>RNS1_ARATH (P42813) Ribonuclease 1 precursor (EC 3.1.27.1)|
          Length = 230

 Score = 63.2 bits (152), Expect = 1e-10
 Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
 Frame = +2

Query: 128 WPGAYCVQTTGGCCMPKSPIVPAADFYVSGFTVLNATTDAPETSCSSTPFNSDEILGI-S 304
           WPG+YC  T   CC P S   PAADF + G          P    +S PF+S  I  + +
Sbjct: 39  WPGSYC-DTQKKCCYPNSG-KPAADFGIHGLWPNYKDGTYPSNCDASKPFDSSTISDLLT 96

Query: 305 GLRQYWSNIKCPSNNGQKSWKSAWKTSGVCS 397
            +++ W  + CPS +G+  W+  W+  G CS
Sbjct: 97  SMKKSWPTLACPSGSGEAFWEHEWEKHGTCS 127

>RNLE_LYCES (P80022) Extracellular ribonuclease LE precursor (EC 3.1.27.1)|
           (RNase LE)
          Length = 230

 Score = 63.2 bits (152), Expect = 1e-10
 Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
 Frame = +2

Query: 128 WPGAYCVQTTGGCCMPKSPIVPAADFYVSGFTVLNATTDAPETSCSSTPFNSDEILG-IS 304
           WPG+YC  T   CC P +   PAADF + G    N     P     ++P++  +I   IS
Sbjct: 38  WPGSYC-DTKQSCCYPTTG-KPAADFGIHGLWPNNNDGTYPSNCDPNSPYDQSQISDLIS 95

Query: 305 GLRQYWSNIKCPSNNGQKSWKSAWKTSGVCS 397
            ++Q W  + CPS +G   W   W+  G C+
Sbjct: 96  SMQQNWPTLACPSGSGSTFWSHEWEKHGTCA 126

>RNS3_ARATH (P42815) Ribonuclease 3 precursor (EC 3.1.27.1)|
          Length = 222

 Score = 62.4 bits (150), Expect = 3e-10
 Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
 Frame = +2

Query: 122 LMWPGAYCVQTTGGCCMPKSPIVPAADFYVSGFTVLNATTDAPETSCSSTPFNSDEILGI 301
           L WPGAYC  +   CC P++   PAADF + G      T   P+     + F+   +  +
Sbjct: 29  LQWPGAYC-DSRHSCCYPQTG-KPAADFGIHGLWPNYKTGGWPQNCNPDSRFDDLRVSDL 86

Query: 302 -SGLRQYWSNIKCPSNNGQKSWKSAWKTSGVCS 397
            S L++ W  + CPSN+G K W   W+  G C+
Sbjct: 87  MSDLQREWPTLSCPSNDGMKFWTHEWEKHGTCA 119

>RNLX_LYCES (P80196) Intracellular ribonuclease LX precursor (EC 3.1.27.1)|
           (RNase LX)
          Length = 237

 Score = 49.3 bits (116), Expect = 2e-06
 Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 1/91 (1%)
 Frame = +2

Query: 128 WPGAYCVQTTGGCCMPKSPIVPAADFYVSGFTVLNATTDAPETSCSSTPFNSDEILG-IS 304
           WP +YC  T   CC P +   P  DF + G          P+     +  +  E    IS
Sbjct: 37  WPASYC-DTRRSCCYPTTG-KPDEDFSIHGLWPNYKDGKWPQNCDRESSLDESEFSDLIS 94

Query: 305 GLRQYWSNIKCPSNNGQKSWKSAWKTSGVCS 397
            + + W ++ CPS++G K W   W   G CS
Sbjct: 95  TMEKNWPSLACPSSDGLKFWSHEWLKHGTCS 125

>RNS2_ARATH (P42814) Ribonuclease 2 precursor (EC 3.1.27.1)|
          Length = 259

 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 33/104 (31%), Positives = 47/104 (45%), Gaps = 10/104 (9%)
 Frame = +2

Query: 116 IGLMWPGAYCVQTTGGCCMPKSPIVPAADFYVSGFTVLNATTDAPETS----CSSTPFNS 283
           + L WPG YC + T  CC  K+     +D   + FT+     D  + S    C  + F  
Sbjct: 37  LSLQWPGTYC-RGTRHCC-SKNACCRGSD-APTQFTIHGLWPDYNDGSWPSCCYRSDFKE 93

Query: 284 DEILGI-SGLRQYWSNIKCPS----NNGQKS-WKSAWKTSGVCS 397
            EI  +  GL +YW ++ C S    N G+ S W   W+  G CS
Sbjct: 94  KEISTLMDGLEKYWPSLSCGSPSSCNGGKGSFWGHEWEKHGTCS 137

>RNT2_HUMAN (O00584) Ribonuclease T2 precursor (EC 3.1.27.-) (Ribonuclease 6)|
          Length = 256

 Score = 37.0 bits (84), Expect = 0.011
 Identities = 24/91 (26%), Positives = 36/91 (39%), Gaps = 1/91 (1%)
 Frame = +2

Query: 128 WPGAYCVQTTGGCCMPKSPIVPAADFYVSGFTVLNATTDAPETSCSSTPFNSDEILGI-S 304
           WP   C +    C  P        D++    T+     D  E    S PFN +EI  +  
Sbjct: 43  WPETVCEKIQNDCRDPP-------DYW----TIHGLWPDKSEGCNRSWPFNLEEIKDLLP 91

Query: 305 GLRQYWSNIKCPSNNGQKSWKSAWKTSGVCS 397
            +R YW ++     N  + WK  W+  G C+
Sbjct: 92  EMRAYWPDVIHSFPNRSRFWKHEWEKHGTCA 122

>RNS2_ANTHI (Q38716) Ribonuclease S-2 precursor (EC 3.1.27.1) (Stylar|
           glycoprotein 2) (S2-RNase)
          Length = 235

 Score = 35.4 bits (80), Expect = 0.033
 Identities = 28/100 (28%), Positives = 40/100 (40%), Gaps = 8/100 (8%)
 Frame = +2

Query: 122 LMWPGAYCVQTTGGCCMPKSPIVPAADFYVSGFTVLNATTDAPETSCSSTPFNSDEILGI 301
           L WP +YC   T  C   + P         S FT+     D      S+    S ++L I
Sbjct: 40  LQWPNSYCSLKTTHCPRTRLP---------SQFTIHGLWPDNKSWPLSNCRDTSADVLKI 90

Query: 302 S--GLRQ----YWSNIKCPSNN--GQKSWKSAWKTSGVCS 397
           +  GL Q    +W ++        GQK W + WK  G C+
Sbjct: 91  TDKGLIQDLAVHWPDLTRRQRKVPGQKFWVTQWKKHGACA 130

>RNT2_PIG (Q7M329) Ribonuclease T2 (EC 3.1.27.-)|
          Length = 200

 Score = 34.7 bits (78), Expect = 0.056
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
 Frame = +2

Query: 266 STPFNSDEILG-ISGLRQYWSNIKCPS-NNGQKSWKSAWKTSGVCS 397
           S PFN DEI G +  +R YW ++   S N+    W+  W+  G C+
Sbjct: 45  SWPFNPDEIKGLLPDMRLYWPDVLHSSPNHSVHFWRHEWEKHGTCA 90

>RNT2_MOUSE (Q9CQ01) Ribonuclease T2 precursor (EC 3.1.27.-) (Ribonuclease 6)|
          Length = 259

 Score = 33.5 bits (75), Expect = 0.13
 Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
 Frame = +2

Query: 218 FTVLNATTDAPETSCSSTPFNSDEILGI-SGLRQYWSNIKCPSNNGQKSWKSAWKTSGVC 394
           +T+     D  E    S  FN DEI  +   ++ YW ++   S+N  + WK  W   G C
Sbjct: 66  WTIHGLWPDRAEDCNQSWHFNLDEIKDLLRDMKIYWPDVIHRSSNRSQFWKHEWVKHGTC 125

Query: 395 S 397
           +
Sbjct: 126 A 126

>Y4RN_RHISN (P55647) Hypothetical transport protein y4rN|
          Length = 405

 Score = 31.6 bits (70), Expect = 0.48
 Identities = 27/80 (33%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
 Frame = -2

Query: 381 VFQALFQLFWPLLLGHLMLLQYCLRPLIPR-ISSELKGVLLQLVSGASVVAFKTVKPET* 205
           V  AL +   P+L G L         ++P  I S L GVLL  V     V    +     
Sbjct: 38  VLFALARFSSPVLAGWLTFAA-----IVPGLIVSPLAGVLLDCVGPTIAVRIDMIASTAF 92

Query: 204 KSAAGTMGLLGMQHPPVVCT 145
            +A    G LG   PPVVCT
Sbjct: 93  ITAISLAGWLGWSSPPVVCT 112

>DPO3_BACHD (Q9KA72) DNA polymerase III polC-type (EC 2.7.7.7) (PolIII)|
          Length = 1433

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 16/76 (21%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
 Frame = -2

Query: 387 PDVFQALFQLFWPLLLGHLMLLQYCLRPLIPRISSELKG--VLLQLVSGASVVAFKTVKP 214
           PD+ + ++Q +WPL++  L  +   L+ ++ + +    G  +++Q+ +    +A K    
Sbjct: 88  PDLSEQVWQSYWPLIVAKLTNISQPLKEMLEKQTPRFDGKRLVIQVGNETEAIALKRKLT 147

Query: 213 ET*KSAAGTMGLLGMQ 166
           E  + A  + G   +Q
Sbjct: 148 EPLQQAVQSFGFPAVQ 163

>CHIT_CAEEL (Q11174) Probable endochitinase (EC 3.2.1.14)|
          Length = 617

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 18/67 (26%), Positives = 31/67 (46%)
 Frame = +2

Query: 170 MPKSPIVPAADFYVSGFTVLNATTDAPETSCSSTPFNSDEILGISGLRQYWSNIKCPSNN 349
           MPK  I+     Y  G+T+ NA+   P T  S +P    + +  +G+  Y+   +  +N 
Sbjct: 290 MPKEKIIVGMPTYGRGWTLNNASAINPGT--SGSPAKITQYVQEAGVGAYFEFCEMLANG 347

Query: 350 GQKSWKS 370
             + W S
Sbjct: 348 ATRYWDS 354

>DSBD_SALTY (Q8ZKC3) Thiol:disulfide interchange protein dsbD precursor (EC|
           1.8.1.8) (Protein-disulfide reductase) (Disulfide
           reductase)
          Length = 567

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 9/91 (9%)
 Frame = -2

Query: 396 EQTPDVFQALFQLFWPLLLGHLMLLQYCLRPLIPRISSELKGVLLQLVSG-ASVVAFKTV 220
           E +    Q  F   W LL+G  +    C+ P+ P IS  + G   +L +G A ++AF  V
Sbjct: 158 ETSKPAAQLPFSALWALLIGIGIAFTPCVLPMYPLISGIVLGGRQRLSTGRALLLAFIYV 217

Query: 219 KPET*K--------SAAGTMGLLGMQHPPVV 151
           +             +AAG      +QHP V+
Sbjct: 218 QGMALTYTALGLVVAAAGLQFQAALQHPYVL 248

>DSBD_SALTI (Q8Z1A8) Thiol:disulfide interchange protein dsbD precursor (EC|
           1.8.1.8) (Protein-disulfide reductase) (Disulfide
           reductase)
          Length = 567

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 9/91 (9%)
 Frame = -2

Query: 396 EQTPDVFQALFQLFWPLLLGHLMLLQYCLRPLIPRISSELKGVLLQLVSG-ASVVAFKTV 220
           E +    Q  F   W LL+G  +    C+ P+ P IS  + G   +L +G A ++AF  V
Sbjct: 158 ETSKPAAQLPFSALWALLIGIGIAFTPCVLPMYPLISGIVLGGRQRLSTGRALLLAFIYV 217

Query: 219 KPET*K--------SAAGTMGLLGMQHPPVV 151
           +             +AAG      +QHP V+
Sbjct: 218 QGMALTYTALGLVVAAAGLQFQAALQHPYVL 248

>DLL3_HUMAN (Q9NYJ7) Delta-like protein 3 precursor (Drosophila Delta homolog|
           3)
          Length = 618

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 25/82 (30%), Positives = 29/82 (35%), Gaps = 7/82 (8%)
 Frame = +2

Query: 128 WPGAYCVQ--TTGGCCMPKSPIVPAADFYVSGFTVLNATTDAPETSCSSTP--FNSDEIL 295
           W G  C    +T  C  P+ P        V G    +    A   SCS TP  F      
Sbjct: 243 WTGPLCTVPVSTSSCLSPRGPSSATTGCLVPGPGPCDGNPCANGGSCSETPRSFECTCPR 302

Query: 296 GISGLRQYWSNIKC---PSNNG 352
           G  GLR   S + C   P  NG
Sbjct: 303 GFYGLRCEVSGVTCADGPCFNG 324

>DUOX_DROME (Q9VQH2) Dual oxidase (EC 1.6.3.1) (EC 1.11.1.-)|
          Length = 1475

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = +1

Query: 10  KQGFGMAFRR-ALLCLLGMLIASSAIAVSDSG 102
           K G G  F R ALL   G L+A+  +  S+SG
Sbjct: 63  KDGLGSKFNRTALLAFFGQLVANEIVMASESG 94

>Y1319_METJA (Q58715) Hypothetical sodium-dependent transporter MJ1319|
          Length = 492

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +1

Query: 1   SEIKQGFGMAFRRALLCLLGMLIASSAIAVSDSGIYY 111
           S I   F ++ ++ALL +L + I  S I  + +G+YY
Sbjct: 345 SAIIDKFSLSRKKALLAVLALFIIISPIFTTGAGLYY 381

>PERN_IPOBA (O04796) Neutral peroxidase precursor (EC 1.11.1.7) (SwPN1)|
          Length = 348

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 12/38 (31%), Positives = 21/38 (55%)
 Frame = +2

Query: 191 PAADFYVSGFTVLNATTDAPETSCSSTPFNSDEILGIS 304
           PA    V GF+V++      +T C+ TP +  ++L I+
Sbjct: 126 PANSNSVRGFSVIDQAKRNAQTKCADTPVSCADVLAIA 163

>Y549_NEIMA (P67302) UPF0161 protein NMA0549|
          Length = 73

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -2

Query: 348 LLLGHLMLLQYCLRPLIP 295
           LLLG +   QYC+ PLIP
Sbjct: 8   LLLGLIRFYQYCISPLIP 25

>Y1906_NEIMB (P67303) UPF0161 protein NMB1906|
          Length = 73

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -2

Query: 348 LLLGHLMLLQYCLRPLIP 295
           LLLG +   QYC+ PLIP
Sbjct: 8   LLLGLIRFYQYCISPLIP 25

>US22_HCMVA (P09722) Early nuclear protein HWLF1 (Tegument protein US22)|
          Length = 576

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
 Frame = +2

Query: 224 VLNATTDAPETSCSSTPFNSDEILGISGLRQYW-SNIKCPSNNGQKSWKSAWKTSG 388
           + N   D PET C+S   +   + G SG  +   S    PS +   + K AW   G
Sbjct: 488 IANRIGDTPETPCNSENEDDTTVEGTSGGPEAMDSQAPYPSEDSPTTEKEAWLQRG 543

>DPHB_THEVO (Q979Z8) Probable diphthine synthase (EC 2.1.1.98) (Diphthamide|
           biosynthesis methyltransferase)
          Length = 206

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 20/69 (28%), Positives = 31/69 (44%)
 Frame = -2

Query: 294 RISSELKGVLLQLVSGASVVAFKTVKPET*KSAAGTMGLLGMQHPPVVCTQYAPGHIKPX 115
           R S+  KG+ +++   AS V           +AAG +GLL  +  P V   +   +  P 
Sbjct: 94  RYSAMEKGIKVKIFENASAV----------NTAAGKIGLLHYKVGPPVSLPFVSSNFFPL 143

Query: 114 LVVDTRIRN 88
            V+D   RN
Sbjct: 144 SVIDKVKRN 152


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,202,688
Number of Sequences: 219361
Number of extensions: 787889
Number of successful extensions: 2330
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 2280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2326
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 1370455656
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)