ++HC WT N Sbjct: 76 WKVYCKKCKCYKPERSHHCKTCNQCVLMMDHHC-PWTMN 113 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 80,319,867 Number of Sequences: 219361 Number of extensions: 1864962 Number of successful extensions: 4442 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 4281 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4434 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 3026354448 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
