Clone Information

BLAST Search Result

Clone Name	basd24j10
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	dbj\|AP001918.1\| Plasmid F genomic DNA, complete sequence	1233	0.0
2	gb\|AF457204.1\|AF457204 Escherichia coli Cr(VI) reductase gene, c...	1233	0.0
3	gb\|AC103582.17\| Homo sapiens chromosome 22 clone ll22nc01-74c1 m...	1233	0.0
4	emb\|X60200.1\|ECTN1000 E. coli transposon Tn1000 (gamma delta) tn...	1233	0.0
5	dbj\|D16449.1\|ECOTNPA Escherichia coli transposon gamma delta tnp...	1233	0.0
6	emb\|AL078473.2\|HS2A11 Homo sapiens chromosome 21 Cosmid LLNCO21A...	1233	0.0
7	emb\|X96404.1\|NITNREPSQ N.indica repetitive sequence, homologous ...	648	0.0
8	gb\|M93663.1\|MUSRNADALK Mouse RNA-dependent EIF-2 alpha kinase, c...	636	e-179
9	gb\|L43071.1\|ETAHLYA Edwardsiella tarda hlyA gene, ORFs, complete...	597	e-167
10	gb\|U62442.1\|AAU62442 Alternaria alternata allergen r Alt a 2 (r ...	96	2e-16
11	gb\|AC093575.2\| Homo sapiens chromosome 1 clone RP11-40C18, compl...	46	0.15
12	emb\|BX640658.1\|HSM806714 Homo sapiens mRNA; cDNA DKFZp313N0119 (...	46	0.15
13	gb\|AE014304.1\| Homo sapiens chromosome 13q34 schizophrenia regio...	44	0.59
14	emb\|AL161771.17\| Human DNA sequence from clone RP11-11L8 on chro...	44	0.59
15	ref\|XM_475518.1\| Oryza sativa (japonica cultivar-group), predic...	42	2.3
16	gb\|AC093088.4\| Oryza sativa (japonica cultivar-group) chromosome...	42	2.3
17	gb\|CP000099.1\| Methanosarcina barkeri str. fusaro chromosome 1, ...	42	2.3
18	gb\|AC138716.2\| Mus musculus BAC clone RP23-241B5 from chromosome...	42	2.3
19	gb\|DP000009.1\| Oryza sativa (japonica cultivar-group) chromosome 3	42	2.3
20	emb\|AL161899.21\| Human DNA sequence from clone RP11-418I10 on ch...	42	2.3
21	gb\|AE014181.1\| Mus musculus piebald deletion region section 9 of...	42	2.3
22	gb\|AC127456.2\| Homo sapiens chromosome 16 clone CTD-3175N14, com...	42	2.3
23	gb\|AC023713.4\| Drosophila melanogaster X BAC RP98-24A2 (Roswell ...	42	2.3
24	gb\|AC010057.7\| Drosophila melanogaster 3L BAC RP98-26C18 (Roswel...	42	2.3
25	gb\|AC106779.3\| Homo sapiens chromosome 16 clone RP11-343H19, com...	42	2.3
26	gb\|AC091219.2\| Drosophila melanogaster 3L BAC RP98-4C3 (Roswell ...	42	2.3
27	gb\|AC134241.2\| Oryza sativa (japonica cultivar-group) chromosome...	42	2.3
28	gb\|AC135158.2\| Oryza sativa (japonica cultivar-group) chromosome...	42	2.3
29	dbj\|AP008211.1\| Oryza sativa (japonica cultivar-group) genomic D...	42	2.3
30	dbj\|AP008209.1\| Oryza sativa (japonica cultivar-group) genomic D...	42	2.3
31	gb\|AE003469.3\| Drosophila melanogaster chromosome 3L, section 3 ...	42	2.3
32	gb\|AE003442.3\| Drosophila melanogaster chromosome X, section 26 ...	42	2.3
33	emb\|X17550.1\|DMSING3 D. melanogaster singed gene, exons 3, 4, 5 & 6	42	2.3
34	emb\|AM233362.1\| Francisella tularensis subsp. holarctica strain ...	42	2.3
35	emb\|AJ749949.1\| Francisella tularensis subsp. tularensis SCHU S4...	42	2.3
36	gb\|AC093089.1\| Oryza sativa (japonica cultivar-group) chromosome...	42	2.3
37	gb\|AC163738.5\| Pan troglodytes BAC clone CH251-479G24 from chrom...	40	9.2
38	gb\|AC094830.5\| Rattus norvegicus 8 BAC CH230-3H18 (Children's Ho...	40	9.2
39	gb\|AC161056.5\| Mus musculus BAC clone RP23-241J7 from chromosome...	40	9.2
40	emb\|Z82062.1\|CEW02A11 Caenorhabditis elegans Cosmid W02A11, comp...	40	9.2
41	gb\|AC124458.5\| Mus musculus BAC clone RP24-136E11 from chromosom...	40	9.2
42	gb\|DQ383815.1\| Helianthus annuus cultivar line HA383 chloroplast...	40	9.2
43	gb\|AC125453.6\| Homo sapiens chromosome 8, clone RP11-1049H7, com...	40	9.2
44	emb\|AL008866.1\|CEB0019 Caenorhabditis elegans Cosmid B0019, comp...	40	9.2
45	ref\|XM_642749.1\| Entamoeba histolytica HM-1:IMSS WD repeat prote...	40	9.2
46	ref\|XM_536487.2\| PREDICTED: Canis familiaris similar to 3-oxoaci...	40	9.2
47	gb\|AE004096.1\| Vibrio cholerae O1 biovar eltor str. N16961 chrom...	40	9.2
48	emb\|AL603902.4\| Human DNA sequence from clone RP11-167I10 on chr...	40	9.2
49	emb\|AL445923.10\| Human DNA sequence from clone RP11-117N4 on chr...	40	9.2
50	emb\|AL162574.14\| Human DNA sequence from clone RP11-282A11 on ch...	40	9.2
51	emb\|AL139220.13\| Human DNA sequence from clone RP5-1198O20 on ch...	40	9.2
52	emb\|AL139140.11\| Human DNA sequence from clone RP5-1071P19 on ch...	40	9.2
53	gb\|AY509253.1\| Ostreid herpesvirus 1, complete genome	40	9.2
54	emb\|CR382401.1\| Plasmodium falciparum chromosome 6, complete seq...	40	9.2
55	emb\|BX950851.1\| Erwinia carotovora subsp. atroseptica SCRI1043, ...	40	9.2
56	emb\|BX295539.1\|NCB1D14 Neurospora crassa genomic DNA, BAC contig...	40	9.2
57	gb\|AF448416.1\| Zea mays B73 chromosome 9S bz genomic region	40	9.2
58	gb\|AC073613.16\| Homo sapiens Xp BAC RP11-797I1 (Roswell Park Can...	40	9.2
59	gb\|AC096759.3\| Homo sapiens BAC clone RP11-567N4 from 4, complet...	40	9.2
60	gb\|AC010602.7\| Homo sapiens chromosome 5 clone CTB-122H10, compl...	40	9.2
61	gb\|AC073991.2\| Homo sapiens BAC clone RP11-512I20 from 4, comple...	40	9.2
62	gb\|AC005087.2\|AC005087 Homo sapiens BAC clone CTA-306D19 from 1,...	40	9.2
63	gb\|AC092611.3\| Homo sapiens BAC clone RP11-164P12 from 4, comple...	40	9.2
64	gb\|AC117479.4\| Homo sapiens 3 BAC RP11-490P18 (Roswell Park Canc...	40	9.2
65	emb\|AL929096.5\| Zebrafish DNA sequence from clone DKEY-216E9 in ...	40	9.2
66	dbj\|AB113356.1\| Sus scrofa 433 kb genomic segment, located betwe...	40	9.2
67	gb\|AC024810.1\| Caenorhabditis elegans cosmid Y54E10A, complete s...	40	9.2
68	emb\|BX004976.7\| Zebrafish DNA sequence from clone CH211-276C7, c...	40	9.2
69	gb\|AY664416.1\| Zea mays cultivar Mo17 locus bz, complete sequence	40	9.2
70	dbj\|AP001982.4\| Homo sapiens genomic DNA, chromosome 11q, clone:...	40	9.2
71	gb\|AF454398.1\| Aplysia californica beta-thymosin mRNA, complete cds	40	9.2
72	gb\|AC123878.4\| Mus musculus BAC clone RP23-318I20 from 3, comple...	40	9.2
73	emb\|AL929239.6\| Zebrafish DNA sequence from clone CH211-112F11, ...	40	9.2
74	emb\|AL928810.7\| Mouse DNA sequence from clone RP23-71I16 on chro...	40	9.2

>dbj|AP001918.1| Plasmid F genomic DNA, complete sequence
          Length = 99159

 Score = 1233 bits (622), Expect = 0.0
 Identities = 657/672 (97%), Gaps = 1/672 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    actctaattgaaactgatgacaggnaccattgttgttggtagacgagggacaggtaaaag 60
            |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 6294 actctaattgaaactgatgacagg-accattgttgttggtagacgagggacaggtaaaag 6236

                                                                        
Query: 61   tgctttatttattcagctaaatgagcattggaagaaagacnnnnnnntattaatcctgag 120
            ||||||||||||||||||||||||||||||||||||||||       |||||||||||||
Sbjct: 6235 tgctttatttattcagctaaatgagcattggaagaaagacaaaaaaatattaatcctgag 6176

                                                                        
Query: 121  tttctcaccagacgattctcaaattattggtttcagatcaatgttgaaaccatttacagg 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6175 tttctcaccagacgattctcaaattattggtttcagatcaatgttgaaaccatttacagg 6116

                                                                        
Query: 181  atcatttaatttagcaagggcagcaacaagactattatggcgatacgctatgctaatgga 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6115 atcatttaatttagcaagggcagcaacaagactattatggcgatacgctatgctaatgga 6056

                                                                        
Query: 241  gatagcatcatatatatcatctcattacaaattgtcatctcaaatatcatcagaaacatt 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6055 gatagcatcatatatatcatctcattacaaattgtcatctcaaatatcatcagaaacatt 5996

                                                                        
Query: 301  gttgaatgaacatttgaaaaaatggaattctgcacaaggtgacattttaagaaagtgtag 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5995 gttgaatgaacatttgaaaaaatggaattctgcacaaggtgacattttaagaaagtgtag 5936

                                                                        
Query: 361  gcttgtcgcaaaggagtatttagatgaaaataacccagaagaatcaattggtgatcttca 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5935 gcttgtcgcaaaggagtatttagatgaaaataacccagaagaatcaattggtgatcttca 5876

                                                                        
Query: 421  attcaatttgaatatctcagaaatagaaaataatatagtatcacttcttgaacgctcaga 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5875 attcaatttgaatatctcagaaatagaaaataatatagtatcacttcttgaacgctcaga 5816

                                                                        
Query: 481  caggaaagttgtcatattaatggataagctagatgaggcgtatgaaccggataatatagg 540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5815 caggaaagttgtcatattaatggataagctagatgaggcgtatgaaccggataatatagg 5756

                                                                        
Query: 541  aattggaatcattgcaggtctagcatatgcatctattgaattaaatcaaaaagcaaaatg 600
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5755 aattggaatcattgcaggtctagcatatgcatctattgaattaaatcaaaaagcaaaatg 5696

                                                                        
Query: 601  cattcgtccaataannnnnnnaagggataatatatttaggtcgctatcaaaggaagatcc 660
            ||||||||||||||       |||||||||||||||||||||||||||||||||||||||
Sbjct: 5695 cattcgtccaataatttttttaagggataatatatttaggtcgctatcaaaggaagatcc 5636

                        
Query: 661  tgattactcgag 672
            ||||||||||||
Sbjct: 5635 tgattactcgag 5624

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>gb|AF457204.1|AF457204 Escherichia coli Cr(VI) reductase gene, complete cds
          Length = 2097

 Score = 1233 bits (622), Expect = 0.0
 Identities = 657/672 (97%), Gaps = 1/672 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   actctaattgaaactgatgacaggnaccattgttgttggtagacgagggacaggtaaaag 60
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 106 actctaattgaaactgatgacagg-accattgttgttggtagacgagggacaggtaaaag 164

                                                                       
Query: 61  tgctttatttattcagctaaatgagcattggaagaaagacnnnnnnntattaatcctgag 120
           ||||||||||||||||||||||||||||||||||||||||       |||||||||||||
Sbjct: 165 tgctttatttattcagctaaatgagcattggaagaaagacaaaaaaatattaatcctgag 224

                                                                       
Query: 121 tttctcaccagacgattctcaaattattggtttcagatcaatgttgaaaccatttacagg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 tttctcaccagacgattctcaaattattggtttcagatcaatgttgaaaccatttacagg 284

                                                                       
Query: 181 atcatttaatttagcaagggcagcaacaagactattatggcgatacgctatgctaatgga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 atcatttaatttagcaagggcagcaacaagactattatggcgatacgctatgctaatgga 344

                                                                       
Query: 241 gatagcatcatatatatcatctcattacaaattgtcatctcaaatatcatcagaaacatt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 gatagcatcatatatatcatctcattacaaattgtcatctcaaatatcatcagaaacatt 404

                                                                       
Query: 301 gttgaatgaacatttgaaaaaatggaattctgcacaaggtgacattttaagaaagtgtag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 gttgaatgaacatttgaaaaaatggaattctgcacaaggtgacattttaagaaagtgtag 464

                                                                       
Query: 361 gcttgtcgcaaaggagtatttagatgaaaataacccagaagaatcaattggtgatcttca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 gcttgtcgcaaaggagtatttagatgaaaataacccagaagaatcaattggtgatcttca 524

                                                                       
Query: 421 attcaatttgaatatctcagaaatagaaaataatatagtatcacttcttgaacgctcaga 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 attcaatttgaatatctcagaaatagaaaataatatagtatcacttcttgaacgctcaga 584

                                                                       
Query: 481 caggaaagttgtcatattaatggataagctagatgaggcgtatgaaccggataatatagg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 caggaaagttgtcatattaatggataagctagatgaggcgtatgaaccggataatatagg 644

                                                                       
Query: 541 aattggaatcattgcaggtctagcatatgcatctattgaattaaatcaaaaagcaaaatg 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 aattggaatcattgcaggtctagcatatgcatctattgaattaaatcaaaaagcaaaatg 704

                                                                       
Query: 601 cattcgtccaataannnnnnnaagggataatatatttaggtcgctatcaaaggaagatcc 660
           ||||||||||||||       |||||||||||||||||||||||||||||||||||||||
Sbjct: 705 cattcgtccaataatttttttaagggataatatatttaggtcgctatcaaaggaagatcc 764

                       
Query: 661 tgattactcgag 672
           ||||||||||||
Sbjct: 765 tgattactcgag 776

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>gb|AC103582.17| Homo sapiens chromosome 22 clone ll22nc01-74c1 map 22q11, complete
             sequence
          Length = 48797

 Score = 1233 bits (622), Expect = 0.0
 Identities = 657/672 (97%), Gaps = 1/672 (0%)
 Strand = Plus / Plus

                                                                         
Query: 1     actctaattgaaactgatgacaggnaccattgttgttggtagacgagggacaggtaaaag 60
             |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 24911 actctaattgaaactgatgacagg-accattgttgttggtagacgagggacaggtaaaag 24969

                                                                         
Query: 61    tgctttatttattcagctaaatgagcattggaagaaagacnnnnnnntattaatcctgag 120
             ||||||||||||||||||||||||||||||||||||||||       |||||||||||||
Sbjct: 24970 tgctttatttattcagctaaatgagcattggaagaaagacaaaaaaatattaatcctgag 25029

                                                                         
Query: 121   tttctcaccagacgattctcaaattattggtttcagatcaatgttgaaaccatttacagg 180
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25030 tttctcaccagacgattctcaaattattggtttcagatcaatgttgaaaccatttacagg 25089

                                                                         
Query: 181   atcatttaatttagcaagggcagcaacaagactattatggcgatacgctatgctaatgga 240
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25090 atcatttaatttagcaagggcagcaacaagactattatggcgatacgctatgctaatgga 25149

                                                                         
Query: 241   gatagcatcatatatatcatctcattacaaattgtcatctcaaatatcatcagaaacatt 300
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25150 gatagcatcatatatatcatctcattacaaattgtcatctcaaatatcatcagaaacatt 25209

                                                                         
Query: 301   gttgaatgaacatttgaaaaaatggaattctgcacaaggtgacattttaagaaagtgtag 360
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25210 gttgaatgaacatttgaaaaaatggaattctgcacaaggtgacattttaagaaagtgtag 25269

                                                                         
Query: 361   gcttgtcgcaaaggagtatttagatgaaaataacccagaagaatcaattggtgatcttca 420
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25270 gcttgtcgcaaaggagtatttagatgaaaataacccagaagaatcaattggtgatcttca 25329

                                                                         
Query: 421   attcaatttgaatatctcagaaatagaaaataatatagtatcacttcttgaacgctcaga 480
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25330 attcaatttgaatatctcagaaatagaaaataatatagtatcacttcttgaacgctcaga 25389

                                                                         
Query: 481   caggaaagttgtcatattaatggataagctagatgaggcgtatgaaccggataatatagg 540
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25390 caggaaagttgtcatattaatggataagctagatgaggcgtatgaaccggataatatagg 25449

                                                                         
Query: 541   aattggaatcattgcaggtctagcatatgcatctattgaattaaatcaaaaagcaaaatg 600
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25450 aattggaatcattgcaggtctagcatatgcatctattgaattaaatcaaaaagcaaaatg 25509

                                                                         
Query: 601   cattcgtccaataannnnnnnaagggataatatatttaggtcgctatcaaaggaagatcc 660
             ||||||||||||||       |||||||||||||||||||||||||||||||||||||||
Sbjct: 25510 cattcgtccaataatttttttaagggataatatatttaggtcgctatcaaaggaagatcc 25569

                         
Query: 661   tgattactcgag 672
             ||||||||||||
Sbjct: 25570 tgattactcgag 25581

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>emb|X60200.1|ECTN1000 E. coli transposon Tn1000 (gamma delta) tnpR and tnpA genes for
            resolvase and transposase
          Length = 5981

 Score = 1233 bits (622), Expect = 0.0
 Identities = 657/672 (97%), Gaps = 1/672 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    actctaattgaaactgatgacaggnaccattgttgttggtagacgagggacaggtaaaag 60
            |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 2104 actctaattgaaactgatgacagg-accattgttgttggtagacgagggacaggtaaaag 2046

                                                                        
Query: 61   tgctttatttattcagctaaatgagcattggaagaaagacnnnnnnntattaatcctgag 120
            ||||||||||||||||||||||||||||||||||||||||       |||||||||||||
Sbjct: 2045 tgctttatttattcagctaaatgagcattggaagaaagacaaaaaaatattaatcctgag 1986

                                                                        
Query: 121  tttctcaccagacgattctcaaattattggtttcagatcaatgttgaaaccatttacagg 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1985 tttctcaccagacgattctcaaattattggtttcagatcaatgttgaaaccatttacagg 1926

                                                                        
Query: 181  atcatttaatttagcaagggcagcaacaagactattatggcgatacgctatgctaatgga 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1925 atcatttaatttagcaagggcagcaacaagactattatggcgatacgctatgctaatgga 1866

                                                                        
Query: 241  gatagcatcatatatatcatctcattacaaattgtcatctcaaatatcatcagaaacatt 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1865 gatagcatcatatatatcatctcattacaaattgtcatctcaaatatcatcagaaacatt 1806

                                                                        
Query: 301  gttgaatgaacatttgaaaaaatggaattctgcacaaggtgacattttaagaaagtgtag 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1805 gttgaatgaacatttgaaaaaatggaattctgcacaaggtgacattttaagaaagtgtag 1746

                                                                        
Query: 361  gcttgtcgcaaaggagtatttagatgaaaataacccagaagaatcaattggtgatcttca 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1745 gcttgtcgcaaaggagtatttagatgaaaataacccagaagaatcaattggtgatcttca 1686

                                                                        
Query: 421  attcaatttgaatatctcagaaatagaaaataatatagtatcacttcttgaacgctcaga 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1685 attcaatttgaatatctcagaaatagaaaataatatagtatcacttcttgaacgctcaga 1626

                                                                        
Query: 481  caggaaagttgtcatattaatggataagctagatgaggcgtatgaaccggataatatagg 540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1625 caggaaagttgtcatattaatggataagctagatgaggcgtatgaaccggataatatagg 1566

                                                                        
Query: 541  aattggaatcattgcaggtctagcatatgcatctattgaattaaatcaaaaagcaaaatg 600
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1565 aattggaatcattgcaggtctagcatatgcatctattgaattaaatcaaaaagcaaaatg 1506

                                                                        
Query: 601  cattcgtccaataannnnnnnaagggataatatatttaggtcgctatcaaaggaagatcc 660
            ||||||||||||||       |||||||||||||||||||||||||||||||||||||||
Sbjct: 1505 cattcgtccaataatttttttaagggataatatatttaggtcgctatcaaaggaagatcc 1446

                        
Query: 661  tgattactcgag 672
            ||||||||||||
Sbjct: 1445 tgattactcgag 1434

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>dbj|D16449.1|ECOTNPA Escherichia coli transposon gamma delta tnpA, tnpR and tnpX genes for
            transposase, resolvase and ORF, complete cds
          Length = 6001

 Score = 1233 bits (622), Expect = 0.0
 Identities = 657/672 (97%), Gaps = 1/672 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    actctaattgaaactgatgacaggnaccattgttgttggtagacgagggacaggtaaaag 60
            |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 3888 actctaattgaaactgatgacagg-accattgttgttggtagacgagggacaggtaaaag 3946

                                                                        
Query: 61   tgctttatttattcagctaaatgagcattggaagaaagacnnnnnnntattaatcctgag 120
            ||||||||||||||||||||||||||||||||||||||||       |||||||||||||
Sbjct: 3947 tgctttatttattcagctaaatgagcattggaagaaagacaaaaaaatattaatcctgag 4006

                                                                        
Query: 121  tttctcaccagacgattctcaaattattggtttcagatcaatgttgaaaccatttacagg 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4007 tttctcaccagacgattctcaaattattggtttcagatcaatgttgaaaccatttacagg 4066

                                                                        
Query: 181  atcatttaatttagcaagggcagcaacaagactattatggcgatacgctatgctaatgga 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4067 atcatttaatttagcaagggcagcaacaagactattatggcgatacgctatgctaatgga 4126

                                                                        
Query: 241  gatagcatcatatatatcatctcattacaaattgtcatctcaaatatcatcagaaacatt 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4127 gatagcatcatatatatcatctcattacaaattgtcatctcaaatatcatcagaaacatt 4186

                                                                        
Query: 301  gttgaatgaacatttgaaaaaatggaattctgcacaaggtgacattttaagaaagtgtag 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4187 gttgaatgaacatttgaaaaaatggaattctgcacaaggtgacattttaagaaagtgtag 4246

                                                                        
Query: 361  gcttgtcgcaaaggagtatttagatgaaaataacccagaagaatcaattggtgatcttca 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4247 gcttgtcgcaaaggagtatttagatgaaaataacccagaagaatcaattggtgatcttca 4306

                                                                        
Query: 421  attcaatttgaatatctcagaaatagaaaataatatagtatcacttcttgaacgctcaga 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4307 attcaatttgaatatctcagaaatagaaaataatatagtatcacttcttgaacgctcaga 4366

                                                                        
Query: 481  caggaaagttgtcatattaatggataagctagatgaggcgtatgaaccggataatatagg 540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4367 caggaaagttgtcatattaatggataagctagatgaggcgtatgaaccggataatatagg 4426

                                                                        
Query: 541  aattggaatcattgcaggtctagcatatgcatctattgaattaaatcaaaaagcaaaatg 600
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4427 aattggaatcattgcaggtctagcatatgcatctattgaattaaatcaaaaagcaaaatg 4486

                                                                        
Query: 601  cattcgtccaataannnnnnnaagggataatatatttaggtcgctatcaaaggaagatcc 660
            ||||||||||||||       |||||||||||||||||||||||||||||||||||||||
Sbjct: 4487 cattcgtccaataatttttttaagggataatatatttaggtcgctatcaaaggaagatcc 4546

                        
Query: 661  tgattactcgag 672
            ||||||||||||
Sbjct: 4547 tgattactcgag 4558

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>emb|AL078473.2|HS2A11 Homo sapiens chromosome 21 Cosmid LLNCO21A112, complete sequence
          Length = 46007

 Score = 1233 bits (622), Expect = 0.0
 Identities = 657/672 (97%), Gaps = 1/672 (0%)
 Strand = Plus / Plus

                                                                         
Query: 1     actctaattgaaactgatgacaggnaccattgttgttggtagacgagggacaggtaaaag 60
             |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 20352 actctaattgaaactgatgacagg-accattgttgttggtagacgagggacaggtaaaag 20410

                                                                         
Query: 61    tgctttatttattcagctaaatgagcattggaagaaagacnnnnnnntattaatcctgag 120
             ||||||||||||||||||||||||||||||||||||||||       |||||||||||||
Sbjct: 20411 tgctttatttattcagctaaatgagcattggaagaaagacaaaaaaatattaatcctgag 20470

                                                                         
Query: 121   tttctcaccagacgattctcaaattattggtttcagatcaatgttgaaaccatttacagg 180
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20471 tttctcaccagacgattctcaaattattggtttcagatcaatgttgaaaccatttacagg 20530

                                                                         
Query: 181   atcatttaatttagcaagggcagcaacaagactattatggcgatacgctatgctaatgga 240
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20531 atcatttaatttagcaagggcagcaacaagactattatggcgatacgctatgctaatgga 20590

                                                                         
Query: 241   gatagcatcatatatatcatctcattacaaattgtcatctcaaatatcatcagaaacatt 300
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20591 gatagcatcatatatatcatctcattacaaattgtcatctcaaatatcatcagaaacatt 20650

                                                                         
Query: 301   gttgaatgaacatttgaaaaaatggaattctgcacaaggtgacattttaagaaagtgtag 360
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20651 gttgaatgaacatttgaaaaaatggaattctgcacaaggtgacattttaagaaagtgtag 20710

                                                                         
Query: 361   gcttgtcgcaaaggagtatttagatgaaaataacccagaagaatcaattggtgatcttca 420
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20711 gcttgtcgcaaaggagtatttagatgaaaataacccagaagaatcaattggtgatcttca 20770

                                                                         
Query: 421   attcaatttgaatatctcagaaatagaaaataatatagtatcacttcttgaacgctcaga 480
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20771 attcaatttgaatatctcagaaatagaaaataatatagtatcacttcttgaacgctcaga 20830

                                                                         
Query: 481   caggaaagttgtcatattaatggataagctagatgaggcgtatgaaccggataatatagg 540
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20831 caggaaagttgtcatattaatggataagctagatgaggcgtatgaaccggataatatagg 20890

                                                                         
Query: 541   aattggaatcattgcaggtctagcatatgcatctattgaattaaatcaaaaagcaaaatg 600
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20891 aattggaatcattgcaggtctagcatatgcatctattgaattaaatcaaaaagcaaaatg 20950

                                                                         
Query: 601   cattcgtccaataannnnnnnaagggataatatatttaggtcgctatcaaaggaagatcc 660
             ||||||||||||||       |||||||||||||||||||||||||||||||||||||||
Sbjct: 20951 cattcgtccaataatttttttaagggataatatatttaggtcgctatcaaaggaagatcc 21010

                         
Query: 661   tgattactcgag 672
             ||||||||||||
Sbjct: 21011 tgattactcgag 21022

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>emb|X96404.1|NITNREPSQ N.indica repetitive sequence, homologous to Tn1000
          Length = 851

 Score =  648 bits (327), Expect = 0.0
 Identities = 341/348 (97%)
 Strand = Plus / Minus

                                                                       
Query: 325 gaattctgcacaaggtgacattttaagaaagtgtaggcttgtcgcaaaggagtatttaga 384
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 851 gaattctgcacaaggtgacattttaagaaagtgtaggcttgtcgcaaaggagtatttaga 792

                                                                       
Query: 385 tgaaaataacccagaagaatcaattggtgatcttcaattcaatttgaatatctcagaaat 444
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 tgaaaataacccagaagaatcaattggtgatcttcaattcaatttgaatatctcagaaat 732

                                                                       
Query: 445 agaaaataatatagtatcacttcttgaacgctcagacaggaaagttgtcatattaatgga 504
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 agaaaataatatagtatcacttcttgaacgctcagacaggaaagttgtcatattaatgga 672

                                                                       
Query: 505 taagctagatgaggcgtatgaaccggataatataggaattggaatcattgcaggtctagc 564
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 taagctagatgaggcgtatgaaccggataatataggaattggaatcattgcaggtctagc 612

                                                                       
Query: 565 atatgcatctattgaattaaatcaaaaagcaaaatgcattcgtccaataannnnnnnaag 624
           ||||||||||||||||||||||||||||||||||||||||||||||||||       |||
Sbjct: 611 atatgcatctattgaattaaatcaaaaagcaaaatgcattcgtccaataatttttttaag 552

                                                           
Query: 625 ggataatatatttaggtcgctatcaaaggaagatcctgattactcgag 672
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 ggataatatatttaggtcgctatcaaaggaagatcctgattactcgag 504

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>gb|M93663.1|MUSRNADALK Mouse RNA-dependent EIF-2 alpha kinase, complete cds
          Length = 847

 Score =  636 bits (321), Expect = e-179
 Identities = 335/342 (97%)
 Strand = Plus / Plus

                                                                       
Query: 331 tgcacaaggtgacattttaagaaagtgtaggcttgtcgcaaaggagtatttagatgaaaa 390
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tgcacaaggtgacattttaagaaagtgtaggcttgtcgcaaaggagtatttagatgaaaa 60

                                                                       
Query: 391 taacccagaagaatcaattggtgatcttcaattcaatttgaatatctcagaaatagaaaa 450
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  taacccagaagaatcaattggtgatcttcaattcaatttgaatatctcagaaatagaaaa 120

                                                                       
Query: 451 taatatagtatcacttcttgaacgctcagacaggaaagttgtcatattaatggataagct 510
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 taatatagtatcacttcttgaacgctcagacaggaaagttgtcatattaatggataagct 180

                                                                       
Query: 511 agatgaggcgtatgaaccggataatataggaattggaatcattgcaggtctagcatatgc 570
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agatgaggcgtatgaaccggataatataggaattggaatcattgcaggtctagcatatgc 240

                                                                       
Query: 571 atctattgaattaaatcaaaaagcaaaatgcattcgtccaataannnnnnnaagggataa 630
           ||||||||||||||||||||||||||||||||||||||||||||       |||||||||
Sbjct: 241 atctattgaattaaatcaaaaagcaaaatgcattcgtccaataatttttttaagggataa 300

                                                     
Query: 631 tatatttaggtcgctatcaaaggaagatcctgattactcgag 672
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tatatttaggtcgctatcaaaggaagatcctgattactcgag 342

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>gb|L43071.1|ETAHLYA Edwardsiella tarda hlyA gene, ORFs, complete cds
          Length = 2436

 Score =  597 bits (301), Expect = e-167
 Identities = 322/330 (97%), Gaps = 1/330 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   actctaattgaaactgatgacaggnaccattgttgttggtagacgagggacaggtaaaag 60
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 331 actctaattgaaactgatgacagg-accattgttgttggtagacgagggacaggtaaaag 389

                                                                       
Query: 61  tgctttatttattcagctaaatgagcattggaagaaagacnnnnnnntattaatcctgag 120
           ||||||||||||||||||||||||||||||||||||||||       |||||||||||||
Sbjct: 390 tgctttatttattcagctaaatgagcattggaagaaagacaaaaaaatattaatcctgag 449

                                                                       
Query: 121 tttctcaccagacgattctcaaattattggtttcagatcaatgttgaaaccatttacagg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 tttctcaccagacgattctcaaattattggtttcagatcaatgttgaaaccatttacagg 509

                                                                       
Query: 181 atcatttaatttagcaagggcagcaacaagactattatggcgatacgctatgctaatgga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 atcatttaatttagcaagggcagcaacaagactattatggcgatacgctatgctaatgga 569

                                                                       
Query: 241 gatagcatcatatatatcatctcattacaaattgtcatctcaaatatcatcagaaacatt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 gatagcatcatatatatcatctcattacaaattgtcatctcaaatatcatcagaaacatt 629

                                         
Query: 301 gttgaatgaacatttgaaaaaatggaattc 330
           ||||||||||||||||||||||||||||||
Sbjct: 630 gttgaatgaacatttgaaaaaatggaattc 659

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>gb|U62442.1|AAU62442 Alternaria alternata allergen r Alt a 2 (r Alt a 2) mRNA, complete
           cds
          Length = 573

 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 48/48 (100%)
 Strand = Plus / Plus

                                                           
Query: 625 ggataatatatttaggtcgctatcaaaggaagatcctgattactcgag 672
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27  ggataatatatttaggtcgctatcaaaggaagatcctgattactcgag 74

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>gb|AC093575.2| Homo sapiens chromosome 1 clone RP11-40C18, complete sequence
          Length = 159238

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 306   atgaacatttgaaaaaatggaat 328
             |||||||||||||||||||||||
Sbjct: 16429 atgaacatttgaaaaaatggaat 16451

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>emb|BX640658.1|HSM806714 Homo sapiens mRNA; cDNA DKFZp313N0119 (from clone DKFZp313N0119)
          Length = 4619

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 306  atgaacatttgaaaaaatggaat 328
            |||||||||||||||||||||||
Sbjct: 4370 atgaacatttgaaaaaatggaat 4392

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>gb|AE014304.1| Homo sapiens chromosome 13q34 schizophrenia region contig 1 section 1 of
              11 of the complete sequence
          Length = 250029

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 578    gaattaaatcaaaaagcaaaatgcat 603
              |||||| |||||||||||||||||||
Sbjct: 120255 gaattagatcaaaaagcaaaatgcat 120280

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>emb|AL161771.17| Human DNA sequence from clone RP11-11L8 on chromosome 13 Contains the
              SLC10A2 gene for solute carrier family 10 (sodium/bile acid
              cotransporter family, member 2, complete sequence
          Length = 171132

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 578    gaattaaatcaaaaagcaaaatgcat 603
              |||||| |||||||||||||||||||
Sbjct: 101429 gaattagatcaaaaagcaaaatgcat 101454

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>ref|XM_475518.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3966

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 287  tcatcagaaacattgttgaat 307
            |||||||||||||||||||||
Sbjct: 1052 tcatcagaaacattgttgaat 1072

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>gb|AC093088.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1001_G01,
              complete sequence
          Length = 122768

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 287    tcatcagaaacattgttgaat 307
              |||||||||||||||||||||
Sbjct: 121018 tcatcagaaacattgttgaat 121038

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>gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, complete sequence
          Length = 4837408

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 575     attgaattaaatcaaaaagca 595
               |||||||||||||||||||||
Sbjct: 2678300 attgaattaaatcaaaaagca 2678320

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>gb|AC138716.2| Mus musculus BAC clone RP23-241B5 from chromosome 14, complete sequence
          Length = 167083

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 440   gaaatagaaaataatatagtatcacttct 468
             |||| ||||||||| ||||||||||||||
Sbjct: 76896 gaaaaagaaaataaaatagtatcacttct 76868

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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 283     aatatcatcagaaacattgtt 303
               |||||||||||||||||||||
Sbjct: 5945309 aatatcatcagaaacattgtt 5945289

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>emb|AL161899.21| Human DNA sequence from clone RP11-418I10 on chromosome 13, complete
             sequence
          Length = 159981

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 381   tagatgaaaataacccagaag 401
             |||||||||||||||||||||
Sbjct: 73592 tagatgaaaataacccagaag 73572

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>gb|AE014181.1| Mus musculus piebald deletion region section 9 of 11 of the complete
             sequence
          Length = 400029

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 440   gaaatagaaaataatatagtatcacttct 468
             |||| ||||||||| ||||||||||||||
Sbjct: 16351 gaaaaagaaaataaaatagtatcacttct 16379

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>gb|AC127456.2| Homo sapiens chromosome 16 clone CTD-3175N14, complete sequence
          Length = 29346

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 171   catttacaggatcatttaatt 191
             |||||||||||||||||||||
Sbjct: 10023 catttacaggatcatttaatt 10043

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>gb|AC023713.4| Drosophila melanogaster X BAC RP98-24A2 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 181178

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 559    tctagcatatgcatctattgaatta 583
              |||||||||||||| ||||||||||
Sbjct: 133999 tctagcatatgcatatattgaatta 133975

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>gb|AC010057.7| Drosophila melanogaster 3L BAC RP98-26C18 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 192588

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 419    caattcaatttgaatatctca 439
              |||||||||||||||||||||
Sbjct: 126656 caattcaatttgaatatctca 126636

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>gb|AC106779.3| Homo sapiens chromosome 16 clone RP11-343H19, complete sequence
          Length = 158297

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 171    catttacaggatcatttaatt 191
              |||||||||||||||||||||
Sbjct: 147952 catttacaggatcatttaatt 147972

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>gb|AC091219.2| Drosophila melanogaster 3L BAC RP98-4C3 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 168047

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 419    caattcaatttgaatatctca 439
              |||||||||||||||||||||
Sbjct: 166006 caattcaatttgaatatctca 165986

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>gb|AC134241.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0085F02, complete sequence
          Length = 128535

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 283   aatatcatcagaaacattgtt 303
             |||||||||||||||||||||
Sbjct: 94931 aatatcatcagaaacattgtt 94911

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>gb|AC135158.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1193C08,
            complete sequence
          Length = 111961

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 283  aatatcatcagaaacattgtt 303
            |||||||||||||||||||||
Sbjct: 3844 aatatcatcagaaacattgtt 3824

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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 287     tcatcagaaacattgttgaat 307
               |||||||||||||||||||||
Sbjct: 1165407 tcatcagaaacattgttgaat 1165427

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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 283     aatatcatcagaaacattgtt 303
               |||||||||||||||||||||
Sbjct: 5944522 aatatcatcagaaacattgtt 5944502

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>gb|AE003469.3| Drosophila melanogaster chromosome 3L, section 3 of 83 of the complete
              sequence
          Length = 286515

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 419    caattcaatttgaatatctca 439
              |||||||||||||||||||||
Sbjct: 152685 caattcaatttgaatatctca 152665

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>gb|AE003442.3| Drosophila melanogaster chromosome X, section 26 of 74 of the complete
              sequence
          Length = 316794

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 559    tctagcatatgcatctattgaatta 583
              |||||||||||||| ||||||||||
Sbjct: 186956 tctagcatatgcatatattgaatta 186980

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>emb|X17550.1|DMSING3 D. melanogaster singed gene, exons 3, 4, 5 & 6
          Length = 3514

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 559  tctagcatatgcatctattgaatta 583
            |||||||||||||| ||||||||||
Sbjct: 2507 tctagcatatgcatatattgaatta 2531

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>emb|AM233362.1| Francisella tularensis subsp. holarctica strain LVS complete genome
          Length = 1895994

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 168     aaccatttacaggatcattta 188
               |||||||||||||||||||||
Sbjct: 1450223 aaccatttacaggatcattta 1450243

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>emb|AJ749949.1| Francisella tularensis subsp. tularensis SCHU S4 complete genome
          Length = 1892819

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 168    aaccatttacaggatcattta 188
              |||||||||||||||||||||
Sbjct: 735479 aaccatttacaggatcattta 735459

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>gb|AC093089.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1729_E02,
             complete sequence
          Length = 90509

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 287   tcatcagaaacattgttgaat 307
             |||||||||||||||||||||
Sbjct: 15693 tcatcagaaacattgttgaat 15713

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>gb|AC163738.5| Pan troglodytes BAC clone CH251-479G24 from chromosome y, complete
             sequence
          Length = 196222

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 67    atttattcagctaaatgagc 86
             ||||||||||||||||||||
Sbjct: 95248 atttattcagctaaatgagc 95229

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>gb|AC094830.5| Rattus norvegicus 8 BAC CH230-3H18 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 237199

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 69     ttattcagctaaatgagcat 88
              ||||||||||||||||||||
Sbjct: 112476 ttattcagctaaatgagcat 112495

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>gb|AC161056.5| Mus musculus BAC clone RP23-241J7 from chromosome 3, complete sequence
          Length = 226878

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 438   cagaaatagaaaataatatagtat 461
             |||||||||||||||||| |||||
Sbjct: 27448 cagaaatagaaaataataaagtat 27471

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>emb|Z82062.1|CEW02A11 Caenorhabditis elegans Cosmid W02A11, complete sequence
          Length = 32203

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 428   ttgaatatctcagaaataga 447
             ||||||||||||||||||||
Sbjct: 28404 ttgaatatctcagaaataga 28385

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>gb|AC124458.5| Mus musculus BAC clone RP24-136E11 from chromosome 12, complete sequence
          Length = 168181

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 175    tacaggatcatttaatttag 194
              ||||||||||||||||||||
Sbjct: 100568 tacaggatcatttaatttag 100549

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>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome
          Length = 151104

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 412   tgatcttcaattcaatttga 431
             ||||||||||||||||||||
Sbjct: 25997 tgatcttcaattcaatttga 25978

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>gb|AC125453.6| Homo sapiens chromosome 8, clone RP11-1049H7, complete sequence
          Length = 186608

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 305    aatgaacatttgaaaaaatg 324
              ||||||||||||||||||||
Sbjct: 177943 aatgaacatttgaaaaaatg 177924

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>emb|AL008866.1|CEB0019 Caenorhabditis elegans Cosmid B0019, complete sequence
          Length = 39790

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 428   ttgaatatctcagaaataga 447
             ||||||||||||||||||||
Sbjct: 18325 ttgaatatctcagaaataga 18306

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>ref|XM_642749.1| Entamoeba histolytica HM-1:IMSS WD repeat protein (1004.t00001)
           partial mRNA
          Length = 663

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 57  aaagtgctttatttattcagctaa 80
           ||||||||||||||||||| ||||
Sbjct: 540 aaagtgctttatttattcaactaa 563

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>ref|XM_536487.2| PREDICTED: Canis familiaris similar to 3-oxoacid CoA transferase 1
           (LOC479347), mRNA
          Length = 2066

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 319 aaaatggaattctgcacaaggtga 342
           |||||||||||||||| |||||||
Sbjct: 240 aaaatggaattctgcagaaggtga 263

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>gb|AE004096.1| Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, section 4
            of 251 of the complete chromosome
          Length = 10846

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 470  gaacgctcagacaggaaagt 489
            ||||||||||||||||||||
Sbjct: 1041 gaacgctcagacaggaaagt 1022

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>emb|AL603902.4| Human DNA sequence from clone RP11-167I10 on chromosome 6 Contains the
             3' end of the TRDN gene for triadin (TDN, TRIADIN),
             complete sequence
          Length = 158024

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 248   tcatatatatcatctcatta 267
             ||||||||||||||||||||
Sbjct: 31989 tcatatatatcatctcatta 31970

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>emb|AL445923.10| Human DNA sequence from clone RP11-117N4 on chromosome 13 Contains a
             ribosomal protein S10 (RPS10) pseudogene, complete
             sequence
          Length = 154726

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 304   gaatgaacatttgaaaaaat 323
             ||||||||||||||||||||
Sbjct: 96893 gaatgaacatttgaaaaaat 96874

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>emb|AL162574.14| Human DNA sequence from clone RP11-282A11 on chromosome 13 Contains a
             novel gene similar to peptidylprolyl isomerase A
             (cyclophilin A) (PPIA) (CYPA CYPH) and a CpG island,
             complete sequence
          Length = 184738

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 304   gaatgaacatttgaaaaaat 323
             ||||||||||||||||||||
Sbjct: 49080 gaatgaacatttgaaaaaat 49099

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>emb|AL139220.13| Human DNA sequence from clone RP5-1198O20 on chromosome 1p32.3-34.2,
              complete sequence
          Length = 133728

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 343    cattttaagaaagtgtaggc 362
              ||||||||||||||||||||
Sbjct: 125514 cattttaagaaagtgtaggc 125495

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>emb|AL139140.11| Human DNA sequence from clone RP5-1071P19 on chromosome 1p34.1-34.3
             Contains part of the CSMD2 gene for CUB and Sushi multiple
             domains 2, complete sequence
          Length = 78229

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 647   tcaaaggaagatcctgatta 666
             ||||||||||||||||||||
Sbjct: 44753 tcaaaggaagatcctgatta 44772

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>gb|AY509253.1| Ostreid herpesvirus 1, complete genome
          Length = 207439

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 297   cattgttgaatgaacatttg 316
             ||||||||||||||||||||
Sbjct: 32337 cattgttgaatgaacatttg 32318

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>emb|CR382401.1| Plasmodium falciparum chromosome 6, complete sequence; segment 4/5
          Length = 337203

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 489   ttgtcatattaatggataag 508
             ||||||||||||||||||||
Sbjct: 43589 ttgtcatattaatggataag 43608

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>emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, complete genome
          Length = 5064019

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 166    gaaaccatttacaggatcat 185
              ||||||||||||||||||||
Sbjct: 329422 gaaaccatttacaggatcat 329441

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>emb|BX295539.1|NCB1D14 Neurospora crassa genomic DNA, BAC contig B1D14
          Length = 138898

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 529  ggataatataggaattggaa 548
            ||||||||||||||||||||
Sbjct: 5047 ggataatataggaattggaa 5028

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>gb|AF448416.1| Zea mays B73 chromosome 9S bz genomic region
          Length = 106186

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 193   agcaagggcagcaacaagac 212
             ||||||||||||||||||||
Sbjct: 92466 agcaagggcagcaacaagac 92447

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>gb|AC073613.16| Homo sapiens Xp BAC RP11-797I1 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 137432

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 305  aatgaacatttgaaaaaatg 324
            ||||||||||||||||||||
Sbjct: 8466 aatgaacatttgaaaaaatg 8447

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>gb|AC096759.3| Homo sapiens BAC clone RP11-567N4 from 4, complete sequence
          Length = 196363

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 227    gctatgctaatggagatagc 246
              ||||||||||||||||||||
Sbjct: 100629 gctatgctaatggagatagc 100610

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>gb|AC010602.7| Homo sapiens chromosome 5 clone CTB-122H10, complete sequence
          Length = 145424

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 135   attctcaaattattggtttcagat 158
             |||||| |||||||||||||||||
Sbjct: 13752 attctctaattattggtttcagat 13729

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>gb|AC073991.2| Homo sapiens BAC clone RP11-512I20 from 4, complete sequence
          Length = 159838

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 338  ggtgacattttaagaaagtg 357
            ||||||||||||||||||||
Sbjct: 4697 ggtgacattttaagaaagtg 4678

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>gb|AC005087.2|AC005087 Homo sapiens BAC clone CTA-306D19 from 1, complete sequence
          Length = 53204

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 343   cattttaagaaagtgtaggc 362
             ||||||||||||||||||||
Sbjct: 33399 cattttaagaaagtgtaggc 33418

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>gb|AC092611.3| Homo sapiens BAC clone RP11-164P12 from 4, complete sequence
          Length = 141194

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 135    attctcaaattattggtttc 154
              ||||||||||||||||||||
Sbjct: 130019 attctcaaattattggtttc 130038

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>gb|AC117479.4| Homo sapiens 3 BAC RP11-490P18 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 145285

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 309   aacatttgaaaaaatggaat 328
             ||||||||||||||||||||
Sbjct: 96823 aacatttgaaaaaatggaat 96804

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>emb|AL929096.5| Zebrafish DNA sequence from clone DKEY-216E9 in linkage group 17,
             complete sequence
          Length = 192592

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 438   cagaaatagaaaataatata 457
             ||||||||||||||||||||
Sbjct: 40245 cagaaatagaaaataatata 40264

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>dbj|AB113356.1| Sus scrofa 433 kb genomic segment, located between the non-classical
             and classical SLA class I gene cluster, clone: BAC 1051H9
          Length = 146382

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 433   tatctcagaaatagaaaataatat 456
             ||||| ||||||||||||||||||
Sbjct: 86897 tatctgagaaatagaaaataatat 86874

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>gb|AC024810.1| Caenorhabditis elegans cosmid Y54E10A, complete sequence
          Length = 101640

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 312   atttgaaaaaatggaattct 331
             ||||||||||||||||||||
Sbjct: 24471 atttgaaaaaatggaattct 24452

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>emb|BX004976.7| Zebrafish DNA sequence from clone CH211-276C7, complete sequence
          Length = 151137

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 63     ctttatttattcagctaaat 82
              ||||||||||||||||||||
Sbjct: 141858 ctttatttattcagctaaat 141839

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>gb|AY664416.1| Zea mays cultivar Mo17 locus bz, complete sequence
          Length = 203581

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 193   agcaagggcagcaacaagac 212
             ||||||||||||||||||||
Sbjct: 81097 agcaagggcagcaacaagac 81078

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>dbj|AP001982.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-344F5, complete
             sequence
          Length = 137996

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 110   ttaatcctgagtttctcacc 129
             ||||||||||||||||||||
Sbjct: 39525 ttaatcctgagtttctcacc 39544

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>gb|AF454398.1| Aplysia californica beta-thymosin mRNA, complete cds
          Length = 869

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 472 acgctcagacaggaaagttg 491
           ||||||||||||||||||||
Sbjct: 731 acgctcagacaggaaagttg 712

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>gb|AC123878.4| Mus musculus BAC clone RP23-318I20 from 3, complete sequence
          Length = 215121

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 438    cagaaatagaaaataatatagtat 461
              |||||||||||||||||| |||||
Sbjct: 179612 cagaaatagaaaataataaagtat 179589

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>emb|AL929239.6| Zebrafish DNA sequence from clone CH211-112F11, complete sequence
          Length = 155623

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 139    tcaaattattggtttcagat 158
              ||||||||||||||||||||
Sbjct: 142793 tcaaattattggtttcagat 142774

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>emb|AL928810.7| Mouse DNA sequence from clone RP23-71I16 on chromosome 2, complete
             sequence
          Length = 87843

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 294   aaacattgttgaatgaacat 313
             ||||||||||||||||||||
Sbjct: 84101 aaacattgttgaatgaacat 84120


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8,459,986
Number of Sequences: 3902068
Number of extensions: 8459986
Number of successful extensions: 171642
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 171141
Number of HSP's gapped (non-prelim): 479
length of query: 674
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 651
effective length of database: 17,143,297,704
effective search space: 11160286805304
effective search space used: 11160286805304
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result