>ref|NM_189847.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1644

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                              
Query: 33   gaggccccagcggccacctccattgcgcgaagttggcaatgcctggcaac 82
            |||||||||| ||||||||||||| || |||||||||||||||| |||||
Sbjct: 1296 gaggccccagaggccacctccattccgtgaagttggcaatgcctcgcaac 1345



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                               
Query: 267  atatgtgatgccgcagtacagatattctggtggcagtaatgggtttcctcg 317
            |||||||||||| |||| ||||||||||||||| || ||||| ||||||||
Sbjct: 1590 atatgtgatgccacagttcagatattctggtggtagcaatggttttcctcg 1640

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                                  
Query: 33       gaggccccagcggccacctccattgcgcgaagttggcaatgcctggcaac 82
                |||||||||| ||||||||||||| || |||||||||||||||| |||||
Sbjct: 25558991 gaggccccagaggccacctccattccgtgaagttggcaatgcctcgcaac 25558942



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                        
Query: 267      atatgtgatgccgcagtacagatattctggtggcagtaatgggtttcctcgatagg 322
                |||||||||||| |||| ||||||||||||||| || ||||| |||||||| ||||
Sbjct: 25558697 atatgtgatgccacagttcagatattctggtggtagcaatggttttcctcggtagg 25558642

>dbj|AP004380.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0594D10
          Length = 143200

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                               
Query: 33    gaggccccagcggccacctccattgcgcgaagttggcaatgcctggcaac 82
             |||||||||| ||||||||||||| || |||||||||||||||| |||||
Sbjct: 12964 gaggccccagaggccacctccattccgtgaagttggcaatgcctcgcaac 12915



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                     
Query: 267   atatgtgatgccgcagtacagatattctggtggcagtaatgggtttcctcgatagg 322
             |||||||||||| |||| ||||||||||||||| || ||||| |||||||| ||||
Sbjct: 12670 atatgtgatgccacagttcagatattctggtggtagcaatggttttcctcggtagg 12615

>dbj|AP004309.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0560B08
          Length = 128098

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                               
Query: 33    gaggccccagcggccacctccattgcgcgaagttggcaatgcctggcaac 82
             |||||||||| ||||||||||||| || |||||||||||||||| |||||
Sbjct: 96261 gaggccccagaggccacctccattccgtgaagttggcaatgcctcgcaac 96212



 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                     
Query: 267   atatgtgatgccgcagtacagatattctggtggcagtaatgggtttcctcgatagg 322
             |||||||||||| |||| ||||||||||||||| || ||||| |||||||| ||||
Sbjct: 95967 atatgtgatgccacagttcagatattctggtggtagcaatggttttcctcggtagg 95912

>gb|AC113063.8| Mus musculus chromosome 15, clone RP23-261F24, complete sequence
          Length = 218490

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 99     ctcaatttcatgtccaaaccct 120
              ||||||||||||||||||||||
Sbjct: 136985 ctcaatttcatgtccaaaccct 136964

>gb|AC163100.4| Mus musculus chromosome 15, clone RP23-404G8, complete sequence
          Length = 199486

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 99     ctcaatttcatgtccaaaccct 120
              ||||||||||||||||||||||
Sbjct: 173900 ctcaatttcatgtccaaaccct 173921

>emb|CR356234.11| Zebrafish DNA sequence from clone CH211-93J11 in linkage group 2,
              complete sequence
          Length = 151567

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 407    atgtttgtgagggcattccaa 427
              |||||||||||||||||||||
Sbjct: 132206 atgtttgtgagggcattccaa 132226

>emb|AL445649.15| Human DNA sequence from clone RP11-381O6 on chromosome 13, complete
              sequence
          Length = 190126

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 373    tggttctggttggagaccactgtaa 397
              |||||||||||||||||| ||||||
Sbjct: 158975 tggttctggttggagacccctgtaa 158951

>gb|AC160825.3| Xenopus tropicalis clone ISB1-168O21, complete sequence
          Length = 102150

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 335   atgacaattgcattgttgaac 355
             |||||||||||||||||||||
Sbjct: 73646 atgacaattgcattgttgaac 73666

>gb|AC157095.9| Mus musculus 6 BAC RP24-350P11 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 177800

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 275    tgccgcagtacagatattctg 295
              |||||||||||||||||||||
Sbjct: 117331 tgccgcagtacagatattctg 117351

>gb|AC164110.4| Mus musculus BAC clone RP23-307N19 from chromosome 12, complete
             sequence
          Length = 201050

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 64    gttggcaatgcctggcaaca 83
             ||||||||||||||||||||
Sbjct: 21282 gttggcaatgcctggcaaca 21301

>gb|AF131866.2| Mus musculus chromosome X clone CT7-271B7 map qA7.1, complete
           sequence
          Length = 110310

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 340 aattgcattgttgaacaatt 359
           ||||||||||||||||||||
Sbjct: 814 aattgcattgttgaacaatt 833

>gb|AC124212.2| Mus musculus chromosome X clone CT7-532E7 map qA7.1, complete sequence
          Length = 109783

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 340   aattgcattgttgaacaatt 359
             ||||||||||||||||||||
Sbjct: 84775 aattgcattgttgaacaatt 84794

>gb|AC134596.3| Mus musculus BAC clone RP23-435C1 from chromosome 12, complete sequence
          Length = 193068

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 64    gttggcaatgcctggcaaca 83
             ||||||||||||||||||||
Sbjct: 86937 gttggcaatgcctggcaaca 86918

>emb|AL591503.9| Human DNA sequence from clone RP11-571E6 on chromosome Xp11.22-11.3
             Contains a nicolin 1 (NICN1) pseudogene, a novel gene, the
             5'end of the ZNF157 gene for zinc finger protein 157
             (HZF22) and a UBX domain containing 2 (UBXD2) pseudogene,
             complete sequence
          Length = 152659

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 388   accactgtaattgacgtgga 407
             ||||||||||||||||||||
Sbjct: 46576 accactgtaattgacgtgga 46595

>emb|Z70678.1|SCXV55KB S.cerevisiae chromosome XV DNA, 54.7 kb region
          Length = 54719

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 336   tgacaattgcattgttgaacaatt 359
             ||||||||||||| ||||||||||
Sbjct: 43145 tgacaattgcatttttgaacaatt 43122

>gb|J02706.1|YSCTIMP1A Saccharomyces cerevisiae thymidylate synthase (TIMP1) gene, complete
            cds
          Length = 1813

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 336  tgacaattgcattgttgaacaatt 359
            ||||||||||||| ||||||||||
Sbjct: 1776 tgacaattgcatttttgaacaatt 1799

>emb|BX914216.14| Zebrafish DNA sequence from clone RP71-25N17 in linkage group 18,
             complete sequence
          Length = 72914

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 324   cagtttatcagatgacaatt 343
             ||||||||||||||||||||
Sbjct: 20584 cagtttatcagatgacaatt 20603

>gb|AC092630.3| Homo sapiens BAC clone RP11-321C18 from 2, complete sequence
          Length = 185947

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 363   tactgatcactggttctggt 382
             ||||||||||||||||||||
Sbjct: 34742 tactgatcactggttctggt 34761

>gb|AC026358.36| Homo sapiens 12 BAC RP11-522N14 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 146128

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 327   tttatcagatgacaattgca 346
             ||||||||||||||||||||
Sbjct: 34249 tttatcagatgacaattgca 34230

>gb|AF500299.1| Python curtus endogenous retrovirus Gag-Pro-Pol protein gene, partial
            cds
          Length = 2829

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 210  ggtctttccaccattcaact 229
            ||||||||||||||||||||
Sbjct: 1842 ggtctttccaccattcaact 1861

>gb|AF500296.1| Python molurus endogenous retrovirus Gag-Pro-Pol protein and Env
            genes, complete cds
          Length = 7050

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 210  ggtctttccaccattcaact 229
            ||||||||||||||||||||
Sbjct: 3181 ggtctttccaccattcaact 3200

>emb|BX908395.15| Zebrafish DNA sequence from clone DKEY-242H9 in linkage group 18,
             complete sequence
          Length = 130348

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 324   cagtttatcagatgacaatt 343
             ||||||||||||||||||||
Sbjct: 60138 cagtttatcagatgacaatt 60119

>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome
          Length = 2702173

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 138     cccgaatgcagctccggctg 157
               ||||||||||||||||||||
Sbjct: 1833850 cccgaatgcagctccggctg 1833831

>emb|Z74981.1|SCYOR073W S.cerevisiae chromosome XV reading frame ORF YOR073w
          Length = 4858

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 336  tgacaattgcattgttgaacaatt 359
            ||||||||||||| ||||||||||
Sbjct: 4497 tgacaattgcatttttgaacaatt 4474

>emb|AL807816.7| Mouse DNA sequence from clone RP23-13H12 on chromosome X, complete
             sequence
          Length = 193219

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 340   aattgcattgttgaacaatt 359
             ||||||||||||||||||||
Sbjct: 20055 aattgcattgttgaacaatt 20074


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,467,019
Number of Sequences: 3902068
Number of extensions: 3467019
Number of successful extensions: 60838
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 60762
Number of HSP's gapped (non-prelim): 76
length of query: 466
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 444
effective length of database: 17,147,199,772
effective search space: 7613356698768
effective search space used: 7613356698768
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)