| Clone Name | basd24j03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF182197.1|AF182197 Hordeum vulgare RNase S-like protein precursor (rsh1) gene, complete cds Length = 3758 Score = 323 bits (163), Expect = 2e-85 Identities = 163/163 (100%) Strand = Plus / Plus Query: 127 gtggccgggagcatactgtgtgcagaccaccggcggatgctgcatgcccaagagccccat 186 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2359 gtggccgggagcatactgtgtgcagaccaccggcggatgctgcatgcccaagagccccat 2418 Query: 187 cgtgccggcggccgacttctacgtctcgggctttactgtcttgaacgcgacgaccgacgc 246 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2419 cgtgccggcggccgacttctacgtctcgggctttactgtcttgaacgcgacgaccgacgc 2478 Query: 247 ccccgagaccagctgcagcagtactcctttcaactccgacgag 289 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2479 ccccgagaccagctgcagcagtactcctttcaactccgacgag 2521 Score = 236 bits (119), Expect = 4e-59 Identities = 126/127 (99%), Gaps = 1/127 (0%) Strand = Plus / Plus Query: 1 agtgaaatcaagcaaggtttcggtatggctttcaggagagcactgttgtgccttcttggc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1819 agtgaaatcaagcaaggtttcggtatggctttcaggagagcactgttgtgccttcttggc 1878 Query: 61 atgctgatagcttcctctgccattgccgtttctgattctggtatctactaccagnattgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1879 atgctgatagcttcctctgccattgccgtttctgattctggtatctactaccag-attgg 1937 Query: 121 tttgatg 127 ||||||| Sbjct: 1938 tttgatg 1944 Score = 218 bits (110), Expect = 1e-53 Identities = 110/110 (100%) Strand = Plus / Plus Query: 288 agattctgggaatcagcggtctaaggcagtactggagcaacatcaagtgccccagcaaca 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2611 agattctgggaatcagcggtctaaggcagtactggagcaacatcaagtgccccagcaaca 2670 Query: 348 acggccagaagagctggaagagcgcctggaagacgtccggcgtctgctcc 397 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2671 acggccagaagagctggaagagcgcctggaagacgtccggcgtctgctcc 2720
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 105 bits (53), Expect = 1e-19 Identities = 77/85 (90%) Strand = Plus / Minus Query: 313 gcagtactggagcaacatcaagtgccccagcaacaacggccagaagagctggaagagcgc 372 ||||||||||| |||||||| |||||||||||| | |||||||||| ||||||||| ||| Sbjct: 20864782 gcagtactggaacaacatcaggtgccccagcaagagcggccagaagggctggaagaacgc 20864723 Query: 373 ctggaagacgtccggcgtctgctcc 397 ||| |||||||||||||||||||| Sbjct: 20864722 gtgggagacgtccggcgtctgctcc 20864698 Score = 58.0 bits (29), Expect = 2e-05 Identities = 71/85 (83%) Strand = Plus / Minus Query: 127 gtggccgggagcatactgtgtgcagaccaccggcggatgctgcatgcccaagagccccat 186 |||||||||||| ||||| | |||||| | | ||||||||||||||| |||| | | | Sbjct: 20865311 gtggccgggagcgtactgcgcgcagacgaaggccggatgctgcatgccgaagaccgacgt 20865252 Query: 187 cgtgccggcggccgacttctacgtc 211 || ||||||| |||||||||||||| Sbjct: 20865251 cgcgccggcgtccgacttctacgtc 20865227 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 tactggagcaacatcaagtg 336 |||||||||||||||||||| Sbjct: 20855393 tactggagcaacatcaagtg 20855374
>dbj|AP006174.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0229B10 Length = 114509 Score = 105 bits (53), Expect = 1e-19 Identities = 77/85 (90%) Strand = Plus / Minus Query: 313 gcagtactggagcaacatcaagtgccccagcaacaacggccagaagagctggaagagcgc 372 ||||||||||| |||||||| |||||||||||| | |||||||||| ||||||||| ||| Sbjct: 57008 gcagtactggaacaacatcaggtgccccagcaagagcggccagaagggctggaagaacgc 56949 Query: 373 ctggaagacgtccggcgtctgctcc 397 ||| |||||||||||||||||||| Sbjct: 56948 gtgggagacgtccggcgtctgctcc 56924 Score = 58.0 bits (29), Expect = 2e-05 Identities = 71/85 (83%) Strand = Plus / Minus Query: 127 gtggccgggagcatactgtgtgcagaccaccggcggatgctgcatgcccaagagccccat 186 |||||||||||| ||||| | |||||| | | ||||||||||||||| |||| | | | Sbjct: 57537 gtggccgggagcgtactgcgcgcagacgaaggccggatgctgcatgccgaagaccgacgt 57478 Query: 187 cgtgccggcggccgacttctacgtc 211 || ||||||| |||||||||||||| Sbjct: 57477 cgcgccggcgtccgacttctacgtc 57453 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 tactggagcaacatcaagtg 336 |||||||||||||||||||| Sbjct: 47619 tactggagcaacatcaagtg 47600
>dbj|AP006067.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0569E11 Length = 157319 Score = 105 bits (53), Expect = 1e-19 Identities = 77/85 (90%) Strand = Plus / Minus Query: 313 gcagtactggagcaacatcaagtgccccagcaacaacggccagaagagctggaagagcgc 372 ||||||||||| |||||||| |||||||||||| | |||||||||| ||||||||| ||| Sbjct: 139811 gcagtactggaacaacatcaggtgccccagcaagagcggccagaagggctggaagaacgc 139752 Query: 373 ctggaagacgtccggcgtctgctcc 397 ||| |||||||||||||||||||| Sbjct: 139751 gtgggagacgtccggcgtctgctcc 139727 Score = 58.0 bits (29), Expect = 2e-05 Identities = 71/85 (83%) Strand = Plus / Minus Query: 127 gtggccgggagcatactgtgtgcagaccaccggcggatgctgcatgcccaagagccccat 186 |||||||||||| ||||| | |||||| | | ||||||||||||||| |||| | | | Sbjct: 140340 gtggccgggagcgtactgcgcgcagacgaaggccggatgctgcatgccgaagaccgacgt 140281 Query: 187 cgtgccggcggccgacttctacgtc 211 || ||||||| |||||||||||||| Sbjct: 140280 cgcgccggcgtccgacttctacgtc 140256 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 tactggagcaacatcaagtg 336 |||||||||||||||||||| Sbjct: 130422 tactggagcaacatcaagtg 130403
>dbj|AK109411.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-E09, full insert sequence Length = 1114 Score = 105 bits (53), Expect = 1e-19 Identities = 77/85 (90%) Strand = Plus / Plus Query: 313 gcagtactggagcaacatcaagtgccccagcaacaacggccagaagagctggaagagcgc 372 ||||||||||| |||||||| |||||||||||| | |||||||||| ||||||||| ||| Sbjct: 368 gcagtactggaacaacatcaggtgccccagcaagagcggccagaagggctggaagaacgc 427 Query: 373 ctggaagacgtccggcgtctgctcc 397 ||| |||||||||||||||||||| Sbjct: 428 gtgggagacgtccggcgtctgctcc 452 Score = 61.9 bits (31), Expect = 1e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 125 atgtggccgggagcatactgtgtgcagaccaccggcggatgctgcatgcccaagagcccc 184 |||||||||||||| ||||| | |||||| | | ||||||||||||||| |||| | | Sbjct: 180 atgtggccgggagcgtactgcgcgcagacgaaggccggatgctgcatgccgaagaccgac 239 Query: 185 atcgtgccggcggccgacttctacgtc 211 ||| ||||||| |||||||||||||| Sbjct: 240 gtcgcgccggcgtccgacttctacgtc 266
>dbj|AK119171.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-H08, full insert sequence Length = 1096 Score = 105 bits (53), Expect = 1e-19 Identities = 77/85 (90%) Strand = Plus / Plus Query: 313 gcagtactggagcaacatcaagtgccccagcaacaacggccagaagagctggaagagcgc 372 ||||||||||| |||||||| |||||||||||| | |||||||||| ||||||||| ||| Sbjct: 368 gcagtactggaacaacatcaggtgccccagcaagagcggccagaagggctggaagaacgc 427 Query: 373 ctggaagacgtccggcgtctgctcc 397 ||| |||||||||||||||||||| Sbjct: 428 gtgggagacgtccggcgtctgctcc 452 Score = 61.9 bits (31), Expect = 1e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 125 atgtggccgggagcatactgtgtgcagaccaccggcggatgctgcatgcccaagagcccc 184 |||||||||||||| ||||| | |||||| | | ||||||||||||||| |||| | | Sbjct: 180 atgtggccgggagcgtactgcgcgcagacgaaggccggatgctgcatgccgaagaccgac 239 Query: 185 atcgtgccggcggccgacttctacgtc 211 ||| ||||||| |||||||||||||| Sbjct: 240 gtcgcgccggcgtccgacttctacgtc 266
>dbj|AK104648.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-H05, full insert sequence Length = 1114 Score = 105 bits (53), Expect = 1e-19 Identities = 77/85 (90%) Strand = Plus / Plus Query: 313 gcagtactggagcaacatcaagtgccccagcaacaacggccagaagagctggaagagcgc 372 ||||||||||| |||||||| |||||||||||| | |||||||||| ||||||||| ||| Sbjct: 368 gcagtactggaacaacatcaggtgccccagcaagagcggccagaagggctggaagaacgc 427 Query: 373 ctggaagacgtccggcgtctgctcc 397 ||| |||||||||||||||||||| Sbjct: 428 gtgggagacgtccggcgtctgctcc 452 Score = 61.9 bits (31), Expect = 1e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 125 atgtggccgggagcatactgtgtgcagaccaccggcggatgctgcatgcccaagagcccc 184 |||||||||||||| ||||| | |||||| | | ||||||||||||||| |||| | | Sbjct: 180 atgtggccgggagcgtactgcgcgcagacgaaggccggatgctgcatgccgaagaccgac 239 Query: 185 atcgtgccggcggccgacttctacgtc 211 ||| ||||||| |||||||||||||| Sbjct: 240 gtcgcgccggcgtccgacttctacgtc 266
>dbj|AK104456.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-A10, full insert sequence Length = 1077 Score = 105 bits (53), Expect = 1e-19 Identities = 77/85 (90%) Strand = Plus / Plus Query: 313 gcagtactggagcaacatcaagtgccccagcaacaacggccagaagagctggaagagcgc 372 ||||||||||| |||||||| |||||||||||| | |||||||||| ||||||||| ||| Sbjct: 363 gcagtactggaacaacatcaggtgccccagcaagagcggccagaagggctggaagaacgc 422 Query: 373 ctggaagacgtccggcgtctgctcc 397 ||| |||||||||||||||||||| Sbjct: 423 gtgggagacgtccggcgtctgctcc 447 Score = 61.9 bits (31), Expect = 1e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 125 atgtggccgggagcatactgtgtgcagaccaccggcggatgctgcatgcccaagagcccc 184 |||||||||||||| ||||| | |||||| | | ||||||||||||||| |||| | | Sbjct: 175 atgtggccgggagcgtactgcgcgcagacgaaggccggatgctgcatgccgaagaccgac 234 Query: 185 atcgtgccggcggccgacttctacgtc 211 ||| ||||||| |||||||||||||| Sbjct: 235 gtcgcgccggcgtccgacttctacgtc 261
>dbj|AK104390.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-H04, full insert sequence Length = 1085 Score = 105 bits (53), Expect = 1e-19 Identities = 77/85 (90%) Strand = Plus / Plus Query: 313 gcagtactggagcaacatcaagtgccccagcaacaacggccagaagagctggaagagcgc 372 ||||||||||| |||||||| |||||||||||| | |||||||||| ||||||||| ||| Sbjct: 368 gcagtactggaacaacatcaggtgccccagcaagagcggccagaagggctggaagaacgc 427 Query: 373 ctggaagacgtccggcgtctgctcc 397 ||| |||||||||||||||||||| Sbjct: 428 gtgggagacgtccggcgtctgctcc 452 Score = 61.9 bits (31), Expect = 1e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 125 atgtggccgggagcatactgtgtgcagaccaccggcggatgctgcatgcccaagagcccc 184 |||||||||||||| ||||| | |||||| | | ||||||||||||||| |||| | | Sbjct: 180 atgtggccgggagcgtactgcgcgcagacgaaggccggatgctgcatgccgaagaccgac 239 Query: 185 atcgtgccggcggccgacttctacgtc 211 ||| ||||||| |||||||||||||| Sbjct: 240 gtcgcgccggcgtccgacttctacgtc 266
>dbj|AK104263.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-D05, full insert sequence Length = 1114 Score = 105 bits (53), Expect = 1e-19 Identities = 77/85 (90%) Strand = Plus / Plus Query: 313 gcagtactggagcaacatcaagtgccccagcaacaacggccagaagagctggaagagcgc 372 ||||||||||| |||||||| |||||||||||| | |||||||||| ||||||||| ||| Sbjct: 368 gcagtactggaacaacatcaggtgccccagcaagagcggccagaagggctggaagaacgc 427 Query: 373 ctggaagacgtccggcgtctgctcc 397 ||| |||||||||||||||||||| Sbjct: 428 gtgggagacgtccggcgtctgctcc 452 Score = 61.9 bits (31), Expect = 1e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 125 atgtggccgggagcatactgtgtgcagaccaccggcggatgctgcatgcccaagagcccc 184 |||||||||||||| ||||| | |||||| | | ||||||||||||||| |||| | | Sbjct: 180 atgtggccgggagcgtactgcgcgcagacgaaggccggatgctgcatgccgaagaccgac 239 Query: 185 atcgtgccggcggccgacttctacgtc 211 ||| ||||||| |||||||||||||| Sbjct: 240 gtcgcgccggcgtccgacttctacgtc 266
>dbj|AK104261.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-B09, full insert sequence Length = 1140 Score = 105 bits (53), Expect = 1e-19 Identities = 77/85 (90%) Strand = Plus / Plus Query: 313 gcagtactggagcaacatcaagtgccccagcaacaacggccagaagagctggaagagcgc 372 ||||||||||| |||||||| |||||||||||| | |||||||||| ||||||||| ||| Sbjct: 368 gcagtactggaacaacatcaggtgccccagcaagagcggccagaagggctggaagaacgc 427 Query: 373 ctggaagacgtccggcgtctgctcc 397 ||| |||||||||||||||||||| Sbjct: 428 gtgggagacgtccggcgtctgctcc 452 Score = 61.9 bits (31), Expect = 1e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 125 atgtggccgggagcatactgtgtgcagaccaccggcggatgctgcatgcccaagagcccc 184 |||||||||||||| ||||| | |||||| | | ||||||||||||||| |||| | | Sbjct: 180 atgtggccgggagcgtactgcgcgcagacgaaggccggatgctgcatgccgaagaccgac 239 Query: 185 atcgtgccggcggccgacttctacgtc 211 ||| ||||||| |||||||||||||| Sbjct: 240 gtcgcgccggcgtccgacttctacgtc 266
>dbj|AK104237.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-H08, full insert sequence Length = 1173 Score = 105 bits (53), Expect = 1e-19 Identities = 77/85 (90%) Strand = Plus / Plus Query: 313 gcagtactggagcaacatcaagtgccccagcaacaacggccagaagagctggaagagcgc 372 ||||||||||| |||||||| |||||||||||| | |||||||||| ||||||||| ||| Sbjct: 368 gcagtactggaacaacatcaggtgccccagcaagagcggccagaagggctggaagaacgc 427 Query: 373 ctggaagacgtccggcgtctgctcc 397 ||| |||||||||||||||||||| Sbjct: 428 gtgggagacgtccggcgtctgctcc 452 Score = 61.9 bits (31), Expect = 1e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 125 atgtggccgggagcatactgtgtgcagaccaccggcggatgctgcatgcccaagagcccc 184 |||||||||||||| ||||| | |||||| | | ||||||||||||||| |||| | | Sbjct: 180 atgtggccgggagcgtactgcgcgcagacgaaggccggatgctgcatgccgaagaccgac 239 Query: 185 atcgtgccggcggccgacttctacgtc 211 ||| ||||||| |||||||||||||| Sbjct: 240 gtcgcgccggcgtccgacttctacgtc 266
>dbj|AK061442.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-C07, full insert sequence Length = 1151 Score = 105 bits (53), Expect = 1e-19 Identities = 77/85 (90%) Strand = Plus / Plus Query: 313 gcagtactggagcaacatcaagtgccccagcaacaacggccagaagagctggaagagcgc 372 ||||||||||| |||||||| |||||||||||| | |||||||||| ||||||||| ||| Sbjct: 368 gcagtactggaacaacatcaggtgccccagcaagagcggccagaagggctggaagaacgc 427 Query: 373 ctggaagacgtccggcgtctgctcc 397 ||| |||||||||||||||||||| Sbjct: 428 gtgggagacgtccggcgtctgctcc 452 Score = 61.9 bits (31), Expect = 1e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 125 atgtggccgggagcatactgtgtgcagaccaccggcggatgctgcatgcccaagagcccc 184 |||||||||||||| ||||| | |||||| | | ||||||||||||||| |||| | | Sbjct: 180 atgtggccgggagcgtactgcgcgcagacgaaggccggatgctgcatgccgaagaccgac 239 Query: 185 atcgtgccggcggccgacttctacgtc 211 ||| ||||||| |||||||||||||| Sbjct: 240 gtcgcgccggcgtccgacttctacgtc 266
>dbj|AK060036.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-A10, full insert sequence Length = 1127 Score = 105 bits (53), Expect = 1e-19 Identities = 77/85 (90%) Strand = Plus / Plus Query: 313 gcagtactggagcaacatcaagtgccccagcaacaacggccagaagagctggaagagcgc 372 ||||||||||| |||||||| |||||||||||| | |||||||||| ||||||||| ||| Sbjct: 344 gcagtactggaacaacatcaggtgccccagcaagagcggccagaagggctggaagaacgc 403 Query: 373 ctggaagacgtccggcgtctgctcc 397 ||| |||||||||||||||||||| Sbjct: 404 gtgggagacgtccggcgtctgctcc 428 Score = 46.1 bits (23), Expect = 0.086 Identities = 47/55 (85%) Strand = Plus / Plus Query: 125 atgtggccgggagcatactgtgtgcagaccaccggcggatgctgcatgcccaaga 179 |||||||||||||| ||||| | |||||| | | ||||||||||||||| |||| Sbjct: 180 atgtggccgggagcgtactgcgcgcagacgaaggccggatgctgcatgccgaaga 234
>dbj|AK059757.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-D06, full insert sequence Length = 1173 Score = 105 bits (53), Expect = 1e-19 Identities = 77/85 (90%) Strand = Plus / Plus Query: 313 gcagtactggagcaacatcaagtgccccagcaacaacggccagaagagctggaagagcgc 372 ||||||||||| |||||||| |||||||||||| | |||||||||| ||||||||| ||| Sbjct: 368 gcagtactggaacaacatcaggtgccccagcaagagcggccagaagggctggaagaacgc 427 Query: 373 ctggaagacgtccggcgtctgctcc 397 ||| |||||||||||||||||||| Sbjct: 428 gtgggagacgtccggcgtctgctcc 452 Score = 61.9 bits (31), Expect = 1e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 125 atgtggccgggagcatactgtgtgcagaccaccggcggatgctgcatgcccaagagcccc 184 |||||||||||||| ||||| | |||||| | | ||||||||||||||| |||| | | Sbjct: 180 atgtggccgggagcgtactgcgcgcagacgaaggccggatgctgcatgccgaagaccgac 239 Query: 185 atcgtgccggcggccgacttctacgtc 211 ||| ||||||| |||||||||||||| Sbjct: 240 gtcgcgccggcgtccgacttctacgtc 266
>gb|U66241.1|ZMU66241 Zea mays S-like RNase (kin1) mRNA, complete cds Length = 988 Score = 103 bits (52), Expect = 4e-19 Identities = 76/84 (90%) Strand = Plus / Plus Query: 314 cagtactggagcaacatcaagtgccccagcaacaacggccagaagagctggaagagcgcc 373 ||||||||||||||||||| |||||||||||||||||| |||| |||||||||| |||| Sbjct: 313 cagtactggagcaacatcaggtgccccagcaacaacgggcagagcagctggaagaacgcc 372 Query: 374 tggaagacgtccggcgtctgctcc 397 ||||||| | |||||| ||||||| Sbjct: 373 tggaagaaggccggcgcctgctcc 396
>gb|AY104404.1| Zea mays PCO098786 mRNA sequence Length = 1018 Score = 89.7 bits (45), Expect = 6e-15 Identities = 76/85 (89%), Gaps = 1/85 (1%) Strand = Plus / Plus Query: 314 cagtactggagcaacatcaagtgccccagcaacaac-ggccagaagagctggaagagcgc 372 ||||||||||||||||||| |||||||||||||||| || |||| |||||||||| ||| Sbjct: 324 cagtactggagcaacatcaggtgccccagcaacaacggggcagagcagctggaagaacgc 383 Query: 373 ctggaagacgtccggcgtctgctcc 397 |||||||| | |||||| ||||||| Sbjct: 384 ctggaagaaggccggcgcctgctcc 408
>emb|BX005213.15| Mouse DNA sequence from clone RP23-412I2 on chromosome X, complete sequence Length = 96535 Score = 44.1 bits (22), Expect = 0.34 Identities = 22/22 (100%) Strand = Plus / Plus Query: 347 aacggccagaagagctggaaga 368 |||||||||||||||||||||| Sbjct: 54927 aacggccagaagagctggaaga 54948
>gb|AC005018.2| Homo sapiens BAC clone GS1-223D4 from 7, complete sequence Length = 107527 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 320 tggagcaacatcaagtgccccagca 344 |||||||| |||||||||||||||| Sbjct: 64507 tggagcaagatcaagtgccccagca 64531
>gb|AC017104.8| Homo sapiens BAC clone RP11-562I5 from 2, complete sequence Length = 168880 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 356 aagagctggaagagcgcctgg 376 ||||||||||||||||||||| Sbjct: 74737 aagagctggaagagcgcctgg 74717
>gb|AY056038.1| Oryza sativa RNase S-like protein mRNA, complete cds Length = 999 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 tactggagcaacatcaagtg 336 |||||||||||||||||||| Sbjct: 321 tactggagcaacatcaagtg 340
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 117 ttggtttgatgtggccggga 136 |||||||||||||||||||| Sbjct: 2657933 ttggtttgatgtggccggga 2657914
>emb|Z81540.1|CEF46B3 Caenorhabditis elegans Cosmid F46B3, complete sequence Length = 39165 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 tcaggagagcactgttgtgc 51 |||||||||||||||||||| Sbjct: 31799 tcaggagagcactgttgtgc 31780
>gb|AC158982.2| Mus musculus BAC clone RP23-235N21 from chromosome 14, complete sequence Length = 208135 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tttctgattctggtatctac 108 |||||||||||||||||||| Sbjct: 130142 tttctgattctggtatctac 130123
>gb|AY061961.1| Oryza sativa drought-induced S-like ribonuclease mRNA, complete cds Length = 1050 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 tactggagcaacatcaagtg 336 |||||||||||||||||||| Sbjct: 362 tactggagcaacatcaagtg 381
>emb|AJ229043.1| Homo sapiens 959 kb contig between AML1 and CBR1 on chromosome 21q22, segment 3/3 Length = 288002 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 25 atggctttcaggagagcactgttg 48 ||||||||||||||| |||||||| Sbjct: 80871 atggctttcaggagaacactgttg 80894
>gb|AC152833.3| Ornithorhynchus anatinus BAC clone OABb-6A1 from chromosome unknown, complete sequence Length = 141309 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 135 gagcatactgtgtgcagaccaccg 158 |||| ||||||||||||||||||| Sbjct: 43861 gagcttactgtgtgcagaccaccg 43838
>gb|DQ427569.1| Sorghum propinquum locus CSU705 genomic sequence Length = 667 Score = 40.1 bits (20), Expect = 5.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 127 gtggccgggagcatactgtgtgcagaccaccggcggatgctgca 170 |||||| ||||||||||| | |||||||| || |||||||||| Sbjct: 352 gtggccaggagcatactgcgagcagaccaacgctggatgctgca 395
>gb|DQ427568.1| Sorghum bicolor voucher PI585454 locus CSU705 genomic sequence Length = 691 Score = 40.1 bits (20), Expect = 5.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 127 gtggccgggagcatactgtgtgcagaccaccggcggatgctgca 170 |||||| ||||||||||| | |||||||| || |||||||||| Sbjct: 360 gtggccaggagcatactgcgagcagaccaacgctggatgctgca 403
>gb|DQ427567.1| Sorghum bicolor voucher PI267539 locus CSU705 genomic sequence Length = 691 Score = 40.1 bits (20), Expect = 5.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 127 gtggccgggagcatactgtgtgcagaccaccggcggatgctgca 170 |||||| ||||||||||| | |||||||| || |||||||||| Sbjct: 360 gtggccaggagcatactgcgagcagaccaacgctggatgctgca 403
>gb|DQ427566.1| Sorghum bicolor voucher PI267408 locus CSU705 genomic sequence Length = 691 Score = 40.1 bits (20), Expect = 5.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 127 gtggccgggagcatactgtgtgcagaccaccggcggatgctgca 170 |||||| ||||||||||| | |||||||| || |||||||||| Sbjct: 360 gtggccaggagcatactgcgagcagaccaacgctggatgctgca 403
>gb|DQ427565.1| Sorghum bicolor voucher PI221607 locus CSU705 genomic sequence Length = 702 Score = 40.1 bits (20), Expect = 5.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 127 gtggccgggagcatactgtgtgcagaccaccggcggatgctgca 170 |||||| ||||||||||| | |||||||| || |||||||||| Sbjct: 368 gtggccaggagcatactgcgagcagaccaacgctggatgctgca 411
>gb|DQ427564.1| Sorghum bicolor voucher PI152702 locus CSU705 genomic sequence Length = 684 Score = 40.1 bits (20), Expect = 5.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 127 gtggccgggagcatactgtgtgcagaccaccggcggatgctgca 170 |||||| ||||||||||| | |||||||| || |||||||||| Sbjct: 353 gtggccaggagcatactgcgagcagaccaacgctggatgctgca 396
>gb|DQ427563.1| Sorghum bicolor voucher NSL92371 locus CSU705 genomic sequence Length = 691 Score = 40.1 bits (20), Expect = 5.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 127 gtggccgggagcatactgtgtgcagaccaccggcggatgctgca 170 |||||| ||||||||||| | |||||||| || |||||||||| Sbjct: 360 gtggccaggagcatactgcgagcagaccaacgctggatgctgca 403
>gb|DQ427562.1| Sorghum bicolor voucher NSL87902 locus CSU705 genomic sequence Length = 691 Score = 40.1 bits (20), Expect = 5.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 127 gtggccgggagcatactgtgtgcagaccaccggcggatgctgca 170 |||||| ||||||||||| | |||||||| || |||||||||| Sbjct: 360 gtggccaggagcatactgcgagcagaccaacgctggatgctgca 403
>gb|DQ427561.1| Sorghum bicolor voucher NSL87666 locus CSU705 genomic sequence Length = 702 Score = 40.1 bits (20), Expect = 5.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 127 gtggccgggagcatactgtgtgcagaccaccggcggatgctgca 170 |||||| ||||||||||| | |||||||| || |||||||||| Sbjct: 368 gtggccaggagcatactgcgagcagaccaacgctggatgctgca 411
>gb|DQ427560.1| Sorghum bicolor voucher NSL77217 locus CSU705 genomic sequence Length = 691 Score = 40.1 bits (20), Expect = 5.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 127 gtggccgggagcatactgtgtgcagaccaccggcggatgctgca 170 |||||| ||||||||||| | |||||||| || |||||||||| Sbjct: 360 gtggccaggagcatactgcgagcagaccaacgctggatgctgca 403
>gb|DQ427559.1| Sorghum bicolor voucher NSL77034 locus CSU705 genomic sequence Length = 691 Score = 40.1 bits (20), Expect = 5.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 127 gtggccgggagcatactgtgtgcagaccaccggcggatgctgca 170 |||||| ||||||||||| | |||||||| || |||||||||| Sbjct: 360 gtggccaggagcatactgcgagcagaccaacgctggatgctgca 403
>gb|DQ427558.1| Sorghum bicolor voucher NSL56174 locus CSU705 genomic sequence Length = 702 Score = 40.1 bits (20), Expect = 5.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 127 gtggccgggagcatactgtgtgcagaccaccggcggatgctgca 170 |||||| ||||||||||| | |||||||| || |||||||||| Sbjct: 368 gtggccaggagcatactgcgagcagaccaacgctggatgctgca 411
>gb|DQ427557.1| Sorghum bicolor voucher NSL56003 locus CSU705 genomic sequence Length = 691 Score = 40.1 bits (20), Expect = 5.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 127 gtggccgggagcatactgtgtgcagaccaccggcggatgctgca 170 |||||| ||||||||||| | |||||||| || |||||||||| Sbjct: 360 gtggccaggagcatactgcgagcagaccaacgctggatgctgca 403
>gb|DQ427556.1| Sorghum bicolor voucher NSL55243 locus CSU705 genomic sequence Length = 691 Score = 40.1 bits (20), Expect = 5.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 127 gtggccgggagcatactgtgtgcagaccaccggcggatgctgca 170 |||||| ||||||||||| | |||||||| || |||||||||| Sbjct: 360 gtggccaggagcatactgcgagcagaccaacgctggatgctgca 403
>gb|DQ427555.1| Sorghum bicolor voucher NSL51365 locus CSU705 genomic sequence Length = 702 Score = 40.1 bits (20), Expect = 5.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 127 gtggccgggagcatactgtgtgcagaccaccggcggatgctgca 170 |||||| ||||||||||| | |||||||| || |||||||||| Sbjct: 368 gtggccaggagcatactgcgagcagaccaacgctggatgctgca 411
>gb|DQ427554.1| Sorghum bicolor voucher NSL51030 locus CSU705 genomic sequence Length = 691 Score = 40.1 bits (20), Expect = 5.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 127 gtggccgggagcatactgtgtgcagaccaccggcggatgctgca 170 |||||| ||||||||||| | |||||||| || |||||||||| Sbjct: 360 gtggccaggagcatactgcgagcagaccaacgctggatgctgca 403
>gb|DQ427553.1| Sorghum bicolor voucher NSL50875 locus CSU705 genomic sequence Length = 691 Score = 40.1 bits (20), Expect = 5.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 127 gtggccgggagcatactgtgtgcagaccaccggcggatgctgca 170 |||||| ||||||||||| | |||||||| || |||||||||| Sbjct: 360 gtggccaggagcatactgcgagcagaccaacgctggatgctgca 403
>gb|DQ427552.1| Sorghum bicolor voucher BTx623 locus CSU705 genomic sequence Length = 702 Score = 40.1 bits (20), Expect = 5.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 127 gtggccgggagcatactgtgtgcagaccaccggcggatgctgca 170 |||||| ||||||||||| | |||||||| || |||||||||| Sbjct: 368 gtggccaggagcatactgcgagcagaccaacgctggatgctgca 411
>gb|AF495872.1| Triticum aestivum S-like RNase mRNA, complete cds Length = 901 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 125 atgtggccgggagcatactgtgtg 148 |||||||| ||||||||||||||| Sbjct: 133 atgtggcctggagcatactgtgtg 156
>gb|AF439449.1|AF439449 Oryza sativa RNase S-like protein gene, complete cds Length = 1909 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 tactggagcaacatcaagtg 336 |||||||||||||||||||| Sbjct: 1119 tactggagcaacatcaagtg 1138
>ref|NM_075580.2| Caenorhabditis elegans Serpentine Receptor, class Z family member (srz-18) (srz-18) mRNA, complete cds Length = 981 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 32 tcaggagagcactgttgtgc 51 |||||||||||||||||||| Sbjct: 671 tcaggagagcactgttgtgc 652
>gb|AF015262.2|AF015262 Homo sapiens chromosome 21 clone Pac 255P7 map 21q-AML, complete sequence Length = 250598 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 25 atggctttcaggagagcactgttg 48 ||||||||||||||| |||||||| Sbjct: 207132 atggctttcaggagaacactgttg 207109
>gb|AF303465.1|AF303465 Unidentified UvrB-like protein gene, partial cds Length = 114 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 359 agctggaagagcgcctggaagacg 382 ||||||||||| |||||||||||| Sbjct: 68 agctggaagagggcctggaagacg 91
>dbj|BS000195.1| Pan troglodytes chromosome 22 clone:PTB-014E11, map 22, complete sequences Length = 251753 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 25 atggctttcaggagagcactgttg 48 ||||||||||||||| |||||||| Sbjct: 137539 atggctttcaggagaacactgttg 137516
>dbj|AK119186.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-G06, full insert sequence Length = 930 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 tactggagcaacatcaagtg 336 |||||||||||||||||||| Sbjct: 362 tactggagcaacatcaagtg 381
>dbj|AK104888.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-B11, full insert sequence Length = 997 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 tactggagcaacatcaagtg 336 |||||||||||||||||||| Sbjct: 358 tactggagcaacatcaagtg 377
>dbj|AK104599.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-G01, full insert sequence Length = 1065 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 tactggagcaacatcaagtg 336 |||||||||||||||||||| Sbjct: 358 tactggagcaacatcaagtg 377
>dbj|AK104553.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-E10, full insert sequence Length = 1068 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 tactggagcaacatcaagtg 336 |||||||||||||||||||| Sbjct: 358 tactggagcaacatcaagtg 377
>dbj|AK104509.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-G12, full insert sequence Length = 1069 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 tactggagcaacatcaagtg 336 |||||||||||||||||||| Sbjct: 362 tactggagcaacatcaagtg 381
>dbj|AK104656.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-C11, full insert sequence Length = 1069 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 tactggagcaacatcaagtg 336 |||||||||||||||||||| Sbjct: 362 tactggagcaacatcaagtg 381
>dbj|AK104454.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-A06, full insert sequence Length = 1068 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 tactggagcaacatcaagtg 336 |||||||||||||||||||| Sbjct: 358 tactggagcaacatcaagtg 377
>dbj|AK104221.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-E03, full insert sequence Length = 1069 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 tactggagcaacatcaagtg 336 |||||||||||||||||||| Sbjct: 362 tactggagcaacatcaagtg 381
>dbj|AK098949.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013057M18, full insert sequence Length = 1052 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 tactggagcaacatcaagtg 336 |||||||||||||||||||| Sbjct: 362 tactggagcaacatcaagtg 381
>emb|AL163267.2|HS21C067 Homo sapiens chromosome 21 segment HS21C067 Length = 340000 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 25 atggctttcaggagagcactgttg 48 ||||||||||||||| |||||||| Sbjct: 109206 atggctttcaggagaacactgttg 109183
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 358 gagctggaagagcgcctggaagac 381 |||||||||| ||||||||||||| Sbjct: 1071189 gagctggaagggcgcctggaagac 1071212
>dbj|AK061438.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-B06, full insert sequence Length = 1072 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 317 tactggagcaacatcaagtg 336 |||||||||||||||||||| Sbjct: 362 tactggagcaacatcaagtg 381 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,736,350 Number of Sequences: 3902068 Number of extensions: 2736350 Number of successful extensions: 50097 Number of sequences better than 10.0: 63 Number of HSP's better than 10.0 without gapping: 63 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 49890 Number of HSP's gapped (non-prelim): 206 length of query: 397 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 375 effective length of database: 17,147,199,772 effective search space: 6430199914500 effective search space used: 6430199914500 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)