ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd24i20 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1029 bits (519), Expect = 0.0 Identities = 519/519 (100%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119100 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 119041 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119040 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 118981 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118980 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 118921 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118920 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 118861 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118860 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 118801 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118800 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 118741 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118740 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 118681 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118680 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 118621 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||||||||||||||||| Sbjct: 118620 aatccaatgccccgaaaacccaaggtttcctccgcaagg 118582 Score = 1029 bits (519), Expect = 0.0 Identities = 519/519 (100%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96056 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 96115 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96116 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 96175 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96176 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 96235 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96236 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 96295 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96296 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 96355 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96356 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 96415 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96416 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 96475 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96476 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 96535 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||||||||||||||||| Sbjct: 96536 aatccaatgccccgaaaacccaaggtttcctccgcaagg 96574
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1029 bits (519), Expect = 0.0 Identities = 519/519 (100%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119100 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 119041 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119040 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 118981 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118980 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 118921 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118920 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 118861 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118860 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 118801 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118800 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 118741 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118740 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 118681 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118680 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 118621 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||||||||||||||||| Sbjct: 118620 aatccaatgccccgaaaacccaaggtttcctccgcaagg 118582 Score = 1029 bits (519), Expect = 0.0 Identities = 519/519 (100%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96056 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 96115 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96116 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 96175 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96176 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 96235 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96236 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 96295 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96296 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 96355 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96356 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 96415 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96416 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 96475 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96476 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 96535 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||||||||||||||||| Sbjct: 96536 aatccaatgccccgaaaacccaaggtttcctccgcaagg 96574
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1029 bits (519), Expect = 0.0 Identities = 519/519 (100%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119049 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 118990 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118989 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 118930 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118929 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 118870 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118869 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 118810 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118809 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 118750 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118749 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 118690 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118689 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 118630 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118629 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 118570 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||||||||||||||||| Sbjct: 118569 aatccaatgccccgaaaacccaaggtttcctccgcaagg 118531 Score = 1029 bits (519), Expect = 0.0 Identities = 519/519 (100%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96001 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 96060 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96061 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 96120 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96121 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 96180 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96181 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 96240 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96241 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 96300 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96301 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 96360 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96361 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 96420 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96421 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 96480 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||||||||||||||||| Sbjct: 96481 aatccaatgccccgaaaacccaaggtttcctccgcaagg 96519
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1029 bits (519), Expect = 0.0 Identities = 519/519 (100%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508634 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 31508693 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508694 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 31508753 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508754 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 31508813 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508814 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 31508873 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508874 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 31508933 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508934 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 31508993 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508994 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 31509053 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31509054 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 31509113 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||||||||||||||||| Sbjct: 31509114 aatccaatgccccgaaaacccaaggtttcctccgcaagg 31509152 Score = 729 bits (368), Expect = 0.0 Identities = 368/368 (100%) Strand = Plus / Minus Query: 160 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 219 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513317 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11513258 Query: 220 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 279 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513257 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 11513198 Query: 280 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513197 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 11513138 Query: 340 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 399 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513137 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 11513078 Query: 400 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 459 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513077 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 11513018 Query: 460 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 519 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11513017 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 11512958 Query: 520 ccgcaagg 527 |||||||| Sbjct: 11512957 ccgcaagg 11512950 Score = 511 bits (258), Expect = e-142 Identities = 264/266 (99%) Strand = Plus / Minus Query: 262 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 321 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320663 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 27320604 Query: 322 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 381 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320603 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 27320544 Query: 382 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 441 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320543 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 27320484 Query: 442 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 501 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27320483 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccct 27320424 Query: 502 gaaaacccaaggtttcctccgcaagg 527 |||||||||||||||||||| ||||| Sbjct: 27320423 gaaaacccaaggtttcctccacaagg 27320398 Score = 133 bits (67), Expect = 6e-28 Identities = 73/75 (97%) Strand = Plus / Minus Query: 176 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 235 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25722178 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25722119 Query: 236 taaaggaggtggggg 250 ||||||||||||||| Sbjct: 25722118 taaaggaggtggggg 25722104 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 179 gtcgagagggaaacagcccggatcaccagctaaggccc 216 |||||||||||||||||||||||||||||||||||||| Sbjct: 28582253 gtcgagagggaaacagcccggatcaccagctaaggccc 28582290 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 78 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 132 |||| ||||||||||||||| |||||| |||||| || |||||||| |||||||| Sbjct: 35945442 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacctaaaaataa 35945496
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1029 bits (519), Expect = 0.0 Identities = 519/519 (100%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83962 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 83903 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83902 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 83843 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83842 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 83783 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83782 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 83723 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83722 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 83663 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83662 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 83603 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83602 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 83543 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 83542 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 83483 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||||||||||||||||| Sbjct: 83482 aatccaatgccccgaaaacccaaggtttcctccgcaagg 83444
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1029 bits (519), Expect = 0.0 Identities = 519/519 (100%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119069 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 119010 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119009 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 118950 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118949 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 118890 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118889 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 118830 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118829 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 118770 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118769 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 118710 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118709 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 118650 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118649 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 118590 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||||||||||||||||| Sbjct: 118589 aatccaatgccccgaaaacccaaggtttcctccgcaagg 118551 Score = 1029 bits (519), Expect = 0.0 Identities = 519/519 (100%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96049 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 96108 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96109 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 96168 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96169 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 96228 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96229 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 96288 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96289 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 96348 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96349 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 96408 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96409 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 96468 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96469 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 96528 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||||||||||||||||| Sbjct: 96529 aatccaatgccccgaaaacccaaggtttcctccgcaagg 96567
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1029 bits (519), Expect = 0.0 Identities = 519/519 (100%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123097 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 123156 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123157 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 123216 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123217 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 123276 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123277 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 123336 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123337 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 123396 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123397 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 123456 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123457 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 123516 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123517 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 123576 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||||||||||||||||| Sbjct: 123577 aatccaatgccccgaaaacccaaggtttcctccgcaagg 123615 Score = 1029 bits (519), Expect = 0.0 Identities = 519/519 (100%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14823 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 14882 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14883 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 14942 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14943 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 15002 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15003 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 15062 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15063 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 15122 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15123 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 15182 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15183 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 15242 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15243 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 15302 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||||||||||||||||| Sbjct: 15303 aatccaatgccccgaaaacccaaggtttcctccgcaagg 15341
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1029 bits (519), Expect = 0.0 Identities = 519/519 (100%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141631 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 141690 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141691 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 141750 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141751 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 141810 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141811 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 141870 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141871 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 141930 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141931 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 141990 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141991 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 142050 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142051 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 142110 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||||||||||||||||| Sbjct: 142111 aatccaatgccccgaaaacccaaggtttcctccgcaagg 142149
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1029 bits (519), Expect = 0.0 Identities = 519/519 (100%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268983 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 9269042 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269043 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 9269102 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269103 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 9269162 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269163 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 9269222 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269223 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 9269282 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269283 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 9269342 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269343 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 9269402 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9269403 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 9269462 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||||||||||||||||| Sbjct: 9269463 aatccaatgccccgaaaacccaaggtttcctccgcaagg 9269501 Score = 1029 bits (519), Expect = 0.0 Identities = 519/519 (100%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228483 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 9228542 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228543 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 9228602 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228603 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 9228662 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228663 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 9228722 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228723 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 9228782 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228783 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 9228842 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228843 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 9228902 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228903 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 9228962 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||||||||||||||||| Sbjct: 9228963 aatccaatgccccgaaaacccaaggtttcctccgcaagg 9229001 Score = 1029 bits (519), Expect = 0.0 Identities = 519/519 (100%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165071 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 9165130 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165131 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 9165190 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165191 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 9165250 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165251 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 9165310 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165311 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 9165370 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165371 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 9165430 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165431 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 9165490 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9165491 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 9165550 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||||||||||||||||| Sbjct: 9165551 aatccaatgccccgaaaacccaaggtttcctccgcaagg 9165589 Score = 1029 bits (519), Expect = 0.0 Identities = 519/519 (100%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056897 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 9056956 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056957 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 9057016 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057017 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 9057076 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057077 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 9057136 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057137 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 9057196 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057197 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 9057256 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057257 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 9057316 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9057317 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 9057376 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||||||||||||||||| Sbjct: 9057377 aatccaatgccccgaaaacccaaggtttcctccgcaagg 9057415
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1029 bits (519), Expect = 0.0 Identities = 519/519 (100%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938968 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 19939027 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939028 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 19939087 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939088 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 19939147 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939148 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 19939207 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939208 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 19939267 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939268 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 19939327 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939328 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 19939387 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19939388 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 19939447 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||||||||||||||||| Sbjct: 19939448 aatccaatgccccgaaaacccaaggtttcctccgcaagg 19939486 Score = 1021 bits (515), Expect = 0.0 Identities = 518/519 (99%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387835 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 10387894 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387895 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 10387954 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387955 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 10388014 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388015 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 10388074 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388075 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 10388134 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388135 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 10388194 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 10388195 gtgggatgtcaaaatgcatcggtaggagagcgttccgccttagagggaagcaaccgcgaa 10388254 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10388255 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 10388314 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||||||||||||||||| Sbjct: 10388315 aatccaatgccccgaaaacccaaggtttcctccgcaagg 10388353 Score = 1021 bits (515), Expect = 0.0 Identities = 518/519 (99%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276463 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 10276404 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276403 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 10276344 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276343 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 10276284 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276283 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 10276224 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276223 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 10276164 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 10276163 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcaatctgccgaagct 10276104 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276103 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 10276044 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276043 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 10275984 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||||||||||||||||| Sbjct: 10275983 aatccaatgccccgaaaacccaaggtttcctccgcaagg 10275945 Score = 77.8 bits (39), Expect = 3e-11 Identities = 39/39 (100%) Strand = Plus / Minus Query: 316 gatcgagcgcccttgcgctgaagatgaacggggctaagc 354 ||||||||||||||||||||||||||||||||||||||| Sbjct: 15833511 gatcgagcgcccttgcgctgaagatgaacggggctaagc 15833473 Score = 54.0 bits (27), Expect = 5e-04 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 85 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 144 ||||||||||||| |||| ||| |||||||||| ||| ||||||||||| ||||||| | Sbjct: 781053 gtaccaaatcgagacaaagtctaaatactagatgtga--caaaaataaca-gggtcaatg 781109 Query: 145 tcggccagtgagacgatgggggataagcttcatcgtcgagag 186 || || ||||||| | ||| ||||| || ||||||||||| Sbjct: 781110 tcagctagtgagatggcgggaaataagttttatcgtcgagag 781151 Score = 48.1 bits (24), Expect = 0.029 Identities = 51/60 (85%) Strand = Plus / Minus Query: 257 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 316 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 2736127 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 2736068
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1029 bits (519), Expect = 0.0 Identities = 519/519 (100%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241298 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 9241239 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241238 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 9241179 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241178 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 9241119 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241118 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 9241059 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241058 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 9240999 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240998 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 9240939 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240938 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 9240879 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9240878 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 9240819 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||||||||||||||||| Sbjct: 9240818 aatccaatgccccgaaaacccaaggtttcctccgcaagg 9240780 Score = 188 bits (95), Expect = 1e-44 Identities = 151/167 (90%), Gaps = 2/167 (1%) Strand = Plus / Minus Query: 50 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 109 |||||||||| |||| |||||||| ||| ||||||| ||||||||||| ||||||||||| Sbjct: 3580549 ggtaaagcaccgtttaggtgcgggttgcacgagcggcaccaaatcgagacaaactctgaa 3580490 Query: 110 tactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggata 169 ||||||||||||||||||| |||||||||||| | |||| ||||||||||||||||||| Sbjct: 3580489 tactagatatgacccaaaagtaacaggggtcatgatcgg-tagtgagacgatgggggata 3580431 Query: 170 agcttcatcgtcgagagggaaac-agcccggatcaccagctaaggcc 215 ||||||||||||||||| ||||| | ||| |||||||||||||||| Sbjct: 3580430 agcttcatcgtcgagagagaaacaaccccaaatcaccagctaaggcc 3580384 Score = 109 bits (55), Expect = 9e-21 Identities = 90/102 (88%), Gaps = 6/102 (5%) Strand = Plus / Minus Query: 204 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtggggg------tgcaaag 257 ||||||||| || ||||||||||||| ||| ||||| |||||||||| ||||||| Sbjct: 3580385 ccagctaagaccactaaatgaccgcttagttataaatgaggtgggggggggggtgcaaag 3580326 Query: 258 acagccaggaggtttgcctagaagcagccaccctttaaagag 299 ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 3580325 acaaccaggaggtttgcctagaagcagccaccctttaaagag 3580284 Score = 77.8 bits (39), Expect = 3e-11 Identities = 45/47 (95%) Strand = Plus / Minus Query: 365 agctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 411 |||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 3580285 agctatgggatatcaaaatgcatcggtaggggagcgttccgccttag 3580239 Score = 48.1 bits (24), Expect = 0.029 Identities = 36/40 (90%) Strand = Plus / Minus Query: 329 tgcgctgaagatgaacggggctaagcgatctgccgaagct 368 |||| |||| ||||| |||||||||||||||||| ||||| Sbjct: 22199132 tgcgttgaaaatgaatggggctaagcgatctgccaaagct 22199093 Score = 40.1 bits (20), Expect = 7.1 Identities = 35/40 (87%) Strand = Plus / Minus Query: 203 accagctaaggcccctaaatgaccgctcagtgataaagga 242 ||||| |||||| ||||||||||||||| |||| ||||| Sbjct: 3319509 accagataaggcttctaaatgaccgctcaatgatgaagga 3319470
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1029 bits (519), Expect = 0.0 Identities = 519/519 (100%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599150 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 31599209 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599210 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 31599269 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599270 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 31599329 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599330 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 31599389 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599390 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 31599449 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599450 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 31599509 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599510 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 31599569 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31599570 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 31599629 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||||||||||||||||| Sbjct: 31599630 aatccaatgccccgaaaacccaaggtttcctccgcaagg 31599668 Score = 729 bits (368), Expect = 0.0 Identities = 368/368 (100%) Strand = Plus / Minus Query: 160 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 219 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11510080 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 11510021 Query: 220 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 279 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11510020 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 11509961 Query: 280 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509960 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 11509901 Query: 340 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 399 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509900 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 11509841 Query: 400 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 459 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509840 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 11509781 Query: 460 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 519 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11509780 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 11509721 Query: 520 ccgcaagg 527 |||||||| Sbjct: 11509720 ccgcaagg 11509713 Score = 511 bits (258), Expect = e-142 Identities = 264/266 (99%) Strand = Plus / Minus Query: 262 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 321 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411986 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 27411927 Query: 322 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 381 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411926 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 27411867 Query: 382 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 441 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411866 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 27411807 Query: 442 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 501 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27411806 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccct 27411747 Query: 502 gaaaacccaaggtttcctccgcaagg 527 |||||||||||||||||||| ||||| Sbjct: 27411746 gaaaacccaaggtttcctccacaagg 27411721 Score = 133 bits (67), Expect = 6e-28 Identities = 73/75 (97%) Strand = Plus / Minus Query: 176 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 235 |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 25813487 atcgtcgagaggaaaacagcccggatcaccagctaaggcccctaaatgaccgcttagtga 25813428 Query: 236 taaaggaggtggggg 250 ||||||||||||||| Sbjct: 25813427 taaaggaggtggggg 25813413 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Plus Query: 179 gtcgagagggaaacagcccggatcaccagctaaggccc 216 |||||||||||||||||||||||||||||||||||||| Sbjct: 28673577 gtcgagagggaaacagcccggatcaccagctaaggccc 28673614 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 78 gcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataa 132 |||| ||||||||||||||| |||||| |||||| || |||||||| |||||||| Sbjct: 36035516 gcgaacggtaccaaatcgagacaaactttgaatattatatatgacctaaaaataa 36035570
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1029 bits (519), Expect = 0.0 Identities = 519/519 (100%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47075 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 47016 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47015 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 46956 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46955 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 46896 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46895 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 46836 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46835 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 46776 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46775 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 46716 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46715 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 46656 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46655 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 46596 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||||||||||||||||| Sbjct: 46595 aatccaatgccccgaaaacccaaggtttcctccgcaagg 46557
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1029 bits (519), Expect = 0.0 Identities = 519/519 (100%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52511 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 52452 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52451 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 52392 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52391 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 52332 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52331 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 52272 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52271 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 52212 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52211 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 52152 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52151 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 52092 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52091 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 52032 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||||||||||||||||| Sbjct: 52031 aatccaatgccccgaaaacccaaggtttcctccgcaagg 51993
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 1029 bits (519), Expect = 0.0 Identities = 519/519 (100%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 435 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 494 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 495 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 554 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 555 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 614 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 615 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 674 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 675 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 734 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 735 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 794 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 795 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 854 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 855 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 914 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||||||||||||||||| Sbjct: 915 aatccaatgccccgaaaacccaaggtttcctccgcaagg 953
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 1029 bits (519), Expect = 0.0 Identities = 519/519 (100%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 630 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 689 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 690 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 749 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 750 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 809 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 810 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 869 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 870 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 929 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 930 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 989 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 990 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 1049 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1050 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 1109 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||||||||||||||||| Sbjct: 1110 aatccaatgccccgaaaacccaaggtttcctccgcaagg 1148
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 1029 bits (519), Expect = 0.0 Identities = 519/519 (100%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 501 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 560 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 561 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 620 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 621 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 680 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 681 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 740 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 741 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 800 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 801 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 860 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 861 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 920 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 921 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 980 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||||||||||||||||| Sbjct: 981 aatccaatgccccgaaaacccaaggtttcctccgcaagg 1019
>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full insert sequence Length = 819 Score = 1029 bits (519), Expect = 0.0 Identities = 519/519 (100%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 251 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 310 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 311 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 370 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 371 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 430 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 431 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 490 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 491 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 550 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 551 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 610 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 611 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 670 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 671 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 730 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||||||||||||||||| Sbjct: 731 aatccaatgccccgaaaacccaaggtttcctccgcaagg 769
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 1029 bits (519), Expect = 0.0 Identities = 519/519 (100%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 630 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 689 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 690 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 749 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 750 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 809 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 810 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 869 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 870 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 929 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 930 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 989 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 990 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 1049 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1050 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 1109 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||||||||||||||||| Sbjct: 1110 aatccaatgccccgaaaacccaaggtttcctccgcaagg 1148
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1029 bits (519), Expect = 0.0 Identities = 519/519 (100%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950244 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 19950303 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950304 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 19950363 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950364 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 19950423 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950424 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 19950483 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950484 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 19950543 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950544 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 19950603 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950604 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 19950663 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19950664 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 19950723 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||||||||||||||||| Sbjct: 19950724 aatccaatgccccgaaaacccaaggtttcctccgcaagg 19950762 Score = 1021 bits (515), Expect = 0.0 Identities = 518/519 (99%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393874 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 10393933 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393934 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 10393993 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393994 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 10394053 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394054 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 10394113 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394114 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 10394173 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394174 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 10394233 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 10394234 gtgggatgtcaaaatgcatcggtaggagagcgttccgccttagagggaagcaaccgcgaa 10394293 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10394294 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 10394353 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||||||||||||||||| Sbjct: 10394354 aatccaatgccccgaaaacccaaggtttcctccgcaagg 10394392 Score = 1021 bits (515), Expect = 0.0 Identities = 518/519 (99%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282502 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 10282443 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282442 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 10282383 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282382 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 10282323 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282322 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 10282263 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282262 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 10282203 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 10282202 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcaatctgccgaagct 10282143 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282142 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 10282083 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282082 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 10282023 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||||||||||||||||| Sbjct: 10282022 aatccaatgccccgaaaacccaaggtttcctccgcaagg 10281984 Score = 77.8 bits (39), Expect = 3e-11 Identities = 39/39 (100%) Strand = Plus / Minus Query: 316 gatcgagcgcccttgcgctgaagatgaacggggctaagc 354 ||||||||||||||||||||||||||||||||||||||| Sbjct: 15841752 gatcgagcgcccttgcgctgaagatgaacggggctaagc 15841714 Score = 54.0 bits (27), Expect = 5e-04 Identities = 85/102 (83%), Gaps = 3/102 (2%) Strand = Plus / Plus Query: 85 gtaccaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaagg 144 ||||||||||||| |||| ||| |||||||||| ||| ||||||||||| ||||||| | Sbjct: 781050 gtaccaaatcgagacaaagtctaaatactagatgtga--caaaaataaca-gggtcaatg 781106 Query: 145 tcggccagtgagacgatgggggataagcttcatcgtcgagag 186 || || ||||||| | ||| ||||| || ||||||||||| Sbjct: 781107 tcagctagtgagatggcgggaaataagttttatcgtcgagag 781148 Score = 48.1 bits (24), Expect = 0.029 Identities = 51/60 (85%) Strand = Plus / Minus Query: 257 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 316 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 2736078 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 2736019
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1029 bits (519), Expect = 0.0 Identities = 519/519 (100%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119043 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 118984 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118983 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 118924 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118923 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 118864 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118863 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 118804 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118803 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 118744 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118743 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 118684 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118683 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 118624 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118623 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 118564 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||||||||||||||||| Sbjct: 118563 aatccaatgccccgaaaacccaaggtttcctccgcaagg 118525 Score = 1029 bits (519), Expect = 0.0 Identities = 519/519 (100%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95996 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 96055 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96056 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 96115 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96116 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 96175 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96176 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 96235 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96236 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 96295 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96296 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 96355 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96356 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 96415 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96416 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 96475 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||||||||||||||||| Sbjct: 96476 aatccaatgccccgaaaacccaaggtttcctccgcaagg 96514
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1029 bits (519), Expect = 0.0 Identities = 519/519 (100%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119235 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 119176 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119175 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 119116 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119115 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 119056 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119055 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 118996 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118995 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 118936 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118935 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 118876 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118875 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 118816 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118815 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 118756 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||||||||||||||||| Sbjct: 118755 aatccaatgccccgaaaacccaaggtttcctccgcaagg 118717 Score = 1029 bits (519), Expect = 0.0 Identities = 519/519 (100%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95659 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 95718 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95719 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 95778 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95779 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 95838 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95839 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 95898 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95899 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 95958 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95959 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 96018 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96019 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 96078 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96079 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 96138 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||||||||||||||||| Sbjct: 96139 aatccaatgccccgaaaacccaaggtttcctccgcaagg 96177
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1021 bits (515), Expect = 0.0 Identities = 518/519 (99%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118016 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 117957 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117956 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 117897 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117896 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 117837 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117836 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 117777 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117776 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 117717 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 117716 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcaatctgccgaagct 117657 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117656 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 117597 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117596 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 117537 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||||||||||||||||| Sbjct: 117536 aatccaatgccccgaaaacccaaggtttcctccgcaagg 117498
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1021 bits (515), Expect = 0.0 Identities = 518/519 (99%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94227 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 94286 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94287 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 94346 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94347 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 94406 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94407 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 94466 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94467 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 94526 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94527 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 94586 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 94587 gtgggatgtcaaaatgcatcggtaggagagcgttccgccttagagggaagcaaccgcgaa 94646 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94647 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 94706 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||||||||||||||||| Sbjct: 94707 aatccaatgccccgaaaacccaaggtttcctccgcaagg 94745
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1021 bits (515), Expect = 0.0 Identities = 518/519 (99%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44059 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 44000 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43999 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 43940 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43939 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 43880 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43879 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 43820 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43819 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 43760 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43759 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 43700 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 43699 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaa 43640 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43639 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 43580 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||||||||||||||||| Sbjct: 43579 aatccaatgccccgaaaacccaaggtttcctccgcaagg 43541 Score = 1021 bits (515), Expect = 0.0 Identities = 518/519 (99%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21058 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 21117 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21118 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 21177 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21178 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 21237 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21238 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 21297 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21298 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 21357 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21358 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 21417 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 21418 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaa 21477 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21478 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 21537 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||||||||||||||||| Sbjct: 21538 aatccaatgccccgaaaacccaaggtttcctccgcaagg 21576
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1021 bits (515), Expect = 0.0 Identities = 518/519 (99%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57788 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 57729 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57728 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 57669 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57668 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 57609 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57608 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 57549 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57548 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 57489 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 57488 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcaatctgccgaagct 57429 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57428 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 57369 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 57368 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 57309 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||||||||||||||||| Sbjct: 57308 aatccaatgccccgaaaacccaaggtttcctccgcaagg 57270
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 1021 bits (515), Expect = 0.0 Identities = 518/519 (99%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 689 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 630 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 629 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 570 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 569 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 510 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 509 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 450 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 449 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 390 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 389 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 330 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 329 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaa 270 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 210 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||||||||||||||||| Sbjct: 209 aatccaatgccccgaaaacccaaggtttcctccgcaagg 171
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1021 bits (515), Expect = 0.0 Identities = 518/519 (99%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28291 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 28350 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28351 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 28410 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28411 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 28470 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28471 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 28530 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28531 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 28590 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28591 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 28650 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 28651 gtgggatgtcaaaatgcatcggtaggagagcgttccgccttagagggaagcaaccgcgaa 28710 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28711 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 28770 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||||||||||||||||| Sbjct: 28771 aatccaatgccccgaaaacccaaggtttcctccgcaagg 28809
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1021 bits (515), Expect = 0.0 Identities = 518/519 (99%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122899 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 122840 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122839 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 122780 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122779 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 122720 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122719 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 122660 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122659 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 122600 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122599 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 122540 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 122539 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaa 122480 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122479 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 122420 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||||||||||||||||| Sbjct: 122419 aatccaatgccccgaaaacccaaggtttcctccgcaagg 122381 Score = 1021 bits (515), Expect = 0.0 Identities = 518/519 (99%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99938 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 99997 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99998 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 100057 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100058 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 100117 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100118 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 100177 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100178 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 100237 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100238 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 100297 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 100298 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaa 100357 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100358 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 100417 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||||||||||||||||| Sbjct: 100418 aatccaatgccccgaaaacccaaggtttcctccgcaagg 100456
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 1021 bits (515), Expect = 0.0 Identities = 518/519 (99%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 629 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 688 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 689 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 748 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 749 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 808 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 809 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgatagaggaggtggg 868 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 869 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 928 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 929 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 988 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 989 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 1048 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1049 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 1108 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||||||||||||||||| Sbjct: 1109 aatccaatgccccgaaaacccaaggtttcctccgcaagg 1147
>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full insert sequence Length = 1310 Score = 1021 bits (515), Expect = 0.0 Identities = 518/519 (99%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 253 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 312 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 313 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 372 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 373 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 432 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 433 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 492 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 493 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 552 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 553 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 612 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 613 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 672 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 673 agcgggggttgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 732 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||||||||||||||||| Sbjct: 733 aatccaatgccccgaaaacccaaggtttcctccgcaagg 771
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1021 bits (515), Expect = 0.0 Identities = 518/519 (99%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123616 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 123557 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123556 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 123497 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123496 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 123437 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123436 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 123377 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123376 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 123317 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123316 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 123257 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 123256 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaa 123197 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123196 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 123137 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||||||||||||||||| Sbjct: 123136 aatccaatgccccgaaaacccaaggtttcctccgcaagg 123098 Score = 1021 bits (515), Expect = 0.0 Identities = 518/519 (99%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100615 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 100674 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100675 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 100734 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100735 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 100794 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100795 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 100854 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100855 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 100914 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100915 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 100974 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 100975 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaa 101034 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101035 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 101094 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||||||||||||||||| Sbjct: 101095 aatccaatgccccgaaaacccaaggtttcctccgcaagg 101133
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 983 bits (496), Expect = 0.0 Identities = 496/496 (100%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526466 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 33526525 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526526 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 33526585 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526586 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 33526645 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526646 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 33526705 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526706 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 33526765 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526766 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 33526825 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526826 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 33526885 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526886 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 33526945 Query: 489 aatccaatgccccgaa 504 |||||||||||||||| Sbjct: 33526946 aatccaatgccccgaa 33526961 Score = 355 bits (179), Expect = 9e-95 Identities = 206/215 (95%), Gaps = 5/215 (2%) Strand = Plus / Plus Query: 169 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 228 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 527751 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 527810 Query: 229 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 288 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 527811 tcagtgataaaggaggtgggggtgcaaagac-----ggaggtttgcctaaaagcagccac 527865 Query: 289 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 527866 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 527925 Query: 349 ctaagcgatctgccgaagctgtgggatgtcaaaat 383 |||||||||||||| |||||||||||||||||||| Sbjct: 527926 ctaagcgatctgccaaagctgtgggatgtcaaaat 527960 Score = 125 bits (63), Expect = 2e-25 Identities = 122/139 (87%), Gaps = 2/139 (1%) Strand = Plus / Minus Query: 389 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 448 |||||||||| ||||| |||||||||||||| ||| | |||| ||| |||| ||||||| Sbjct: 1076778 ggtaggggagtgttccaccttagagggaagccaccacaaaagtaggg-tcgatgaagcgg 1076720 Query: 449 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 508 | | ||||||||| ||||||||||| ||||||| ||| ||||||||||||| |||||||| Sbjct: 1076719 atgtgagaatgtctgcttgagtaac-aaaacatcggtaagaatccaatgcctcgaaaacc 1076661 Query: 509 caaggtttcctccgcaagg 527 || |||||||||||||||| Sbjct: 1076660 cagggtttcctccgcaagg 1076642 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 316 gatcgagcgcccttgcgctgaagatgaacggggctaagcgat 357 |||||||| |||||||||||||||||||| |||||||||||| Sbjct: 9371952 gatcgagcacccttgcgctgaagatgaacagggctaagcgat 9371911 Score = 58.0 bits (29), Expect = 3e-05 Identities = 75/89 (84%), Gaps = 1/89 (1%) Strand = Plus / Minus Query: 385 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 444 ||||||| || ||| |||| |||||| | |||||||||||| ||||| |||||||| || Sbjct: 1076893 catcggttggtgagtgttctgccttaaaaggaagcaaccgcaaaagc-agggtcgacaaa 1076835 Query: 445 gcggaagcgagaatgtcggcttgagtaac 473 | ||||| |||||||| |||| ||||||| Sbjct: 1076834 gtggaagtgagaatgttggctggagtaac 1076806 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 465 ttgagtaacgaaaacattggtgagaatc 492 |||||||||||||||||||||||||||| Sbjct: 33498173 ttgagtaacgaaaacattggtgagaatc 33498146
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 983 bits (496), Expect = 0.0 Identities = 496/496 (100%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71663 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 71722 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71723 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 71782 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71783 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 71842 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71843 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 71902 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71903 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 71962 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71963 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 72022 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 72023 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 72082 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 72083 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 72142 Query: 489 aatccaatgccccgaa 504 |||||||||||||||| Sbjct: 72143 aatccaatgccccgaa 72158 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 465 ttgagtaacgaaaacattggtgagaatc 492 |||||||||||||||||||||||||||| Sbjct: 43370 ttgagtaacgaaaacattggtgagaatc 43343
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 957 bits (483), Expect = 0.0 Identities = 512/519 (98%), Gaps = 2/519 (0%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122839 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 122780 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122779 gcgg-ctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 122721 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122720 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 122661 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 122660 aaacagcccggatcaccagctaaggccccttaatgaccgctcagtgataaaggaggtggg 122601 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122600 ggtgcaaagacagccatgaggtttgcctagaagcagccaccctttaaagagtgcgtaata 122541 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122540 gctcactga-ctggcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 122482 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 122481 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaa 122422 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122421 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 122362 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||||||||||||||||| Sbjct: 122361 aatccaatgccccgaaaacccaaggtttcctccgcaagg 122323 Score = 957 bits (483), Expect = 0.0 Identities = 512/519 (98%), Gaps = 2/519 (0%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99898 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 99957 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99958 gcgg-ctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 100016 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100017 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 100076 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 100077 aaacagcccggatcaccagctaaggccccttaatgaccgctcagtgataaaggaggtggg 100136 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100137 ggtgcaaagacagccatgaggtttgcctagaagcagccaccctttaaagagtgcgtaata 100196 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100197 gctcactga-ctggcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 100255 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 100256 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaa 100315 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100316 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 100375 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||||||||||||||||| Sbjct: 100376 aatccaatgccccgaaaacccaaggtttcctccgcaagg 100414
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 957 bits (483), Expect = 0.0 Identities = 512/519 (98%), Gaps = 2/519 (0%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6251 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 6310 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6311 gcgg-ctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 6369 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6370 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 6429 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 6430 aaacagcccggatcaccagctaaggccccttaatgaccgctcagtgataaaggaggtggg 6489 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6490 ggtgcaaagacagccatgaggtttgcctagaagcagccaccctttaaagagtgcgtaata 6549 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6550 gctcactga-ctggcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 6608 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 6609 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaa 6668 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6669 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 6728 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||||||||||||||||| Sbjct: 6729 aatccaatgccccgaaaacccaaggtttcctccgcaagg 6767
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 957 bits (483), Expect = 0.0 Identities = 512/519 (98%), Gaps = 2/519 (0%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 839 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 898 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 899 gcgg-ctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 957 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 958 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 1017 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1018 aaacagcccggatcaccagctaaggccccttaatgaccgctcagtgataaaggaggtggg 1077 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1078 ggtgcaaagacagccatgaggtttgcctagaagcagccaccctttaaagagtgcgtaata 1137 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1138 gctcactga-ctggcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 1196 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1197 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaacgcgaa 1256 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1257 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 1316 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||||||||||||||||| Sbjct: 1317 aatccaatgccccgaaaacccaaggtttcctccgcaagg 1355
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 948 bits (478), Expect = 0.0 Identities = 478/478 (100%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 632 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 691 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 692 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 751 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 752 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 811 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 812 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 871 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 872 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 931 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 932 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 991 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 992 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 1051 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtg 486 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1052 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtg 1109
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 886 bits (447), Expect = 0.0 Identities = 501/519 (96%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 826 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 885 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 886 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 945 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 946 ataactggggtcaaggtcggccagtgagacggtgggggataagcttcatcgtcgagaggg 1005 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1006 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 1065 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1066 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 1125 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1126 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 1185 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1186 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagggggaagcaaccgcgcg 1245 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 ||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1246 agcggcggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgag 1305 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||| ||||||||||||| Sbjct: 1306 aatccaatgccccgaaaacccaagggttcctccgcaagg 1344
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 886 bits (447), Expect = 0.0 Identities = 501/519 (96%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132171 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 132112 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 132111 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 132052 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 132051 ataactggggtcaaggtcggccagtgagacggtgggggataagcttcatcgtcgagaggg 131992 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 131991 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 131932 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 131931 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 131872 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 131871 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 131812 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 131811 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagggggaagcaaccgcgcg 131752 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 ||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 131751 agcggcggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgag 131692 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||| ||||||||||||| Sbjct: 131691 aatccaatgccccgaaaacccaagggttcctccgcaagg 131653 Score = 886 bits (447), Expect = 0.0 Identities = 501/519 (96%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104593 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 104652 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 104653 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 104712 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 104713 ataactggggtcaaggtcggccagtgagacggtgggggataagcttcatcgtcgagaggg 104772 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 104773 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 104832 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 104833 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 104892 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 104893 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 104952 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 104953 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagggggaagcaaccgcgcg 105012 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 ||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 105013 agcggcggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgag 105072 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||| ||||||||||||| Sbjct: 105073 aatccaatgccccgaaaacccaagggttcctccgcaagg 105111
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 886 bits (447), Expect = 0.0 Identities = 501/519 (96%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133132 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 133073 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 133072 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 133013 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 133012 ataactggggtcaaggtcggccagtgagacggtgggggataagcttcatcgtcgagaggg 132953 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 132952 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 132893 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 132892 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 132833 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 132832 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 132773 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 132772 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagggggaagcaaccgcgcg 132713 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 ||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 132712 agcggcggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgag 132653 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||| ||||||||||||| Sbjct: 132652 aatccaatgccccgaaaacccaagggttcctccgcaagg 132614 Score = 886 bits (447), Expect = 0.0 Identities = 501/519 (96%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105517 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 105576 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 105577 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 105636 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 105637 ataactggggtcaaggtcggccagtgagacggtgggggataagcttcatcgtcgagaggg 105696 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 105697 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 105756 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 105757 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 105816 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 105817 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 105876 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 105877 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagggggaagcaaccgcgcg 105936 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 ||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 105937 agcggcggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgag 105996 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||| ||||||||||||| Sbjct: 105997 aatccaatgccccgaaaacccaagggttcctccgcaagg 106035
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 878 bits (443), Expect = 0.0 Identities = 500/519 (96%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138677 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 138618 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 138617 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 138558 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138557 ataacaggggtcgaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 138498 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 138497 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 138438 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 138437 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 138378 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 138377 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 138318 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 138317 gtgggatgtaaaaatgcatcggtaggggagcgttccgccttagggggaagcacccgcgtg 138258 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 |||||| || |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 138257 agcgggagtagacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgag 138198 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||| ||||||||||||| Sbjct: 138197 aatccaatgccccgaaaacccaagggttcctccgcaagg 138159 Score = 878 bits (443), Expect = 0.0 Identities = 500/519 (96%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110420 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 110479 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 110480 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 110539 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110540 ataacaggggtcgaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 110599 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 110600 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 110659 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 110660 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 110719 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 110720 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 110779 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct: 110780 gtgggatgtaaaaatgcatcggtaggggagcgttccgccttagggggaagcacccgcgtg 110839 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 |||||| || |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 110840 agcgggagtagacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgag 110899 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||| ||||||||||||| Sbjct: 110900 aatccaatgccccgaaaacccaagggttcctccgcaagg 110938
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 870 bits (439), Expect = 0.0 Identities = 499/519 (96%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141280 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 141221 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 141220 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgaccccaaa 141161 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141160 ataacaggggtaaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 141101 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 141100 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 141041 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 141040 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 140981 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 140980 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 140921 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||| Sbjct: 140920 gtgggatgtaaaaatgcatcggtaggggagcgttccgccttagagtgaagcacccgcgcg 140861 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 ||| || || |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 140860 agcaggtgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgag 140801 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 |||||||||||||||||||| |||| ||||||||||||| Sbjct: 140800 aatccaatgccccgaaaacctaagggttcctccgcaagg 140762 Score = 870 bits (439), Expect = 0.0 Identities = 499/519 (96%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112377 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 112436 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 112437 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgaccccaaa 112496 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 112497 ataacaggggtaaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 112556 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 112557 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 112616 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 112617 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 112676 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 112677 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 112736 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||| Sbjct: 112737 gtgggatgtaaaaatgcatcggtaggggagcgttccgccttagagtgaagcacccgcgcg 112796 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 ||| || || |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 112797 agcaggtgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgag 112856 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 |||||||||||||||||||| |||| ||||||||||||| Sbjct: 112857 aatccaatgccccgaaaacctaagggttcctccgcaagg 112895
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 870 bits (439), Expect = 0.0 Identities = 499/519 (96%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138882 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 138823 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 138822 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctccaa 138763 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138762 ataataggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 138703 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 138702 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 138643 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 138642 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 138583 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 138582 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 138523 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||| ||||| |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 138522 gtgggatgtaaaaatacatcggtaggggagcgttccgccttagagggaagcacccgcgag 138463 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 ||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 138462 agcaggggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgag 138403 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 |||||||||||||||||||| |||| ||||||||||||| Sbjct: 138402 aatccaatgccccgaaaacctaagggttcctccgcaagg 138364 Score = 870 bits (439), Expect = 0.0 Identities = 499/519 (96%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110417 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 110476 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 110477 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctccaa 110536 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110537 ataataggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 110596 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 110597 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 110656 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 110657 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 110716 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 110717 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 110776 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||| ||||| |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 110777 gtgggatgtaaaaatacatcggtaggggagcgttccgccttagagggaagcacccgcgag 110836 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 ||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 110837 agcaggggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgag 110896 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 |||||||||||||||||||| |||| ||||||||||||| Sbjct: 110897 aatccaatgccccgaaaacctaagggttcctccgcaagg 110935
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 868 bits (438), Expect = 0.0 Identities = 499/519 (96%), Gaps = 4/519 (0%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127036 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 126977 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 126976 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgaccccaaa 126917 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 126916 ----caggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 126861 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 126860 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 126801 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 126800 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 126741 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 126740 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 126681 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 126680 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcacccgcgca 126621 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 ||| || || |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 126620 agcaggtgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgag 126561 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 |||||||||||||||||||| |||| ||||||||||||| Sbjct: 126560 aatccaatgccccgaaaacctaagggttcctccgcaagg 126522 Score = 868 bits (438), Expect = 0.0 Identities = 499/519 (96%), Gaps = 4/519 (0%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107886 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 107945 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 107946 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgaccccaaa 108005 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108006 ----caggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 108061 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 108062 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 108121 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 108122 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 108181 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 108182 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 108241 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 108242 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcacccgcgca 108301 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 ||| || || |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 108302 agcaggtgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgag 108361 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 |||||||||||||||||||| |||| ||||||||||||| Sbjct: 108362 aatccaatgccccgaaaacctaagggttcctccgcaagg 108400
>gb|DQ078770.1| Zea mays clone Zmcoi6.13 cold-inducible unknown mRNA Length = 519 Score = 866 bits (437), Expect = 0.0 Identities = 440/441 (99%) Strand = Plus / Minus Query: 87 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 519 accaaatcgaggcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtc 460 Query: 147 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 459 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 400 Query: 207 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 399 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 340 Query: 267 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 339 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 280 Query: 327 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgca 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 279 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgca 220 Query: 387 tcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagc 446 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 219 tcggtaggggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagc 160 Query: 447 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 159 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 100 Query: 507 cccaaggtttcctccgcaagg 527 ||||||||||||||||||||| Sbjct: 99 cccaaggtttcctccgcaagg 79
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 862 bits (435), Expect = 0.0 Identities = 498/519 (95%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130840 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 130781 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 130780 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 130721 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130720 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 130661 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 130660 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 130601 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 130600 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 130541 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 130540 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 130481 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||| ||||| ||||||||||||||||||||||||||||| |||||| ||||| Sbjct: 130480 gtgggatgtaaaaatacatcggtaggggagcgttccgccttagagtgaagcacccgcgcg 130421 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 ||||| || |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 130420 agcggtagtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgag 130361 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 |||||||||||||||||||| |||| ||||||||||||| Sbjct: 130360 aatccaatgccccgaaaacctaagggttcctccgcaagg 130322 Score = 862 bits (435), Expect = 0.0 Identities = 498/519 (95%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103795 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 103854 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 103855 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 103914 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103915 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 103974 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 103975 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 104034 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 104035 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 104094 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 104095 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 104154 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||| ||||| ||||||||||||||||||||||||||||| |||||| ||||| Sbjct: 104155 gtgggatgtaaaaatacatcggtaggggagcgttccgccttagagtgaagcacccgcgcg 104214 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 ||||| || |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 104215 agcggtagtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgag 104274 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 |||||||||||||||||||| |||| ||||||||||||| Sbjct: 104275 aatccaatgccccgaaaacctaagggttcctccgcaagg 104313
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 854 bits (431), Expect = 0.0 Identities = 497/519 (95%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131948 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 131889 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 131888 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 131829 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131828 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 131769 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 131768 aaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtagg 131709 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 131708 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 131649 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 131648 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 131589 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||| ||||| ||||||||||||||||||||||||||||| |||||| ||||| Sbjct: 131588 gtgggatgtaaaaatacatcggtaggggagcgttccgccttagagtgaagcacccgcgcg 131529 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 ||||| || |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 131528 agcggtagtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgag 131469 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 |||||||||||||||||||| |||| ||||||||||||| Sbjct: 131468 aatccaatgccccgaaaacctaagggttcctccgcaagg 131430 Score = 854 bits (431), Expect = 0.0 Identities = 497/519 (95%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104930 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 104989 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 104990 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 105049 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105050 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 105109 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 105110 aaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtagg 105169 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 105170 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 105229 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 105230 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 105289 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||| ||||| ||||||||||||||||||||||||||||| |||||| ||||| Sbjct: 105290 gtgggatgtaaaaatacatcggtaggggagcgttccgccttagagtgaagcacccgcgcg 105349 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 ||||| || |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 105350 agcggtagtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgag 105409 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 |||||||||||||||||||| |||| ||||||||||||| Sbjct: 105410 aatccaatgccccgaaaacctaagggttcctccgcaagg 105448
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 854 bits (431), Expect = 0.0 Identities = 497/519 (95%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135074 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 135015 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||||||| | ||| Sbjct: 135014 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgatctcaaa 134955 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134954 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 134895 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 134894 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 134835 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 134834 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 134775 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 134774 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 134715 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||| |||||||||||||||||||||||||||||||||||||||||| | ||| Sbjct: 134714 gtgggatgtaaaaatgcatcggtaggggagcgttccgccttagagggaagcacctgcgcg 134655 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 ||| | || |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 134654 agcagttgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgag 134595 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 |||||||||||||||||||| |||| ||||||||||||| Sbjct: 134594 aatccaatgccccgaaaacctaagggttcctccgcaagg 134556 Score = 854 bits (431), Expect = 0.0 Identities = 497/519 (95%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106832 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 106891 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||||||| | ||| Sbjct: 106892 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgatctcaaa 106951 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106952 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 107011 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 107012 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 107071 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 107072 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 107131 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 107132 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 107191 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||| |||||||||||||||||||||||||||||||||||||||||| | ||| Sbjct: 107192 gtgggatgtaaaaatgcatcggtaggggagcgttccgccttagagggaagcacctgcgcg 107251 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 ||| | || |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 107252 agcagttgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgag 107311 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 |||||||||||||||||||| |||| ||||||||||||| Sbjct: 107312 aatccaatgccccgaaaacctaagggttcctccgcaagg 107350
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 854 bits (431), Expect = 0.0 Identities = 497/519 (95%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135765 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 135706 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 135705 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 135646 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 135645 ataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagaggg 135586 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 135585 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 135526 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 135525 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 135466 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 135465 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 135406 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||| ||||| |||||||||||||||||||||||||||||||||| | ||||| Sbjct: 135405 gtgggatgtaaaaatacatcggtaggggagcgttccgccttagagggaagtacccgcgcg 135346 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 ||||| || |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 135345 agcggtagtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgag 135286 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 |||||||||||||||||||| |||| ||||||||||||| Sbjct: 135285 aatccaatgccccgaaaacctaagggttcctccgcaagg 135247 Score = 854 bits (431), Expect = 0.0 Identities = 497/519 (95%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106660 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 106719 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 106720 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 106779 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 106780 ataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagaggg 106839 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 106840 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 106899 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 106900 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 106959 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 106960 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 107019 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||| ||||| |||||||||||||||||||||||||||||||||| | ||||| Sbjct: 107020 gtgggatgtaaaaatacatcggtaggggagcgttccgccttagagggaagtacccgcgcg 107079 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 ||||| || |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 107080 agcggtagtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgag 107139 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 |||||||||||||||||||| |||| ||||||||||||| Sbjct: 107140 aatccaatgccccgaaaacctaagggttcctccgcaagg 107178
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 854 bits (431), Expect = 0.0 Identities = 497/519 (95%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135353 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 135294 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||||||| | ||| Sbjct: 135293 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgatctcaaa 135234 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135233 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 135174 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 135173 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 135114 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 135113 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 135054 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 135053 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 134994 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||| |||||||||||||||||||||||||||||||||||||||||| | ||| Sbjct: 134993 gtgggatgtaaaaatgcatcggtaggggagcgttccgccttagagggaagcacctgcgcg 134934 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 ||| | || |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 134933 agcagttgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgag 134874 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 |||||||||||||||||||| |||| ||||||||||||| Sbjct: 134873 aatccaatgccccgaaaacctaagggttcctccgcaagg 134835 Score = 854 bits (431), Expect = 0.0 Identities = 497/519 (95%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107054 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 107113 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||||||| | ||| Sbjct: 107114 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgatctcaaa 107173 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107174 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 107233 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 107234 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 107293 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 107294 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 107353 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 107354 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 107413 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||| |||||||||||||||||||||||||||||||||||||||||| | ||| Sbjct: 107414 gtgggatgtaaaaatgcatcggtaggggagcgttccgccttagagggaagcacctgcgcg 107473 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 ||| | || |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 107474 agcagttgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgag 107533 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 |||||||||||||||||||| |||| ||||||||||||| Sbjct: 107534 aatccaatgccccgaaaacctaagggttcctccgcaagg 107572
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 854 bits (431), Expect = 0.0 Identities = 498/519 (95%), Gaps = 1/519 (0%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 133395 ccgaaatgcgttgaggcgcagcagttgactagacatctaggggtaaagcactgtttcggt 133336 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133335 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 133276 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 || |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133275 atcacaggg-tcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 133217 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 133216 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 133157 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||| Sbjct: 133156 ggtgcagagacagccaggaggtttgcctagaagccgccacccttgaaagagtgcgtaata 133097 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 133096 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 133037 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||| | Sbjct: 133036 gtgggatgtaaaaatgcatcggtaggggagcgttccgccttagagagaagcacccgcgca 132977 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 ||| || || |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 132976 agcaggtgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgag 132917 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 |||||||||||||||||||| |||| ||||||||||||| Sbjct: 132916 aatccaatgccccgaaaacctaagggttcctccgcaagg 132878 Score = 854 bits (431), Expect = 0.0 Identities = 498/519 (95%), Gaps = 1/519 (0%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 104576 ccgaaatgcgttgaggcgcagcagttgactagacatctaggggtaaagcactgtttcggt 104635 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104636 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 104695 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 || |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104696 atcacaggg-tcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 104754 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 104755 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 104814 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||| Sbjct: 104815 ggtgcagagacagccaggaggtttgcctagaagccgccacccttgaaagagtgcgtaata 104874 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 104875 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 104934 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||| | Sbjct: 104935 gtgggatgtaaaaatgcatcggtaggggagcgttccgccttagagagaagcacccgcgca 104994 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 ||| || || |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 104995 agcaggtgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgag 105054 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 |||||||||||||||||||| |||| ||||||||||||| Sbjct: 105055 aatccaatgccccgaaaacctaagggttcctccgcaagg 105093
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 854 bits (431), Expect = 0.0 Identities = 497/519 (95%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131941 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 131882 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 131881 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 131822 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131821 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 131762 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 131761 aaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtagg 131702 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 131701 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 131642 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 131641 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 131582 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||| ||||| ||||||||||||||||||||||||||||| |||||| ||||| Sbjct: 131581 gtgggatgtaaaaatacatcggtaggggagcgttccgccttagagtgaagcacccgcgcg 131522 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 ||||| || |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 131521 agcggtagtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgag 131462 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 |||||||||||||||||||| |||| ||||||||||||| Sbjct: 131461 aatccaatgccccgaaaacctaagggttcctccgcaagg 131423 Score = 854 bits (431), Expect = 0.0 Identities = 497/519 (95%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104928 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 104987 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 104988 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 105047 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105048 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 105107 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 105108 aaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtagg 105167 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 105168 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 105227 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 105228 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 105287 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||| ||||| ||||||||||||||||||||||||||||| |||||| ||||| Sbjct: 105288 gtgggatgtaaaaatacatcggtaggggagcgttccgccttagagtgaagcacccgcgcg 105347 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 ||||| || |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 105348 agcggtagtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgag 105407 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 |||||||||||||||||||| |||| ||||||||||||| Sbjct: 105408 aatccaatgccccgaaaacctaagggttcctccgcaagg 105446
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 854 bits (431), Expect = 0.0 Identities = 497/519 (95%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 828 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 887 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 888 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 947 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 948 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 1007 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1008 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 1067 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1068 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 1127 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1128 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 1187 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||| |||| |||||||||||||||||||||||||||| |||||||| | ||| Sbjct: 1188 gtgggatgtaaaaaggcatcggtaggggagcgttccgccttagggggaagcacctgcgcg 1247 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 ||| | ||| |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1248 agcagcggtagacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgag 1307 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 |||||||||||||||||||| |||| ||||||||||||| Sbjct: 1308 aatccaatgccccgaaaacctaagggttcctccgcaagg 1346
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 848 bits (428), Expect = 0.0 Identities = 500/524 (95%), Gaps = 5/524 (0%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138758 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 138699 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc---- 124 |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138698 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgaccccaaa 138639 Query: 125 -aaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcga 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138638 acaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcga 138579 Query: 184 gagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138578 gagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggag 138519 Query: 244 gtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcg 303 || |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 138518 gtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcg 138459 Query: 304 taatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccg 363 |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 138458 taatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccg 138399 Query: 364 aagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaacc 423 |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 138398 aagctgtgggatgtaaaaatgcatcggtaggggagcgttccgccttagagtgaagcaccc 138339 Query: 424 gcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattg 483 ||| ||| || || |||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 138338 gcgcgagcaggtgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattg 138279 Query: 484 gtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 138278 gtgagaatccaatgccccgaaaacctaagggttcctccgcaagg 138235 Score = 848 bits (428), Expect = 0.0 Identities = 500/524 (95%), Gaps = 5/524 (0%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111187 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 111246 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc---- 124 |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111247 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgaccccaaa 111306 Query: 125 -aaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcga 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111307 acaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcga 111366 Query: 184 gagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggag 243 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111367 gagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggag 111426 Query: 244 gtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcg 303 || |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 111427 gtaggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcg 111486 Query: 304 taatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccg 363 |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 111487 taatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccg 111546 Query: 364 aagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaacc 423 |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 111547 aagctgtgggatgtaaaaatgcatcggtaggggagcgttccgccttagagtgaagcaccc 111606 Query: 424 gcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattg 483 ||| ||| || || |||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 111607 gcgcgagcaggtgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattg 111666 Query: 484 gtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 111667 gtgagaatccaatgccccgaaaacctaagggttcctccgcaagg 111710
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 846 bits (427), Expect = 0.0 Identities = 496/519 (95%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135473 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 135414 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 135413 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 135354 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 135353 ataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagaggg 135294 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 135293 aaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtagg 135234 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 135233 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 135174 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 135173 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 135114 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||| ||||| ||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 135113 gtgggatgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcg 135054 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 ||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 135053 agcggtggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgag 134994 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 |||||||||||||||||||| |||| ||||||||||||| Sbjct: 134993 aatccaatgccccgaaaacctaagggttcctccgcaagg 134955 Score = 846 bits (427), Expect = 0.0 Identities = 496/519 (95%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107157 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 107216 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 107217 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 107276 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 107277 ataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagaggg 107336 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 107337 aaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtagg 107396 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 107397 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 107456 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 107457 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 107516 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||| ||||| ||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 107517 gtgggatgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcg 107576 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 ||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 107577 agcggtggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgag 107636 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 |||||||||||||||||||| |||| ||||||||||||| Sbjct: 107637 aatccaatgccccgaaaacctaagggttcctccgcaagg 107675
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 846 bits (427), Expect = 0.0 Identities = 496/519 (95%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136111 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 136052 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 136051 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 135992 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 135991 ataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagaggg 135932 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 135931 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 135872 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 135871 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 135812 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 135811 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 135752 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||| ||||| |||||||||||||||||||||||||| || ||||| ||||| Sbjct: 135751 gtgggatgtaaaaatacatcggtaggggagcgttccgccttatagagaagcctccgcgcg 135692 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 ||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 135691 agcggtggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgag 135632 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 |||||||||||||||||||| |||| ||||||||||||| Sbjct: 135631 aatccaatgccccgaaaacctaagggttcctccgcaagg 135593 Score = 846 bits (427), Expect = 0.0 Identities = 496/519 (95%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107446 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 107505 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 107506 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 107565 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 107566 ataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagaggg 107625 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 107626 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 107685 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 107686 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 107745 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 107746 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 107805 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||| ||||| |||||||||||||||||||||||||| || ||||| ||||| Sbjct: 107806 gtgggatgtaaaaatacatcggtaggggagcgttccgccttatagagaagcctccgcgcg 107865 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 ||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 107866 agcggtggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgag 107925 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 |||||||||||||||||||| |||| ||||||||||||| Sbjct: 107926 aatccaatgccccgaaaacctaagggttcctccgcaagg 107964
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 846 bits (427), Expect = 0.0 Identities = 496/519 (95%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142052 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 141993 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 141992 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 141933 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct: 141932 ataacaggggtcaaggtcggctagtgagacgatgggggataagcttgatcgtcgagaggg 141873 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 141872 aaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtagg 141813 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 141812 ggtgcaaagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 141753 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 141752 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 141693 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||| ||||| ||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 141692 gtgggatgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcg 141633 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 ||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 141632 agcggtggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgag 141573 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 |||||||||||||||||||| |||| ||||||||||||| Sbjct: 141572 aatccaatgccccgaaaacctaagggttcctccgcaagg 141534 Score = 846 bits (427), Expect = 0.0 Identities = 496/519 (95%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111276 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 111335 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 111336 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 111395 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct: 111396 ataacaggggtcaaggtcggctagtgagacgatgggggataagcttgatcgtcgagaggg 111455 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 111456 aaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtagg 111515 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 111516 ggtgcaaagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 111575 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 111576 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 111635 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||| ||||| ||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 111636 gtgggatgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcg 111695 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 ||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 111696 agcggtggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgag 111755 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 |||||||||||||||||||| |||| ||||||||||||| Sbjct: 111756 aatccaatgccccgaaaacctaagggttcctccgcaagg 111794
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 846 bits (427), Expect = 0.0 Identities = 496/519 (95%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2351 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 2410 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 2411 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 2470 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 2471 ataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagaggg 2530 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 2531 aaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtagg 2590 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 2591 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 2650 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 2651 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 2710 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||| ||||| ||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 2711 gtgggatgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcg 2770 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 ||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 2771 agcggtggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgag 2830 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 |||||||||||||||||||| |||| ||||||||||||| Sbjct: 2831 aatccaatgccccgaaaacctaagggttcctccgcaagg 2869
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 846 bits (427), Expect = 0.0 Identities = 496/519 (95%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134719 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 134660 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 134659 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 134600 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 134599 ataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagaggg 134540 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 134539 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 134480 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 134479 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 134420 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||| Sbjct: 134419 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccgaagct 134360 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||| ||||| ||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 134359 gtgggatgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcg 134300 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 ||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 134299 agcggtggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgag 134240 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 |||||||||||||||||||| |||| ||||||||||||| Sbjct: 134239 aatccaatgccccgaaaacctaagggttcctccgcaagg 134201 Score = 846 bits (427), Expect = 0.0 Identities = 496/519 (95%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106317 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 106376 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 106377 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 106436 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 106437 ataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagaggg 106496 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 106497 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 106556 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 106557 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 106616 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||| Sbjct: 106617 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccgaagct 106676 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||| ||||| ||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 106677 gtgggatgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcg 106736 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 ||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 106737 agcggtggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgag 106796 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 |||||||||||||||||||| |||| ||||||||||||| Sbjct: 106797 aatccaatgccccgaaaacctaagggttcctccgcaagg 106835
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 846 bits (427), Expect = 0.0 Identities = 496/519 (95%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134854 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 134795 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 134794 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 134735 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 134734 ataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagaggg 134675 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 134674 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 134615 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 134614 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 134555 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||| Sbjct: 134554 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccgaagct 134495 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||| ||||| ||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 134494 gtgggatgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcg 134435 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 ||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 134434 agcggtggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgag 134375 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 |||||||||||||||||||| |||| ||||||||||||| Sbjct: 134374 aatccaatgccccgaaaacctaagggttcctccgcaagg 134336 Score = 846 bits (427), Expect = 0.0 Identities = 496/519 (95%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106489 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 106548 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 106549 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 106608 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 106609 ataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagaggg 106668 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 106669 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 106728 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 106729 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 106788 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||| Sbjct: 106789 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccgaagct 106848 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||| ||||| ||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 106849 gtgggatgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcg 106908 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 ||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 106909 agcggtggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgag 106968 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 |||||||||||||||||||| |||| ||||||||||||| Sbjct: 106969 aatccaatgccccgaaaacctaagggttcctccgcaagg 107007
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 846 bits (427), Expect = 0.0 Identities = 496/519 (95%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134852 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 134793 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 134792 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 134733 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 134732 ataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagaggg 134673 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 134672 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 134613 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 134612 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 134553 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||| Sbjct: 134552 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccgaagct 134493 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||| ||||| ||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 134492 gtgggatgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcg 134433 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 ||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 134432 agcggtggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgag 134373 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 |||||||||||||||||||| |||| ||||||||||||| Sbjct: 134372 aatccaatgccccgaaaacctaagggttcctccgcaagg 134334 Score = 846 bits (427), Expect = 0.0 Identities = 496/519 (95%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106486 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 106545 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 106546 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 106605 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 106606 ataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagaggg 106665 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 106666 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 106725 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 106726 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 106785 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||| Sbjct: 106786 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccgaagct 106845 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||| ||||| ||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 106846 gtgggatgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcg 106905 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 ||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 106906 agcggtggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgag 106965 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 |||||||||||||||||||| |||| ||||||||||||| Sbjct: 106966 aatccaatgccccgaaaacctaagggttcctccgcaagg 107004
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 846 bits (427), Expect = 0.0 Identities = 496/519 (95%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134764 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 134705 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 134704 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 134645 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 134644 ataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagaggg 134585 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 134584 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 134525 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 134524 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 134465 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||| Sbjct: 134464 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccgaagct 134405 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||| ||||| ||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 134404 gtgggatgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcg 134345 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 ||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 134344 agcggtggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgag 134285 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 |||||||||||||||||||| |||| ||||||||||||| Sbjct: 134284 aatccaatgccccgaaaacctaagggttcctccgcaagg 134246 Score = 846 bits (427), Expect = 0.0 Identities = 496/519 (95%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106364 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 106423 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 106424 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 106483 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 106484 ataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagaggg 106543 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 106544 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 106603 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 106604 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 106663 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||| Sbjct: 106664 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccgaagct 106723 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||| ||||| ||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 106724 gtgggatgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcg 106783 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 ||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 106784 agcggtggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgag 106843 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 |||||||||||||||||||| |||| ||||||||||||| Sbjct: 106844 aatccaatgccccgaaaacctaagggttcctccgcaagg 106882
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 846 bits (427), Expect = 0.0 Identities = 496/519 (95%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135471 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 135412 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 135411 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 135352 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 135351 ataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagaggg 135292 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 135291 aaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtagg 135232 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 135231 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 135172 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 135171 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 135112 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||| ||||| ||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 135111 gtgggatgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcg 135052 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 ||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 135051 agcggtggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgag 134992 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 |||||||||||||||||||| |||| ||||||||||||| Sbjct: 134991 aatccaatgccccgaaaacctaagggttcctccgcaagg 134953 Score = 846 bits (427), Expect = 0.0 Identities = 496/519 (95%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107155 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 107214 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 107215 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 107274 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 107275 ataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagaggg 107334 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 107335 aaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtagg 107394 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 107395 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 107454 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 107455 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 107514 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||| ||||| ||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 107515 gtgggatgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcg 107574 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 ||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 107575 agcggtggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgag 107634 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 |||||||||||||||||||| |||| ||||||||||||| Sbjct: 107635 aatccaatgccccgaaaacctaagggttcctccgcaagg 107673
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 846 bits (427), Expect = 0.0 Identities = 496/519 (95%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135202 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 135143 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 135142 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 135083 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 135082 ataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagaggg 135023 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 135022 aaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtagg 134963 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 134962 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 134903 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 134902 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 134843 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||| ||||| ||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 134842 gtgggatgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcg 134783 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 ||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 134782 agcggtggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgag 134723 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 |||||||||||||||||||| |||| ||||||||||||| Sbjct: 134722 aatccaatgccccgaaaacctaagggttcctccgcaagg 134684 Score = 846 bits (427), Expect = 0.0 Identities = 496/519 (95%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106936 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 106995 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 106996 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 107055 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 107056 ataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagaggg 107115 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 107116 aaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtagg 107175 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 107176 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 107235 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 107236 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 107295 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||| ||||| ||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 107296 gtgggatgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcg 107355 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 ||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 107356 agcggtggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgag 107415 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 |||||||||||||||||||| |||| ||||||||||||| Sbjct: 107416 aatccaatgccccgaaaacctaagggttcctccgcaagg 107454
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 846 bits (427), Expect = 0.0 Identities = 496/519 (95%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 924 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 983 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 984 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 1043 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 1044 ataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagaggg 1103 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || Sbjct: 1104 aaacagcccggatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtagg 1163 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1164 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 1223 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1224 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 1283 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||| ||||| ||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 1284 gtgggatgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcg 1343 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 ||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1344 agcggtggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgag 1403 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 |||||||||||||||||||| |||| ||||||||||||| Sbjct: 1404 aatccaatgccccgaaaacctaagggttcctccgcaagg 1442
>dbj|AK105766.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E02, full insert sequence Length = 2146 Score = 839 bits (423), Expect = 0.0 Identities = 423/423 (100%) Strand = Plus / Plus Query: 105 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatggg 60 Query: 165 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 224 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 120 Query: 225 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 180 Query: 285 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 240 Query: 345 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 300 Query: 405 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 360 Query: 465 ttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgca 524 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgca 420 Query: 525 agg 527 ||| Sbjct: 421 agg 423
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 839 bits (423), Expect = 0.0 Identities = 495/519 (95%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134731 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 134672 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 134671 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaataatagatatgacctcaaa 134612 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 134611 ataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagaggg 134552 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 134551 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 134492 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 134491 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 134432 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||| Sbjct: 134431 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccgaagct 134372 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||| ||||| ||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 134371 gtgggatgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcg 134312 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 ||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 134311 agcggtggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgag 134252 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 |||||||||||||||||||| |||| ||||||||||||| Sbjct: 134251 aatccaatgccccgaaaacctaagggttcctccgcaagg 134213 Score = 839 bits (423), Expect = 0.0 Identities = 495/519 (95%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106331 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 106390 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 106391 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaataatagatatgacctcaaa 106450 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 106451 ataacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagaggg 106510 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 106511 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 106570 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 106571 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 106630 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||| Sbjct: 106631 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccgaagct 106690 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||| ||||| ||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 106691 gtgggatgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcg 106750 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 ||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 106751 agcggtggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgag 106810 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 |||||||||||||||||||| |||| ||||||||||||| Sbjct: 106811 aatccaatgccccgaaaacctaagggttcctccgcaagg 106849
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 831 bits (419), Expect = 0.0 Identities = 495/519 (95%), Gaps = 1/519 (0%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2597 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 2656 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 2657 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgactcaaaa 2716 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 2717 -taacaggggtcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagaggg 2775 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 2776 aaacagtccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 2835 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 2836 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 2895 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 || |||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 2896 gcscactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 2955 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||| ||||| ||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 2956 gtgggatgtaaaaatacatcggtaggggagcgttccgccttagagagaagcctccgcgcg 3015 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 ||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 3016 agcggtggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgag 3075 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 |||||||||||||||||||| |||| ||||||||||||| Sbjct: 3076 aatccaatgccccgaaaacctaagggttcctccgcaagg 3114
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 831 bits (419), Expect = 0.0 Identities = 494/519 (95%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 824 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 883 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 884 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 943 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 944 ataacaggggttaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 1003 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1004 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 1063 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1064 ggtgcaaagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 1123 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1124 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 1183 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||||| Sbjct: 1184 gtgggatgtaaaaatgcatccgtaggggagcgttccgccttaaagggaagcaaccgcgcc 1243 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 ||| |||| |||||||||||||||| |||||| |||||||||||| ||||||||||||| Sbjct: 1244 agcaagggtggacgaagcggaagcgaaaatgtccgcttgagtaacgcaaacattggtgag 1303 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 |||| |||||||| |||| | |||| ||||||||||||| Sbjct: 1304 aatctaatgcccccaaaaactaagggttcctccgcaagg 1342
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 815 bits (411), Expect = 0.0 Identities = 492/519 (94%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 131040 ccgaaatgcgttgaggcgcagcagttgactagacatctaggggtaaagcactgtttcggt 130981 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 130980 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 130921 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130920 ataacaagggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 130861 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 130860 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 130801 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 130800 ggtgcagagacaaccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 130741 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 130740 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 130681 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||| |||| | ||||||||||||||||||||||||||||||||| | ||||| Sbjct: 130680 gtgggatgtaaaaaagaatcggtaggggagcgttccgccttagagggaaggacccgcgcg 130621 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 ||| | | | |||||||||||||||||||||||||||||||||||| |||| |||||||| Sbjct: 130620 agcagtgctggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacgttggtgag 130561 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||| ||||||||||||| ||||||||||||| Sbjct: 130560 aatccaatgcctcgaaaacccaagggttcctccgcaagg 130522 Score = 815 bits (411), Expect = 0.0 Identities = 492/519 (94%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 104354 ccgaaatgcgttgaggcgcagcagttgactagacatctaggggtaaagcactgtttcggt 104413 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 104414 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 104473 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104474 ataacaagggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 104533 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 104534 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 104593 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 104594 ggtgcagagacaaccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 104653 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 104654 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 104713 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||| |||| | ||||||||||||||||||||||||||||||||| | ||||| Sbjct: 104714 gtgggatgtaaaaaagaatcggtaggggagcgttccgccttagagggaaggacccgcgcg 104773 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 ||| | | | |||||||||||||||||||||||||||||||||||| |||| |||||||| Sbjct: 104774 agcagtgctggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacgttggtgag 104833 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||| ||||||||||||| ||||||||||||| Sbjct: 104834 aatccaatgcctcgaaaacccaagggttcctccgcaagg 104872
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 811 bits (409), Expect = 0.0 Identities = 409/409 (100%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 451 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 510 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 511 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 570 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 571 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 630 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 631 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 690 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 691 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 750 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 751 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 810 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaa 417 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 811 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaa 859
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 807 bits (407), Expect = 0.0 Identities = 491/519 (94%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 129703 ccgaaatgcgttgaggcgcagcagttgaccggacatctaggggtaaagcactgtttcggt 129644 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 129643 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctgaaa 129584 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 129583 ataataagggtcaaggtcggccagtgagacgatgagggataagcttcatcgtcgagaggg 129524 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 129523 aaacagcccagatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 129464 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 129463 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 129404 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 129403 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 129344 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||| |||||| ||||||||||||||||||||||||||||||||| | ||||| Sbjct: 129343 gtgggatgtaaaaatgaatcggtaggggagcgttccgccttagagggaagtacccgcgcg 129284 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 ||| | ||| |||||||||||||||||||||||||||||||||||| |||| |||||||| Sbjct: 129283 agcagtggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacgttggtgag 129224 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||| |||||||| |||| ||||||||||||| Sbjct: 129223 aatccaatgcctcgaaaacctaagggttcctccgcaagg 129185 Score = 807 bits (407), Expect = 0.0 Identities = 491/519 (94%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 102753 ccgaaatgcgttgaggcgcagcagttgaccggacatctaggggtaaagcactgtttcggt 102812 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 102813 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctgaaa 102872 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 102873 ataataagggtcaaggtcggccagtgagacgatgagggataagcttcatcgtcgagaggg 102932 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 102933 aaacagcccagatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 102992 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 102993 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 103052 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 103053 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 103112 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||| |||||| ||||||||||||||||||||||||||||||||| | ||||| Sbjct: 103113 gtgggatgtaaaaatgaatcggtaggggagcgttccgccttagagggaagtacccgcgcg 103172 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 ||| | ||| |||||||||||||||||||||||||||||||||||| |||| |||||||| Sbjct: 103173 agcagtggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacgttggtgag 103232 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||| |||||||| |||| ||||||||||||| Sbjct: 103233 aatccaatgcctcgaaaacctaagggttcctccgcaagg 103271
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 803 bits (405), Expect = 0.0 Identities = 491/519 (94%), Gaps = 8/519 (1%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134157 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 134098 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 134097 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgatcccaaa 134038 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134037 -------gggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 133985 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 133984 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 133925 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 133924 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 133865 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 133864 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 133805 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 133804 gtgggatgtaaaaatgcatcggtaggggagcgttccg-cttagagggaagctcccgcgcg 133746 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 ||| || || |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 133745 agcaggtgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgag 133686 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 |||||||||||||||||||| |||| ||||||||||||| Sbjct: 133685 aatccaatgccccgaaaacctaagggttcctccgcaagg 133647 Score = 803 bits (405), Expect = 0.0 Identities = 491/519 (94%), Gaps = 8/519 (1%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106125 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 106184 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 106185 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgatcccaaa 106244 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106245 -------gggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 106297 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 106298 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 106357 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 106358 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 106417 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 106418 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 106477 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||| Sbjct: 106478 gtgggatgtaaaaatgcatcggtaggggagcgttccg-cttagagggaagctcccgcgcg 106536 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 ||| || || |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 106537 agcaggtgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgag 106596 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 |||||||||||||||||||| |||| ||||||||||||| Sbjct: 106597 aatccaatgccccgaaaacctaagggttcctccgcaagg 106635
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 785 bits (396), Expect = 0.0 Identities = 490/520 (94%), Gaps = 1/520 (0%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1322 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 1381 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1382 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctccaa 1441 Query: 129 ataacaggggtcaaggtcggccagtgagacgatggggg-ataagcttcatcgtcgagagg 187 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1442 ataacaggggtcaaggtcggccagtgagacgatggggggataagcttcatcgtcgagagg 1501 Query: 188 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgg 247 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 1502 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtag 1561 Query: 248 gggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaat 307 ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1562 gggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaat 1621 Query: 308 agctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagc 367 |||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1622 agctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagc 1681 Query: 368 tgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcga 427 |||||||||| |||| ||||||||||||||||||||| |||| |||||||| | ||| Sbjct: 1682 tgtgggatgtaaaaaaacatcggtaggggagcgttccgtgttagggggaagcatcggcgc 1741 Query: 428 aagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtga 487 ||| | |||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 1742 gagccatgccagacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtga 1801 Query: 488 gaatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||| |||| ||||||||||||| Sbjct: 1802 gaatccaatgccccgaaaacctaagggttcctccgcaagg 1841
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 783 bits (395), Expect = 0.0 Identities = 489/519 (94%), Gaps = 1/519 (0%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 844 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 903 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 904 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctaaaa 963 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 964 ataacaagggtcaaggtcggcaagtgagacgatgggggataagcttcatcgtcgagaggg 1023 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 ||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||| || Sbjct: 1024 aaacagccctgatcacccgctaaggcccctaaatgatcgctcagtgataaaggaggtagg 1083 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| |||||||||||||||||| ||| |||||||||||||| ||||||||||||||| Sbjct: 1084 ggtgcagagacagccaggaggtttg-ctataagcagccacccttgaaagagtgcgtaata 1142 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||||||| Sbjct: 1143 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagtgatctgccgaagct 1202 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||| |||| |||||||||||||||||||||| ||||| |||||||| | ||| Sbjct: 1203 gtgggatgtaaaaaggcatcggtaggggagcgttccgtcttagggggaagcacctgcgcg 1262 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 ||| | ||| |||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1263 agcagtggtagacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgag 1322 Query: 489 aatccaatgccccgaaaacccaaggtttcctccgcaagg 527 |||||||||||||||||||| |||| ||||||||||||| Sbjct: 1323 aatccaatgccccgaaaacctaagggttcctccgcaagg 1361
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 763 bits (385), Expect = 0.0 Identities = 489/521 (93%), Gaps = 2/521 (0%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcgg 67 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 829 ccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcgg 888 Query: 68 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaa 127 ||||||||||| |||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 889 tgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgatcccca 948 Query: 128 aataacagggg-tcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 186 ||||||||||| | |||||| ||||||||||| ||||||||||||||||||||| |||| Sbjct: 949 aataacaggggataaaggtcaaccagtgagacggtgggggataagcttcatcgtcaagag 1008 Query: 187 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 246 ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1009 ggaaacagcccagatcaccagctaaggcccctaaatgaccgctcagtggtaaaggaggta 1068 Query: 247 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 306 || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1069 ggagtgcaaagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 1128 Query: 307 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 366 ||||||||||||| ||||| ||||||| ||||||||||||| ||||||| |||||||||| Sbjct: 1129 tagctcactgatcaagcgctcttgcgccgaagatgaacgggactaagcggtctgccgaag 1188 Query: 367 ctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcg 426 ||||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||| Sbjct: 1189 ctgtgggatgtcaaaatacatcggtaggggagcgttccgccttagagggaagcatcagcg 1248 Query: 427 aaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtg 486 ||| || || |||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1249 cgagcaggtgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtg 1308 Query: 487 agaatccaatgccccgaaaacccaaggtttcctccgcaagg 527 |||||||||||||||||||||| |||| ||||||||||||| Sbjct: 1309 agaatccaatgccccgaaaacctaagggttcctccgcaagg 1349
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 747 bits (377), Expect = 0.0 Identities = 490/528 (92%), Gaps = 16/528 (3%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 139533 ccgaaatgcgttgaggcgcagcggttgactggacatctaggggtaaagcactgtttcggt 139474 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||| || || ||| Sbjct: 139473 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatctggcctcaaa 139414 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139413 a-------ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 139361 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 139360 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 139301 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 139300 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 139241 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 139240 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 139181 Query: 369 gtgggat-------gtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaa 421 ||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 139180 gtgggatgtaaaaagtaaaaatgcatcggtaggggagcgttccgccttagagggaagcac 139121 Query: 422 ccgcgaaagc--gggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaac 479 ||||| ||| | | || |||||||||||||||||||||||||||||||||||| |||| Sbjct: 139120 ccgcgcgagcaggcgtgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaac 139061 Query: 480 attggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 139060 attggtgagaatccaatgccccgaaaacctaagggttcctccgcaagg 139013 Score = 747 bits (377), Expect = 0.0 Identities = 490/528 (92%), Gaps = 16/528 (3%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 110527 ccgaaatgcgttgaggcgcagcggttgactggacatctaggggtaaagcactgtttcggt 110586 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||| || || ||| Sbjct: 110587 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatctggcctcaaa 110646 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110647 a-------ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 110699 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 110700 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 110759 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 110760 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 110819 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 110820 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 110879 Query: 369 gtgggat-------gtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaa 421 ||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 110880 gtgggatgtaaaaagtaaaaatgcatcggtaggggagcgttccgccttagagggaagcac 110939 Query: 422 ccgcgaaagc--gggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaac 479 ||||| ||| | | || |||||||||||||||||||||||||||||||||||| |||| Sbjct: 110940 ccgcgcgagcaggcgtgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaac 110999 Query: 480 attggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 111000 attggtgagaatccaatgccccgaaaacctaagggttcctccgcaagg 111047
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 743 bits (375), Expect = 0.0 Identities = 486/518 (93%), Gaps = 5/518 (0%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 847 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 906 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 907 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 966 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 967 ataacaggggttaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 1026 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1027 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 1086 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1087 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 1146 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1147 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 1206 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaac--cgcg 426 ||||||||| |||||||||||||||||||||||||||||||| | |||| || | |||| Sbjct: 1207 gtgggatgtaaaaatgcatcggtaggggagcgttccgccttaaaaggaaacacccgcgcg 1266 Query: 427 aaagcgggggtcgacgaagcgg-aagcgagaatgtcggcttgagtaacg-aaaaca-ttg 483 || |||| | |||||| ||| || | ||||||||||||||||||||| |||||| ||| Sbjct: 1267 aacaaggggttggacgaaacggaaaccaagaatgtcggcttgagtaacgcaaaacatttg 1326 Query: 484 gtgagaatccaatgccccgaaaacccaaggtttcctcc 521 ||||||||| ||||||||||||||| || | ||||||| Sbjct: 1327 gtgagaatctaatgccccgaaaacctaaaggttcctcc 1364
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 739 bits (373), Expect = 0.0 Identities = 486/521 (93%), Gaps = 2/521 (0%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcgg 67 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 117320 ccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcgg 117261 Query: 68 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaa 127 ||||||||||| |||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 117260 tgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgatcccca 117201 Query: 128 aataacaggggtcaa-ggtcggccagtgagacgatgggggataagcttcatcgtcgagag 186 ||||| ||||| || |||| ||||||||||| ||||||||||||||||||||| |||| Sbjct: 117200 aataatagggggtaatggtcaaccagtgagacggtgggggataagcttcatcgtcaagag 117141 Query: 187 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 246 ||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 117140 ggaaacagcccagatcaccagctaaggcccctaaatgaccgctaagtggtaaaggaggta 117081 Query: 247 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 306 || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 117080 ggagtgcaaagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 117021 Query: 307 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 366 ||||||||||||| ||||| ||||||| ||||||||||||| ||||||| |||||||||| Sbjct: 117020 tagctcactgatcaagcgctcttgcgccgaagatgaacgggactaagcggtctgccgaag 116961 Query: 367 ctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcg 426 ||||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||| Sbjct: 116960 ctgtgggatgtcaaaatacatcggtaggggagcgttccgccttagagggaagcatcagcg 116901 Query: 427 aaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtg 486 ||| || || |||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 116900 cgagcaggtgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtg 116841 Query: 487 agaatccaatgccccgaaaacccaaggtttcctccgcaagg 527 |||||||||||||||||||||| |||| ||||||||||||| Sbjct: 116840 agaatccaatgccccgaaaacctaagggttcctccgcaagg 116800 Score = 739 bits (373), Expect = 0.0 Identities = 486/521 (93%), Gaps = 2/521 (0%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcgg 67 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 90782 ccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcgg 90841 Query: 68 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaa 127 ||||||||||| |||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 90842 tgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgatcccca 90901 Query: 128 aataacaggggtcaa-ggtcggccagtgagacgatgggggataagcttcatcgtcgagag 186 ||||| ||||| || |||| ||||||||||| ||||||||||||||||||||| |||| Sbjct: 90902 aataatagggggtaatggtcaaccagtgagacggtgggggataagcttcatcgtcaagag 90961 Query: 187 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 246 ||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||| Sbjct: 90962 ggaaacagcccagatcaccagctaaggcccctaaatgaccgctaagtggtaaaggaggta 91021 Query: 247 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 306 || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 91022 ggagtgcaaagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 91081 Query: 307 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 366 ||||||||||||| ||||| ||||||| ||||||||||||| ||||||| |||||||||| Sbjct: 91082 tagctcactgatcaagcgctcttgcgccgaagatgaacgggactaagcggtctgccgaag 91141 Query: 367 ctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcg 426 ||||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||| Sbjct: 91142 ctgtgggatgtcaaaatacatcggtaggggagcgttccgccttagagggaagcatcagcg 91201 Query: 427 aaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtg 486 ||| || || |||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 91202 cgagcaggtgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtg 91261 Query: 487 agaatccaatgccccgaaaacccaaggtttcctccgcaagg 527 |||||||||||||||||||||| |||| ||||||||||||| Sbjct: 91262 agaatccaatgccccgaaaacctaagggttcctccgcaagg 91302
>gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0042L15, from chromosome 3, complete sequence Length = 172475 Score = 729 bits (368), Expect = 0.0 Identities = 368/368 (100%) Strand = Plus / Minus Query: 160 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 219 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63889 atgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggccccta 63830 Query: 220 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 279 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63829 aatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctaga 63770 Query: 280 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 339 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63769 agcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaaga 63710 Query: 340 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 399 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63709 tgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagc 63650 Query: 400 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 459 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63649 gttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatg 63590 Query: 460 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 519 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63589 tcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 63530 Query: 520 ccgcaagg 527 |||||||| Sbjct: 63529 ccgcaagg 63522
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 724 bits (365), Expect = 0.0 Identities = 484/521 (92%), Gaps = 2/521 (0%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 51859 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcagt 51800 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga-tatgacccaaa 127 |||||| | | ||||||||||||||||| ||||||||||||||||||| ||||||| | | Sbjct: 51799 gcgggccgtgagagcggtaccaaatcgaagcaaactctgaatactagaatatgacctaca 51740 Query: 128 aataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagg 187 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51739 aataataggggtaaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagg 51680 Query: 188 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg- 246 ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 51679 gaaacagcccggatcaccagctaaggcccctaattgatcgctcagtgataaaggaggtta 51620 Query: 247 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 306 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 51619 ggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 51560 Query: 307 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 366 ||||| ||||||||||||| ||||||| ||| ||||||||||||||||||| ||||||| Sbjct: 51559 tagcttactgatcgagcgctcttgcgccgaatatgaacggggctaagcgattcgccgaag 51500 Query: 367 ctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcg 426 ||||||||||| |||| ||||||||||||||||||||||||||||||||||| | || Sbjct: 51499 ctgtgggatgtaaaaagacatcggtaggggagcgttccgccttagagggaagcctctgca 51440 Query: 427 aaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtg 486 ||| | ||| |||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 51439 cgagcagcggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtg 51380 Query: 487 agaatccaatgccccgaaaacccaaggtttcctccgcaagg 527 |||||||||||||||||||||| |||| ||||||||||||| Sbjct: 51379 agaatccaatgccccgaaaacctaagggttcctccgcaagg 51339 Score = 724 bits (365), Expect = 0.0 Identities = 484/521 (92%), Gaps = 2/521 (0%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 37969 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcagt 38028 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga-tatgacccaaa 127 |||||| | | ||||||||||||||||| ||||||||||||||||||| ||||||| | | Sbjct: 38029 gcgggccgtgagagcggtaccaaatcgaagcaaactctgaatactagaatatgacctaca 38088 Query: 128 aataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagg 187 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 38089 aataataggggtaaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagg 38148 Query: 188 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg- 246 ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 38149 gaaacagcccggatcaccagctaaggcccctaattgatcgctcagtgataaaggaggtta 38208 Query: 247 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 306 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 38209 ggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 38268 Query: 307 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 366 ||||| ||||||||||||| ||||||| ||| ||||||||||||||||||| ||||||| Sbjct: 38269 tagcttactgatcgagcgctcttgcgccgaatatgaacggggctaagcgattcgccgaag 38328 Query: 367 ctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcg 426 ||||||||||| |||| ||||||||||||||||||||||||||||||||||| | || Sbjct: 38329 ctgtgggatgtaaaaagacatcggtaggggagcgttccgccttagagggaagcctctgca 38388 Query: 427 aaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtg 486 ||| | ||| |||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 38389 cgagcagcggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtg 38448 Query: 487 agaatccaatgccccgaaaacccaaggtttcctccgcaagg 527 |||||||||||||||||||||| |||| ||||||||||||| Sbjct: 38449 agaatccaatgccccgaaaacctaagggttcctccgcaagg 38489
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 724 bits (365), Expect = 0.0 Identities = 484/521 (92%), Gaps = 2/521 (0%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcgg 67 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 829 ccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcgg 888 Query: 68 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaa 127 ||||||||||| |||||||||||||||||||||||||||||||||||||||||| | Sbjct: 889 tgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgatctccg 948 Query: 128 aataacaggggtcaagg-tcggccagtgagacgatgggggataagcttcatcgtcgagag 186 |||||| |||| |||| || ||||||||||| |||||||||||||||||||||||||| Sbjct: 949 aataacgggggataagggtcaaccagtgagacggtgggggataagcttcatcgtcgagag 1008 Query: 187 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 246 ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1009 ggaaacagcccagatcaccagctaaggcccctaaatgaccgctcagtggtaaaggaggta 1068 Query: 247 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 306 || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1069 ggagtgcaaagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 1128 Query: 307 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 366 ||||||||||||| ||||| ||||||| ||||||||||||| ||||||| |||||||||| Sbjct: 1129 tagctcactgatcaagcgctcttgcgccgaagatgaacgggactaagcggtctgccgaag 1188 Query: 367 ctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcg 426 |||||||||||||||| ||||||||||||||||||||||||||| |||||||| | ||| Sbjct: 1189 ctgtgggatgtcaaaaaacatcggtaggggagcgttccgccttagggggaagcaccagcg 1248 Query: 427 aaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtg 486 ||| || || |||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1249 cgagcaggtgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtg 1308 Query: 487 agaatccaatgccccgaaaacccaaggtttcctccgcaagg 527 |||||||||||||||||||||| |||| ||||||||||||| Sbjct: 1309 agaatccaatgccccgaaaacctaagggttcctccgcaagg 1349
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 724 bits (365), Expect = 0.0 Identities = 484/521 (92%), Gaps = 2/521 (0%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 4897 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcagt 4956 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga-tatgacccaaa 127 |||||| | | ||||||||||||||||| ||||||||||||||||||| ||||||| | | Sbjct: 4957 gcgggccgtgagagcggtaccaaatcgaagcaaactctgaatactagaatatgacctaca 5016 Query: 128 aataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagg 187 ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5017 aataataggggtaaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagg 5076 Query: 188 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg- 246 ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 5077 gaaacagcccggatcaccagctaaggcccctaattgatcgctcagtgataaaggaggtta 5136 Query: 247 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 306 |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 5137 ggggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaa 5196 Query: 307 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 366 ||||| ||||||||||||| ||||||| ||| ||||||||||||||||||| ||||||| Sbjct: 5197 tagcttactgatcgagcgctcttgcgccgaatatgaacggggctaagcgattcgccgaag 5256 Query: 367 ctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcg 426 ||||||||||| |||| ||||||||||||||||||||||||||||||||||| | || Sbjct: 5257 ctgtgggatgtaaaaagacatcggtaggggagcgttccgccttagagggaagcctctgca 5316 Query: 427 aaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtg 486 ||| | ||| |||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 5317 cgagcagcggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtg 5376 Query: 487 agaatccaatgccccgaaaacccaaggtttcctccgcaagg 527 |||||||||||||||||||||| |||| ||||||||||||| Sbjct: 5377 agaatccaatgccccgaaaacctaagggttcctccgcaagg 5417
>dbj|AK071923.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072N03, full insert sequence Length = 1663 Score = 720 bits (363), Expect = 0.0 Identities = 363/363 (100%) Strand = Plus / Plus Query: 165 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 224 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatga 60 Query: 225 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcag 120 Query: 285 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaac 180 Query: 345 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttcc 240 Query: 405 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggc 300 Query: 465 ttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgca 524 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgca 360 Query: 525 agg 527 ||| Sbjct: 361 agg 363
>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S rRNA gene, 23S rRNA gene (partial) and 5S rRNA gene Length = 6689 Score = 714 bits (360), Expect = 0.0 Identities = 460/490 (93%), Gaps = 5/490 (1%) Strand = Plus / Plus Query: 38 tggacatctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgag 97 ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| Sbjct: 317 tggacatctaggggtaaagcactgtttcggtgcgggccgcgagagcggtaccaaatcgag 376 Query: 98 gcaaactctgaatactagatatgacccaaaaataacaggggtcaaggtcggccagtgaga 157 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct: 377 gcaaactctgaatactagatatgacctcaaaataacaggggtcaaggtcggctagtgaga 436 Query: 158 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 217 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 437 cgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccc 496 Query: 218 taaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgccta 277 ||||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 497 taaatgatcgctcagtgataaaggaggtaggggtgc-gagacagccaggaggtttgccta 555 Query: 278 gaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaa 337 ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 556 gaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaa 615 Query: 338 gatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagggga 397 |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| Sbjct: 616 gatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagggga 675 Query: 398 gcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaa 457 |||||||||||||||| ||||| ||||| ||||| ||| ||||||||||||||||||| Sbjct: 676 gcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcgagaa 735 Query: 458 tgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttc 517 |||| | ||||| | ||||||||||||||||||||||||||||||||| |||| ||| Sbjct: 736 tgtc-acgtgagt---gcaaacattggtgagaatccaatgccccgaaaacctaagggttc 791 Query: 518 ctccgcaagg 527 |||||||||| Sbjct: 792 ctccgcaagg 801
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 712 bits (359), Expect = 0.0 Identities = 485/526 (92%), Gaps = 7/526 (1%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 826 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcagt 885 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga-tatgacccaaa 127 |||||| | | ||||||||||||||||| ||||||||||||||||||| ||||||| ||| Sbjct: 886 gcgggccgtgagagcggtaccaaatcgaagcaaactctgaatactagaatatgacctaaa 945 Query: 128 aataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagg 187 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 946 aataacaggggtaaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagg 1005 Query: 188 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgg 247 |||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||| | Sbjct: 1006 gaaacagcccagatcaccagctaaggcccctaattgatcgctcagtgataaaggaggtag 1065 Query: 248 gggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaat 307 ||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||| Sbjct: 1066 gggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaatagtgcgtaat 1125 Query: 308 agctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagc 367 |||| ||||||||||||| ||||||| |||||| ||||||||||||||||| |||||||| Sbjct: 1126 agcttactgatcgagcgctcttgcgccgaagattaacggggctaagcgatccgccgaagc 1185 Query: 368 tgtgggatg------tcaaaatgcatcggtaggggagcgttccgccttagagggaagcaa 421 ||||||||| | ||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1186 tgtgggatgtaaaaataaaaatacatcggtaggggagcgttccgccttagagggaagcct 1245 Query: 422 ccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacat 481 | || ||| | ||| |||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1246 ctgcacgagcagcggtggacgaaacggaagcgagaatgtcggcttgagtaacgcaaacat 1305 Query: 482 tggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 1306 tggtgagaatccaatgccccgaaaacctaagggttcctccgcaagg 1351
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 702 bits (354), Expect = 0.0 Identities = 481/520 (92%), Gaps = 5/520 (0%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcgg 67 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 87092 ccgaaatgcgttgaggcgcagcagttgactggaccatctaggggtaaagcactgtttcgg 87151 Query: 68 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaa 127 | ||||| ||| |||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 87152 tacgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagat-tgcccc--- 87207 Query: 128 aataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagg 187 ||||| |||||| | |||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 87208 aataaaaggggtaagggtcaaccagtgagacgatgggggataagcttcatcgtcgagagg 87267 Query: 188 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgg 247 | |||||||| |||||||||||||||||||||||||||||||||||||| ||||| || Sbjct: 87268 ggaacagcccagatcaccagctaaggcccctaaatgaccgctcagtgatgaaggaagtac 87327 Query: 248 gggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaat 307 | |||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| Sbjct: 87328 gagtgcaaagacagccaggaggtttgcctagaagcagccaaccttgaaagagtgcgtaat 87387 Query: 308 agctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagc 367 |||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 87388 agctcactgatcgagcgctcttgcgccgaagatgaacgggactaagcgatctgccgaagc 87447 Query: 368 tgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcga 427 |||||||||||||||| |||||||||||||||||||||||| |||| |||||| | ||| Sbjct: 87448 tgtgggatgtcaaaatacatcggtaggggagcgttccgcctcagagagaagcaccggcgc 87507 Query: 428 aagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtga 487 ||| || || |||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 87508 gagcaggtgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtga 87567 Query: 488 gaatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||| |||| ||||||||||||| Sbjct: 87568 gaatccaatgccccgaaaacctaagggttcctccgcaagg 87607
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 684 bits (345), Expect = 0.0 Identities = 484/526 (92%), Gaps = 7/526 (1%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcgg 67 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 145730 ccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcgg 145671 Query: 68 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacc--ca 125 ||||||||||| |||||||||||||||||||||||||||||||||||| ||||| | || Sbjct: 145670 tgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactaggtatgatctcca 145611 Query: 126 aa---aataacagg-ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 181 || || |||||| ||| |||||| |||||||||||| ||||||||||||||||||||| Sbjct: 145610 aatgaaagaacaggaggtaaaggtcagccagtgagacggtgggggataagcttcatcgtc 145551 Query: 182 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 241 ||||||| |||||||| |||||||||||||||||||||||||||||||||||| | |||| Sbjct: 145550 gagaggggaacagcccagatcaccagctaaggcccctaaatgaccgctcagtggtgaagg 145491 Query: 242 aggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtg 301 |||| || ||||| |||||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 145490 aggtaggagtgcagagacagccaggaagtttgcctagaagcagccacccttgaaagagtg 145431 Query: 302 cgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgc 361 |||||||||||||||||| ||||| ||||||| ||| ||||||||| ||||||| ||||| Sbjct: 145430 cgtaatagctcactgatcaagcgctcttgcgccgaaaatgaacgggactaagcggtctgc 145371 Query: 362 cgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaa 421 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 145370 cgaagctgtgggatgtcaaaaaacatcggtaggggagcgttccgccttagagggaagcac 145311 Query: 422 ccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacat 481 | ||| ||| || || ||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 145310 cagcgcgagcaggtgtggacaaagcggaagcgagaatgtcggcttgagtaacgcaaacat 145251 Query: 482 tggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 145250 tggtgagaatccaatgccccgaaaacctaagggttcctccgcaagg 145205 Score = 684 bits (345), Expect = 0.0 Identities = 484/526 (92%), Gaps = 7/526 (1%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcgg 67 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 112732 ccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcgg 112791 Query: 68 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacc--ca 125 ||||||||||| |||||||||||||||||||||||||||||||||||| ||||| | || Sbjct: 112792 tgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactaggtatgatctcca 112851 Query: 126 aa---aataacagg-ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtc 181 || || |||||| ||| |||||| |||||||||||| ||||||||||||||||||||| Sbjct: 112852 aatgaaagaacaggaggtaaaggtcagccagtgagacggtgggggataagcttcatcgtc 112911 Query: 182 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 241 ||||||| |||||||| |||||||||||||||||||||||||||||||||||| | |||| Sbjct: 112912 gagaggggaacagcccagatcaccagctaaggcccctaaatgaccgctcagtggtgaagg 112971 Query: 242 aggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtg 301 |||| || ||||| |||||||||||| |||||||||||||||||||||||| |||||||| Sbjct: 112972 aggtaggagtgcagagacagccaggaagtttgcctagaagcagccacccttgaaagagtg 113031 Query: 302 cgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgc 361 |||||||||||||||||| ||||| ||||||| ||| ||||||||| ||||||| ||||| Sbjct: 113032 cgtaatagctcactgatcaagcgctcttgcgccgaaaatgaacgggactaagcggtctgc 113091 Query: 362 cgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaa 421 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 113092 cgaagctgtgggatgtcaaaaaacatcggtaggggagcgttccgccttagagggaagcac 113151 Query: 422 ccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacat 481 | ||| ||| || || ||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 113152 cagcgcgagcaggtgtggacaaagcggaagcgagaatgtcggcttgagtaacgcaaacat 113211 Query: 482 tggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 113212 tggtgagaatccaatgccccgaaaacctaagggttcctccgcaagg 113257
>gb|AY694134.1| Pennisetum glaucum clone PGP005 23S ribosomal RNA gene, partial sequence; chloroplast Length = 654 Score = 682 bits (344), Expect = 0.0 Identities = 395/412 (95%) Strand = Plus / Minus Query: 116 atatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttc 175 ||||||||||||||||||| |||||||||||||||||| |||| ||||||| ||||||| Sbjct: 640 atatgacccaaaaataacacgggtcaaggtcggccagtaagacattgggggaaaagcttc 581 Query: 176 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 235 ||| || || ||||||||||||||| ||||||||||||| |||||||||||||| ||| Sbjct: 580 atcatctcgaaagaaacagcccggatccccagctaaggcccttaaatgaccgctcaatga 521 Query: 236 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 295 |||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||| Sbjct: 520 taaaggaggtgggggtgcaaagccagccatgaagtttgcctagaagcagccaccctttaa 461 Query: 296 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 460 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 401 Query: 356 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagaggg 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 400 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagaggg 341 Query: 416 aagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacga 475 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 340 aagcaaacgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacga 281 Query: 476 aaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 527 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 280 aaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 229
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 676 bits (341), Expect = 0.0 Identities = 383/397 (96%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130964 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 130905 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 130904 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctccaa 130845 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130844 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 130785 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 130784 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 130725 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 130724 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 130665 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||| Sbjct: 130664 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccgaagct 130605 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccg 405 ||||||||| |||| ||||||||||||||||||||| Sbjct: 130604 gtgggatgtaaaaaaacatcggtaggggagcgttccg 130568 Score = 676 bits (341), Expect = 0.0 Identities = 383/397 (96%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102481 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 102540 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 102541 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctccaa 102600 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102601 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 102660 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 102661 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 102720 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 102721 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 102780 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||| Sbjct: 102781 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcggtctgccgaagct 102840 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccg 405 ||||||||| |||| ||||||||||||||||||||| Sbjct: 102841 gtgggatgtaaaaaaacatcggtaggggagcgttccg 102877 Score = 153 bits (77), Expect = 7e-34 Identities = 86/89 (96%) Strand = Plus / Minus Query: 439 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 498 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 130534 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 130475 Query: 499 cccgaaaacccaaggtttcctccgcaagg 527 |||||||||| |||| ||||||||||||| Sbjct: 130474 cccgaaaacctaagggttcctccgcaagg 130446 Score = 153 bits (77), Expect = 7e-34 Identities = 86/89 (96%) Strand = Plus / Plus Query: 439 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 498 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 102911 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 102970 Query: 499 cccgaaaacccaaggtttcctccgcaagg 527 |||||||||| |||| ||||||||||||| Sbjct: 102971 cccgaaaacctaagggttcctccgcaagg 102999
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 670 bits (338), Expect = 0.0 Identities = 472/514 (91%), Gaps = 2/514 (0%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 847 ccgaaatgcgttgaggcgcagcagttgactggacatctaagggtaaagcactgtttcggt 906 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| ||||||||||||||||||||||||||||||||||| |||||||| ||| Sbjct: 907 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactaaatatgacctcaaa 966 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 967 ataacaggggttaaggtcggccagtgagacgatgggggataagcttcatcgtccagaggg 1026 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1027 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 1086 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||| |||||||||||| |||||||||||||| ||||||||||||||| Sbjct: 1087 ggtgcacagacagccaagaggtttgcctaaaagcagccacccttgaaagagtgcgtaata 1146 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1147 actcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 1206 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||| |||||||||| ||||||||||||||| ||||| ||||||||| |||| Sbjct: 1207 gtgggatgtaaaaatgcatccgtaggggagcgttcccccttatagggaagcacccgcccc 1266 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaaca-ttggtga 487 ||| |||| |||||| | | | | | |||||| ||||||||| ||||| ||||||| Sbjct: 1267 agcaagggtggacgaaaccg-atctaaaatgtccccttgagtaaaccaaacatttggtga 1325 Query: 488 gaatccaatgccccgaaaacccaaggtttcctcc 521 |||||||||||||| |||||| |||| ||||||| Sbjct: 1326 gaatccaatgcccccaaaacctaagggttcctcc 1359
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 668 bits (337), Expect = 0.0 Identities = 391/409 (95%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 835 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 894 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 895 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 954 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 955 ataacaggggttaaggtcggccagtgagacaatgggggataagcttcatcgtcgagaggg 1014 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || Sbjct: 1015 aaacagcccggatcaccagctaaggcccctaaatgaccgctcaatgataaaggaggtagg 1074 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||| |||||||||||| |||||||||||||| ||||||||||||||| Sbjct: 1075 ggtgcacagacagccacgaggtttgcctataagcagccacccttgaaagagtgcgtaata 1134 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 1135 gctcactgatcgagcgctcttgcgcccaagatgaacggggctaaacgatctgccgaagct 1194 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaa 417 ||||||||| |||||||||||||||||||||||||| |||||||||||| Sbjct: 1195 gtgggatgtaaaaatgcatcggtaggggagcgttcccccttagagggaa 1243 Score = 56.0 bits (28), Expect = 1e-04 Identities = 53/60 (88%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 463 gcttgagtaacgaaaacattggtgagaatccaatg-ccccgaaaacccaaggtttcctcc 521 |||||||||||| ||||| ||||||||||| |||| ||||||||| | |||| ||||||| Sbjct: 1288 gcttgagtaacgcaaacaatggtgagaatctaatgcccccgaaaaactaagggttcctcc 1347
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 668 bits (337), Expect = 0.0 Identities = 454/493 (92%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 846 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 905 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 906 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 965 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 ||||||||||| |||||||||||||||||| |||||||||||||||||||||| |||||| Sbjct: 966 ataacaggggttaaggtcggccagtgagaccatgggggataagcttcatcgtccagaggg 1025 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1026 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 1085 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1086 ggtgcagagacagccaagaggtttgcctagaagcagccacccttgaaagagtgcgtaata 1145 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||| ||||| ||||||| || |||||||||||||||||||||||||||||| Sbjct: 1146 gctcactgatccagcgctcttgcgcccaaaatgaacggggctaagcgatctgccgaagct 1205 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaa 428 ||||||||| |||||||||| ||||||||||||||| ||||| |||||| || || | Sbjct: 1206 gtgggatgtaaaaatgcatccgtaggggagcgttcccccttaaagggaaacacccccccc 1265 Query: 429 agcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgag 488 | | |||| ||| || ||||| | |||||||| || | ||||||| ||||||||||||| Sbjct: 1266 aacatgggtggaccaaacggaaaccagaatgtccgccttagtaacgcaaacattggtgag 1325 Query: 489 aatccaatgcccc 501 |||| |||||||| Sbjct: 1326 aatctaatgcccc 1338
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 668 bits (337), Expect = 0.0 Identities = 477/520 (91%), Gaps = 4/520 (0%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcgg 67 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 89178 ccgaaatgcgttgaggcgcagcagttgactggaccatctaggggtaaagcactgtttcgg 89237 Query: 68 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaa 127 | ||||| || |||||||||||||||||||||||||||||||||||||| |||| || Sbjct: 89238 tacgggccacgagagcggtaccaaatcgaggcaaactctgaatactagatt--accccaa 89295 Query: 128 aataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagg 187 | || ||||| | |||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 89296 taaaag-ggggtaagggtcaaccagtgagacgatgggggataagcttcatcgtcgagagg 89354 Query: 188 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgg 247 | |||||||| |||||||||||||||||||||||||||||||||||||| ||||| || Sbjct: 89355 ggaacagcccagatcaccagctaaggcccctaaatgaccgctcagtgatgaaggaagtac 89414 Query: 248 gggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaat 307 | |||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| Sbjct: 89415 gagtgcaaagacagccaggaggtttgcctagaagcagccaaccttgaaagagtgcgtaat 89474 Query: 308 agctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagc 367 |||||||||||||||||| | ||||| ||||||||||||| ||||||||||||||||||| Sbjct: 89475 agctcactgatcgagcgctcgtgcgccgaagatgaacgggactaagcgatctgccgaagc 89534 Query: 368 tgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcga 427 |||||||||| ||||| |||||||||||||||||||||||| ||||||||||| | ||| Sbjct: 89535 tgtgggatgtaaaaatacatcggtaggggagcgttccgcctcagagggaagcaccggcgc 89594 Query: 428 aagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtga 487 ||| || || |||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 89595 gagcaggtgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtga 89654 Query: 488 gaatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||| |||| ||||||||||||| Sbjct: 89655 gaatccaatgccccgaaaacctaagggttcctccgcaagg 89694
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 666 bits (336), Expect = 0.0 Identities = 393/412 (95%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 833 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 892 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 893 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctccaa 952 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 953 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtccagaggg 1012 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1013 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 1072 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct: 1073 ggtgcagagacagccaggaggtttgcctaaaagcagccacccttgaaagagtgcgtaata 1132 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| |||||||||||||||||| ||||||||||||||| Sbjct: 1133 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaaacgatctgccgaagct 1192 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagca 420 ||||||||| |||| ||||||||||||||||||||| |||| |||||||| Sbjct: 1193 gtgggatgtaaaaaaacatcggtaggggagcgttccgtgttagggggaagca 1244
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 654 bits (330), Expect = 0.0 Identities = 397/418 (94%), Gaps = 1/418 (0%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 808 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 867 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 868 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctccaa 927 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 928 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 987 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || Sbjct: 988 aaacagcccggatcaccagctaaggcccctaaatgaccgcccagtgataaaggaggtagg 1047 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1048 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 1107 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1108 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 1167 Query: 369 gtgggatgtcaaaatgcatcggta-ggggagcgttccgccttagagggaagcaaccgc 425 ||||||||| |||| |||| ||| ||| ||||||||| |||| |||||||| |||| Sbjct: 1168 gtgggatgtaaaaaaacatccgtatgggaagcgttccgtgttagggggaagcatccgc 1225
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 644 bits (325), Expect = 0.0 Identities = 474/521 (90%), Gaps = 2/521 (0%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcgg 67 |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 833 ccgaaatgcgttgaggcgcagcagttgactagactatctaggggtaaagcactgtttcgg 892 Query: 68 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaa 127 ||||||||||| |||||||||||||||||||||||||||||||||| |||| ||| | Sbjct: 893 tgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactggataggactccct 952 Query: 128 aataacaggg-gtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 186 ||||| || | || | |||| |||||||||| ||||||||||||||||| |||||||| Sbjct: 953 aataatagagagtaagggtcaaccagtgagacagtgggggataagcttcattgtcgagag 1012 Query: 187 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 246 || |||||||| ||||||| ||||||||||||||||||||||| |||| |||||||||| Sbjct: 1013 gggaacagcccagatcaccggctaaggcccctaaatgaccgctaagtggtaaaggaggta 1072 Query: 247 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 306 || |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 1073 ggagtgcaaagacagccaggaggtttgcctagaagcagccatccttgaaagagtgcgtaa 1132 Query: 307 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 366 ||||||||||||| ||||| ||||||| ||||||||| ||| ||||||| |||||||||| Sbjct: 1133 tagctcactgatcaagcgctcttgcgccgaagatgaatgggactaagcggtctgccgaag 1192 Query: 367 ctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcg 426 ||||||||||||||||| ||||||||||||||||||||||||||| | |||||| | ||| Sbjct: 1193 ctgtgggatgtcaaaatacatcggtaggggagcgttccgccttagggagaagcaccagcg 1252 Query: 427 aaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtg 486 ||| || || |||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1253 tgagcaggtgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtg 1312 Query: 487 agaatccaatgccccgaaaacccaaggtttcctccgcaagg 527 |||||||||||||||||||||| |||| ||||||||||||| Sbjct: 1313 agaatccaatgccccgaaaacctaagggttcctccgcaagg 1353
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 630 bits (318), Expect = e-177 Identities = 318/318 (100%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 632 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 691 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 692 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 751 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 752 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 811 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 812 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 871 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 872 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 931 Query: 309 gctcactgatcgagcgcc 326 |||||||||||||||||| Sbjct: 932 gctcactgatcgagcgcc 949
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 626 bits (316), Expect = e-176 Identities = 340/348 (97%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122379 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 122320 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 122319 gcgggctgcgcgagcggtaccaaattgaggcaaactctgaatactagatatgacccaaaa 122260 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122259 ataataggattcaaagtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 122200 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 122199 aaacagcctggatcaccagctaaggcccctaaatgaccgctcaatgataaaggaggtggg 122140 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122139 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 122080 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcga 356 ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 122079 gctcactaatcgagcgcccttgcgctgaagatgaacggggctaagcga 122032
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 626 bits (316), Expect = e-176 Identities = 340/348 (97%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824920 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 12824861 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 12824860 gcgggctgcgcgagcggtaccaaattgaggcaaactctgaatactagatatgacccaaaa 12824801 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||| ||| |||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824800 ataataggattcaaagtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 12824741 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 12824740 aaacagcctggatcaccagctaaggcccctaaatgaccgctcaatgataaaggaggtggg 12824681 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12824680 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 12824621 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcga 356 ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 12824620 gctcactaatcgagcgcccttgcgctgaagatgaacggggctaagcga 12824573
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 618 bits (312), Expect = e-174 Identities = 389/415 (93%), Gaps = 6/415 (1%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 847 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 906 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 907 gcgggccgcgagagcagtaccaaatcgaggcaaactctgaatactagatatgacc----- 961 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 | |||||||| ||||||||||| |||||||||||||||||||||||||| || |||||| Sbjct: 962 -tcacaggggttaaggtcggccaatgagacgatgggggataagcttcatcttccagaggg 1020 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1021 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 1080 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1081 ggtgcaaagacagccacgaggtttgcctagaagcagccacccttgaaagagtgcgtaata 1140 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| || |||||||||||||| ||||||||||||||| Sbjct: 1141 gctcactgatcgagcgctcttgcgcccaaaatgaacggggctaaacgatctgccgaagct 1200 Query: 369 gtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaacc 423 ||||||||| ||||||||||||||||||||||||||||| || |||||| ||||| Sbjct: 1201 gtgggatgtaaaaatgcatcggtaggggagcgttccgccctaaagggaaacaacc 1255 Score = 46.1 bits (23), Expect = 0.12 Identities = 29/31 (93%) Strand = Plus / Plus Query: 476 aaacattggtgagaatccaatgccccgaaaa 506 ||||| ||||||||||| ||||||||||||| Sbjct: 1311 aaacaatggtgagaatctaatgccccgaaaa 1341
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 613 bits (309), Expect = e-172 Identities = 371/389 (95%), Gaps = 2/389 (0%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 177670 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcacggtttcggt 177729 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 177730 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 177789 Query: 129 ataacaggggt-caaggtcggccagtgagacgatgggggataagcttcatcgtcgagagg 187 |||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 177790 ataagaggggggcaaggtcggctagtgagacgatgggggataagcttcatcgtcgagagg 177849 Query: 188 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgg 247 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 177850 gaaagagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtag 177909 Query: 248 gggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaat 307 ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 177910 gggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaat 177969 Query: 308 agctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgat-ctgccgaag 366 |||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||| Sbjct: 177970 agctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatcctgccgaag 178029 Query: 367 ctgtgggatgtcaaaatgcatcggtaggg 395 ||||||||||||||||| |||||| |||| Sbjct: 178030 ctgtgggatgtcaaaatacatcggcaggg 178058 Score = 48.1 bits (24), Expect = 0.029 Identities = 51/60 (85%) Strand = Plus / Plus Query: 257 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 316 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 419034 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 419093 Score = 48.1 bits (24), Expect = 0.029 Identities = 51/60 (85%) Strand = Plus / Plus Query: 257 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 316 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 68284 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 68343 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 211 aggcccctaaatgaccgctcag 232 |||||||||||||||||||||| Sbjct: 327554 aggcccctaaatgaccgctcag 327575 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 179 gtcgagagggaaacagcccggatc 202 ||||||||||||||||||| |||| Sbjct: 418956 gtcgagagggaaacagcccagatc 418979 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 179 gtcgagagggaaacagcccggatc 202 ||||||||||||||||||| |||| Sbjct: 68206 gtcgagagggaaacagcccagatc 68229
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 603 bits (304), Expect = e-169 Identities = 467/520 (89%), Gaps = 1/520 (0%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcgg 67 ||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||| Sbjct: 127612 ccgaaatgcgttgaggcgcagcagttgaccggactacctaggggtaaagcactgtttcgg 127553 Query: 68 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaa 127 ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 127552 tgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatactaggtatgacccccg 127493 Query: 128 aataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagg 187 || ||| ||| | |||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 127492 aagaacggggaaaagggtcaaccagtgagacgatgggggataagcttcattgtcgagagg 127433 Query: 188 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgg 247 | |||||||| ||||||||||||||||||||||||||| |||||||| |||||||||| | Sbjct: 127432 ggaacagcccagatcaccagctaaggcccctaaatgactgctcagtggtaaaggaggtag 127373 Query: 248 gggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaat 307 | ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 127372 gagtgcaaagacagccaggaggtttgcctagaagcagccacccttaaaagagtgcgtaat 127313 Query: 308 agctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagc 367 |||||||||||| ||||| ||| ||| ||| ||||||||| ||||| | ||||||||||| Sbjct: 127312 agctcactgatcaagcgctcttacgccgaaaatgaacgggactaagtggtctgccgaagc 127253 Query: 368 tgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcga 427 |||| ||||||||| ||||||||||||||||||||| | ||| |||||| ||| Sbjct: 127252 tgtgagatgtcaaaggacatcggtaggggagcgttccgtatcagaaagaagcactagcgt 127193 Query: 428 aagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtga 487 ||| || || |||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 127192 gagcaggtgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtga 127133 Query: 488 gaatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||| |||| ||||||||||||| Sbjct: 127132 gaatccaatgccccgaaaacctaagggttcctccgcaagg 127093 Score = 603 bits (304), Expect = e-169 Identities = 467/520 (89%), Gaps = 1/520 (0%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcgg 67 ||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||| Sbjct: 95835 ccgaaatgcgttgaggcgcagcagttgaccggactacctaggggtaaagcactgtttcgg 95894 Query: 68 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaa 127 ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 95895 tgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatactaggtatgacccccg 95954 Query: 128 aataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagg 187 || ||| ||| | |||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 95955 aagaacggggaaaagggtcaaccagtgagacgatgggggataagcttcattgtcgagagg 96014 Query: 188 gaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgg 247 | |||||||| ||||||||||||||||||||||||||| |||||||| |||||||||| | Sbjct: 96015 ggaacagcccagatcaccagctaaggcccctaaatgactgctcagtggtaaaggaggtag 96074 Query: 248 gggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaat 307 | ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 96075 gagtgcaaagacagccaggaggtttgcctagaagcagccacccttaaaagagtgcgtaat 96134 Query: 308 agctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagc 367 |||||||||||| ||||| ||| ||| ||| ||||||||| ||||| | ||||||||||| Sbjct: 96135 agctcactgatcaagcgctcttacgccgaaaatgaacgggactaagtggtctgccgaagc 96194 Query: 368 tgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcga 427 |||| ||||||||| ||||||||||||||||||||| | ||| |||||| ||| Sbjct: 96195 tgtgagatgtcaaaggacatcggtaggggagcgttccgtatcagaaagaagcactagcgt 96254 Query: 428 aagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtga 487 ||| || || |||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 96255 gagcaggtgtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtga 96314 Query: 488 gaatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||| |||| ||||||||||||| Sbjct: 96315 gaatccaatgccccgaaaacctaagggttcctccgcaagg 96354
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 589 bits (297), Expect = e-165 Identities = 370/393 (94%), Gaps = 1/393 (0%) Strand = Plus / Plus Query: 136 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 194 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 195 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 254 ||| |||||||||||||||||||||||||| |||||||||||||||||||| || ||||| Sbjct: 5505 cccagatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgca 5564 Query: 255 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 314 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 5565 gagacagccaggaggtttgcctagaagcagccacccttcaaagagtgcgtaatagctcac 5624 Query: 315 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 374 ||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 5625 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatttgccgaagctgtggga 5684 Query: 375 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 434 ||| |||||| ||||||||||||||||||||||||||| |||| | ||||| ||| || Sbjct: 5685 tgtaaaaatgaatcggtaggggagcgttccgccttagaaagaagtacccgcgcgagcagg 5744 Query: 435 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 494 | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5745 gttggacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 5804 Query: 495 atgccccgaaaacccaaggtttcctccgcaagg 527 |||||||||||||| |||| ||||||||||||| Sbjct: 5805 atgccccgaaaacctaaggattcctccgcaagg 5837 Score = 206 bits (104), Expect = 5e-50 Identities = 113/116 (97%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5325 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggc 5384 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 124 |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5385 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 5440
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 589 bits (297), Expect = e-165 Identities = 370/393 (94%), Gaps = 1/393 (0%) Strand = Plus / Plus Query: 136 gggtcaaggtcggccagtgagacgatgggggataagcttcatc-gtcgagagggaaacag 194 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5445 gggtcaaggtcggccagtgagacgatgggggataagcttcatctgtcgagagggaaacag 5504 Query: 195 cccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgca 254 ||| |||||||||||||||||||||||||| |||||||||||||||||||| || ||||| Sbjct: 5505 cccagatcaccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgca 5564 Query: 255 aagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcac 314 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 5565 gagacagccaggaggtttgcctagaagcagccacccttcaaagagtgcgtaatagctcac 5624 Query: 315 tgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 374 ||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 5625 tgatcgagcgctcttgcgccgaagatgaacggggctaagcgatttgccgaagctgtggga 5684 Query: 375 tgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcggg 434 ||| |||||| ||||||||||||||||||||||||||| |||| | ||||| ||| || Sbjct: 5685 tgtaaaaatgaatcggtaggggagcgttccgccttagaaagaagtacccgcgcgagcagg 5744 Query: 435 ggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 494 | | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5745 gttggacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcca 5804 Query: 495 atgccccgaaaacccaaggtttcctccgcaagg 527 |||||||||||||| |||| ||||||||||||| Sbjct: 5805 atgccccgaaaacctaaggattcctccgcaagg 5837 Score = 206 bits (104), Expect = 5e-50 Identities = 113/116 (97%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5325 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggc 5384 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 124 |||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5385 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgaccc 5440
>gb|AY848693.1| Vitis pseudoreticulata clone EST-4 23S ribosomal RNA, partial sequence; chloroplast Length = 673 Score = 583 bits (294), Expect = e-163 Identities = 349/368 (94%), Gaps = 7/368 (1%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 312 ccgaaatgcgttgaggcgcagcggttgactggacatctaggggtaaagcactgtttcggt 371 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||| || || ||| Sbjct: 372 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatctggcctcaaa 431 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 432 a-------ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 484 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 485 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 544 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 545 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 604 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 605 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgccgaagct 664 Query: 369 gtgggatg 376 |||||||| Sbjct: 665 gtgggatg 672
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 579 bits (292), Expect = e-162 Identities = 361/384 (94%) Strand = Plus / Plus Query: 144 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 203 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 5182 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 5241 Query: 204 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 263 ||||||||||||||||||||| |||||||||||||||||||| || ||||| |||||||| Sbjct: 5242 ccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgcagagacagcc 5301 Query: 264 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 323 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 5302 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 5361 Query: 324 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 383 || ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 5362 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatctaaaaat 5421 Query: 384 gcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacga 443 | ||||||||||||||||||||||||||| |||| | ||||| ||| ||| | ||||| Sbjct: 5422 gaatcggtaggggagcgttccgccttagaacgaagtacccgcgcgagcagggttggacga 5481 Query: 444 agcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccga 503 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 5482 agcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccga 5541 Query: 504 aaacccaaggtttcctccgcaagg 527 ||||| |||| ||||||||||||| Sbjct: 5542 aaacctaagggttcctccgcaagg 5565 Score = 196 bits (99), Expect = 5e-47 Identities = 108/111 (97%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5057 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggc 5116 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatat 119 |||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 5117 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatat 5167
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 579 bits (292), Expect = e-162 Identities = 361/384 (94%) Strand = Plus / Minus Query: 144 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatca 203 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 22743 gtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccagatca 22684 Query: 204 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcc 263 ||||||||||||||||||||| |||||||||||||||||||| || ||||| |||||||| Sbjct: 22683 ccagctaaggcccctaaatgatcgctcagtgataaaggaggtaggagtgcagagacagcc 22624 Query: 264 aggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagc 323 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 22623 aggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagc 22564 Query: 324 gcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 383 || ||||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 22563 gctcttgcgccgaagatgaacggggctaagcgatctgccgaagctgtgggatctaaaaat 22504 Query: 384 gcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacga 443 | ||||||||||||||||||||||||||| |||| | ||||| ||| ||| | ||||| Sbjct: 22503 gaatcggtaggggagcgttccgccttagaacgaagtacccgcgcgagcagggttggacga 22444 Query: 444 agcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccga 503 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 22443 agcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccga 22384 Query: 504 aaacccaaggtttcctccgcaagg 527 ||||| |||| ||||||||||||| Sbjct: 22383 aaacctaagggttcctccgcaagg 22360 Score = 196 bits (99), Expect = 5e-47 Identities = 108/111 (97%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22868 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggc 22809 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatat 119 |||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 22808 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatat 22758
>dbj|AK105692.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-C06, full insert sequence Length = 2509 Score = 579 bits (292), Expect = e-162 Identities = 292/292 (100%) Strand = Plus / Plus Query: 236 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 295 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 60 Query: 296 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 120 Query: 356 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagaggg 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 atctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagaggg 180 Query: 416 aagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacga 475 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 aagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacga 240 Query: 476 aaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 527 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 aaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 292
>gb|DQ176643.1| Vitis pseudoreticulata clone EST-423 23S ribosomal RNA, partial sequence; chloroplast Length = 674 Score = 555 bits (280), Expect = e-155 Identities = 335/354 (94%), Gaps = 7/354 (1%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 328 ccgaaatgcgttgaggcgcagcggttgactggacatctaggggtaaagcactgtttcggt 387 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||| || || ||| Sbjct: 388 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatctggcctcaaa 447 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 448 a-------ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 500 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 501 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 560 Query: 249 ggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaata 308 |||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 561 ggtgcagagacagccaggaggtttgcctagaagcagccacccttgaaagagtgcgtaata 620 Query: 309 gctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgcc 362 ||||||||||||||||| ||||||| |||||||||||||||||||||||||||| Sbjct: 621 gctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgcc 674
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 549 bits (277), Expect = e-153 Identities = 358/385 (92%) Strand = Plus / Plus Query: 143 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 202 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 4858 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 4917 Query: 203 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 262 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 4918 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 4977 Query: 263 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 322 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 4978 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 5037 Query: 323 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 382 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 5038 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 5097 Query: 383 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 442 | |||||||||||||||||||||||||||||||||||| | ||| ||| || || |||| Sbjct: 5098 tacatcggtaggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacg 5157 Query: 443 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 502 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 5158 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 5217 Query: 503 aaaacccaaggtttcctccgcaagg 527 |||||| |||| ||||||||||||| Sbjct: 5218 aaaacctaagggttcctccgcaagg 5242 Score = 192 bits (97), Expect = 8e-46 Identities = 110/113 (97%), Gaps = 1/113 (0%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcgg 67 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 4718 ccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcgg 4777 Query: 68 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 120 ||||||||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 4778 tgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactaggtatg 4830
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 549 bits (277), Expect = e-153 Identities = 358/385 (92%) Strand = Plus / Plus Query: 143 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 202 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 203 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 262 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1028 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 1087 Query: 263 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 322 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 1088 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 1147 Query: 323 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 382 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 1148 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 1207 Query: 383 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 442 | |||||||||||||||||||||||||||||||||||| | ||| ||| || || |||| Sbjct: 1208 tacatcggtaggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacg 1267 Query: 443 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 502 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1268 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 1327 Query: 503 aaaacccaaggtttcctccgcaagg 527 |||||| |||| ||||||||||||| Sbjct: 1328 aaaacctaagggttcctccgcaagg 1352 Score = 192 bits (97), Expect = 8e-46 Identities = 110/113 (97%), Gaps = 1/113 (0%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcgg 67 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 828 ccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcgg 887 Query: 68 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 120 ||||||||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 888 tgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactaggtatg 940
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 549 bits (277), Expect = e-153 Identities = 358/385 (92%) Strand = Plus / Minus Query: 143 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 202 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 150277 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 150218 Query: 203 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 262 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 150217 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 150158 Query: 263 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 322 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 150157 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 150098 Query: 323 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 382 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 150097 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 150038 Query: 383 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 442 | |||||||||||||||||||||||||||||||||||| | ||| ||| || || |||| Sbjct: 150037 tacatcggtaggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacg 149978 Query: 443 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 502 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 149977 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 149918 Query: 503 aaaacccaaggtttcctccgcaagg 527 |||||| |||| ||||||||||||| Sbjct: 149917 aaaacctaagggttcctccgcaagg 149893 Score = 549 bits (277), Expect = e-153 Identities = 358/385 (92%) Strand = Plus / Plus Query: 143 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 202 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 118389 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 118448 Query: 203 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 262 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 118449 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 118508 Query: 263 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 322 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 118509 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 118568 Query: 323 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 382 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 118569 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 118628 Query: 383 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 442 | |||||||||||||||||||||||||||||||||||| | ||| ||| || || |||| Sbjct: 118629 tacatcggtaggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacg 118688 Query: 443 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 502 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 118689 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 118748 Query: 503 aaaacccaaggtttcctccgcaagg 527 |||||| |||| ||||||||||||| Sbjct: 118749 aaaacctaagggttcctccgcaagg 118773 Score = 192 bits (97), Expect = 8e-46 Identities = 110/113 (97%), Gaps = 1/113 (0%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcgg 67 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 150417 ccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcgg 150358 Query: 68 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 120 ||||||||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 150357 tgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactaggtatg 150305 Score = 192 bits (97), Expect = 8e-46 Identities = 110/113 (97%), Gaps = 1/113 (0%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcgg 67 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 118249 ccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcgg 118308 Query: 68 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 120 ||||||||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 118309 tgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactaggtatg 118361
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 549 bits (277), Expect = e-153 Identities = 358/385 (92%) Strand = Plus / Plus Query: 143 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 202 |||| |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||| Sbjct: 968 ggtcagccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatc 1027 Query: 203 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 262 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1028 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaagagtgcaaagacagc 1087 Query: 263 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 322 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 1088 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 1147 Query: 323 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 382 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||| ||| Sbjct: 1148 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaa 1207 Query: 383 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 442 | |||||||||||||||||||||||||||||||||||| | ||| ||| || || |||| Sbjct: 1208 tacatcggtaggggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacg 1267 Query: 443 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 502 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1268 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 1327 Query: 503 aaaacccaaggtttcctccgcaagg 527 |||||| |||| ||||||||||||| Sbjct: 1328 aaaacctaagggttcctccgcaagg 1352 Score = 192 bits (97), Expect = 8e-46 Identities = 110/113 (97%), Gaps = 1/113 (0%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcgg 67 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 828 ccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcgg 887 Query: 68 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 120 ||||||||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 888 tgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactaggtatg 940
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 547 bits (276), Expect = e-152 Identities = 441/496 (88%) Strand = Plus / Minus Query: 11 gaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggtgc 70 ||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 2992 gaaatgcattgaagcgcagcagttgactggacatctaggagtaaagcactgtttcggtgc 2933 Query: 71 gggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaaat 130 |||| | |||| ||||||||| ||||||||||||||||| |||||| || | ||||| Sbjct: 2932 gggcaatgagagcagtaccaaattgaggcaaactctgaatattagatacgatctcaaaat 2873 Query: 131 aacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaa 190 ||| |||||||||||||| |||||||||| | ||||||||||||||||||||||||||| Sbjct: 2872 cacaagggtcaaggtcggcgagtgagacgacgagggataagcttcatcgtcgagagggaa 2813 Query: 191 acagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggggg 250 ||| || |||||||||||||||||||||||||||| ||||||||||||||||||| |||| Sbjct: 2812 acaacctggatcaccagctaaggcccctaaatgactgctcagtgataaaggaggtagggg 2753 Query: 251 tgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagc 310 ||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||| Sbjct: 2752 tgcaaagacagccaggaggtttgcctagaagcaaccacccttgaaaaagtgcgtaatagc 2693 Query: 311 tcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgt 370 ||||| ||||||||| ||||| | |||||||| ||||||||||||||| |||||| | Sbjct: 2692 tcactaatcgagcgcacttgcaccaaagatgaattgggctaagcgatctgttgaagctat 2633 Query: 371 gggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaag 430 ||||||||||||||||||| |||||||||||||||||||||||||||||| | || || Sbjct: 2632 gggatgtcaaaatgcatcgataggggagcgttccgccttagagggaagcacctgcacgag 2573 Query: 431 cgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaa 490 | ||| || || ||||||||| |||||||||||| ||| | ||||||||||||||| Sbjct: 2572 tagtggtggaagaggcggaagcgggaatgtcggcttttttaaggcaaacattggtgagaa 2513 Query: 491 tccaatgccccgaaaa 506 |||||||||| ||||| Sbjct: 2512 tccaatgccctgaaaa 2497
>gb|AF322910.1|AF322910 Vigna radiata 23S ribosomal RNA, partial sequence; chloroplast gene for chloroplast product Length = 1041 Score = 541 bits (273), Expect = e-151 Identities = 340/361 (94%), Gaps = 1/361 (0%) Strand = Plus / Plus Query: 167 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 ataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgacc 316 Query: 227 gctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagcc 286 ||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||| Sbjct: 317 gctcagtgataaaggaggtaggggtgcagagacaaccaggaggtttgcctagaagcagcc 376 Query: 287 accctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgg 346 |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||| Sbjct: 377 acccttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacgg 436 Query: 347 ggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 406 |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| Sbjct: 437 ggctaagcgatctgccgaagctgtgggatgtcaaaatgaatcggtagggga-cgttccgc 495 Query: 407 cttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggctt 466 ||||| |||||| | ||||| ||| | | | |||||||||||||||||||||||||||| Sbjct: 496 cttagggggaaggacccgcgcgagcagtgctggacgaagcggaagcgagaatgtcggctt 555 Query: 467 gagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaag 526 |||||||| |||| ||||||||||||||||||| ||||||||||||| |||||||||||| Sbjct: 556 gagtaacgcaaacgttggtgagaatccaatgcctcgaaaacccaagggttcctccgcaag 615 Query: 527 g 527 | Sbjct: 616 g 616
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 529 bits (267), Expect = e-147 Identities = 465/527 (88%), Gaps = 8/527 (1%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcgg 67 |||||||||||||||||||||| ||||||| | | | || | |||||||||||||| ||| Sbjct: 138439 ccgaaatgcgttgaggcgcagcggttgactaggctacctggaggtaaagcactgttacgg 138380 Query: 68 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaa 127 ||||||||||| |||| |||||||| |||||||||||||||||||| | |||| ||| | Sbjct: 138379 tgcgggctgcgagagcagtaccaaaccgaggcaaactctgaatactgggtatggccccag 138320 Query: 128 aataacagg--ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgaga 185 | | ||| | ||| ||||||||||||||||||| |||||||||||||||| |||||||| Sbjct: 138319 agtcacacgagggtgaaggtcggccagtgagacggtgggggataagcttcaccgtcgaga 138260 Query: 186 gggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggt 245 ||| |||||||| |||||||||||||||||||| ||||||||||||||| | |||||||| Sbjct: 138259 ggggaacagcccagatcaccagctaaggcccctgaatgaccgctcagtggtgaaggaggt 138200 Query: 246 gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgta 305 || |||||||||||||| ||||||||||| |||||||||||||||| |||||||||||| Sbjct: 138199 aggagtgcaaagacagccgggaggtttgcccagaagcagccacccttgaaagagtgcgta 138140 Query: 306 atagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaa 365 ||||||||||||| ||||| | ||||| || |||||||||| ||||||| ||||||||| Sbjct: 138139 gtagctcactgatcaagcgctcctgcgccgaggatgaacgggactaagcggtctgccgaa 138080 Query: 366 gctgtgggatgtc--aaaatgcatcggtaggggagcgttccgcct---tagagggaagca 420 ||||||||||||| | ||| |||||||||||||||||||||||| |||||||||| Sbjct: 138079 gctgtgggatgtcgaacaatacatcggtaggggagcgttccgcctcggaggagggaagca 138020 Query: 421 accgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaaca 480 | ||| ||| || | |||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 138019 ccagcgcgagcaggtgcggacgaagcggaagcgagagtgtcggcttgagtaacgcaaaca 137960 Query: 481 ttggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 137959 ttggtgagaatccaatgccccgaaaacccaagggttcctccgcaagg 137913 Score = 529 bits (267), Expect = e-147 Identities = 465/527 (88%), Gaps = 8/527 (1%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcgg 67 |||||||||||||||||||||| ||||||| | | | || | |||||||||||||| ||| Sbjct: 83438 ccgaaatgcgttgaggcgcagcggttgactaggctacctggaggtaaagcactgttacgg 83497 Query: 68 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaa 127 ||||||||||| |||| |||||||| |||||||||||||||||||| | |||| ||| | Sbjct: 83498 tgcgggctgcgagagcagtaccaaaccgaggcaaactctgaatactgggtatggccccag 83557 Query: 128 aataacagg--ggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgaga 185 | | ||| | ||| ||||||||||||||||||| |||||||||||||||| |||||||| Sbjct: 83558 agtcacacgagggtgaaggtcggccagtgagacggtgggggataagcttcaccgtcgaga 83617 Query: 186 gggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggt 245 ||| |||||||| |||||||||||||||||||| ||||||||||||||| | |||||||| Sbjct: 83618 ggggaacagcccagatcaccagctaaggcccctgaatgaccgctcagtggtgaaggaggt 83677 Query: 246 gggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgta 305 || |||||||||||||| ||||||||||| |||||||||||||||| |||||||||||| Sbjct: 83678 aggagtgcaaagacagccgggaggtttgcccagaagcagccacccttgaaagagtgcgta 83737 Query: 306 atagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaa 365 ||||||||||||| ||||| | ||||| || |||||||||| ||||||| ||||||||| Sbjct: 83738 gtagctcactgatcaagcgctcctgcgccgaggatgaacgggactaagcggtctgccgaa 83797 Query: 366 gctgtgggatgtc--aaaatgcatcggtaggggagcgttccgcct---tagagggaagca 420 ||||||||||||| | ||| |||||||||||||||||||||||| |||||||||| Sbjct: 83798 gctgtgggatgtcgaacaatacatcggtaggggagcgttccgcctcggaggagggaagca 83857 Query: 421 accgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaaca 480 | ||| ||| || | |||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 83858 ccagcgcgagcaggtgcggacgaagcggaagcgagagtgtcggcttgagtaacgcaaaca 83917 Query: 481 ttggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 83918 ttggtgagaatccaatgccccgaaaacccaagggttcctccgcaagg 83964
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 521 bits (263), Expect = e-145 Identities = 350/379 (92%) Strand = Plus / Plus Query: 149 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 208 |||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 144899 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagc 144958 Query: 209 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 268 |||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||| Sbjct: 144959 taaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggag 145018 Query: 269 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 328 |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| || Sbjct: 145019 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctct 145078 Query: 329 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 388 ||||| |||||||| |||| ||||||| |||||||||||||||||||||||||| |||| Sbjct: 145079 tgcgccgaagatgagcgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatc 145138 Query: 389 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 448 ||||||||||||||||||| ||| ||||||| | | | ||| || || |||||||||| Sbjct: 145139 ggtaggggagcgttccgccccagatggaagcaccagtgcgagcaggtgtggacgaagcgg 145198 Query: 449 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145199 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 145258 Query: 509 caaggtttcctccgcaagg 527 |||| ||||||||||||| Sbjct: 145259 taagggttcctccgcaagg 145277 Score = 521 bits (263), Expect = e-145 Identities = 350/379 (92%) Strand = Plus / Minus Query: 149 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 208 |||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||| Sbjct: 87952 ccagtgagacgatgagggataagcttcaccgtcgagaggggaacagcccagatcaccagc 87893 Query: 209 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 268 |||||||||||||||||||||||||| |||||||||| || ||||||||||||||||||| Sbjct: 87892 taaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagccaggag 87833 Query: 269 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 328 |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| || Sbjct: 87832 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctct 87773 Query: 329 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 388 ||||| |||||||| |||| ||||||| |||||||||||||||||||||||||| |||| Sbjct: 87772 tgcgccgaagatgagcgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatc 87713 Query: 389 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 448 ||||||||||||||||||| ||| ||||||| | | | ||| || || |||||||||| Sbjct: 87712 ggtaggggagcgttccgccccagatggaagcaccagtgcgagcaggtgtggacgaagcgg 87653 Query: 449 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 508 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 87652 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 87593 Query: 509 caaggtttcctccgcaagg 527 |||| ||||||||||||| Sbjct: 87592 taagggttcctccgcaagg 87574 Score = 170 bits (86), Expect = 3e-39 Identities = 105/110 (95%), Gaps = 1/110 (0%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcgg 67 |||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||| ||| Sbjct: 144751 ccgaaatgcgttgaggcgcagcagttgactagaccatctaggggtaaagcaccgttccgg 144810 Query: 68 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 117 ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 144811 tgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactagat 144860 Score = 170 bits (86), Expect = 3e-39 Identities = 105/110 (95%), Gaps = 1/110 (0%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcgg 67 |||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||| ||| Sbjct: 88100 ccgaaatgcgttgaggcgcagcagttgactagaccatctaggggtaaagcaccgttccgg 88041 Query: 68 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 117 ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 88040 tgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactagat 87991
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 517 bits (261), Expect = e-143 Identities = 355/385 (92%), Gaps = 1/385 (0%) Strand = Plus / Minus Query: 143 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 202 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 115246 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 115187 Query: 203 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 262 |||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||| Sbjct: 115186 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagc 115127 Query: 263 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 322 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 115126 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 115067 Query: 323 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 382 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||||||| Sbjct: 115066 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaaaa 115007 Query: 383 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 442 | ||||||||||||||||||||||||||| | ||||| | | || ||| || || |||| Sbjct: 115006 tacatcggtaggggagcgttccgccttagggagaagc-atcacgtgagcaggtgtggacg 114948 Query: 443 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 502 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 114947 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 114888 Query: 503 aaaacccaaggtttcctccgcaagg 527 |||||| |||| ||||||||||||| Sbjct: 114887 aaaacctaagggttcctccgcaagg 114863 Score = 517 bits (261), Expect = e-143 Identities = 355/385 (92%), Gaps = 1/385 (0%) Strand = Plus / Plus Query: 143 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 202 |||| ||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct: 86874 ggtcagccagtgagacagtgggggataagcttcattgtcgagaggggaacagcccagatc 86933 Query: 203 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 262 |||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||| Sbjct: 86934 accagctaaggcccctaaatgaccgctcagtggtaaaggaggtaggagtgcaaagacagc 86993 Query: 263 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 322 |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 86994 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaag 87053 Query: 323 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 382 ||| ||||||| ||||||||| ||| ||||||| |||||||||||||||||||||||||| Sbjct: 87054 cgctcttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaaaa 87113 Query: 383 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 442 | ||||||||||||||||||||||||||| | ||||| | | || ||| || || |||| Sbjct: 87114 tacatcggtaggggagcgttccgccttagggagaagc-atcacgtgagcaggtgtggacg 87172 Query: 443 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 502 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 87173 aagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 87232 Query: 503 aaaacccaaggtttcctccgcaagg 527 |||||| |||| ||||||||||||| Sbjct: 87233 aaaacctaagggttcctccgcaagg 87257 Score = 190 bits (96), Expect = 3e-45 Identities = 106/108 (98%), Gaps = 1/108 (0%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcgg 67 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 115382 ccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcgg 115323 Query: 68 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 115 ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 115322 tgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactag 115275 Score = 190 bits (96), Expect = 3e-45 Identities = 106/108 (98%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcgg 67 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 86738 ccgaaatgcgttgaggcgcagcagttgactggactatctaggggtaaagcactgtttcgg 86797 Query: 68 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 115 ||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 86798 tgcgggctgcgagagcggtaccaaatcgaggcaaactctgaatactag 86845
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 513 bits (259), Expect = e-142 Identities = 349/379 (92%) Strand = Plus / Plus Query: 149 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 208 |||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||| Sbjct: 955 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcaccagc 1014 Query: 209 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 268 ||||||||||||||||||||| |||| | |||||||| |||||||||||||||||||||| Sbjct: 1015 taaggcccctaaatgaccgctaagtggtgaaggaggtaggggtgcaaagacagccaggag 1074 Query: 269 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 328 ||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| || Sbjct: 1075 gtttgcctagaagcagccatccttgaaagagtgcgtaatagctcactgatcaagcgctct 1134 Query: 329 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 388 ||||| ||||||||| ||| ||||||| ||||||||||||||||||||||||||| |||| Sbjct: 1135 tgcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaaaatacatc 1194 Query: 389 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 448 ||||||||||||||||||||||||| ||||| | ||| ||| || || |||||||||| Sbjct: 1195 ggtaggggagcgttccgccttagagagaagcgccagcgtgagcaggtgtggacgaagcgg 1254 Query: 449 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 508 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1255 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 1314 Query: 509 caaggtttcctccgcaagg 527 |||| |||||| |||||| Sbjct: 1315 taagggttcctctgcaagg 1333 Score = 172 bits (87), Expect = 7e-40 Identities = 106/111 (95%), Gaps = 1/111 (0%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcgg 67 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| Sbjct: 815 ccgaaatgcgttgaggcgcaacagttgactggactatctaggggtaaagcactgtttcgg 874 Query: 68 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagata 118 ||||||| ||| |||||||||||||||||||||||||||||||||| |||| Sbjct: 875 tgcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactggata 925
>gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genomic sequence, complete sequence Length = 138345 Score = 511 bits (258), Expect = e-142 Identities = 264/266 (99%) Strand = Plus / Minus Query: 262 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 321 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20870 ccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcga 20811 Query: 322 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 381 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20810 gcgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa 20751 Query: 382 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 441 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20750 atgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgac 20691 Query: 442 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 501 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20690 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccct 20631 Query: 502 gaaaacccaaggtttcctccgcaagg 527 |||||||||||||||||||| ||||| Sbjct: 20630 gaaaacccaaggtttcctccacaagg 20605
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 478 bits (241), Expect = e-132 Identities = 349/385 (90%) Strand = Plus / Minus Query: 143 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 202 |||| ||||||||||||||| |||||||||||||||||| |||||| |||||||| ||| Sbjct: 5602 ggtcagccagtgagacgatgagggataagcttcatcgtcaagaggggaacagcccagatt 5543 Query: 203 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 262 ||||| |||||||||||||||||||||||||||| ||||| || | ||||||||||||| Sbjct: 5542 accagataaggcccctaaatgaccgctcagtgatgaaggatgtatgagtgcaaagacagc 5483 Query: 263 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 322 |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 5482 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagcttactgatcgag 5423 Query: 323 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa 382 ||| ||||| | ||||||||||||| ||||||||||||||||||||||||||| || ||| Sbjct: 5422 cgctcttgcaccgaagatgaacgggactaagcgatctgccgaagctgtgggatatctaaa 5363 Query: 383 tgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacg 442 ||||||||||||||||||||| | |||| |||||| ||||| ||| || || |||| Sbjct: 5362 aacatcggtaggggagcgttccgtttcagagagaagcacccgcgcgagcaggtgtggacg 5303 Query: 443 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 502 ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 5302 aagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 5243 Query: 503 aaaacccaaggtttcctccgcaagg 527 |||||| |||| ||||||||||||| Sbjct: 5242 aaaacctaagggttcctccgcaagg 5218 Score = 121 bits (61), Expect = 2e-24 Identities = 101/113 (89%), Gaps = 1/113 (0%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgactgga-catctaggggtaaagcactgtttcgg 67 ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| Sbjct: 5719 ccgaaatgcgttgaggcgcagcagttgactggaccgtctaggggtaaagcactgtttcgg 5660 Query: 68 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 120 | ||| | | |||||||| | ||||||||||||| ||||||||||||||| Sbjct: 5659 tataggccgtgtaagcggtacgacatcgaggcaaactatgaatactagatatg 5607
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 478 bits (241), Expect = e-132 Identities = 347/382 (90%), Gaps = 4/382 (1%) Strand = Plus / Plus Query: 150 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 209 |||||||||| ||||||||||||||||||||| | ||||||||||||| |||||| |||| Sbjct: 912 cagtgagacggtgggggataagcttcatcgtcaaaagggaaacagcccagatcactagct 971 Query: 210 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 269 |||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct: 972 aaggccccaaaatgaccgctcagtgataaaggaggtgggagtgcaaagacatccaggagg 1031 Query: 270 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 329 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 1032 tttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctctt 1091 Query: 330 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc----aaaatgc 385 |||| ||||||||| ||| ||||||| |||||||||||||||||||||| | || Sbjct: 1092 gcgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgtctattataagat 1151 Query: 386 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 445 ||||||||||||||||||||||||||| |||||| ||| |||| | || ||||||| Sbjct: 1152 atcggtaggggagcgttccgccttagatagaagcattagcgtaagcagatgtggacgaag 1211 Query: 446 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 505 |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1212 cggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaa 1271 Query: 506 acccaaggtttcctccgcaagg 527 |||||||| ||||||||||||| Sbjct: 1272 acccaagggttcctccgcaagg 1293 Score = 145 bits (73), Expect = 2e-31 Identities = 104/113 (92%), Gaps = 1/113 (0%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatct-aggggtaaagcactgtttcgg 67 |||||||||||||||||||||| |||| ||||| || ||||||||||||||||||||| Sbjct: 784 ccgaaatgcgttgaggcgcagcgattgattggactacttaggggtaaagcactgtttcgg 843 Query: 68 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 120 ||||||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 844 tgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatactaggtatg 896
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 476 bits (240), Expect = e-131 Identities = 351/387 (90%), Gaps = 2/387 (0%) Strand = Plus / Plus Query: 143 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 202 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct: 946 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1005 Query: 203 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 262 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1006 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1065 Query: 263 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 322 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1066 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 1125 Query: 323 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aa 380 ||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 1126 cgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtccgtt 1185 Query: 381 aatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcga 440 | ||||||||||||||||||||||| || | |||||| | | | || | || || || Sbjct: 1186 agggcatcggtaggggagcgttccgcaaaagggagaagcatcagtgcaaacaggtgtgga 1245 Query: 441 cgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccc 500 ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1246 cgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccc 1305 Query: 501 cgaaaacccaaggtttcctccgcaagg 527 ||||||||||||| ||||||||||||| Sbjct: 1306 cgaaaacccaagggttcctccgcaagg 1332 Score = 159 bits (80), Expect = 1e-35 Identities = 102/108 (94%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatc-taggggtaaagcactgtttcgg 67 |||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||| Sbjct: 828 ccgaaatgcgttgaggcgcagcggttgactggactgcctaggggtaaagcactgtttcgg 887 Query: 68 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 115 ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 888 tgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatactag 935
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 476 bits (240), Expect = e-131 Identities = 351/387 (90%), Gaps = 2/387 (0%) Strand = Plus / Plus Query: 143 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 202 |||| |||||| ||||| ||||||||||||||||||||||||||||||||||||| || | Sbjct: 959 ggtcagccagtaagacggtgggggataagcttcatcgtcgagagggaaacagcccagacc 1018 Query: 203 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 262 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1019 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1078 Query: 263 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 322 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1079 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 1138 Query: 323 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aa 380 ||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 1139 cgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtccgtt 1198 Query: 381 aatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcga 440 | ||||||||||||||||||||||| || | |||||| | | | || | || || || Sbjct: 1199 agggcatcggtaggggagcgttccgcaaaagggagaagcatcagtgcaaacaggtgtgga 1258 Query: 441 cgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccc 500 ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1259 cgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccc 1318 Query: 501 cgaaaacccaaggtttcctccgcaagg 527 ||||||||||||| ||||||||||||| Sbjct: 1319 cgaaaacccaagggttcctccgcaagg 1345 Score = 159 bits (80), Expect = 1e-35 Identities = 102/108 (94%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatc-taggggtaaagcactgtttcgg 67 |||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||| Sbjct: 841 ccgaaatgcgttgaggcgcagcggttgactggactgcctaggggtaaagcactgtttcgg 900 Query: 68 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 115 ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 901 tgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatactag 948
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 474 bits (239), Expect = e-130 Identities = 347/382 (90%), Gaps = 2/382 (0%) Strand = Plus / Plus Query: 148 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 207 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 953 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 1012 Query: 208 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 267 ||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||||| Sbjct: 1013 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccagga 1072 Query: 268 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 327 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 1073 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctc 1132 Query: 328 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtc--aaaatgc 385 |||||| ||||||||||||| ||||||| |||||||||||||||||||||| |||| | Sbjct: 1133 ttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaaaagac 1192 Query: 386 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 445 |||||||||||||||||| || ||| | |||||| |||||||| | || ||||||| Sbjct: 1193 atcggtaggggagcgttctgctgtagggagaagcattagcgaaagcagatgtggacgaag 1252 Query: 446 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 505 |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1253 cggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaa 1312 Query: 506 acccaaggtttcctccgcaagg 527 ||| |||| ||||||||||||| Sbjct: 1313 acctaagggttcctccgcaagg 1334 Score = 135 bits (68), Expect = 2e-28 Identities = 99/108 (91%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatc-taggggtaaagcactgtttcgg 67 |||||||||||||||||||||| ||| | ||| | | |||||||||||||||||||||| Sbjct: 829 ccgaaatgcgttgaggcgcagcggttaattgggctgcctaggggtaaagcactgtttcgg 888 Query: 68 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 115 ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 889 tgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatactag 936
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 474 bits (239), Expect = e-130 Identities = 242/243 (99%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 742 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 801 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 802 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 861 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 862 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 921 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtggg 248 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 922 aaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtagg 981 Query: 249 ggt 251 ||| Sbjct: 982 ggt 984
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 468 bits (236), Expect = e-129 Identities = 350/387 (90%), Gaps = 2/387 (0%) Strand = Plus / Plus Query: 143 ggtcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatc 202 |||| |||||| ||||| ||||||||||||||||||||| ||||||||||||||| || | Sbjct: 1063 ggtcagccagtaagacggtgggggataagcttcatcgtcaagagggaaacagcccagacc 1122 Query: 203 accagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagc 262 |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||| Sbjct: 1123 accagctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagc 1182 Query: 263 caggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgag 322 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1183 caggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgag 1242 Query: 323 cgcccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaa-- 380 ||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| | Sbjct: 1243 cgctcttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtccatt 1302 Query: 381 aatgcatcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcga 440 | ||||||||||||||||||||||| | | |||||| | | | || | || || || Sbjct: 1303 agggcatcggtaggggagcgttccgcaaacgggagaagcatcagtgtaaacaggtgtgga 1362 Query: 441 cgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccc 500 ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1363 cgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccc 1422 Query: 501 cgaaaacccaaggtttcctccgcaagg 527 ||||||||||||| ||||||||||||| Sbjct: 1423 cgaaaacccaagggttcctccgcaagg 1449 Score = 159 bits (80), Expect = 1e-35 Identities = 102/108 (94%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatc-taggggtaaagcactgtttcgg 67 |||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||| Sbjct: 945 ccgaaatgcgttgaggcgcagcggttgactggactgcctaggggtaaagcactgtttcgg 1004 Query: 68 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 115 ||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1005 tgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatactag 1052
>dbj|AK058658.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-F10, full insert sequence Length = 1383 Score = 468 bits (236), Expect = e-129 Identities = 236/236 (100%) Strand = Plus / Plus Query: 292 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 351 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 ttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggcta 60 Query: 352 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 411 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 120 Query: 412 agggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagta 471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 agggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagta 180 Query: 472 acgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 acgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 236
>gb|DQ481232.1| Populus suaveolens unknown gene Length = 854 Score = 464 bits (234), Expect = e-127 Identities = 284/298 (95%), Gaps = 2/298 (0%) Strand = Plus / Plus Query: 230 cagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccacc 289 |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1 cagtgataaaggaggtaggggtgcagagacagccaggaggtttgcctagaagcagccacc 60 Query: 290 ctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggc 349 ||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| Sbjct: 61 cttgaaagagtgcgtaatagctcactgatcgagcgctcttgcgc-gaagatgaacggggc 119 Query: 350 taagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcctt 409 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || Sbjct: 120 taagcgatctgccgaagctgtgggatgtaaaaatgcatcggtaggggagcgttccgc-tt 178 Query: 410 agagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgag 469 ||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 179 agagggaagcacccgcgcgagcgggggtggacgaagcggaagcgagaatgtcggcttgag 238 Query: 470 taacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 239 taacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcctccgcaagg 296
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 458 bits (231), Expect = e-126 Identities = 345/382 (90%), Gaps = 2/382 (0%) Strand = Plus / Minus Query: 148 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 207 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 124312 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 124253 Query: 208 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 267 ||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||||| Sbjct: 124252 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccagga 124193 Query: 268 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 327 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 124192 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctc 124133 Query: 328 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat--gc 385 |||||| ||||||||||||| ||||||| ||||||||||||||||||||||| | | Sbjct: 124132 ttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcatttttgac 124073 Query: 386 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 445 |||||||||||||||||| || ||| | |||||| |||||||| | || ||||||| Sbjct: 124072 atcggtaggggagcgttctgctgtagggagaagcattagcgaaagcagatgtggacgaag 124013 Query: 446 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 505 |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 124012 cggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaa 123953 Query: 506 acccaaggtttcctccgcaagg 527 ||| |||| ||||||||||||| Sbjct: 123952 acctaagggttcctccgcaagg 123931 Score = 458 bits (231), Expect = e-126 Identities = 345/382 (90%), Gaps = 2/382 (0%) Strand = Plus / Plus Query: 148 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 207 |||||||||||| ||||||||||||||||||||| |||||| |||||||| || |||||| Sbjct: 95554 gccagtgagacggtgggggataagcttcatcgtcaagaggggaacagcccagaccaccag 95613 Query: 208 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 267 ||||||||||||||||||||||||||| |||||||||| | ||||| |||||||||||| Sbjct: 95614 ctaaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcagagacagccagga 95673 Query: 268 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 327 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | Sbjct: 95674 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctc 95733 Query: 328 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat--gc 385 |||||| ||||||||||||| ||||||| ||||||||||||||||||||||| | | Sbjct: 95734 ttgcgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtcatttttgac 95793 Query: 386 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 445 |||||||||||||||||| || ||| | |||||| |||||||| | || ||||||| Sbjct: 95794 atcggtaggggagcgttctgctgtagggagaagcattagcgaaagcagatgtggacgaag 95853 Query: 446 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 505 |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 95854 cggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaa 95913 Query: 506 acccaaggtttcctccgcaagg 527 ||| |||| ||||||||||||| Sbjct: 95914 acctaagggttcctccgcaagg 95935 Score = 127 bits (64), Expect = 4e-26 Identities = 98/108 (90%), Gaps = 1/108 (0%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatc-taggggtaaagcactgtttcgg 67 |||||||||||||||||||||| ||| | ||| | | |||||||||||||||||||||| Sbjct: 124436 ccgaaatgcgttgaggcgcagcggttaattgggctgcctaggggtaaagcactgtttcgg 124377 Query: 68 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 115 ||||||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 124376 tgcgggctgcgaaagcggtaccaaatcgagtcaaactctgaatactag 124329 Score = 127 bits (64), Expect = 4e-26 Identities = 98/108 (90%), Gaps = 1/108 (0%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatc-taggggtaaagcactgtttcgg 67 |||||||||||||||||||||| ||| | ||| | | |||||||||||||||||||||| Sbjct: 95430 ccgaaatgcgttgaggcgcagcggttaattgggctgcctaggggtaaagcactgtttcgg 95489 Query: 68 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 115 ||||||||||| ||||||||||||||||| ||||||||||||||||| Sbjct: 95490 tgcgggctgcgaaagcggtaccaaatcgagtcaaactctgaatactag 95537
>dbj|AK105825.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-E01, full insert sequence Length = 1345 Score = 450 bits (227), Expect = e-123 Identities = 227/227 (100%) Strand = Plus / Plus Query: 301 gcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctg 60 Query: 361 ccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagca 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagca 120 Query: 421 accgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaaca 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 accgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaaca 180 Query: 481 ttggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ttggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 227
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 446 bits (225), Expect = e-122 Identities = 342/381 (89%), Gaps = 5/381 (1%) Strand = Plus / Plus Query: 147 ggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcacca 206 |||||||||||| |||||||||||||||||||||| |||||| |||||||| |||||||| Sbjct: 1000 ggccagtgagaccatgggggataagcttcatcgtcaagaggggaacagcccagatcacca 1059 Query: 207 gctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagg 266 ||||||||||||||||||||||| ||| ||||||||||| |||||||| ||||||||||| Sbjct: 1060 gctaaggcccctaaatgaccgctaagttataaaggaggtaggggtgcatagacagccagg 1119 Query: 267 aggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcc 326 ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 1120 aggtttgcctagaagaagccaccctttaaagagtgcgtaatagctaactgatcgagcgct 1179 Query: 327 cttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgca 386 ||||||| ||| ||||||||| ||||||||| |||||||||||||||||| | || Sbjct: 1180 cttgcgccgaatatgaacgggaataagcgatccgccgaagctgtgggatgtaa-----ca 1234 Query: 387 tcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagc 446 ||||||||||||||||| |||||| ||||||||| | || ||| | ||| || ||||| Sbjct: 1235 tcggtaggggagcgttctgccttatagggaagcacctgcacgagcagtggtggatgaagc 1294 Query: 447 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 506 |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 1295 agaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaa 1354 Query: 507 cccaaggtttcctccgcaagg 527 || |||| ||||| ||||||| Sbjct: 1355 cctaagggttccttcgcaagg 1375 Score = 139 bits (70), Expect = 1e-29 Identities = 104/114 (91%), Gaps = 1/114 (0%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||| ||| ||||||||| || |||||||||||||||||||||||||||||| Sbjct: 845 ccgaaatgcgtttaggggcagcagtt-accggacatctaggggtaaagcactgtttcggt 903 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgac 122 ||||| || |||||||||||||| |||||||||| ||||||||||||||||| Sbjct: 904 gcgggtctcgagagcggtaccaaattgaggcaaactatgaatactagatatgac 957
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 440 bits (222), Expect = e-120 Identities = 360/404 (89%), Gaps = 9/404 (2%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||| |||||||| |||| || ||||||||||||||||||||||||||||| Sbjct: 832 ccgaaatgcgtttaggcgcagaagtt-accagacatctaggggtaaagcactgtttcggt 890 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacc--caa 126 |||| ||| |||| ||||||||| |||||||||| |||||||||||||||||| ||| Sbjct: 891 tcgggtcgcgagagccgtaccaaattgaggcaaactatgaatactagatatgacctccaa 950 Query: 127 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 186 ||||||||||| | ||||| | |||||||||| ||||||||||||||||||||||||||| Sbjct: 951 aaataacagggataaaggtggaccagtgagaccatgggggataagcttcatcgtcgagag 1010 Query: 187 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 246 || |||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||| Sbjct: 1011 gggaacagcccagatcaccagctaaggcccctaaatgaccgctaagttataaaggaggta 1070 Query: 247 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 306 |||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1071 ggggtgcatagacaaccaggaggtttgcctagaagaagccaccctttaaagagtgcgtaa 1130 Query: 307 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 366 ||||| ||||||||||||| ||||||| ||| ||||| ||| ||||||| | ||||||| Sbjct: 1131 tagctaactgatcgagcgctcttgcgccgaatatgaatgggaataagcgacccgccgaag 1190 Query: 367 ctgtgggatgtcaaaatgcatcggtaggggagcgttccgcctta 410 ||||||||||| | |||||||||||||||||| |||||| Sbjct: 1191 ctgtgggatgtaa------atcggtaggggagcgttctgcctta 1228 Score = 123 bits (62), Expect = 6e-25 Identities = 80/86 (93%) Strand = Plus / Plus Query: 442 gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 501 ||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1270 gaagcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgcccc 1329 Query: 502 gaaaacccaaggtttcctccgcaagg 527 ||||||| |||| ||||| ||||||| Sbjct: 1330 gaaaacctaagggttccttcgcaagg 1355
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 440 bits (222), Expect = e-120 Identities = 222/222 (100%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 627 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 686 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 687 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 746 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 747 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 806 Query: 189 aaacagcccggatcaccagctaaggcccctaaatgaccgctc 230 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 807 aaacagcccggatcaccagctaaggcccctaaatgaccgctc 848
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 438 bits (221), Expect = e-120 Identities = 338/377 (89%) Strand = Plus / Plus Query: 151 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 210 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 5005 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 5064 Query: 211 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 270 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| ||| |||| Sbjct: 5065 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagacaatcagtaggt 5124 Query: 271 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 330 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 5125 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctcttg 5184 Query: 331 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 390 ||| ||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||| Sbjct: 5185 cgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtaaaataacatcgg 5244 Query: 391 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 450 |||||||||||||||| ||| | |||||| | | | || | || || |||||||||||| Sbjct: 5245 taggggagcgttccgctctagggagaagcatcagtgtaaacaggtgtggacgaagcggaa 5304 Query: 451 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccca 510 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 5305 gcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaaccta 5364 Query: 511 aggtttcctccgcaagg 527 ||| ||||||||||||| Sbjct: 5365 agggttcctccgcaagg 5381 Score = 131 bits (66), Expect = 3e-27 Identities = 97/106 (91%), Gaps = 1/106 (0%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcgg 67 ||||||||||||||||||||||| || |||| || ||| ||||||||||||||||||||| Sbjct: 4878 ccgaaatgcgttgaggcgcagcaattaactgcactatccaggggtaaagcactgtttcgg 4937 Query: 68 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 113 |||||||| || || |||||||||||||||||||||||||||||| Sbjct: 4938 tgcgggctacgaaagtggtaccaaatcgaggcaaactctgaatact 4983
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 438 bits (221), Expect = e-120 Identities = 338/377 (89%) Strand = Plus / Plus Query: 151 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 210 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 1031 Query: 211 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 270 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| ||| |||| Sbjct: 1032 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagacaatcagtaggt 1091 Query: 271 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 330 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 1092 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctcttg 1151 Query: 331 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 390 ||| ||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||| Sbjct: 1152 cgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtaaaataacatcgg 1211 Query: 391 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 450 |||||||||||||||| ||| | |||||| | | | || | || || |||||||||||| Sbjct: 1212 taggggagcgttccgctctagggagaagcatcagtgtaaacaggtgtggacgaagcggaa 1271 Query: 451 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccca 510 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 1272 gcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaaccta 1331 Query: 511 aggtttcctccgcaagg 527 ||| ||||||||||||| Sbjct: 1332 agggttcctccgcaagg 1348 Score = 131 bits (66), Expect = 3e-27 Identities = 97/106 (91%), Gaps = 1/106 (0%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcgg 67 ||||||||||||||||||||||| || |||| || ||| ||||||||||||||||||||| Sbjct: 845 ccgaaatgcgttgaggcgcagcaattaactgcactatccaggggtaaagcactgtttcgg 904 Query: 68 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 113 |||||||| || || |||||||||||||||||||||||||||||| Sbjct: 905 tgcgggctacgaaagtggtaccaaatcgaggcaaactctgaatact 950
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 430 bits (217), Expect = e-117 Identities = 337/377 (89%) Strand = Plus / Plus Query: 151 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 210 ||||||||| | |||||||||||| |||||| ||||||||||||||| || ||||||||| Sbjct: 967 agtgagacggtaggggataagctttatcgtcaagagggaaacagcccagaccaccagcta 1026 Query: 211 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 270 ||||||||||||| ||||| |||| ||||||||||||| ||||||||||| |||||||| Sbjct: 1027 aggcccctaaatggccgctaagtggtaaaggaggtgggagtgcaaagacaatcaggaggt 1086 Query: 271 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 330 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| || | Sbjct: 1087 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctctcg 1146 Query: 331 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 390 ||| ||||||||| ||| ||||||| |||||||||||||||||||| ||||| |||||| Sbjct: 1147 cgccgaagatgaatgggactaagcggtctgccgaagctgtgggatgctaaaatacatcgg 1206 Query: 391 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 450 |||||||||||||||| ||| | |||||| | | | || | | || |||||||||||| Sbjct: 1207 taggggagcgttccgctctagggagaagcatcagtgtaaacagatgtggacgaagcggaa 1266 Query: 451 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccca 510 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 1267 gcgagaatgtcggcttgagtaacggaaacattggtgagaatccaatgccccgaaaaccta 1326 Query: 511 aggtttcctccgcaagg 527 ||| ||||||||||||| Sbjct: 1327 agggttcctccgcaagg 1343 Score = 149 bits (75), Expect = 1e-32 Identities = 103/111 (92%), Gaps = 1/111 (0%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcgg 67 ||||||||||||||||||||||| || ||||||| ||| ||||||||||||||||||||| Sbjct: 840 ccgaaatgcgttgaggcgcagcaattaactggactatccaggggtaaagcactgtttcgg 899 Query: 68 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagata 118 ||||||||||| ||||||||||||||||| ||||||||||||||| |||| Sbjct: 900 tgcgggctgcgaaagcggtaccaaatcgagacaaactctgaatactggata 950
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 430 bits (217), Expect = e-117 Identities = 337/377 (89%) Strand = Plus / Plus Query: 151 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 210 ||||||||| | |||||||||||| |||||| | ||||||||||||| |||||||||||| Sbjct: 972 agtgagacggtaggggataagctttatcgtcaaaagggaaacagcccagatcaccagcta 1031 Query: 211 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 270 ||||||||||||| ||||| |||| ||||| ||||||| ||||||||||| ||| |||| Sbjct: 1032 aggcccctaaatggccgctaagtggtaaagaaggtgggagtgcaaagacaatcagtaggt 1091 Query: 271 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 330 ||||||||||||||||| |||| |||||||||||||||||||||||||| ||||| |||| Sbjct: 1092 ttgcctagaagcagccatccttaaaagagtgcgtaatagctcactgatcaagcgctcttg 1151 Query: 331 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 390 ||| ||||||||||||| ||||||| ||||||||||||||||||||| ||| |||||| Sbjct: 1152 cgccgaagatgaacgggactaagcggtctgccgaagctgtgggatgtaaaataacatcgg 1211 Query: 391 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 450 |||||||||||||||| ||| | |||||| | | | || | || || |||||||||||| Sbjct: 1212 taggggagcgttccgctctagggagaagcatcagtgtaaacaggtgtggacgaagcggaa 1271 Query: 451 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccca 510 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 1272 gcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaaccta 1331 Query: 511 aggtttcctccgcaagg 527 ||| ||||||||||||| Sbjct: 1332 agggttcctccgcaagg 1348 Score = 131 bits (66), Expect = 3e-27 Identities = 97/106 (91%), Gaps = 1/106 (0%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcgg 67 ||||||||||||||||||||||| || |||| || ||| ||||||||||||||||||||| Sbjct: 845 ccgaaatgcgttgaggcgcagcaattaactgcactatccaggggtaaagcactgtttcgg 904 Query: 68 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 113 |||||||| || || |||||||||||||||||||||||||||||| Sbjct: 905 tgcgggctacgaaagtggtaccaaatcgaggcaaactctgaatact 950
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 416 bits (210), Expect = e-113 Identities = 439/513 (85%), Gaps = 8/513 (1%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||| ||||| ||| ||| || ||| ||||||||||||||||| ||||||| Sbjct: 807 ccgaaatgcgtttaggcggagccgtt-accagacctctaggggtaaagcactatttcggt 865 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgac--ccaa 126 || || ||| |||||||||||||| |||||||||| |||||| |||||||||| |||| Sbjct: 866 gcaggtcgcgagagcggtaccaaattgaggcaaactatgaatattagatatgacttccaa 925 Query: 127 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 186 ||||||||||| | ||||| | |||| ||||| ||||||||||||||||||||||||||| Sbjct: 926 aaataacagggataaaggtggaccagcgagaccatgggggataagcttcatcgtcgagag 985 Query: 187 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 246 || |||| ||| |||||| ||||||||||||||||||||| || ||| ||||||||||| Sbjct: 986 gggaacaacccagatcactagctaaggcccctaaatgaccactaagttataaaggaggta 1045 Query: 247 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 306 |||||||| | ||| |||||| ||||||||||||| ||||||| |||||||||||||||| Sbjct: 1046 ggggtgcataaacaaccaggaagtttgcctagaagaagccaccttttaaagagtgcgtaa 1105 Query: 307 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 366 ||||| |||||||||| || |||| || ||| ||||||||| ||||| ||| |||||| Sbjct: 1106 tagctaactgatcgagtgctcttgtgccgaatatgaacgggaataagcaatccaccgaag 1165 Query: 367 ctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcg 426 | ||||||||| | |||||| |||||||||||| |||||| | ||||||| | || Sbjct: 1166 ccgtgggatgtaa-----catcggcaggggagcgttctgccttataaggaagcacctgca 1220 Query: 427 aaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtg 486 || | ||| || ||||| |||| |||||||||||||||||||||| ||||||||||| Sbjct: 1221 cgagaagtggtggatgaagcagaagtgagaatgtcggcttgagtaacgcaaacattggtg 1280 Query: 487 agaatccaatgccccgaaaacccaaggtttcct 519 |||||||||||||||||||||| |||| ||||| Sbjct: 1281 agaatccaatgccccgaaaacctaaggattcct 1313
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 416 bits (210), Expect = e-113 Identities = 439/513 (85%), Gaps = 8/513 (1%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||| ||||| ||| ||| || ||| ||||||||||||||||| ||||||| Sbjct: 808 ccgaaatgcgtttaggcggagccgtt-accagacctctaggggtaaagcactatttcggt 866 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgac--ccaa 126 || || ||| |||||||||||||| |||||||||| |||||| |||||||||| |||| Sbjct: 867 gcaggtcgcgagagcggtaccaaattgaggcaaactatgaatattagatatgacttccaa 926 Query: 127 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 186 ||||||||||| | ||||| | |||| ||||| ||||||||||||||||||||||||||| Sbjct: 927 aaataacagggataaaggtggaccagcgagaccatgggggataagcttcatcgtcgagag 986 Query: 187 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 246 || |||| ||| |||||| ||||||||||||||||||||| || ||| ||||||||||| Sbjct: 987 gggaacaacccagatcactagctaaggcccctaaatgaccactaagttataaaggaggta 1046 Query: 247 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 306 |||||||| | ||| |||||| ||||||||||||| ||||||| |||||||||||||||| Sbjct: 1047 ggggtgcataaacaaccaggaagtttgcctagaagaagccaccttttaaagagtgcgtaa 1106 Query: 307 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 366 ||||| |||||||||| || |||| || ||| ||||||||| ||||| ||| |||||| Sbjct: 1107 tagctaactgatcgagtgctcttgtgccgaatatgaacgggaataagcaatccaccgaag 1166 Query: 367 ctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcg 426 | ||||||||| | |||||| |||||||||||| |||||| | ||||||| | || Sbjct: 1167 ccgtgggatgtaa-----catcggcaggggagcgttctgccttataaggaagcacctgca 1221 Query: 427 aaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtg 486 || | ||| || ||||| |||| |||||||||||||||||||||| ||||||||||| Sbjct: 1222 cgagaagtggtggatgaagcagaagtgagaatgtcggcttgagtaacgcaaacattggtg 1281 Query: 487 agaatccaatgccccgaaaacccaaggtttcct 519 |||||||||||||||||||||| |||| ||||| Sbjct: 1282 agaatccaatgccccgaaaacctaaggattcct 1314
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 416 bits (210), Expect = e-113 Identities = 439/513 (85%), Gaps = 8/513 (1%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||| ||||| ||| ||| || ||| ||||||||||||||||| ||||||| Sbjct: 808 ccgaaatgcgtttaggcggagccgtt-accagacctctaggggtaaagcactatttcggt 866 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgac--ccaa 126 || || ||| |||||||||||||| |||||||||| |||||| |||||||||| |||| Sbjct: 867 gcaggtcgcgagagcggtaccaaattgaggcaaactatgaatattagatatgacttccaa 926 Query: 127 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 186 ||||||||||| | ||||| | |||| ||||| ||||||||||||||||||||||||||| Sbjct: 927 aaataacagggataaaggtggaccagcgagaccatgggggataagcttcatcgtcgagag 986 Query: 187 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 246 || |||| ||| |||||| ||||||||||||||||||||| || ||| ||||||||||| Sbjct: 987 gggaacaacccagatcactagctaaggcccctaaatgaccactaagttataaaggaggta 1046 Query: 247 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 306 |||||||| | ||| |||||| ||||||||||||| ||||||| |||||||||||||||| Sbjct: 1047 ggggtgcataaacaaccaggaagtttgcctagaagaagccaccttttaaagagtgcgtaa 1106 Query: 307 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 366 ||||| |||||||||| || |||| || ||| ||||||||| ||||| ||| |||||| Sbjct: 1107 tagctaactgatcgagtgctcttgtgccgaatatgaacgggaataagcaatccaccgaag 1166 Query: 367 ctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcg 426 | ||||||||| | |||||| |||||||||||| |||||| | ||||||| | || Sbjct: 1167 ccgtgggatgtaa-----catcggcaggggagcgttctgccttataaggaagcacctgca 1221 Query: 427 aaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtg 486 || | ||| || ||||| |||| |||||||||||||||||||||| ||||||||||| Sbjct: 1222 cgagaagtggtggatgaagcagaagtgagaatgtcggcttgagtaacgcaaacattggtg 1281 Query: 487 agaatccaatgccccgaaaacccaaggtttcct 519 |||||||||||||||||||||| |||| ||||| Sbjct: 1282 agaatccaatgccccgaaaacctaaggattcct 1314
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 416 bits (210), Expect = e-113 Identities = 439/513 (85%), Gaps = 8/513 (1%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||| ||||| ||| ||| || ||| ||||||||||||||||| ||||||| Sbjct: 808 ccgaaatgcgtttaggcggagccgtt-accagacctctaggggtaaagcactatttcggt 866 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgac--ccaa 126 || || ||| |||||||||||||| |||||||||| |||||| |||||||||| |||| Sbjct: 867 gcaggtcgcgagagcggtaccaaattgaggcaaactatgaatattagatatgacttccaa 926 Query: 127 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 186 ||||||||||| | ||||| | |||| ||||| ||||||||||||||||||||||||||| Sbjct: 927 aaataacagggataaaggtggaccagcgagaccatgggggataagcttcatcgtcgagag 986 Query: 187 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 246 || |||| ||| |||||| ||||||||||||||||||||| || ||| ||||||||||| Sbjct: 987 gggaacaacccagatcactagctaaggcccctaaatgaccactaagttataaaggaggta 1046 Query: 247 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 306 |||||||| | ||| |||||| ||||||||||||| ||||||| |||||||||||||||| Sbjct: 1047 ggggtgcataaacaaccaggaagtttgcctagaagaagccaccttttaaagagtgcgtaa 1106 Query: 307 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 366 ||||| |||||||||| || |||| || ||| ||||||||| ||||| ||| |||||| Sbjct: 1107 tagctaactgatcgagtgctcttgtgccgaatatgaacgggaataagcaatccaccgaag 1166 Query: 367 ctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcg 426 | ||||||||| | |||||| |||||||||||| |||||| | ||||||| | || Sbjct: 1167 ccgtgggatgtaa-----catcggcaggggagcgttctgccttataaggaagcacctgca 1221 Query: 427 aaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtg 486 || | ||| || ||||| |||| |||||||||||||||||||||| ||||||||||| Sbjct: 1222 cgagaagtggtggatgaagcagaagtgagaatgtcggcttgagtaacgcaaacattggtg 1281 Query: 487 agaatccaatgccccgaaaacccaaggtttcct 519 |||||||||||||||||||||| |||| ||||| Sbjct: 1282 agaatccaatgccccgaaaacctaaggattcct 1314
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 416 bits (210), Expect = e-113 Identities = 439/513 (85%), Gaps = 8/513 (1%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||| ||||| ||| ||| || ||| ||||||||||||||||| ||||||| Sbjct: 808 ccgaaatgcgtttaggcggagccgtt-accagacctctaggggtaaagcactatttcggt 866 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgac--ccaa 126 || || ||| |||||||||||||| |||||||||| |||||| |||||||||| |||| Sbjct: 867 gcaggtcgcgagagcggtaccaaattgaggcaaactatgaatattagatatgacttccaa 926 Query: 127 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 186 ||||||||||| | ||||| | |||| ||||| ||||||||||||||||||||||||||| Sbjct: 927 aaataacagggataaaggtggaccagcgagaccatgggggataagcttcatcgtcgagag 986 Query: 187 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 246 || |||| ||| |||||| ||||||||||||||||||||| || ||| ||||||||||| Sbjct: 987 gggaacaacccagatcactagctaaggcccctaaatgaccactaagttataaaggaggta 1046 Query: 247 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 306 |||||||| | ||| |||||| ||||||||||||| ||||||| |||||||||||||||| Sbjct: 1047 ggggtgcataaacaaccaggaagtttgcctagaagaagccaccttttaaagagtgcgtaa 1106 Query: 307 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 366 ||||| |||||||||| || |||| || ||| ||||||||| ||||| ||| |||||| Sbjct: 1107 tagctaactgatcgagtgctcttgtgccgaatatgaacgggaataagcaatccaccgaag 1166 Query: 367 ctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcg 426 | ||||||||| | |||||| |||||||||||| |||||| | ||||||| | || Sbjct: 1167 ccgtgggatgtaa-----catcggcaggggagcgttctgccttataaggaagcacctgca 1221 Query: 427 aaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtg 486 || | ||| || ||||| |||| |||||||||||||||||||||| ||||||||||| Sbjct: 1222 cgagaagtggtggatgaagcagaagtgagaatgtcggcttgagtaacgcaaacattggtg 1281 Query: 487 agaatccaatgccccgaaaacccaaggtttcct 519 |||||||||||||||||||||| |||| ||||| Sbjct: 1282 agaatccaatgccccgaaaacctaaggattcct 1314
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 416 bits (210), Expect = e-113 Identities = 439/513 (85%), Gaps = 8/513 (1%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||| ||||| ||| ||| || ||| ||||||||||||||||| ||||||| Sbjct: 807 ccgaaatgcgtttaggcggagccgtt-accagacctctaggggtaaagcactatttcggt 865 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgac--ccaa 126 || || ||| |||||||||||||| |||||||||| |||||| |||||||||| |||| Sbjct: 866 gcaggtcgcgagagcggtaccaaattgaggcaaactatgaatattagatatgacttccaa 925 Query: 127 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 186 ||||||||||| | ||||| | |||| ||||| ||||||||||||||||||||||||||| Sbjct: 926 aaataacagggataaaggtggaccagcgagaccatgggggataagcttcatcgtcgagag 985 Query: 187 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 246 || |||| ||| |||||| ||||||||||||||||||||| || ||| ||||||||||| Sbjct: 986 gggaacaacccagatcactagctaaggcccctaaatgaccactaagttataaaggaggta 1045 Query: 247 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 306 |||||||| | ||| |||||| ||||||||||||| ||||||| |||||||||||||||| Sbjct: 1046 ggggtgcataaacaaccaggaagtttgcctagaagaagccaccttttaaagagtgcgtaa 1105 Query: 307 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 366 ||||| |||||||||| || |||| || ||| ||||||||| ||||| ||| |||||| Sbjct: 1106 tagctaactgatcgagtgctcttgtgccgaatatgaacgggaataagcaatccaccgaag 1165 Query: 367 ctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcg 426 | ||||||||| | |||||| |||||||||||| |||||| | ||||||| | || Sbjct: 1166 ccgtgggatgtaa-----catcggcaggggagcgttctgccttataaggaagcacctgca 1220 Query: 427 aaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtg 486 || | ||| || ||||| |||| |||||||||||||||||||||| ||||||||||| Sbjct: 1221 cgagaagtggtggatgaagcagaagtgagaatgtcggcttgagtaacgcaaacattggtg 1280 Query: 487 agaatccaatgccccgaaaacccaaggtttcct 519 |||||||||||||||||||||| |||| ||||| Sbjct: 1281 agaatccaatgccccgaaaacctaaggattcct 1313
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 416 bits (210), Expect = e-113 Identities = 439/513 (85%), Gaps = 8/513 (1%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||| ||||| ||| ||| || ||| ||||||||||||||||| ||||||| Sbjct: 808 ccgaaatgcgtttaggcggagccgtt-accagacctctaggggtaaagcactatttcggt 866 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgac--ccaa 126 || || ||| |||||||||||||| |||||||||| |||||| |||||||||| |||| Sbjct: 867 gcaggtcgcgagagcggtaccaaattgaggcaaactatgaatattagatatgacttccaa 926 Query: 127 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 186 ||||||||||| | ||||| | |||| ||||| ||||||||||||||||||||||||||| Sbjct: 927 aaataacagggataaaggtggaccagcgagaccatgggggataagcttcatcgtcgagag 986 Query: 187 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 246 || |||| ||| |||||| ||||||||||||||||||||| || ||| ||||||||||| Sbjct: 987 gggaacaacccagatcactagctaaggcccctaaatgaccactaagttataaaggaggta 1046 Query: 247 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 306 |||||||| | ||| |||||| ||||||||||||| ||||||| |||||||||||||||| Sbjct: 1047 ggggtgcataaacaaccaggaagtttgcctagaagaagccaccttttaaagagtgcgtaa 1106 Query: 307 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 366 ||||| |||||||||| || |||| || ||| ||||||||| ||||| ||| |||||| Sbjct: 1107 tagctaactgatcgagtgctcttgtgccgaatatgaacgggaataagcaatccaccgaag 1166 Query: 367 ctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcg 426 | ||||||||| | |||||| |||||||||||| |||||| | ||||||| | || Sbjct: 1167 ccgtgggatgtaa-----catcggcaggggagcgttctgccttataaggaagcacctgca 1221 Query: 427 aaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtg 486 || | ||| || ||||| |||| |||||||||||||||||||||| ||||||||||| Sbjct: 1222 cgagaagtggtggatgaagcagaagtgagaatgtcggcttgagtaacgcaaacattggtg 1281 Query: 487 agaatccaatgccccgaaaacccaaggtttcct 519 |||||||||||||||||||||| |||| ||||| Sbjct: 1282 agaatccaatgccccgaaaacctaaggattcct 1314
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 416 bits (210), Expect = e-113 Identities = 439/513 (85%), Gaps = 8/513 (1%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||| ||||| ||| ||| || ||| ||||||||||||||||| ||||||| Sbjct: 808 ccgaaatgcgtttaggcggagccgtt-accagacctctaggggtaaagcactatttcggt 866 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgac--ccaa 126 || || ||| |||||||||||||| |||||||||| |||||| |||||||||| |||| Sbjct: 867 gcaggtcgcgagagcggtaccaaattgaggcaaactatgaatattagatatgacttccaa 926 Query: 127 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 186 ||||||||||| | ||||| | |||| ||||| ||||||||||||||||||||||||||| Sbjct: 927 aaataacagggataaaggtggaccagcgagaccatgggggataagcttcatcgtcgagag 986 Query: 187 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 246 || |||| ||| |||||| ||||||||||||||||||||| || ||| ||||||||||| Sbjct: 987 gggaacaacccagatcactagctaaggcccctaaatgaccactaagttataaaggaggta 1046 Query: 247 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 306 |||||||| | ||| |||||| ||||||||||||| ||||||| |||||||||||||||| Sbjct: 1047 ggggtgcataaacaaccaggaagtttgcctagaagaagccaccttttaaagagtgcgtaa 1106 Query: 307 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 366 ||||| |||||||||| || |||| || ||| ||||||||| ||||| ||| |||||| Sbjct: 1107 tagctaactgatcgagtgctcttgtgccgaatatgaacgggaataagcaatccaccgaag 1166 Query: 367 ctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcg 426 | ||||||||| | |||||| |||||||||||| |||||| | ||||||| | || Sbjct: 1167 ccgtgggatgtaa-----catcggcaggggagcgttctgccttataaggaagcacctgca 1221 Query: 427 aaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtg 486 || | ||| || ||||| |||| |||||||||||||||||||||| ||||||||||| Sbjct: 1222 cgagaagtggtggatgaagcagaagtgagaatgtcggcttgagtaacgcaaacattggtg 1281 Query: 487 agaatccaatgccccgaaaacccaaggtttcct 519 |||||||||||||||||||||| |||| ||||| Sbjct: 1282 agaatccaatgccccgaaaacctaaggattcct 1314
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 416 bits (210), Expect = e-113 Identities = 439/513 (85%), Gaps = 8/513 (1%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||| ||||| ||| ||| || ||| ||||||||||||||||| ||||||| Sbjct: 808 ccgaaatgcgtttaggcggagccgtt-accagacctctaggggtaaagcactatttcggt 866 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgac--ccaa 126 || || ||| |||||||||||||| |||||||||| |||||| |||||||||| |||| Sbjct: 867 gcaggtcgcgagagcggtaccaaattgaggcaaactatgaatattagatatgacttccaa 926 Query: 127 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 186 ||||||||||| | ||||| | |||| ||||| ||||||||||||||||||||||||||| Sbjct: 927 aaataacagggataaaggtggaccagcgagaccatgggggataagcttcatcgtcgagag 986 Query: 187 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 246 || |||| ||| |||||| ||||||||||||||||||||| || ||| ||||||||||| Sbjct: 987 gggaacaacccagatcactagctaaggcccctaaatgaccactaagttataaaggaggta 1046 Query: 247 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 306 |||||||| | ||| |||||| ||||||||||||| ||||||| |||||||||||||||| Sbjct: 1047 ggggtgcataaacaaccaggaagtttgcctagaagaagccaccttttaaagagtgcgtaa 1106 Query: 307 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 366 ||||| |||||||||| || |||| || ||| ||||||||| ||||| ||| |||||| Sbjct: 1107 tagctaactgatcgagtgctcttgtgccgaatatgaacgggaataagcaatccaccgaag 1166 Query: 367 ctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcg 426 | ||||||||| | |||||| |||||||||||| |||||| | ||||||| | || Sbjct: 1167 ccgtgggatgtaa-----catcggcaggggagcgttctgccttataaggaagcacctgca 1221 Query: 427 aaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtg 486 || | ||| || ||||| |||| |||||||||||||||||||||| ||||||||||| Sbjct: 1222 cgagaagtggtggatgaagcagaagtgagaatgtcggcttgagtaacgcaaacattggtg 1281 Query: 487 agaatccaatgccccgaaaacccaaggtttcct 519 |||||||||||||||||||||| |||| ||||| Sbjct: 1282 agaatccaatgccccgaaaacctaaggattcct 1314
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 416 bits (210), Expect = e-113 Identities = 439/513 (85%), Gaps = 8/513 (1%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||| ||||| ||| ||| || ||| ||||||||||||||||| ||||||| Sbjct: 808 ccgaaatgcgtttaggcggagccgtt-accagacctctaggggtaaagcactatttcggt 866 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgac--ccaa 126 || || ||| |||||||||||||| |||||||||| |||||| |||||||||| |||| Sbjct: 867 gcaggtcgcgagagcggtaccaaattgaggcaaactatgaatattagatatgacttccaa 926 Query: 127 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 186 ||||||||||| | ||||| | |||| ||||| ||||||||||||||||||||||||||| Sbjct: 927 aaataacagggataaaggtggaccagcgagaccatgggggataagcttcatcgtcgagag 986 Query: 187 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 246 || |||| ||| |||||| ||||||||||||||||||||| || ||| ||||||||||| Sbjct: 987 gggaacaacccagatcactagctaaggcccctaaatgaccactaagttataaaggaggta 1046 Query: 247 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 306 |||||||| | ||| |||||| ||||||||||||| ||||||| |||||||||||||||| Sbjct: 1047 ggggtgcataaacaaccaggaagtttgcctagaagaagccaccttttaaagagtgcgtaa 1106 Query: 307 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 366 ||||| |||||||||| || |||| || ||| ||||||||| ||||| ||| |||||| Sbjct: 1107 tagctaactgatcgagtgctcttgtgccgaatatgaacgggaataagcaatccaccgaag 1166 Query: 367 ctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcg 426 | ||||||||| | |||||| |||||||||||| |||||| | ||||||| | || Sbjct: 1167 ccgtgggatgtaa-----catcggcaggggagcgttctgccttataaggaagcacctgca 1221 Query: 427 aaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtg 486 || | ||| || ||||| |||| |||||||||||||||||||||| ||||||||||| Sbjct: 1222 cgagaagtggtggatgaagcagaagtgagaatgtcggcttgagtaacgcaaacattggtg 1281 Query: 487 agaatccaatgccccgaaaacccaaggtttcct 519 |||||||||||||||||||||| |||| ||||| Sbjct: 1282 agaatccaatgccccgaaaacctaaggattcct 1314
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 416 bits (210), Expect = e-113 Identities = 439/513 (85%), Gaps = 8/513 (1%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||| ||||| ||| ||| || ||| ||||||||||||||||| ||||||| Sbjct: 808 ccgaaatgcgtttaggcggagccgtt-accagacctctaggggtaaagcactatttcggt 866 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgac--ccaa 126 || || ||| |||||||||||||| |||||||||| |||||| |||||||||| |||| Sbjct: 867 gcaggtcgcgagagcggtaccaaattgaggcaaactatgaatattagatatgacttccaa 926 Query: 127 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 186 ||||||||||| | ||||| | |||| ||||| ||||||||||||||||||||||||||| Sbjct: 927 aaataacagggataaaggtggaccagcgagaccatgggggataagcttcatcgtcgagag 986 Query: 187 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 246 || |||| ||| |||||| ||||||||||||||||||||| || ||| ||||||||||| Sbjct: 987 gggaacaacccagatcactagctaaggcccctaaatgaccactaagttataaaggaggta 1046 Query: 247 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 306 |||||||| | ||| |||||| ||||||||||||| ||||||| |||||||||||||||| Sbjct: 1047 ggggtgcataaacaaccaggaagtttgcctagaaggagccaccttttaaagagtgcgtaa 1106 Query: 307 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 366 ||||| |||||||||| || |||| || ||| ||||||||| ||||| ||| |||||| Sbjct: 1107 tagctaactgatcgagtgctcttgtgccgaatatgaacgggaataagcaatccaccgaag 1166 Query: 367 ctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcg 426 | ||||||||| | |||||| |||||||||||| |||||| | ||||||| | || Sbjct: 1167 ccgtgggatgtaa-----catcggcaggggagcgttctgccttataaggaagcacctgca 1221 Query: 427 aaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtg 486 || | ||| || ||||| |||| |||||||||||||||||||||| ||||||||||| Sbjct: 1222 cgagaagtggtggatgaagcagaagtgagaatgtcggcttgagtaacgcaaacattggtg 1281 Query: 487 agaatccaatgccccgaaaacccaaggtttcct 519 |||||||||||||||||||||| |||| ||||| Sbjct: 1282 agaatccaatgccccgaaaacctaaggattcct 1314
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 414 bits (209), Expect = e-112 Identities = 334/375 (89%), Gaps = 3/375 (0%) Strand = Plus / Plus Query: 148 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 207 |||||||||||| ||||||||||||| ||||||||| ||||||||||||| ||||||||| Sbjct: 915 gccagtgagacggtgggggataagctccatcgtcgaaagggaaacagcccagatcaccag 974 Query: 208 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 267 ||||||||||||||||||||| |||||||||||| ||| | |||||||||||||||||| Sbjct: 975 ttaaggcccctaaatgaccgctaagtgataaaggatgtgagagtgcaaagacagccagga 1034 Query: 268 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 327 |||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| | Sbjct: 1035 ggtttgcctagaagcagctacccttgaaagagtgcgtaatagctcactgatcgagcgctc 1094 Query: 328 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat---g 384 |||||| ||||||||| ||| ||||||| ||||||||||||||| ||||| |||| Sbjct: 1095 ttgcgccgaagatgaatgggactaagcggtctgccgaagctgtgagatgtttaaatataa 1154 Query: 385 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 444 |||||||||||||||||||||| |||| |||||| ||| ||||| || ||| || Sbjct: 1155 catcggtaggggagcgttccgcattaggttgaagcactagcgtaagcgaatgtggacaaa 1214 Query: 445 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 504 ||||||| |||||||||||||||||||||| ||||| ||||||||||||| ||||||||| Sbjct: 1215 gcggaagtgagaatgtcggcttgagtaacgcaaacactggtgagaatccagtgccccgaa 1274 Query: 505 aacccaaggtttcct 519 ||||||||| ||||| Sbjct: 1275 aacccaaggattcct 1289 Score = 131 bits (66), Expect = 3e-27 Identities = 103/114 (90%), Gaps = 1/114 (0%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcgg 67 |||||||||||||||||||||| ||||||| ||| || |||||||||||||||||||||| Sbjct: 791 ccgaaatgcgttgaggcgcagcggttgactagactatttaggggtaaagcactgtttcgg 850 Query: 68 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 121 ||||||||| | | ||||||||||| || ||||||||||||||||| |||||| Sbjct: 851 tgcgggctgtgaaaacggtaccaaattgatgcaaactctgaatactaaatatga 904
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 412 bits (208), Expect = e-112 Identities = 208/208 (100%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 835 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 894 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 895 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 954 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 955 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagaggg 1014 Query: 189 aaacagcccggatcaccagctaaggccc 216 |||||||||||||||||||||||||||| Sbjct: 1015 aaacagcccggatcaccagctaaggccc 1042
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 410 bits (207), Expect = e-111 Identities = 411/478 (85%), Gaps = 7/478 (1%) Strand = Plus / Plus Query: 44 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 103 ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||||||||| Sbjct: 841 tctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaac 900 Query: 104 tctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgat 161 | |||||| |||||||||| ||||||||||||||| | ||||| | |||| ||||| || Sbjct: 901 tatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcgagaccat 960 Query: 162 gggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaa 221 ||||||||||||||||||||||||||| |||| ||| |||||| |||||||||||||||| Sbjct: 961 gggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaa 1020 Query: 222 tgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaag 281 ||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||||||||||| Sbjct: 1021 tgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaag 1080 Query: 282 cagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatg 341 ||||||| ||||||||||||||||||||| |||||||||| || |||| || ||| ||| Sbjct: 1081 aagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatg 1140 Query: 342 aacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgt 401 |||||| ||||| ||| ||||||| ||||||||| | |||||| |||||||||| Sbjct: 1141 aacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgt 1195 Query: 402 tccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtc 461 || |||||| | ||||||| | || || | ||| || ||||| |||| ||||||||| Sbjct: 1196 tctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaagtgagaatgtc 1255 Query: 462 ggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 519 ||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| Sbjct: 1256 ggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattcct 1313
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 408 bits (206), Expect = e-111 Identities = 438/513 (85%), Gaps = 8/513 (1%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||| ||||| ||| ||| || ||| ||||||||||||||||| ||||||| Sbjct: 808 ccgaaatgcgtttaggcggagccgtt-accagacctctaggggtaaagcactatttcggt 866 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgac--ccaa 126 || || ||| |||||||||||||| |||||||||| |||||| |||||||||| |||| Sbjct: 867 gcaggtcgcgagagcggtaccaaattgaggcaaactatgaatattagatatgacttccaa 926 Query: 127 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 186 ||||||||||| | ||||| | |||| ||||| ||||||||||||||||||||||||||| Sbjct: 927 aaataacagggataaaggtggaccagcgagaccatgggggataagcttcatcgtcgagag 986 Query: 187 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 246 || |||| ||| |||||| ||||||||||||||||||||| || ||| ||||||||||| Sbjct: 987 gggaacaacccagatcactagctaaggcccctaaatgaccactaagttataaaggaggta 1046 Query: 247 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 306 |||||||| | ||| |||||| ||||||||||||| |||||| |||||||||||||||| Sbjct: 1047 ggggtgcataaacaaccaggaagtttgcctagaagaggccaccttttaaagagtgcgtaa 1106 Query: 307 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 366 ||||| |||||||||| || |||| || ||| ||||||||| ||||| ||| |||||| Sbjct: 1107 tagctaactgatcgagtgctcttgtgccgaatatgaacgggaataagcaatccaccgaag 1166 Query: 367 ctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcg 426 | ||||||||| | |||||| |||||||||||| |||||| | ||||||| | || Sbjct: 1167 ccgtgggatgtaa-----catcggcaggggagcgttctgccttataaggaagcacctgca 1221 Query: 427 aaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtg 486 || | ||| || ||||| |||| |||||||||||||||||||||| ||||||||||| Sbjct: 1222 cgagaagtggtggatgaagcagaagtgagaatgtcggcttgagtaacgcaaacattggtg 1281 Query: 487 agaatccaatgccccgaaaacccaaggtttcct 519 |||||||||||||||||||||| |||| ||||| Sbjct: 1282 agaatccaatgccccgaaaacctaaggattcct 1314
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 408 bits (206), Expect = e-111 Identities = 438/513 (85%), Gaps = 8/513 (1%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||| ||||| ||| ||| || ||| ||||||||||||||||| ||||||| Sbjct: 808 ccgaaatgcgtttaggcggagccgtt-accagacctctaggggtaaagcactatttcggt 866 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgac--ccaa 126 || || ||| |||||||||||||| |||||||||| |||||| |||||||||| |||| Sbjct: 867 gcaggtcgcgagagcggtaccaaattgaggcaaactatgaatattagatatgacttccaa 926 Query: 127 aaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagag 186 ||||||||||| | ||||| | |||| ||||| ||||||||||||||||||||||||||| Sbjct: 927 aaataacagggataaaggtggaccagcgagaccatgggggataagcttcatcgtcgagag 986 Query: 187 ggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggaggtg 246 || |||| ||| |||||| ||||||||||||||||||||| || ||| ||||||||||| Sbjct: 987 gggaacaacccagatcactagctaaggcccctaaatgaccactaagttataaaggaggta 1046 Query: 247 ggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaa 306 |||||||| | ||| |||||| | ||||||||||| ||||||| |||||||||||||||| Sbjct: 1047 ggggtgcataaacaaccaggaagcttgcctagaagaagccaccttttaaagagtgcgtaa 1106 Query: 307 tagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccgaag 366 ||||| |||||||||| || |||| || ||| ||||||||| ||||| ||| |||||| Sbjct: 1107 tagctaactgatcgagtgctcttgtgccgaatatgaacgggaataagcaatccaccgaag 1166 Query: 367 ctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccgcg 426 | ||||||||| | |||||| |||||||||||| |||||| | ||||||| | || Sbjct: 1167 ccgtgggatgtaa-----catcggcaggggagcgttctgccttataaggaagcacctgca 1221 Query: 427 aaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtg 486 || | ||| || ||||| |||| |||||||||||||||||||||| ||||||||||| Sbjct: 1222 cgagaagtggtggatgaagcagaagtgagaatgtcggcttgagtaacgcaaacattggtg 1281 Query: 487 agaatccaatgccccgaaaacccaaggtttcct 519 |||||||||||||||||||||| |||| ||||| Sbjct: 1282 agaatccaatgccccgaaaacctaaggattcct 1314
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 402 bits (203), Expect = e-109 Identities = 410/478 (85%), Gaps = 7/478 (1%) Strand = Plus / Plus Query: 44 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 103 ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||||||||| Sbjct: 842 tctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaac 901 Query: 104 tctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgat 161 | |||||| |||||||||| ||||||||||||||| | ||||| | |||| ||||| || Sbjct: 902 tatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcgagaccat 961 Query: 162 gggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaa 221 ||||||||||||||||||||||||||| |||| ||| |||||| |||||||||||||||| Sbjct: 962 gggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaa 1021 Query: 222 tgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaag 281 ||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||||||||||| Sbjct: 1022 tgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaag 1081 Query: 282 cagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatg 341 ||||||| ||||||||||||||||||||| |||||||||| || |||| || ||| ||| Sbjct: 1082 aagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatg 1141 Query: 342 aacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgt 401 |||||| ||||| ||| ||||||| ||||||||| | |||||| |||||||||| Sbjct: 1142 aacgggaataagcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgt 1196 Query: 402 tccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtc 461 || |||||| | ||||||| | || || | ||| || ||||| || | ||||||||| Sbjct: 1197 tctgccttataaggaagcacctgcacgagaagtggtggatgaagcagaggtgagaatgtc 1256 Query: 462 ggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 519 ||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| Sbjct: 1257 ggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattcct 1314
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 402 bits (203), Expect = e-109 Identities = 410/478 (85%), Gaps = 7/478 (1%) Strand = Plus / Plus Query: 44 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 103 ||||||||||||||||| ||||||||| || ||| |||||||||||||| ||||||||| Sbjct: 842 tctaggggtaaagcactatttcggtgcaggtcgcgagagcggtaccaaattgaggcaaac 901 Query: 104 tctgaatactagatatgac--ccaaaaataacaggggtcaaggtcggccagtgagacgat 161 | |||||| |||||||||| ||||||||||||||| | ||||| | |||| ||||| || Sbjct: 902 tatgaatattagatatgacttccaaaaataacagggataaaggtggaccagcgagaccat 961 Query: 162 gggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaa 221 ||||||||||||||||||||||||||| |||| ||| |||||| |||||||||||||||| Sbjct: 962 gggggataagcttcatcgtcgagaggggaacaacccagatcactagctaaggcccctaaa 1021 Query: 222 tgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaag 281 ||||| || ||| ||||||||||| |||||||| | ||| |||||| ||||||||||||| Sbjct: 1022 tgaccactaagttataaaggaggtaggggtgcataaacaaccaggaagtttgcctagaag 1081 Query: 282 cagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatg 341 ||||||| ||||||||||||||||||||| |||||||||| || |||| || ||| ||| Sbjct: 1082 aagccaccttttaaagagtgcgtaatagctaactgatcgagtgctcttgtgccgaatatg 1141 Query: 342 aacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgt 401 |||||| || || ||| ||||||| ||||||||| | |||||| |||||||||| Sbjct: 1142 aacgggaataggcaatccaccgaagccgtgggatgtaa-----catcggcaggggagcgt 1196 Query: 402 tccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtc 461 || |||||| | ||||||| | || || | ||| || ||||| |||| ||||||||| Sbjct: 1197 tctgccttataaggaagcacctgcccgagaagtggtggatgaagcagaagtgagaatgtc 1256 Query: 462 ggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcct 519 ||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||| Sbjct: 1257 ggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggattcct 1314
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 385 bits (194), Expect = e-103 Identities = 336/383 (87%), Gaps = 4/383 (1%) Strand = Plus / Plus Query: 149 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 208 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 952 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 1011 Query: 209 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 268 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| ||||||| Sbjct: 1012 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccaggag 1071 Query: 269 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 328 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 1072 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctct 1131 Query: 329 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg---- 384 ||||| ||| ||| ||||| ||||||| |||||||||||||| |||||| ||| Sbjct: 1132 tgcgccgaaaatggacgggactaagcggcctgccgaagctgtgagatgtctctatggaga 1191 Query: 385 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 444 ||||||||||||||||||||| ||| | |||||| | ||| ||| | || |||||| Sbjct: 1192 tatcggtaggggagcgttccgctatagggtgaagcatcagcgtaagtagatgtggacgaa 1251 Query: 445 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 504 ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1252 gcggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaa 1311 Query: 505 aacccaaggtttcctccgcaagg 527 |||| |||| ||||||||||||| Sbjct: 1312 aacctaagggttcctccgcaagg 1334 Score = 133 bits (67), Expect = 6e-28 Identities = 100/110 (90%), Gaps = 2/110 (1%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgact--ggacatctaggggtaaagcactgtttcg 66 |||||||||||||||||||||| |||| | || ||||||||||||||||||||||| Sbjct: 827 ccgaaatgcgttgaggcgcagcggttggatagggctttctaggggtaaagcactgtttcg 886 Query: 67 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 116 |||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 887 gtgcgggctgcgagagcggtaccaaatcgatgcaaactctgaatactaga 936
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 385 bits (194), Expect = e-103 Identities = 336/383 (87%), Gaps = 4/383 (1%) Strand = Plus / Minus Query: 149 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 208 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 114710 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 114651 Query: 209 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 268 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| ||||||| Sbjct: 114650 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccaggag 114591 Query: 269 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 328 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 114590 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctct 114531 Query: 329 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg---- 384 ||||| ||| ||| ||||| ||||||| |||||||||||||| |||||| ||| Sbjct: 114530 tgcgccgaaaatggacgggactaagcggcctgccgaagctgtgagatgtctctatggaga 114471 Query: 385 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 444 ||||||||||||||||||||| ||| | |||||| | ||| ||| | || |||||| Sbjct: 114470 tatcggtaggggagcgttccgctatagggtgaagcatcagcgtaagtagatgtggacgaa 114411 Query: 445 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 504 ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 114410 gcggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaa 114351 Query: 505 aacccaaggtttcctccgcaagg 527 |||| |||| ||||||||||||| Sbjct: 114350 aacctaagggttcctccgcaagg 114328 Score = 385 bits (194), Expect = e-103 Identities = 336/383 (87%), Gaps = 4/383 (1%) Strand = Plus / Plus Query: 149 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 208 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 87278 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 87337 Query: 209 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 268 ||||||||||||||| ||||| |||| |||||| ||| | ||||| ||||| ||||||| Sbjct: 87338 taaggcccctaaatggccgctaagtggcaaaggatgtgagagtgcagagacaaccaggag 87397 Query: 269 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 328 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 87398 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctct 87457 Query: 329 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg---- 384 ||||| ||| ||| ||||| ||||||| |||||||||||||| |||||| ||| Sbjct: 87458 tgcgccgaaaatggacgggactaagcggcctgccgaagctgtgagatgtctctatggaga 87517 Query: 385 catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 444 ||||||||||||||||||||| ||| | |||||| | ||| ||| | || |||||| Sbjct: 87518 tatcggtaggggagcgttccgctatagggtgaagcatcagcgtaagtagatgtggacgaa 87577 Query: 445 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 504 ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 87578 gcggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaa 87637 Query: 505 aacccaaggtttcctccgcaagg 527 |||| |||| ||||||||||||| Sbjct: 87638 aacctaagggttcctccgcaagg 87660 Score = 133 bits (67), Expect = 6e-28 Identities = 100/110 (90%), Gaps = 2/110 (1%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgact--ggacatctaggggtaaagcactgtttcg 66 |||||||||||||||||||||| |||| | || ||||||||||||||||||||||| Sbjct: 114835 ccgaaatgcgttgaggcgcagcggttggatagggctttctaggggtaaagcactgtttcg 114776 Query: 67 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 116 |||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 114775 gtgcgggctgcgagagcggtaccaaatcgatgcaaactctgaatactaga 114726 Score = 133 bits (67), Expect = 6e-28 Identities = 100/110 (90%), Gaps = 2/110 (1%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgact--ggacatctaggggtaaagcactgtttcg 66 |||||||||||||||||||||| |||| | || ||||||||||||||||||||||| Sbjct: 87153 ccgaaatgcgttgaggcgcagcggttggatagggctttctaggggtaaagcactgtttcg 87212 Query: 67 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 116 |||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 87213 gtgcgggctgcgagagcggtaccaaatcgatgcaaactctgaatactaga 87262
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 373 bits (188), Expect = e-100 Identities = 332/380 (87%) Strand = Plus / Plus Query: 148 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 207 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 3985 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 4044 Query: 208 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 267 |||||||||||||| | |||| |||| |||||||||| | ||||| |||||||||||| Sbjct: 4045 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagccagga 4104 Query: 268 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 327 ||||||| |||||||||| | |||| |||||||||||||||||||||||||| ||||| | Sbjct: 4105 ggtttgcttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgctc 4164 Query: 328 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 387 |||||| ||||||||||||| ||||||||| ||||||| ||||||||||| || | ||| Sbjct: 4165 ttgcgccgaagatgaacgggactaagcgatttgccgaaactgtgggatgtttaagtacat 4224 Query: 388 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 447 |||||||||||||||| || ||||| |||||| | | |||| | | || |||||||| Sbjct: 4225 cggtaggggagcgttctgctatagagtgaagcatcagtgaaaacagatgtggacgaagca 4284 Query: 448 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 507 |||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 4285 gaagtgagaatgtcggcttgagtaacgcaaacattggtgggaatccaatgccccgaaaac 4344 Query: 508 ccaaggtttcctccgcaagg 527 | |||| ||||||||||||| Sbjct: 4345 ctaagggttcctccgcaagg 4364 Score = 137 bits (69), Expect = 4e-29 Identities = 103/113 (91%), Gaps = 1/113 (0%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcgg 67 |||||||||||||||||||||| ||| | ||| | || |||||||||||||||||||||| Sbjct: 3863 ccgaaatgcgttgaggcgcagcggttaaatgggctatttaggggtaaagcactgtttcgg 3922 Query: 68 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 120 ||||||||||| |||||||||||||||| ||||||||||||||||| ||||| Sbjct: 3923 tgcgggctgcgaaagcggtaccaaatcgatgcaaactctgaatactaaatatg 3975
>emb|X06235.1|MIOBRRNP Oenothera berteriana mitDNA with part of plastid rRNA operon Length = 2900 Score = 369 bits (186), Expect = 6e-99 Identities = 216/226 (95%) Strand = Plus / Plus Query: 302 cgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgc 361 |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| Sbjct: 755 cgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcgatctgc 814 Query: 362 cgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaa 421 |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 815 cgaagctgcgggatgtaaaaatgcatcggtaggggagcgttccgccttagagggaagcac 874 Query: 422 ccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacat 481 |||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||||| Sbjct: 875 ccgcgagagcgggggtggacgaagcggaagcgagaatgtcggcttgagtaacgcaaacat 934 Query: 482 tggtgagaatccaatgccccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||||||||||||||| |||| ||||||||||||| Sbjct: 935 tggtgagaatccaatgccccgaaaacctaagggttcctccgcaagg 980
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 365 bits (184), Expect = 1e-97 Identities = 332/380 (87%), Gaps = 1/380 (0%) Strand = Plus / Plus Query: 148 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 207 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010 Query: 208 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 267 |||||||||||||| | |||| |||| |||||||||| | ||||| |||||||||||| Sbjct: 1011 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagccagga 1070 Query: 268 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 327 ||||||| |||||||||| | |||| |||||||||||||||||||||||||| ||||| | Sbjct: 1071 ggtttgcttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgctc 1130 Query: 328 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 387 |||||| ||||||||| ||| ||||||||| ||||||| ||||||||||| ||| ||| Sbjct: 1131 ttgcgccgaagatgaatgggactaagcgatttgccgaaactgtgggatgt-ttaatacat 1189 Query: 388 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 447 |||||||||||||||| || ||||| |||||| | | |||| | | || |||||||| Sbjct: 1190 cggtaggggagcgttctgctatagagtgaagcaccagtgaaaacagatgtggacgaagca 1249 Query: 448 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 507 |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 1250 gaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaac 1309 Query: 508 ccaaggtttcctccgcaagg 527 | |||| ||||||||||||| Sbjct: 1310 ctaagggttcctccgcaagg 1329 Score = 137 bits (69), Expect = 4e-29 Identities = 103/113 (91%), Gaps = 1/113 (0%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcgg 67 |||||||||||||||||||||| ||| | ||| | || |||||||||||||||||||||| Sbjct: 829 ccgaaatgcgttgaggcgcagcggttaaatgggctatttaggggtaaagcactgtttcgg 888 Query: 68 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 120 ||||||||||| |||||||||||||||| ||||||||||||||||| ||||| Sbjct: 889 tgcgggctgcgaaagcggtaccaaatcgatgcaaactctgaatactaaatatg 941
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 359 bits (181), Expect = 6e-96 Identities = 196/201 (97%) Strand = Plus / Plus Query: 113 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 172 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 19152830 tagatatgacccaaaaataacaggggccaaggtcggccagtgagacgatgggggataagc 19152889 Query: 173 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 232 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 19152890 ttcatcgtcgagagggaaacaacccggatcaccagctaaggcccctaaatgaccgctcag 19152949 Query: 233 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 292 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 19152950 tgataaaggaggtgggggtgcaaagatagccaggaggtttgcctagaagcagccaccctt 19153009 Query: 293 taaagagtgcgtaatagctca 313 |||||||||||| ||| |||| Sbjct: 19153010 taaagagtgcgttatatctca 19153030
>dbj|AP005127.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0062D12 Length = 155408 Score = 359 bits (181), Expect = 6e-96 Identities = 196/201 (97%) Strand = Plus / Plus Query: 113 tagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggataagc 172 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 76225 tagatatgacccaaaaataacaggggccaaggtcggccagtgagacgatgggggataagc 76284 Query: 173 ttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcag 232 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 76285 ttcatcgtcgagagggaaacaacccggatcaccagctaaggcccctaaatgaccgctcag 76344 Query: 233 tgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctt 292 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 76345 tgataaaggaggtgggggtgcaaagatagccaggaggtttgcctagaagcagccaccctt 76404 Query: 293 taaagagtgcgtaatagctca 313 |||||||||||| ||| |||| Sbjct: 76405 taaagagtgcgttatatctca 76425
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 357 bits (180), Expect = 2e-95 Identities = 330/380 (86%) Strand = Plus / Plus Query: 148 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 207 |||||| ||||| ||||||||||||||||||||| | |||| |||||||| || |||||| Sbjct: 951 gccagtaagacggtgggggataagcttcatcgtcaaaaggggaacagcccagaccaccag 1010 Query: 208 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 267 |||||||||||||| | |||| |||| |||||||||| | ||||| |||||||||||| Sbjct: 1011 ttaaggcccctaaataatcgctaagtggcaaaggaggtgagagtgcagagacagccagga 1070 Query: 268 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 327 ||||||| |||||||||| | |||| |||||||||||||||||||||||||| ||||| | Sbjct: 1071 ggtttgcttagaagcagcaatccttgaaagagtgcgtaatagctcactgatcaagcgctc 1130 Query: 328 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 387 |||||| ||||||||| ||| ||||||||| ||||||| ||||||||||| || | ||| Sbjct: 1131 ttgcgccgaagatgaatgggactaagcgatttgccgaaactgtgggatgtttaagtacat 1190 Query: 388 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 447 |||||||||||||||| || |||| |||||| | | |||| | | || |||||||| Sbjct: 1191 cggtaggggagcgttctgctatagattgaagcatcagtgaaaacagatgtggacgaagca 1250 Query: 448 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 507 |||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 1251 gaagtgagaatgtcggcttgagtaacgcaaacattggtgggaatccaatgccccgaaaac 1310 Query: 508 ccaaggtttcctccgcaagg 527 | |||| ||||||||||||| Sbjct: 1311 ctaagggttcctccgcaagg 1330 Score = 137 bits (69), Expect = 4e-29 Identities = 103/113 (91%), Gaps = 1/113 (0%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggac-atctaggggtaaagcactgtttcgg 67 |||||||||||||||||||||| ||| | ||| | || |||||||||||||||||||||| Sbjct: 829 ccgaaatgcgttgaggcgcagcggttaaatgggctatttaggggtaaagcactgtttcgg 888 Query: 68 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatg 120 ||||||||||| |||||||||||||||| ||||||||||||||||| ||||| Sbjct: 889 tgcgggctgcgaaagcggtaccaaatcgatgcaaactctgaatactaaatatg 941
>emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene and ITS1, strain SAG 43.94 Length = 4290 Score = 357 bits (180), Expect = 2e-95 Identities = 324/372 (87%), Gaps = 5/372 (1%) Strand = Plus / Plus Query: 149 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 208 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 2505 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 2564 Query: 209 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 268 |||||||||||||| | ||| |||||||||||||||||| |||| ||||| ||||||| Sbjct: 2565 taaggcccctaaataattgctaagtgataaaggaggtgggaatgcatagacaaccaggag 2624 Query: 269 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 328 |||||| |||||||||| |||||||||||||||||||||||||||||| || || | | Sbjct: 2625 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtcaagtgatcc 2684 Query: 329 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 388 ||||| ||| ||||||||| |||||| || ||||||||||||||||| ||| ||| Sbjct: 2685 tgcgccgaaaatgaacgggactaagcaatttgccgaagctgtgggat-----aatttatc 2739 Query: 389 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 448 ||||||||||||||| || ||||| |||||| ||| ||||||| || |||||||| | Sbjct: 2740 ggtaggggagcgttctgcattagattgaagcattagcgtaagcgggtgtggacgaagcag 2799 Query: 449 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 508 ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 2800 aagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaaacc 2859 Query: 509 caaggtttcctc 520 ||||||||||| Sbjct: 2860 taaggtttcctc 2871 Score = 107 bits (54), Expect = 4e-20 Identities = 63/66 (95%) Strand = Plus / Plus Query: 48 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 107 ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| Sbjct: 2425 ggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgatgcaaactctg 2484 Query: 108 aatact 113 |||||| Sbjct: 2485 aatact 2490
>dbj|AP002845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0482C06 Length = 182779 Score = 355 bits (179), Expect = 9e-95 Identities = 206/215 (95%), Gaps = 5/215 (2%) Strand = Plus / Plus Query: 169 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 228 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 167952 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 168011 Query: 229 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 288 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 168012 tcagtgataaaggaggtgggggtgcaaagac-----ggaggtttgcctaaaagcagccac 168066 Query: 289 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 168067 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 168126 Query: 349 ctaagcgatctgccgaagctgtgggatgtcaaaat 383 |||||||||||||| |||||||||||||||||||| Sbjct: 168127 ctaagcgatctgccaaagctgtgggatgtcaaaat 168161
>dbj|AP002882.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0439B06 Length = 135991 Score = 355 bits (179), Expect = 9e-95 Identities = 206/215 (95%), Gaps = 5/215 (2%) Strand = Plus / Plus Query: 169 aagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgc 228 |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 2356 aagcatcatcgtcgagagggaaacagcctggatcaccagctaaggcccctaaatgaccgc 2415 Query: 229 tcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccac 288 ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 2416 tcagtgataaaggaggtgggggtgcaaagac-----ggaggtttgcctaaaagcagccac 2470 Query: 289 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2471 cctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacgggg 2530 Query: 349 ctaagcgatctgccgaagctgtgggatgtcaaaat 383 |||||||||||||| |||||||||||||||||||| Sbjct: 2531 ctaagcgatctgccaaagctgtgggatgtcaaaat 2565
>gb|AC157348.25| Medicago truncatula clone mth2-133e20, complete sequence Length = 115475 Score = 333 bits (168), Expect = 3e-88 Identities = 192/200 (96%) Strand = Plus / Minus Query: 176 atcgtcgagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtga 235 |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 115474 atcgtcgagagggaaacagcccagatcaccagctaaggcccctaaatgatcgctcagtga 115415 Query: 236 taaaggaggtgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaa 295 |||||||||| || ||||| ||||||||||||||||||||||||||||||||||||| || Sbjct: 115414 taaaggaggtaggagtgcagagacagccaggaggtttgcctagaagcagccacccttgaa 115355 Query: 296 agagtgcgtaatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcg 355 |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 115354 agagtgcgtaatagctcactgatcgagcgctcttgcgccgaagatgaacggggctaagcg 115295 Query: 356 atctgccgaagctgtgggat 375 |||||||||||||||||||| Sbjct: 115294 atctgccgaagctgtgggat 115275
>emb|Y08501.2|MIATGENA Arabidopsis thaliana mitochondrial genome Length = 366924 Score = 315 bits (159), Expect = 8e-83 Identities = 174/179 (97%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 365010 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 365069 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 365070 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctcaaa 365129 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgagagg 187 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 365130 ataacaggggtcaaggtcggccagtgagacggtgggggataagcttcatcgtcgagagg 365188 Score = 198 bits (100), Expect = 1e-47 Identities = 128/136 (94%), Gaps = 1/136 (0%) Strand = Plus / Minus Query: 182 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 241 |||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||| Sbjct: 129347 gagagggaaacagcccggatcaccagctaaggcccccaaatggccgctcagttataaagg 129288 Query: 242 aggtgggggtgcaaagacagcc-aggaggtttgcctagaagcagccaccctttaaagagt 300 |||| |||||||| |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 129287 aggtaggggtgcagagacagccaaggaggtttgcctagaagcagccacccttgaaagagc 129228 Query: 301 gcgtaatagctcactg 316 |||||||||||||||| Sbjct: 129227 gcgtaatagctcactg 129212 Score = 48.1 bits (24), Expect = 0.029 Identities = 51/60 (85%) Strand = Plus / Minus Query: 257 gacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 316 |||| ||||||||| || | |||||||||| ||||| |||| |||||||||||||||| Sbjct: 10906 gacaaccaggaggtgggcttggaagcagccatcctttgaagaaagcgtaatagctcactg 10847 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 179 gtcgagagggaaacagcccggatc 202 ||||||||||||||||||| |||| Sbjct: 10984 gtcgagagggaaacagcccagatc 10961
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 313 bits (158), Expect = 3e-82 Identities = 206/222 (92%) Strand = Plus / Plus Query: 150 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 209 ||||||||| ||||||||||||| ||| ||| ||||||||||||||| ||||||||||| Sbjct: 1358 cagtgagacagtgggggataagctccattgtcaagagggaaacagcccagatcaccagct 1417 Query: 210 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 269 ||||||||||||||||||||||||| |||||||||| | |||||||||||||||||||| Sbjct: 1418 aaggcccctaaatgaccgctcagtggcaaaggaggtgagagtgcaaagacagccaggagg 1477 Query: 270 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 329 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct: 1478 tttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcgagcgctctt 1537 Query: 330 gcgctgaagatgaacggggctaagcgatctgccgaagctgtg 371 |||| ||| ||||||||| ||||||| ||||||||||||||| Sbjct: 1538 gcgccgaaaatgaacgggactaagcggtctgccgaagctgtg 1579 Score = 147 bits (74), Expect = 4e-32 Identities = 125/142 (88%) Strand = Plus / Plus Query: 386 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 445 ||||||||||||||||||||| ||||| |||||| ||| |||| || || ||||| | Sbjct: 1601 atcggtaggggagcgttccgcgttagatcgaagcattagcgtaagcaggtgtggacgagg 1660 Query: 446 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 505 |||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |||| Sbjct: 1661 cggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccctgaaa 1720 Query: 506 acccaaggtttcctccgcaagg 527 ||| |||| ||||| ||||||| Sbjct: 1721 acctaaggattcctacgcaagg 1742 Score = 139 bits (70), Expect = 1e-29 Identities = 104/114 (91%), Gaps = 1/114 (0%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggaca-tctaggggtaaagcactgtttcgg 67 |||||||||||||||||||||| |||||| || | |||||||||||||||||||||| Sbjct: 1232 ccgaaatgcgttgaggcgcagcgattgactaaactgtttaggggtaaagcactgtttcgg 1291 Query: 68 tgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatga 121 ||||||||||| |||||||||||||||||||||||||||||||||||| |||| Sbjct: 1292 tgcgggctgcgaaagcggtaccaaatcgaggcaaactctgaatactagacatga 1345
>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome Length = 191952 Score = 309 bits (156), Expect = 5e-81 Identities = 324/379 (85%), Gaps = 2/379 (0%) Strand = Plus / Plus Query: 149 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 208 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 189872 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 189931 Query: 209 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 268 |||||||||||||| | ||| |||| |||||||||||| |||| ||||| ||||||| Sbjct: 189932 taaggcccctaaataattgctaagtggcaaaggaggtgggaatgcatagacaaccaggag 189991 Query: 269 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 328 |||||| |||||||||| |||||||||||||||||||||||||||||| || || | | Sbjct: 189992 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtcaagtgatcc 190051 Query: 329 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 388 ||||| ||| ||||||||| ||||| || ||||||||||||||||||| || |||| Sbjct: 190052 tgcgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt--ttatacatc 190109 Query: 389 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 448 ||||||||||||||| | |||| |||||| ||||||||||| || ||| || | | Sbjct: 190110 ggtaggggagcgttctgtattagtttgaagcattagcgaaagcgggtgtggacaaaacag 190169 Query: 449 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 508 ||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||||| Sbjct: 190170 aagtgagaatgtcggcttaagtagcgaaaacattggtgagaatccaatgccccgaaaacc 190229 Query: 509 caaggtttcctccgcaagg 527 |||| |||||||| |||| Sbjct: 190230 taaggattcctccggaagg 190248 Score = 309 bits (156), Expect = 5e-81 Identities = 324/379 (85%), Gaps = 2/379 (0%) Strand = Plus / Plus Query: 149 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 208 |||||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||| Sbjct: 151299 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagc 151358 Query: 209 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 268 |||||||||||||| | ||| |||| |||||||||||| |||| ||||| ||||||| Sbjct: 151359 taaggcccctaaataattgctaagtggcaaaggaggtgggaatgcatagacaaccaggag 151418 Query: 269 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 328 |||||| |||||||||| |||||||||||||||||||||||||||||| || || | | Sbjct: 151419 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtcaagtgatcc 151478 Query: 329 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 388 ||||| ||| ||||||||| ||||| || ||||||||||||||||||| || |||| Sbjct: 151479 tgcgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt--ttatacatc 151536 Query: 389 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 448 ||||||||||||||| | |||| |||||| ||||||||||| || ||| || | | Sbjct: 151537 ggtaggggagcgttctgtattagtttgaagcattagcgaaagcgggtgtggacaaaacag 151596 Query: 449 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 508 ||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||||| Sbjct: 151597 aagtgagaatgtcggcttaagtagcgaaaacattggtgagaatccaatgccccgaaaacc 151656 Query: 509 caaggtttcctccgcaagg 527 |||| |||||||| |||| Sbjct: 151657 taaggattcctccggaagg 151675 Score = 121 bits (61), Expect = 2e-24 Identities = 64/65 (98%) Strand = Plus / Plus Query: 48 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 107 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 189792 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctg 189851 Query: 108 aatac 112 ||||| Sbjct: 189852 aatac 189856 Score = 121 bits (61), Expect = 2e-24 Identities = 64/65 (98%) Strand = Plus / Plus Query: 48 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 107 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 151219 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactctg 151278 Query: 108 aatac 112 ||||| Sbjct: 151279 aatac 151283
>gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2604 Score = 307 bits (155), Expect = 2e-80 Identities = 319/371 (85%), Gaps = 2/371 (0%) Strand = Plus / Plus Query: 149 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 208 |||||||||||| |||||||||||||| | |||||||||| |||||||| || || | || Sbjct: 942 ccagtgagacgaagggggataagcttctttgtcgagaggggaacagcccagaccatcggc 1001 Query: 209 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 268 ||||||||| ||||| ||||| |||| |||||| ||||| |||| ||||||||||||| Sbjct: 1002 taaggcccccaaatggccgctaagtggcaaaggatgtgggagtgctcagacagccaggag 1061 Query: 269 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 328 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 1062 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcaagcgctcc 1121 Query: 329 tgcgctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgcat 387 |||| |||||||||||| || ||||| ||||||| || |||||||| |||| |||| Sbjct: 1122 cgcgccaaagatgaacgggactcaagcggcctgccgaggccatgggatgt-aaaaagcat 1180 Query: 388 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 447 ||||||||||||||||||| || ||||| |||| ||| || || ||||| ||| Sbjct: 1181 cggtaggggagcgttccgcggcaggttgaagcgtaagcgagagcaggcgtggacgaggcg 1240 Query: 448 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 507 |||| |||||||||||||||||||||| ||||| ||||||||||||| |||||||||||| Sbjct: 1241 gaagtgagaatgtcggcttgagtaacgcaaacactggtgagaatccagtgccccgaaaac 1300 Query: 508 ccaaggtttcc 518 |||||| |||| Sbjct: 1301 ccaagggttcc 1311 Score = 125 bits (63), Expect = 2e-25 Identities = 66/67 (98%) Strand = Plus / Plus Query: 47 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 106 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 857 aggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactct 916 Query: 107 gaatact 113 ||||||| Sbjct: 917 gaatact 923 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagc 30 |||||||||||||||||||||| Sbjct: 817 ccgaaatgcgttgaggcgcagc 838
>gb|AF393599.1| Klebsormidium subtilissimum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2901 Score = 307 bits (155), Expect = 2e-80 Identities = 319/371 (85%), Gaps = 2/371 (0%) Strand = Plus / Plus Query: 149 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 208 |||||||||||| |||||||||||||| | |||||||||| |||||||| || || | || Sbjct: 955 ccagtgagacgaagggggataagcttctttgtcgagaggggaacagcccagaccatcggc 1014 Query: 209 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 268 ||||||||| ||||| ||||| |||| |||||| ||||| |||| ||||||||||||| Sbjct: 1015 taaggcccccaaatggccgctaagtggcaaaggatgtgggagtgctcagacagccaggag 1074 Query: 269 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 328 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 1075 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcaagcgctcc 1134 Query: 329 tgcgctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgcat 387 |||| |||||||||||| || ||||| ||||||| || |||||||| |||| |||| Sbjct: 1135 cgcgccaaagatgaacgggactcaagcggcctgccgaggccatgggatgt-aaaaagcat 1193 Query: 388 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 447 ||||||||||||||||||| || ||||| |||| ||| || || ||||| ||| Sbjct: 1194 cggtaggggagcgttccgcggcaggttgaagcgtaagcgagagcaggcgtggacgaggcg 1253 Query: 448 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 507 |||| |||||||||||||||||||||| ||||| ||||||||||||| |||||||||||| Sbjct: 1254 gaagtgagaatgtcggcttgagtaacgcaaacactggtgagaatccagtgccccgaaaac 1313 Query: 508 ccaaggtttcc 518 |||||| |||| Sbjct: 1314 ccaagggttcc 1324 Score = 125 bits (63), Expect = 2e-25 Identities = 66/67 (98%) Strand = Plus / Plus Query: 47 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 106 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 870 aggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactct 929 Query: 107 gaatact 113 ||||||| Sbjct: 930 gaatact 936 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagc 30 |||||||||||||||||||||| Sbjct: 830 ccgaaatgcgttgaggcgcagc 851
>gb|AF393598.1| Klebsormidium flaccidum small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and 5S ribosomal RNA (rrf) gene, partial sequence; chloroplast genes for chloroplast products Length = 7627 Score = 307 bits (155), Expect = 2e-80 Identities = 319/371 (85%), Gaps = 2/371 (0%) Strand = Plus / Plus Query: 149 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 208 |||||||||||| |||||||||||||| | |||||||||| |||||||| || || | || Sbjct: 5529 ccagtgagacgaagggggataagcttctttgtcgagaggggaacagcccagaccatcggc 5588 Query: 209 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 268 ||||||||| ||||| ||||| |||| |||||| ||||| |||| ||||||||||||| Sbjct: 5589 taaggcccccaaatggccgctaagtggcaaaggatgtgggagtgctcagacagccaggag 5648 Query: 269 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 328 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 5649 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcaagcgctcc 5708 Query: 329 tgcgctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgcat 387 |||| |||||||||||| || ||||| ||||||| || |||||||| |||| |||| Sbjct: 5709 cgcgccaaagatgaacgggactcaagcggcctgccgaggccatgggatgt-aaaaagcat 5767 Query: 388 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 447 ||||||||||||||||||| || ||||| |||| ||| || || ||||| ||| Sbjct: 5768 cggtaggggagcgttccgcggcaggttgaagcgtaagcgagagcaggcgtggacgaggcg 5827 Query: 448 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 507 |||| |||||||||||||||||||||| ||||| ||||||||||||| |||||||||||| Sbjct: 5828 gaagtgagaatgtcggcttgagtaacgcaaacactggtgagaatccagtgccccgaaaac 5887 Query: 508 ccaaggtttcc 518 |||||| |||| Sbjct: 5888 ccaagggttcc 5898 Score = 125 bits (63), Expect = 2e-25 Identities = 66/67 (98%) Strand = Plus / Plus Query: 47 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 106 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 5444 aggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactct 5503 Query: 107 gaatact 113 ||||||| Sbjct: 5504 gaatact 5510 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagc 30 |||||||||||||||||||||| Sbjct: 5404 ccgaaatgcgttgaggcgcagc 5425
>gb|L42845.1|FRICPRGOL Friedmannia israeliensis large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2704 Score = 291 bits (147), Expect = 1e-75 Identities = 207/227 (91%) Strand = Plus / Plus Query: 149 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 208 ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 966 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcaccagc 1025 Query: 209 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 268 ||||||||||||||||||||| |||| ||||||||||| | ||| | ||| ||||||| Sbjct: 1026 taaggcccctaaatgaccgctaagtggtaaaggaggtgagaatgctgaaacaaccaggag 1085 Query: 269 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 328 |||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct: 1086 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtggagcgttct 1145 Query: 329 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 375 ||||| ||| ||||||||| ||||||| ||||||||||||||||||| Sbjct: 1146 tgcgccgaaaatgaacgggactaagcggtctgccgaagctgtgggat 1192 Score = 129 bits (65), Expect = 1e-26 Identities = 74/77 (96%) Strand = Plus / Plus Query: 443 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 502 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1299 aagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 1358 Query: 503 aaaacccaaggtttcct 519 |||||| |||| ||||| Sbjct: 1359 aaaacctaagggttcct 1375 Score = 105 bits (53), Expect = 1e-19 Identities = 97/111 (87%), Gaps = 3/111 (2%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagt---tgactggacatctaggggtaaagcactgtttc 65 |||||||||||||||||||||| || ||| || |||||||||||||||||||||| Sbjct: 840 ccgaaatgcgttgaggcgcagcggttaatgatgggcggtctaggggtaaagcactgtttc 899 Query: 66 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 116 ||||||||||||| |||||||||||||||| ||||||| |||||||||| Sbjct: 900 ggtgcgggctgcgagagcggtaccaaatcgtagcaaactaagaatactaga 950 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 386 atcggtaggggagcgttccgc 406 ||||||||||||||||||||| Sbjct: 1242 atcggtaggggagcgttccgc 1262
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 289 bits (146), Expect = 5e-75 Identities = 146/146 (100%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 146 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 87 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 27 Query: 129 ataacaggggtcaaggtcggccagtg 154 |||||||||||||||||||||||||| Sbjct: 26 ataacaggggtcaaggtcggccagtg 1
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 289 bits (146), Expect = 5e-75 Identities = 161/166 (96%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47084 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 47143 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgacccaaaa 128 |||||| ||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 47144 gcgggccgcgagagcggtaccaaatcgaggcaaactctgaatactagatatgacctccaa 47203 Query: 129 ataacaggggtcaaggtcggccagtgagacgatgggggataagctt 174 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47204 ataacaggggtcaaggtcggccagtgagacgatgggggataagctt 47249
>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome Length = 191028 Score = 289 bits (146), Expect = 5e-75 Identities = 320/377 (84%), Gaps = 2/377 (0%) Strand = Plus / Plus Query: 151 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 210 |||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||||| Sbjct: 188951 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagcta 189010 Query: 211 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 270 ||||||| |||| | || |||| |||||||||||| |||| ||||| ||||||||| Sbjct: 189011 aggccccaaaataattactaagtggcaaaggaggtgggaatgcatagacaaccaggaggt 189070 Query: 271 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 330 |||| |||||||||| | |||||||||||||||||||||||||||| || || | | || Sbjct: 189071 ttgcttagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagtgatcctg 189130 Query: 331 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 390 ||| ||| ||||||||| ||||| || ||||||||||||||||||| || |||||| Sbjct: 189131 cgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt--ttatacatcgg 189188 Query: 391 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 450 ||||||||||||| | |||| |||||| ||||||||||| || ||| || | ||| Sbjct: 189189 taggggagcgttctgtattaggttgaagcattagcgaaagcgggtgtggacaaaacagaa 189248 Query: 451 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccca 510 |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| | Sbjct: 189249 gcgagaatgtcggcttaagtagcgaaaacattggtgagaatccaatgccccgaaaaccta 189308 Query: 511 aggtttcctccgcaagg 527 ||| |||||||| |||| Sbjct: 189309 aggattcctccggaagg 189325 Score = 289 bits (146), Expect = 5e-75 Identities = 320/377 (84%), Gaps = 2/377 (0%) Strand = Plus / Plus Query: 151 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 210 |||||||| ||||||||||||||||| ||| ||||||||||||||| || ||||||||| Sbjct: 150508 agtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccagcta 150567 Query: 211 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 270 ||||||| |||| | || |||| |||||||||||| |||| ||||| ||||||||| Sbjct: 150568 aggccccaaaataattactaagtggcaaaggaggtgggaatgcatagacaaccaggaggt 150627 Query: 271 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 330 |||| |||||||||| | |||||||||||||||||||||||||||| || || | | || Sbjct: 150628 ttgcttagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagtgatcctg 150687 Query: 331 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 390 ||| ||| ||||||||| ||||| || ||||||||||||||||||| || |||||| Sbjct: 150688 cgccgaaaatgaacgggactaagtaatttgccgaagctgtgggatgt--ttatacatcgg 150745 Query: 391 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 450 ||||||||||||| | |||| |||||| ||||||||||| || ||| || | ||| Sbjct: 150746 taggggagcgttctgtattaggttgaagcattagcgaaagcgggtgtggacaaaacagaa 150805 Query: 451 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccca 510 |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| | Sbjct: 150806 gcgagaatgtcggcttaagtagcgaaaacattggtgagaatccaatgccccgaaaaccta 150865 Query: 511 aggtttcctccgcaagg 527 ||| |||||||| |||| Sbjct: 150866 aggattcctccggaagg 150882 Score = 129 bits (65), Expect = 1e-26 Identities = 68/69 (98%) Strand = Plus / Plus Query: 46 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 105 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 188867 taggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactc 188926 Query: 106 tgaatacta 114 ||||||||| Sbjct: 188927 tgaatacta 188935 Score = 129 bits (65), Expect = 1e-26 Identities = 68/69 (98%) Strand = Plus / Plus Query: 46 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 105 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 150424 taggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactc 150483 Query: 106 tgaatacta 114 ||||||||| Sbjct: 150484 tgaatacta 150492
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 276 bits (139), Expect = 7e-71 Identities = 232/262 (88%), Gaps = 2/262 (0%) Strand = Plus / Plus Query: 145 tcggccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcac 204 |||||||||||||| ||||||||||||||||| ||| ||||||||||||||| |||||| Sbjct: 948 tcggccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcac 1007 Query: 205 cagctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagcca 264 ||||||||||||| |||| |||||||||||||||||| ||| | |||| ||||| ||| Sbjct: 1008 cagctaaggccccagaatggccgctcagtgataaaggatgtgagagtgcccagacaacca 1067 Query: 265 ggaggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcg 324 |||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||| Sbjct: 1068 ggaggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcg 1127 Query: 325 cccttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg 384 | ||||||| ||| ||||||||| ||||||| |||||||||||||| |||| || Sbjct: 1128 ctcttgcgccgaaaatgaacgggactaagcggcctgccgaagctgtgagatggtgaa--t 1185 Query: 385 catcggtaggggagcgttccgc 406 |||||||||||||||||||||| Sbjct: 1186 catcggtaggggagcgttccgc 1207 Score = 113 bits (57), Expect = 6e-22 Identities = 75/81 (92%) Strand = Plus / Plus Query: 439 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 498 ||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1240 gacgaggcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1299 Query: 499 cccgaaaacccaaggtttcct 519 ||||||||| |||| ||||| Sbjct: 1300 tccgaaaacctaagggttcct 1320 Score = 99.6 bits (50), Expect = 9e-18 Identities = 65/70 (92%) Strand = Plus / Plus Query: 44 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 103 ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| Sbjct: 864 tctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaac 923 Query: 104 tctgaatact 113 | ||||||| Sbjct: 924 taagaatact 933
>gb|AY741371.1| Emiliania huxleyi strain CCMP 373 chloroplast, complete genome Length = 105309 Score = 274 bits (138), Expect = 3e-70 Identities = 318/377 (84%), Gaps = 2/377 (0%) Strand = Plus / Minus Query: 151 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 210 |||||||| || ||||||||||||| ||| ||||||||||||||| ||| ||||| || Sbjct: 18092 agtgagacattgagggataagcttcaatgtcaagagggaaacagcccagattaccagtta 18033 Query: 211 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 270 |||||||||||| | || |||||||||||||||||| ||||| ||||| |||||||| Sbjct: 18032 aggcccctaaataattactaagtgataaaggaggtgggagtgcatagacaatcaggaggt 17973 Query: 271 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 330 ||||||||||||||| | |||||||||||||||||||||||||||| ||||| || | || Sbjct: 17972 ttgcctagaagcagcaatcctttaaagagtgcgtaatagctcactgttcgagtgctcctg 17913 Query: 331 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 390 ||| ||| ||||| ||| ||||| || |||||||||||| ||||| |||| |||||| Sbjct: 17912 cgccgaaaatgaatgggactaagtaatttgccgaagctgtaagatgttaaaa--catcgg 17855 Query: 391 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 450 ||||||||||||| | |||| ||||| ||| ||||||| || ||| | | ||| Sbjct: 17854 taggggagcgttctacattagtttgaagcgttagcggaagcgggcgtggacaaggtagaa 17795 Query: 451 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccca 510 | |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 17794 gtgagaatgttagcttgagtagcgaaaacattggtgagaatccaatgccccgaaaaccca 17735 Query: 511 aggtttcctccgcaagg 527 ||| |||||||| |||| Sbjct: 17734 agggttcctccggaagg 17718 Score = 274 bits (138), Expect = 3e-70 Identities = 318/377 (84%), Gaps = 2/377 (0%) Strand = Plus / Plus Query: 151 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 210 |||||||| || ||||||||||||| ||| ||||||||||||||| ||| ||||| || Sbjct: 2774 agtgagacattgagggataagcttcaatgtcaagagggaaacagcccagattaccagtta 2833 Query: 211 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 270 |||||||||||| | || |||||||||||||||||| ||||| ||||| |||||||| Sbjct: 2834 aggcccctaaataattactaagtgataaaggaggtgggagtgcatagacaatcaggaggt 2893 Query: 271 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 330 ||||||||||||||| | |||||||||||||||||||||||||||| ||||| || | || Sbjct: 2894 ttgcctagaagcagcaatcctttaaagagtgcgtaatagctcactgttcgagtgctcctg 2953 Query: 331 cgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcgg 390 ||| ||| ||||| ||| ||||| || |||||||||||| ||||| |||| |||||| Sbjct: 2954 cgccgaaaatgaatgggactaagtaatttgccgaagctgtaagatgttaaaa--catcgg 3011 Query: 391 taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 450 ||||||||||||| | |||| ||||| ||| ||||||| || ||| | | ||| Sbjct: 3012 taggggagcgttctacattagtttgaagcgttagcggaagcgggcgtggacaaggtagaa 3071 Query: 451 gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccca 510 | |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 3072 gtgagaatgttagcttgagtagcgaaaacattggtgagaatccaatgccccgaaaaccca 3131 Query: 511 aggtttcctccgcaagg 527 ||| |||||||| |||| Sbjct: 3132 agggttcctccggaagg 3148 Score = 99.6 bits (50), Expect = 9e-18 Identities = 66/70 (94%), Gaps = 1/70 (1%) Strand = Plus / Minus Query: 46 taggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 104 |||||||||||| ||||||| ||||||||||||| ||||||||||||||| ||||||||| Sbjct: 18178 taggggtaaagctactgttttggtgcgggctgcgagagcggtaccaaatcaaggcaaact 18119 Query: 105 ctgaatacta 114 |||||||||| Sbjct: 18118 ctgaatacta 18109 Score = 99.6 bits (50), Expect = 9e-18 Identities = 66/70 (94%), Gaps = 1/70 (1%) Strand = Plus / Plus Query: 46 taggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 104 |||||||||||| ||||||| ||||||||||||| ||||||||||||||| ||||||||| Sbjct: 2688 taggggtaaagctactgttttggtgcgggctgcgagagcggtaccaaatcaaggcaaact 2747 Query: 105 ctgaatacta 114 |||||||||| Sbjct: 2748 ctgaatacta 2757 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagc 30 |||||||||||||||||||||| Sbjct: 18216 ccgaaatgcgttgaggcgcagc 18195 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagc 30 |||||||||||||||||||||| Sbjct: 2650 ccgaaatgcgttgaggcgcagc 2671
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 272 bits (137), Expect = 1e-69 Identities = 203/225 (90%) Strand = Plus / Plus Query: 148 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 207 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 569 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 628 Query: 208 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 267 |||||| ||| ||||| ||||||||||| ||||||||||| ||||| ||||| |||||| Sbjct: 629 ctaaggtccccaaatggtcgctcagtgattaaggaggtgggagtgcacagacaaccagga 688 Query: 268 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 327 |||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 689 ggtttgcctagaagcagcaatccttgaaagagtgcgtaatagctcactggtcaagcgctc 748 Query: 328 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 372 ||||| ||| |||||||||||||||||| ||||||||||||||| Sbjct: 749 ctgcgccgaaaatgaacggggctaagcgacctgccgaagctgtgg 793 Score = 97.6 bits (49), Expect = 4e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 48 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 107 |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 490 ggggtaaagcactgtttcggtgcgggctgcctcagcggtaccaaatcgagacaaactctg 549 Query: 108 aatac 112 ||||| Sbjct: 550 aatac 554 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 448 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 507 |||| ||||||||||||||||||| |||||| ||| ||||||| |||||||| | Sbjct: 873 gaagtgagaatgtcggcttgagtagcgaaaattagggtaagaatccctaaccccgaaacc 932 Query: 508 ccaaggtttcctccgcaagg 527 |||||| ||||||||||||| Sbjct: 933 ccaagggttcctccgcaagg 952
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 268 bits (135), Expect = 2e-68 Identities = 204/227 (89%) Strand = Plus / Plus Query: 149 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 208 ||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||| Sbjct: 1103 ccagtgagacggtgggggataagcttcatcgtcgaaagggaaacagcccagatcaccagc 1162 Query: 209 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 268 |||||||||| |||| ||||| |||| ||||||||||| | |||| | ||| ||||||| Sbjct: 1163 taaggcccctcaatggccgctaagtggtaaaggaggtgagaatgcagaaacaaccaggag 1222 Query: 269 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 328 |||||| |||||||||| |||||||||||||||||||||||||||||| | ||||| || Sbjct: 1223 gtttgcttagaagcagcaaccctttaaagagtgcgtaatagctcactggtggagcgttct 1282 Query: 329 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 375 ||||| ||| ||||||||| ||||||| ||||||||||||||||||| Sbjct: 1283 tgcgccgaaaatgaacgggactaagcggtctgccgaagctgtgggat 1329 Score = 159 bits (80), Expect = 1e-35 Identities = 122/136 (89%) Strand = Plus / Plus Query: 386 atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 445 ||||||||||||||||||||| ||| | |||||| | |||||| || || ||||||| Sbjct: 1410 atcggtaggggagcgttccgctctagggtgaagcatcaacgaaagtaggtgtggacgaag 1469 Query: 446 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 505 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1470 cggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 1529 Query: 506 acccaaggtttcctcc 521 ||| |||| ||||||| Sbjct: 1530 acctaaggattcctcc 1545 Score = 117 bits (59), Expect = 4e-23 Identities = 100/111 (90%), Gaps = 2/111 (1%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgac-tggaca-tctaggggtaaagcactgtttcg 66 |||||||||||||||||||||| ||| || ||| | ||||||||||||||||||||||| Sbjct: 978 ccgaaatgcgttgaggcgcagcggttaacgtgggcggtctaggggtaaagcactgtttcg 1037 Query: 67 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagat 117 |||||||||||| |||||||||||||||| ||||||| ||||||||||| Sbjct: 1038 gtgcgggctgcgagagcggtaccaaatcgtagcaaactaagaatactagat 1088
>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial sequence; chloroplast Length = 2661 Score = 268 bits (135), Expect = 2e-68 Identities = 201/223 (90%) Strand = Plus / Plus Query: 149 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 208 ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 960 ccagtgagacgatgggggataagcttcatcgtcaagagggaaacagcccagatcaccagc 1019 Query: 209 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 268 ||||||||||||||| ||||| |||||||||||||||| | ||| | ||| ||||||| Sbjct: 1020 taaggcccctaaatggccgctaagtgataaaggaggtgagaatgctgaaacaaccaggag 1079 Query: 269 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 328 |||||| ||||||||||||||||| ||||||||||||||||||||||| | ||||| || Sbjct: 1080 gtttgcttagaagcagccacccttaaaagagtgcgtaatagctcactggtggagcgttct 1139 Query: 329 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 371 ||||| ||| ||||||||| ||||||| |||||||||||||| Sbjct: 1140 tgcgccgaaaatgaacgggactaagcggcctgccgaagctgtg 1182 Score = 133 bits (67), Expect = 6e-28 Identities = 79/83 (95%) Strand = Plus / Plus Query: 439 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 498 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1268 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1327 Query: 499 cccgaaaacccaaggtttcctcc 521 |||||||||| |||| ||||||| Sbjct: 1328 cccgaaaacctaagggttcctcc 1350 Score = 121 bits (61), Expect = 2e-24 Identities = 100/111 (90%), Gaps = 4/111 (3%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgac---tggac-atctaggggtaaagcactgttt 64 |||||||||||||||||||||| |||||| ||| | |||||||||||||||||||||| Sbjct: 832 ccgaaatgcgttgaggcgcagcggttgacgaatgggctatctaggggtaaagcactgttt 891 Query: 65 cggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 115 |||||||||||||| |||||||||||||||| ||||||| ||||||||| Sbjct: 892 cggtgcgggctgcgagagcggtaccaaatcgtagcaaactaagaatactag 942 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 386 atcggtaggggagcgttccgc 406 ||||||||||||||||||||| Sbjct: 1215 atcggtaggggagcgttccgc 1235
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 262 bits (132), Expect = 1e-66 Identities = 201/224 (89%) Strand = Plus / Plus Query: 148 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 207 |||||||||||| ||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagatcaccat 1003 Query: 208 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 267 |||||||||| ||||||||||| |||| ||||||||| | ||||||||||| |||||| Sbjct: 1004 ctaaggccccaaaatgaccgctaagtggcaaaggaggtaagagtgcaaagacaaccagga 1063 Query: 268 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 327 ||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 1064 ggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctc 1123 Query: 328 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 371 | |||| ||| | ||||||| ||||||| |||||||||| |||| Sbjct: 1124 tcgcgccgaaaacgaacgggactaagcggtctgccgaagttgtg 1167 Score = 167 bits (84), Expect = 5e-38 Identities = 126/140 (90%) Strand = Plus / Plus Query: 388 cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 447 ||||||||||||||||||| ||| | |||||| | |||||||| || || ||||||||| Sbjct: 1192 cggtaggggagcgttccgctctagggtgaagcatcagcgaaagcaggtgtggacgaagcg 1251 Query: 448 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 507 |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 1252 gaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaacc 1311 Query: 508 ccaaggtttcctccgcaagg 527 | |||| ||||||||||||| Sbjct: 1312 ctaagggttcctccgcaagg 1331 Score = 103 bits (52), Expect = 6e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 43 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 102 |||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||| Sbjct: 859 atctaggggtaaagcactgtatcggtgcgggctgcgaaagcggtaccaaatcgtaacaaa 918 Query: 103 ctctgaatactagata 118 |||||||||||||||| Sbjct: 919 ctctgaatactagata 934 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagc 30 |||||||||||||||||||||| Sbjct: 821 ccgaaatgcgttgaggcgcagc 842
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 252 bits (127), Expect = 1e-63 Identities = 329/395 (83%), Gaps = 6/395 (1%) Strand = Plus / Plus Query: 125 aaaaataacaggggtcaaggtcggccagtgagacgatgggggataagcttcatcgtcgag 184 ||||||||||||| | | ||| | |||||||||| | ||||||||||||||||||||||| Sbjct: 944 aaaaataacagggataagggtggaccagtgagaccacgggggataagcttcatcgtcgag 1003 Query: 185 agggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaaggagg 244 |||| |||| || |||||| ||||||| |||||||||||||||| ||| |||||||||| Sbjct: 1004 aggggaacattccagatcactagctaagccccctaaatgaccgctaagttataaaggagg 1063 Query: 245 tgggggtgcaaagacagccaggaggtttgcctagaagcagccaccctttaaagagtgcgt 304 | ||||||| ||||| |||||||||||||||||||| ||||||||||||||| |||| | Sbjct: 1064 t-agggtgcatagacatccaggaggtttgcctagaagaagccaccctttaaagcgtgcat 1122 Query: 305 aatagctcactgatcgagcgcccttgcgctgaagatgaacggggctaagcgatctgccga 364 ||||||| ||||| | || ||||| | ||| ||||||| | |||| |||| | ||| Sbjct: 1123 aatagctaactgacaaacagctcttgcaccgaaaatgaacgagaataagagatccgtcga 1182 Query: 365 agctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaagcaaccg 424 ||||||||||||| |||||||||||||||||||| ||||| ||||||||| | | Sbjct: 1183 agctgtgggatgt-----agcatcggtaggggagcgttcttccttatagggaagcacctg 1237 Query: 425 cgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattgg 484 | ||| | || || ||||| |||| ||||||||||||||||||||| ||||||||| Sbjct: 1238 cacgagcagttgtggatgaagcagaagtgagaatgtcggcttgagtaacacaaacattgg 1297 Query: 485 tgagaatccaatgccccgaaaacccaaggtttcct 519 ||||||||||| |||| |||||| |||| ||||| Sbjct: 1298 cgagaatccaattccccaaaaacctaagggttcct 1332 Score = 107 bits (54), Expect = 4e-20 Identities = 100/114 (87%), Gaps = 1/114 (0%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 ||||||||| || ||||||||||||| || || ||||||||||||||||| ||||| ||| Sbjct: 820 ccgaaatgcatttaggcgcagcagtt-accgggcatctaggggtaaagcattgttttggt 878 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactagatatgac 122 ||||| || |||||||||||||| |||||| ||| ||||||||||||||||| Sbjct: 879 gcgggtcacgagagcggtaccaaattgaggcagactatgaatactagatatgac 932
>gb|L42862.1|PNFCPRGOL Pycnococcus sp. CCMP 1203 large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2664 Score = 252 bits (127), Expect = 1e-63 Identities = 227/259 (87%), Gaps = 1/259 (0%) Strand = Plus / Plus Query: 148 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 207 ||||||||||| ||||||||||||| ||| ||||||||||||||||||| || || | | Sbjct: 954 gccagtgagactgtgggggataagctccattgtcgagagggaaacagcccagaccatcgg 1013 Query: 208 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 267 ||||||||||||||||| || |||||||||||||||| | |||| ||||| |||||| Sbjct: 1014 ctaaggcccctaaatgattactaagtgataaaggaggtgagagtgcccagacaaccagga 1073 Query: 268 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 327 ||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 1074 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctc 1133 Query: 328 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg-ca 386 |||||| ||| ||||||||| ||||| |||||||||||||||||||| ||| || | Sbjct: 1134 ttgcgccgaaaatgaacgggactaagtaatctgccgaagctgtgggataacaatttgtta 1193 Query: 387 tcggtaggggagcgttccg 405 ||||||||||||||||||| Sbjct: 1194 tcggtaggggagcgttccg 1212 Score = 97.6 bits (49), Expect = 4e-17 Identities = 67/73 (91%) Strand = Plus / Plus Query: 44 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 103 |||||||||| |||||||| ||||||||||||||| |||||||||||||||| |||||| Sbjct: 869 tctaggggtagagcactgtctcggtgcgggctgcgagagcggtaccaaatcgtagcaaac 928 Query: 104 tctgaatactaga 116 || |||||||||| Sbjct: 929 tccgaatactaga 941 Score = 81.8 bits (41), Expect = 2e-12 Identities = 69/77 (89%), Gaps = 1/77 (1%) Strand = Plus / Plus Query: 446 cggaagcgagaatgtcggcttgagtaacgaaaacattggtga-gaatccaatgccccgaa 504 |||||| |||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 1252 cggaagtgagaatgtcggcttgagtaacgaaaacaggggtgatgaatcccctgccccgaa 1311 Query: 505 aacccaaggtttcctcc 521 | ||||||| ||||||| Sbjct: 1312 agcccaagggttcctcc 1328 Score = 48.1 bits (24), Expect = 0.029 Identities = 27/28 (96%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttga 36 |||||||||||||||||||||| ||||| Sbjct: 830 ccgaaatgcgttgaggcgcagcggttga 857
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 250 bits (126), Expect = 4e-63 Identities = 198/222 (89%) Strand = Plus / Minus Query: 149 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 208 ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||| |||||| Sbjct: 170531 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagattaccagc 170472 Query: 209 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 268 ||||||||| ||||| |||||||||| |||||||||| | |||| ||||| ||||||| Sbjct: 170471 taaggccccaaaatggccgctcagtggcaaaggaggtgagagtgcccagacaaccaggag 170412 Query: 269 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 328 ||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| || Sbjct: 170411 gtttgcctagaagcagccatccttcaaagagtgcgtaatagctcactggtcaagcgctct 170352 Query: 329 tgcgctgaagatgaacggggctaagcgatctgccgaagctgt 370 |||| ||| ||||||||| ||||||| ||||||||||||| Sbjct: 170351 cgcgccgaaaatgaacgggactaagcggcctgccgaagctgt 170310 Score = 250 bits (126), Expect = 4e-63 Identities = 198/222 (89%) Strand = Plus / Plus Query: 149 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 208 ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||| |||||| Sbjct: 122395 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagattaccagc 122454 Query: 209 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 268 ||||||||| ||||| |||||||||| |||||||||| | |||| ||||| ||||||| Sbjct: 122455 taaggccccaaaatggccgctcagtggcaaaggaggtgagagtgcccagacaaccaggag 122514 Query: 269 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 328 ||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| || Sbjct: 122515 gtttgcctagaagcagccatccttcaaagagtgcgtaatagctcactggtcaagcgctct 122574 Query: 329 tgcgctgaagatgaacggggctaagcgatctgccgaagctgt 370 |||| ||| ||||||||| ||||||| ||||||||||||| Sbjct: 122575 cgcgccgaaaatgaacgggactaagcggcctgccgaagctgt 122616 Score = 101 bits (51), Expect = 2e-18 Identities = 111/131 (84%) Strand = Plus / Minus Query: 389 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 448 |||||||||||||||||||| || | ||||| | || ||| || ||| ||| | |||| Sbjct: 170294 ggtaggggagcgttccgcctgagggagaagctattccggaaggggtggtggacaaggcgg 170235 Query: 449 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 508 ||| |||||||||||||||||||||| |||| |||||||||||||| |||||||||||| Sbjct: 170234 aagtgagaatgtcggcttgagtaacgcaaacgctggtgagaatccaacgccccgaaaacc 170175 Query: 509 caaggtttcct 519 |||| ||||| Sbjct: 170174 taagggttcct 170164 Score = 101 bits (51), Expect = 2e-18 Identities = 111/131 (84%) Strand = Plus / Plus Query: 389 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 448 |||||||||||||||||||| || | ||||| | || ||| || ||| ||| | |||| Sbjct: 122632 ggtaggggagcgttccgcctgagggagaagctattccggaaggggtggtggacaaggcgg 122691 Query: 449 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 508 ||| |||||||||||||||||||||| |||| |||||||||||||| |||||||||||| Sbjct: 122692 aagtgagaatgtcggcttgagtaacgcaaacgctggtgagaatccaacgccccgaaaacc 122751 Query: 509 caaggtttcct 519 |||| ||||| Sbjct: 122752 taagggttcct 122762 Score = 93.7 bits (47), Expect = 6e-16 Identities = 62/67 (92%) Strand = Plus / Minus Query: 47 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 106 |||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 170617 aggggtaaagcactgtctcggtgcgggctgcgaaagcggtaccaaatcgtagcaaactct 170558 Query: 107 gaatact 113 ||||||| Sbjct: 170557 gaatact 170551 Score = 93.7 bits (47), Expect = 6e-16 Identities = 62/67 (92%) Strand = Plus / Plus Query: 47 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 106 |||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 122309 aggggtaaagcactgtctcggtgcgggctgcgaaagcggtaccaaatcgtagcaaactct 122368 Query: 107 gaatact 113 ||||||| Sbjct: 122369 gaatact 122375 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagc 30 |||||||||||||||||||||| Sbjct: 170676 ccgaaatgcgttgaggcgcagc 170655 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagc 30 |||||||||||||||||||||| Sbjct: 122250 ccgaaatgcgttgaggcgcagc 122271
>gb|AY335547.1| Aphanizomenon ovalisporum strain ILC-146 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3434 Score = 250 bits (126), Expect = 4e-63 Identities = 225/258 (87%) Strand = Plus / Plus Query: 148 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 207 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 2649 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 2708 Query: 208 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 267 |||||| ||| |||| | | || |||||||||||||||||| ||||| ||||| | |||| Sbjct: 2709 ctaaggtccccaaatcatcactaagtgataaaggaggtgggagtgcacagacaactagga 2768 Query: 268 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 327 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 2769 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgctc 2828 Query: 328 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcat 387 ||||| ||| ||||||||||||||| ||| | ||||||||||||||| |||| || Sbjct: 2829 ctgcgccgaaaatgaacggggctaagtgatgtaccgaagctgtgggattaagaaattaat 2888 Query: 388 cggtaggggagcgttccg 405 |||||||||||||||||| Sbjct: 2889 cggtaggggagcgttccg 2906 Score = 99.6 bits (50), Expect = 9e-18 Identities = 65/70 (92%) Strand = Plus / Plus Query: 453 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 512 ||||||||||||||||||| || |||||||||||||||||||||||||||||| || ||| Sbjct: 2955 gagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaaccctaag 3014 Query: 513 gtttcctccg 522 | |||||||| Sbjct: 3015 ggttcctccg 3024 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 48 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 107 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 2570 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 2629 Query: 108 aatac 112 ||||| Sbjct: 2630 aatac 2634
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 250 bits (126), Expect = 4e-63 Identities = 198/222 (89%) Strand = Plus / Plus Query: 149 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 208 ||||||||||| ||||||||||||||||||||| ||||||||||||||| ||| |||||| Sbjct: 986 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagattaccagc 1045 Query: 209 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 268 ||||||||| ||||| |||||||||| |||||||||| | |||| ||||| ||||||| Sbjct: 1046 taaggccccaaaatggccgctcagtggcaaaggaggtgagagtgcccagacaaccaggag 1105 Query: 269 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 328 ||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| || Sbjct: 1106 gtttgcctagaagcagccatccttgaaagagtgcgtaatagctcactggtcaagcgctct 1165 Query: 329 tgcgctgaagatgaacggggctaagcgatctgccgaagctgt 370 |||| ||| ||||||||| ||||||| ||||||||||||| Sbjct: 1166 cgcgccgaaaatgaacgggactaagcggcctgccgaagctgt 1207 Score = 101 bits (51), Expect = 2e-18 Identities = 111/131 (84%) Strand = Plus / Plus Query: 389 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 448 |||||||||||||||||||| || | ||||| | || ||| || ||| ||| | |||| Sbjct: 1223 ggtaggggagcgttccgcctgagggagaagctattccggaaggggtggtggacaaggcgg 1282 Query: 449 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 508 ||| |||||||||||||||||||||| |||| |||||||||||||| |||||||||||| Sbjct: 1283 aagtgagaatgtcggcttgagtaacgcaaacgctggtgagaatccaacgccccgaaaacc 1342 Query: 509 caaggtttcct 519 |||| ||||| Sbjct: 1343 taagggttcct 1353 Score = 93.7 bits (47), Expect = 6e-16 Identities = 62/67 (92%) Strand = Plus / Plus Query: 47 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 106 |||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 900 aggggtaaagcactgtctcggtgcgggctgcgaaagcggtaccaaatcgtagcaaactct 959 Query: 107 gaatact 113 ||||||| Sbjct: 960 gaatact 966 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagc 30 |||||||||||||||||||||| Sbjct: 841 ccgaaatgcgttgaggcgcagc 862
>gb|AY584518.1| Oscillatoria sp. strain PCC 6506 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 248 bits (125), Expect = 2e-62 Identities = 201/225 (89%), Gaps = 1/225 (0%) Strand = Plus / Plus Query: 148 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 207 |||||| ||||| ||||||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 567 gccagtcagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccag 626 Query: 208 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 267 |||||| ||| ||||||| ||| |||||||||||||||| | ||||| |||| |||||| Sbjct: 627 ctaaggtccccaaatgactgctaagtgataaaggaggtgagagtgcactgacaaccagga 686 Query: 268 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 327 ||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 687 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctc 746 Query: 328 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 372 || ||| ||| |||||||||||||||| ||| |||||||||||| Sbjct: 747 tt-cgccgaaaatgaacggggctaagcagtctaccgaagctgtgg 790 Score = 113 bits (57), Expect = 6e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 48 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 107 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 108 aatac 112 ||||| Sbjct: 548 aatac 552 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Plus Query: 445 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 504 ||||||| ||||||||||||||||||| || ||| | ||||||||||| | ||||||| Sbjct: 863 gcggaagtgagaatgtcggcttgagtagcgcaaatgtaggtgagaatcctacaccccgaa 922 Query: 505 aacccaaggtttcc 518 | || |||| |||| Sbjct: 923 accctaagggttcc 936
>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5398 Score = 248 bits (125), Expect = 2e-62 Identities = 200/225 (88%) Strand = Plus / Plus Query: 149 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 208 ||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 1090 ccagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagatcaccagc 1149 Query: 209 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 268 ||||||||| ||||||||||| |||| |||||| ||| | ||| | ||| |||| || Sbjct: 1150 taaggccccaaaatgaccgctaagtggcaaaggatgtgagaatgctgaaacaaccagaag 1209 Query: 269 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 328 |||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct: 1210 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtagagcgttct 1269 Query: 329 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtggg 373 ||||| ||| ||||||||| ||||||| ||||||||||||||||| Sbjct: 1270 tgcgccgaaaatgaacgggactaagcggtctgccgaagctgtggg 1314 Score = 133 bits (67), Expect = 6e-28 Identities = 76/79 (96%) Strand = Plus / Plus Query: 443 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 502 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1394 aagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 1453 Query: 503 aaaacccaaggtttcctcc 521 |||||| |||| ||||||| Sbjct: 1454 aaaacctaaggcttcctcc 1472 Score = 111 bits (56), Expect = 2e-21 Identities = 99/111 (89%), Gaps = 3/111 (2%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgac--tggaca-tctaggggtaaagcactgtttc 65 |||||||||||||||||||||| ||| || ||| | |||||||||||||||||||||| Sbjct: 963 ccgaaatgcgttgaggcgcagcggttaacgatgggctgtctaggggtaaagcactgtttc 1022 Query: 66 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 116 ||||||||||||| |||||||||||||||| ||||||| |||||||||| Sbjct: 1023 ggtgcgggctgcgagagcggtaccaaatcgtagcaaactaagaatactaga 1073
>gb|AY584508.1| Anabaena sphaerica strain UUTEX B 1616 23S ribosomal RNA gene, partial sequence Length = 2389 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 148 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 207 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 208 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 267 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 685 Query: 268 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 327 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 745 Query: 328 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 375 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 746 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 793 Score = 97.6 bits (49), Expect = 4e-17 Identities = 67/73 (91%) Strand = Plus / Plus Query: 446 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 505 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 867 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 926 Query: 506 acccaaggtttcc 518 || |||| |||| Sbjct: 927 ccctaagggttcc 939 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 48 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 107 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 546 Query: 108 aatac 112 ||||| Sbjct: 547 aatac 551
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Minus Query: 148 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 207 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 5434418 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 5434359 Query: 208 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 267 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 5434358 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 5434299 Query: 268 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 327 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 5434298 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 5434239 Query: 328 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 375 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 5434238 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 5434191 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 148 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 207 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 3897020 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 3897079 Query: 208 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 267 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 3897080 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 3897139 Query: 268 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 327 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 3897140 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 3897199 Query: 328 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 375 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 3897200 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 3897247 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Minus Query: 148 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 207 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 2807139 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 2807080 Query: 208 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 267 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 2807079 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 2807020 Query: 268 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 327 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 2807019 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 2806960 Query: 328 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 375 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 2806959 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 2806912 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 148 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 207 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 1005863 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 1005922 Query: 208 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 267 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 1005923 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 1005982 Query: 268 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 327 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 1005983 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 1006042 Query: 328 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 375 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 1006043 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 1006090 Score = 97.6 bits (49), Expect = 4e-17 Identities = 67/73 (91%) Strand = Plus / Minus Query: 446 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 505 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 5434116 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 5434057 Query: 506 acccaaggtttcc 518 || |||| |||| Sbjct: 5434056 ccctaagggttcc 5434044 Score = 97.6 bits (49), Expect = 4e-17 Identities = 67/73 (91%) Strand = Plus / Plus Query: 446 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 505 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 3897322 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 3897381 Query: 506 acccaaggtttcc 518 || |||| |||| Sbjct: 3897382 ccctaagggttcc 3897394 Score = 97.6 bits (49), Expect = 4e-17 Identities = 67/73 (91%) Strand = Plus / Minus Query: 446 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 505 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 2806837 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 2806778 Query: 506 acccaaggtttcc 518 || |||| |||| Sbjct: 2806777 ccctaagggttcc 2806765 Score = 97.6 bits (49), Expect = 4e-17 Identities = 67/73 (91%) Strand = Plus / Plus Query: 446 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 505 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 1006165 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 1006224 Query: 506 acccaaggtttcc 518 || |||| |||| Sbjct: 1006225 ccctaagggttcc 1006237 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 48 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 107 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 5434497 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 5434438 Query: 108 aatac 112 ||||| Sbjct: 5434437 aatac 5434433 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 48 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 107 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 3896941 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 3897000 Query: 108 aatac 112 ||||| Sbjct: 3897001 aatac 3897005 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 48 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 107 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 2807218 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 2807159 Query: 108 aatac 112 ||||| Sbjct: 2807158 aatac 2807154 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 48 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 107 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 1005784 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 1005843 Query: 108 aatac 112 ||||| Sbjct: 1005844 aatac 1005848
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Minus Query: 148 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 207 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 5944458 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 5944399 Query: 208 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 267 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 5944398 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 5944339 Query: 268 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 327 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 5944338 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 5944279 Query: 328 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 375 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 5944278 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 5944231 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Minus Query: 148 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 207 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 4916814 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 4916755 Query: 208 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 267 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 4916754 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 4916695 Query: 268 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 327 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 4916694 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 4916635 Query: 328 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 375 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 4916634 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 4916587 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 148 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 207 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 2503482 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 2503541 Query: 208 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 267 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 2503542 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 2503601 Query: 268 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 327 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 2503602 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 2503661 Query: 328 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 375 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 2503662 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 2503709 Score = 246 bits (124), Expect = 6e-62 Identities = 202/228 (88%) Strand = Plus / Plus Query: 148 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 207 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 2378691 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 2378750 Query: 208 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 267 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 2378751 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 2378810 Query: 268 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 327 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 2378811 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 2378870 Query: 328 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 375 |||||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 2378871 ttgcgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 2378918 Score = 97.6 bits (49), Expect = 4e-17 Identities = 67/73 (91%) Strand = Plus / Minus Query: 446 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 505 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 5944159 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 5944100 Query: 506 acccaaggtttcc 518 || |||| |||| Sbjct: 5944099 ccctaagggttcc 5944087 Score = 97.6 bits (49), Expect = 4e-17 Identities = 67/73 (91%) Strand = Plus / Minus Query: 446 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 505 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 4916515 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 4916456 Query: 506 acccaaggtttcc 518 || |||| |||| Sbjct: 4916455 ccctaagggttcc 4916443 Score = 97.6 bits (49), Expect = 4e-17 Identities = 67/73 (91%) Strand = Plus / Plus Query: 446 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 505 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 2503781 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 2503840 Query: 506 acccaaggtttcc 518 || |||| |||| Sbjct: 2503841 ccctaagggttcc 2503853 Score = 97.6 bits (49), Expect = 4e-17 Identities = 67/73 (91%) Strand = Plus / Plus Query: 446 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 505 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 2380461 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 2380520 Query: 506 acccaaggtttcc 518 || |||| |||| Sbjct: 2380521 ccctaagggttcc 2380533 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 48 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 107 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 5944537 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 5944478 Query: 108 aatac 112 ||||| Sbjct: 5944477 aatac 5944473 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 48 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 107 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 4916893 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 4916834 Query: 108 aatac 112 ||||| Sbjct: 4916833 aatac 4916829 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 48 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 107 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 2503403 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 2503462 Query: 108 aatac 112 ||||| Sbjct: 2503463 aatac 2503467 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 48 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 107 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 2378612 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 2378671 Query: 108 aatac 112 ||||| Sbjct: 2378672 aatac 2378676
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 244 bits (123), Expect = 2e-61 Identities = 198/223 (88%) Strand = Plus / Plus Query: 149 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 208 |||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 972 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagt 1031 Query: 209 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 268 ||||||||||||||||| ||| |||| |||||||||| | |||| ||||| ||||||| Sbjct: 1032 taaggcccctaaatgactgctaagtggcaaaggaggtgagagtgcttagacaaccaggag 1091 Query: 269 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 328 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 1092 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctct 1151 Query: 329 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 371 ||||| || ||||||||| |||||| ||||||||||||||| Sbjct: 1152 tgcgcctaaaatgaacgggactaagcagtctgccgaagctgtg 1194 Score = 153 bits (77), Expect = 7e-34 Identities = 86/89 (96%) Strand = Plus / Plus Query: 439 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 498 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1282 gacgacgcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 1341 Query: 499 cccgaaaacccaaggtttcctccgcaagg 527 |||||||||| |||||||||||||||||| Sbjct: 1342 cccgaaaacctaaggtttcctccgcaagg 1370 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 44 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 103 ||||||||||||||||||||||||||||||||| | | |||||||||||| |||||| Sbjct: 884 tctaggggtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaac 943 Query: 104 tctgaatactaga 116 || |||||||||| Sbjct: 944 tcagaatactaga 956 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagc 30 |||||||||||||||||||||| Sbjct: 846 ccgaaatgcgttgaggcgcagc 867
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 244 bits (123), Expect = 2e-61 Identities = 198/223 (88%) Strand = Plus / Plus Query: 149 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 208 |||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||| Sbjct: 2741 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcaccagt 2800 Query: 209 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 268 ||||||||||||||||| ||| |||| |||||||||| | |||| ||||| ||||||| Sbjct: 2801 taaggcccctaaatgactgctaagtggcaaaggaggtgagagtgcttagacaaccaggag 2860 Query: 269 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 328 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 2861 gtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgctct 2920 Query: 329 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 371 ||||| || ||||||||| |||||| ||||||||||||||| Sbjct: 2921 tgcgcctaaaatgaacgggactaagcagtctgccgaagctgtg 2963 Score = 153 bits (77), Expect = 7e-34 Identities = 86/89 (96%) Strand = Plus / Plus Query: 439 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 498 ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3051 gacgacgcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 3110 Query: 499 cccgaaaacccaaggtttcctccgcaagg 527 |||||||||| |||||||||||||||||| Sbjct: 3111 cccgaaaacctaaggtttcctccgcaagg 3139 Score = 81.8 bits (41), Expect = 2e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 44 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 103 ||||||||||||||||||||||||||||||||| | | |||||||||||| |||||| Sbjct: 2653 tctaggggtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaac 2712 Query: 104 tctgaatactaga 116 || |||||||||| Sbjct: 2713 tcagaatactaga 2725 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagc 30 |||||||||||||||||||||| Sbjct: 2615 ccgaaatgcgttgaggcgcagc 2636
>gb|AY333417.1| Microcystis sp. 'Brown' 16S ribosomal RNA gene, partial sequence; tRNA-Ile gene and 16S-23S ribosomal RNA intergenic spacer, complete sequences; and 23S ribosomal RNA gene, partial sequence Length = 3321 Score = 238 bits (120), Expect = 2e-59 Identities = 198/224 (88%) Strand = Plus / Plus Query: 149 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 208 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 2482 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 2541 Query: 209 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 268 ||||| ||| |||||| || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 2542 taaggtccccaaatgataactaagtgagaaaggaggtgggagtgcattgacaaccaggag 2601 Query: 269 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 328 ||||||||||||||||| |||||| ||||||||||||||||||||||| || ||||| | Sbjct: 2602 gtttgcctagaagcagcaacccttaaaagagtgcgtaatagctcactggtcaagcgctcc 2661 Query: 329 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 372 ||||| ||| ||||||||||||||| |||| |||||||||||| Sbjct: 2662 tgcgccgaaaatgaacggggctaagttatctaccgaagctgtgg 2705 Score = 79.8 bits (40), Expect = 8e-12 Identities = 70/80 (87%) Strand = Plus / Plus Query: 448 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 507 |||| |||||||||||||| |||| |||||| | ||||||||||| | |||||||| | Sbjct: 2778 gaagtgagaatgtcggcttaagtagcgaaaatgtgggtgagaatcccacaccccgaaacc 2837 Query: 508 ccaaggtttcctccgcaagg 527 |||||||||||||||||||| Sbjct: 2838 ccaaggtttcctccgcaagg 2857 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 48 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 107 ||||||||||||||||||| |||||||| | || ||||||||| |||||||||||||| Sbjct: 2403 ggggtaaagcactgtttcgccgcgggctgggagaccggtaccaaggcgaggcaaactctg 2462 Query: 108 aatac 112 ||||| Sbjct: 2463 aatac 2467
>gb|AY584510.1| Anabaena sp. strain PCC 9109 23S ribosomal RNA gene, partial sequence Length = 2385 Score = 238 bits (120), Expect = 2e-59 Identities = 201/228 (88%) Strand = Plus / Plus Query: 148 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 207 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 208 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 267 |||||| ||| |||| | | || |||||||||||||||| | |||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcactaagtgataaaggaggtgagattgcatagacaactagga 685 Query: 268 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 327 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcggtc 745 Query: 328 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 375 |||||| ||| ||||||||||||||| ||| | ||||||||||||||| Sbjct: 746 ttgcgccgaaaatgaacggggctaagtgatgtaccgaagctgtgggat 793 Score = 103 bits (52), Expect = 6e-19 Identities = 73/80 (91%) Strand = Plus / Plus Query: 439 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 498 |||||| |||||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 859 gacgaaacggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 918 Query: 499 cccgaaaacccaaggtttcc 518 ||||||| || |||| |||| Sbjct: 919 cccgaaaccctaagggttcc 938 Score = 93.7 bits (47), Expect = 6e-16 Identities = 62/67 (92%) Strand = Plus / Plus Query: 47 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 106 |||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| Sbjct: 486 aggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactca 545 Query: 107 gaatact 113 ||||||| Sbjct: 546 gaatact 552
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 238 bits (120), Expect = 2e-59 Identities = 201/228 (88%) Strand = Plus / Plus Query: 148 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 207 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 944 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactag 1003 Query: 208 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 267 |||||||||| |||||| || | ||||| |||||||||| | |||| | ||| |||||| Sbjct: 1004 ctaaggccccaaaatgatcgttaagtgacaaaggaggtgagaatgcagaaacaaccagga 1063 Query: 268 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 327 ||||||| |||||||||||| |||||||||||||||||||||||||||| | ||||| | Sbjct: 1064 ggtttgcttagaagcagccatcctttaaagagtgcgtaatagctcactggtggagcgttc 1123 Query: 328 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 375 |||||| ||| ||| |||| |||| ||||||||||||||||||||| Sbjct: 1124 ttgcgccgaaaatgtccgggactaaatgatctgccgaagctgtgggat 1171 Score = 133 bits (67), Expect = 6e-28 Identities = 79/83 (95%) Strand = Plus / Plus Query: 439 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 498 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1238 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1297 Query: 499 cccgaaaacccaaggtttcctcc 521 |||||||||| |||| ||||||| Sbjct: 1298 cccgaaaacctaaggattcctcc 1320 Score = 121 bits (61), Expect = 2e-24 Identities = 70/73 (95%) Strand = Plus / Plus Query: 46 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 105 ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 859 taggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactc 918 Query: 106 tgaatactagata 118 ||||||||||||| Sbjct: 919 tgaatactagata 931
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 238 bits (120), Expect = 2e-59 Identities = 201/228 (88%) Strand = Plus / Plus Query: 148 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 207 |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 25753 gccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcactag 25812 Query: 208 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 267 |||||||||| |||||| || | ||||| |||||||||| | |||| | ||| |||||| Sbjct: 25813 ctaaggccccaaaatgatcgttaagtgacaaaggaggtgagaatgcagaaacaaccagga 25872 Query: 268 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 327 ||||||| |||||||||||| |||||||||||||||||||||||||||| | ||||| | Sbjct: 25873 ggtttgcttagaagcagccatcctttaaagagtgcgtaatagctcactggtggagcgttc 25932 Query: 328 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 375 |||||| ||| ||| |||| |||| ||||||||||||||||||||| Sbjct: 25933 ttgcgccgaaaatgtccgggactaaatgatctgccgaagctgtgggat 25980 Score = 133 bits (67), Expect = 6e-28 Identities = 79/83 (95%) Strand = Plus / Plus Query: 439 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 498 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 26047 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 26106 Query: 499 cccgaaaacccaaggtttcctcc 521 |||||||||| |||| ||||||| Sbjct: 26107 cccgaaaacctaaggattcctcc 26129 Score = 121 bits (61), Expect = 2e-24 Identities = 70/73 (95%) Strand = Plus / Plus Query: 46 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 105 ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| Sbjct: 25668 taggggtaaagcactgtttcggtgcgggctgcgaaagcggtaccaaatcgtggcaaactc 25727 Query: 106 tgaatactagata 118 ||||||||||||| Sbjct: 25728 tgaatactagata 25740
>gb|AY584526.1| Leptolyngbya boryana PCC 6306 23S ribosomal RNA gene, partial sequence Length = 2444 Score = 234 bits (118), Expect = 2e-58 Identities = 184/206 (89%) Strand = Plus / Plus Query: 148 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 207 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 208 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 267 |||||| ||| |||| || ||||||||||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtccccaaataacacctcagtgataaaggaggtgggaatgcagagacaaccagga 685 Query: 268 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 327 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgttc 745 Query: 328 ttgcgctgaagatgaacggggctaag 353 ||||| ||| ||||||||||||||| Sbjct: 746 ctgcgccgaaaatgaacggggctaag 771 Score = 105 bits (53), Expect = 1e-19 Identities = 80/89 (89%) Strand = Plus / Plus Query: 439 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 498 |||||||| |||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 860 gacgaagcagaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 919 Query: 499 cccgaaaacccaaggtttcctccgcaagg 527 || |||| || |||| |||||||| |||| Sbjct: 920 cctgaaatcctaagggttcctccggaagg 948 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Plus Query: 48 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 107 |||||||||||||| |||||||||||||| | || ||||||||||||||| ||||||||| Sbjct: 487 ggggtaaagcactgattcggtgcgggctgggagaccggtaccaaatcgagtcaaactctg 546 Query: 108 aatactagat 117 ||||| |||| Sbjct: 547 aataccagat 556
>gb|AY584511.1| Tolypothrix sp. PCC 7601 23S ribosomal RNA gene, partial sequence Length = 2383 Score = 232 bits (117), Expect = 9e-58 Identities = 227/262 (86%), Gaps = 5/262 (1%) Strand = Plus / Plus Query: 148 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 207 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 208 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 267 |||||| ||| |||| | |||| ||||| |||||||||| | ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgagaaaggaggtgagagtgcatagacaactagga 685 Query: 268 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 327 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgctc 745 Query: 328 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt----caaaat 383 || ||| ||| ||||||||||||||||||| | ||||||||||||||| | ||||| Sbjct: 746 tt-cgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggatttgttgaaaaat 804 Query: 384 gcatcggtaggggagcgttccg 405 |||||||||||||||||||| Sbjct: 805 aaatcggtaggggagcgttccg 826 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 48 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 107 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 546 Query: 108 aatac 112 ||||| Sbjct: 547 aatac 551 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 439 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 498 |||||| |||||| ||||||||||||||||||| || ||| || ||||||||| || | Sbjct: 861 gacgaaacggaagtgagaatgtcggcttgagtagcgcaaatatgtgtgagaatcacatac 920 Query: 499 cccgaaaacccaaggtttcc 518 ||||||| || |||| |||| Sbjct: 921 cccgaaaccctaagggttcc 940
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 232 bits (117), Expect = 9e-58 Identities = 312/373 (83%), Gaps = 3/373 (0%) Strand = Plus / Plus Query: 149 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagccc-ggatcaccag 207 ||||||||||| || |||||||||||||| ||||| ||||||||||||| ||| |||| | Sbjct: 953 ccagtgagacggtgagggataagcttcattgtcgaaagggaaacagcccaggaccaccgg 1012 Query: 208 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 267 ||||||||||| ||||| || ||||| ||||| ||| | ||||| ||||| |||| | Sbjct: 1013 ctaaggcccctcaatgattcctaagtgacgaaggatgtgagagtgcagagacaaccagaa 1072 Query: 268 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 327 ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| | Sbjct: 1073 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactgatcaagcgctc 1132 Query: 328 ttgcgctgaagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgca 386 | |||| ||| ||||| ||| || ||| |||||||||||| |||| |||| ||| | || Sbjct: 1133 tggcgccgaaaatgaaagggactcaaggaatctgccgaagccgtggcatgt-aaattaca 1191 Query: 387 tcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagc 446 | ||||||||||||||| | |||| ||||| |||||||| | || ||| || | Sbjct: 1192 tgggtaggggagcgttctgttttagttagaagcgtaagcgaaagcatgtgtggacaaaac 1251 Query: 447 ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 506 |||| |||||||||||||||||||||| |||| | ||||||||||| |||||||||||| Sbjct: 1252 agaagtgagaatgtcggcttgagtaacgcaaacgtgggtgagaatcccatgccccgaaaa 1311 Query: 507 cccaaggtttcct 519 || |||| ||||| Sbjct: 1312 cctaagggttcct 1324 Score = 129 bits (65), Expect = 1e-26 Identities = 71/73 (97%) Strand = Plus / Plus Query: 43 atctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaa 102 |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| Sbjct: 863 atctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaa 922 Query: 103 ctctgaatactag 115 ||||||||||||| Sbjct: 923 ctctgaatactag 935
>gb|AY584523.1| Microcystis sp. strain PCC 7820 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 230 bits (116), Expect = 4e-57 Identities = 198/224 (88%), Gaps = 1/224 (0%) Strand = Plus / Plus Query: 149 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 208 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 566 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 625 Query: 209 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 268 ||||| ||| |||||| || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 626 taaggtccccaaatgataactaagtgagaaaggaggtgggagtgcattgacaaccaggag 685 Query: 269 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 328 |||||||||||||||||||||||| ||||||||||||||||||||||| || ||||| | Sbjct: 686 gtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactggtcaagcgctcc 745 Query: 329 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 372 | ||| ||| ||||||||||||||| |||| |||||||||||| Sbjct: 746 t-cgccgaaaatgaacggggctaagttatctaccgaagctgtgg 788 Score = 79.8 bits (40), Expect = 8e-12 Identities = 70/80 (87%) Strand = Plus / Plus Query: 448 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 507 |||| |||||||||||||| |||| |||||| | ||||||||||| | |||||||| | Sbjct: 861 gaagtgagaatgtcggcttaagtagcgaaaatgtgggtgagaatcccacaccccgaaacc 920 Query: 508 ccaaggtttcctccgcaagg 527 |||||||||||||||||||| Sbjct: 921 ccaaggtttcctccgcaagg 940 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 48 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 107 ||||||||||||||||||| |||||||| | || ||||||||| |||||||||||||| Sbjct: 487 ggggtaaagcactgtttcgccgcgggctgggagaccggtaccaaggcgaggcaaactctg 546 Query: 108 aatac 112 ||||| Sbjct: 547 aatac 551
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 230 bits (116), Expect = 4e-57 Identities = 201/228 (88%), Gaps = 1/228 (0%) Strand = Plus / Plus Query: 148 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 207 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 208 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 267 |||||| ||| |||| | |||| |||||||||||||||| | ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagagtgcacagacaactagga 685 Query: 268 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 327 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgctc 745 Query: 328 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 375 | ||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 792 Score = 121 bits (61), Expect = 2e-24 Identities = 79/85 (92%) Strand = Plus / Plus Query: 439 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 498 |||||| |||||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 859 gacgaaacggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 918 Query: 499 cccgaaaacccaaggtttcctccgc 523 ||||||| || |||||||||||||| Sbjct: 919 cccgaaaccctaaggtttcctccgc 943 Score = 97.6 bits (49), Expect = 4e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 48 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 107 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||||| Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactctg 546 Query: 108 aatac 112 ||||| Sbjct: 547 aatac 551 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 atcggtaggggagcgttccg 405 |||||||||||||||||||| Sbjct: 805 atcggtaggggagcgttccg 824
>gb|AY584512.1| Anabaena variabilis strain ATCC 29413 23S ribosomal RNA gene, partial sequence Length = 2390 Score = 230 bits (116), Expect = 4e-57 Identities = 201/228 (88%), Gaps = 1/228 (0%) Strand = Plus / Plus Query: 148 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 207 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 208 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 267 |||||| ||| |||| | |||| |||||||||||||||| | ||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcatcgctaagtgataaaggaggtgagattgcctagacaactagga 685 Query: 268 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 327 ||||||||||||||||||||||||| |||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccacccttgaaagagtgcgtaatagctcactagtcaagcgatc 745 Query: 328 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 375 || ||| ||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 746 tt-cgccgaaaatgaacggggctaagcgatgtaccgaagctgtgggat 792 Score = 97.6 bits (49), Expect = 4e-17 Identities = 67/73 (91%) Strand = Plus / Plus Query: 446 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 505 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||| Sbjct: 867 cggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgccccgaaa 926 Query: 506 acccaaggtttcc 518 || |||| |||| Sbjct: 927 ccctaagggttcc 939 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 48 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 107 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 546 Query: 108 aatac 112 ||||| Sbjct: 547 aatac 551
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 228 bits (115), Expect = 1e-56 Identities = 196/223 (87%) Strand = Plus / Minus Query: 150 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 209 |||||||||| ||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 2050904 cagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccaact 2050845 Query: 210 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 269 |||||||| || | ||||||||||| |||||||||||||||| ||||| |||||||| Sbjct: 2050844 aaggcccccaagccatcgctcagtgattaaggaggtgggggtgcccagacaaccaggagg 2050785 Query: 270 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 329 || || ||||||||||||||||||||| ||||||||| |||| |||| || ||||||||| Sbjct: 2050784 ttggcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcgccctt 2050725 Query: 330 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 372 |||| ||| ||| ||||||||||||||| ||||||| ||||| Sbjct: 2050724 gcgccgaaaatggacggggctaagcgatgcgccgaagttgtgg 2050682 Score = 228 bits (115), Expect = 1e-56 Identities = 196/223 (87%) Strand = Plus / Plus Query: 150 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 209 |||||||||| ||||||||||||| ||||||||||||||||||||||| || ||||| || Sbjct: 1450597 cagtgagacggtgggggataagctccatcgtcgagagggaaacagcccagaccaccaact 1450656 Query: 210 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 269 |||||||| || | ||||||||||| |||||||||||||||| ||||| |||||||| Sbjct: 1450657 aaggcccccaagccatcgctcagtgattaaggaggtgggggtgcccagacaaccaggagg 1450716 Query: 270 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 329 || || ||||||||||||||||||||| ||||||||| |||| |||| || ||||||||| Sbjct: 1450717 ttggcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcgccctt 1450776 Query: 330 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 372 |||| ||| ||| ||||||||||||||| ||||||| ||||| Sbjct: 1450777 gcgccgaaaatggacggggctaagcgatgcgccgaagttgtgg 1450819 Score = 117 bits (59), Expect = 4e-23 Identities = 119/139 (85%) Strand = Plus / Minus Query: 389 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 448 |||||||||||||||||| ||| | ||||| | |||||||| | || ||||| |||| Sbjct: 2050673 ggtaggggagcgttccgcagtagggtgaagcgtcagcgaaagcagacgtggacgaggcgg 2050614 Query: 449 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 508 ||| |||||||| |||||||||| || | ||||||||||||||||||||||||||||||| Sbjct: 2050613 aagtgagaatgttggcttgagtagcgcagacattggtgagaatccaatgccccgaaaacc 2050554 Query: 509 caaggtttcctccgcaagg 527 ||||| |||| ||| |||| Sbjct: 2050553 caagggttcccccggaagg 2050535 Score = 117 bits (59), Expect = 4e-23 Identities = 119/139 (85%) Strand = Plus / Plus Query: 389 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 448 |||||||||||||||||| ||| | ||||| | ||| |||| | || ||||| |||| Sbjct: 1450828 ggtaggggagcgttccgcagtagggtgaagcgtcagcggaagcagacgtggacgaggcgg 1450887 Query: 449 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 508 ||| |||||||| |||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 1450888 aagtgagaatgttggcttgagtagcgcaaacattggtgagaatccaatgccccgaaaacc 1450947 Query: 509 caaggtttcctccgcaagg 527 ||||| |||| ||| |||| Sbjct: 1450948 caagggttcccccggaagg 1450966 Score = 50.1 bits (25), Expect = 0.007 Identities = 75/89 (84%), Gaps = 2/89 (2%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagcagttgactgg-acatctaggggtaaagcactgtttcgg 67 |||||||||||||||||||||| || ||| || || | |||||| ||||||| |||| Sbjct: 2051023 ccgaaatgcgttgaggcgcagc-gtcgacgggtacctggtggggtagagcactgaatcgg 2050965 Query: 68 tgcgggctgcgcgagcggtaccaaatcga 96 ||||||| ||| |||| |||||||||||| Sbjct: 2050964 tgcgggcggcgagagctgtaccaaatcga 2050936 Score = 50.1 bits (25), Expect = 0.007 Identities = 75/89 (84%), Gaps = 2/89 (2%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactgg-acatctaggggtaaagcactgtttcgg 67 |||||||||||||||||||||| || ||| || || | |||||| ||||||| |||| Sbjct: 1450478 ccgaaatgcgttgaggcgcagc-gtcgacgggtacctggtggggtagagcactgaatcgg 1450536 Query: 68 tgcgggctgcgcgagcggtaccaaatcga 96 ||||||| ||| |||| |||||||||||| Sbjct: 1450537 tgcgggcggcgagagctgtaccaaatcga 1450565
>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome Length = 151933 Score = 228 bits (115), Expect = 1e-56 Identities = 199/227 (87%) Strand = Plus / Plus Query: 149 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 208 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 137442 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 137501 Query: 209 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 268 ||||||||||||||| | ||| |||| |||||| ||| | |||| ||||| |||| || Sbjct: 137502 taaggcccctaaatggcagctaagtggcaaaggatgtgagaatgcagagacaaccagaag 137561 Query: 269 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 328 |||||| |||||||||||| |||| ||||||||||||||||||||||| | ||||| || Sbjct: 137562 gtttgcttagaagcagccatccttaaaagagtgcgtaatagctcactggtagagcgttct 137621 Query: 329 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 375 ||||| ||| ||||||||| |||||| |||||||||||||||||| Sbjct: 137622 tgcgccgaaaatgaacgggactaagctgcctgccgaagctgtgggat 137668 Score = 228 bits (115), Expect = 1e-56 Identities = 199/227 (87%) Strand = Plus / Minus Query: 149 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 208 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 48102 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 48043 Query: 209 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 268 ||||||||||||||| | ||| |||| |||||| ||| | |||| ||||| |||| || Sbjct: 48042 taaggcccctaaatggcagctaagtggcaaaggatgtgagaatgcagagacaaccagaag 47983 Query: 269 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 328 |||||| |||||||||||| |||| ||||||||||||||||||||||| | ||||| || Sbjct: 47982 gtttgcttagaagcagccatccttaaaagagtgcgtaatagctcactggtagagcgttct 47923 Query: 329 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 375 ||||| ||| ||||||||| |||||| |||||||||||||||||| Sbjct: 47922 tgcgccgaaaatgaacgggactaagctgcctgccgaagctgtgggat 47876 Score = 121 bits (61), Expect = 2e-24 Identities = 82/89 (92%) Strand = Plus / Plus Query: 439 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 498 ||||||||||||| ||||||||| ||||||||| || ||||||||||||||||||||||| Sbjct: 137740 gacgaagcggaagtgagaatgtcagcttgagtagcgcaaacattggtgagaatccaatgc 137799 Query: 499 cccgaaaacccaaggtttcctccgcaagg 527 |||||||||| |||| ||||||| ||||| Sbjct: 137800 cccgaaaacctaagggttcctccacaagg 137828 Score = 121 bits (61), Expect = 2e-24 Identities = 82/89 (92%) Strand = Plus / Minus Query: 439 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 498 ||||||||||||| ||||||||| ||||||||| || ||||||||||||||||||||||| Sbjct: 47804 gacgaagcggaagtgagaatgtcagcttgagtagcgcaaacattggtgagaatccaatgc 47745 Query: 499 cccgaaaacccaaggtttcctccgcaagg 527 |||||||||| |||| ||||||| ||||| Sbjct: 47744 cccgaaaacctaagggttcctccacaagg 47716 Score = 79.8 bits (40), Expect = 8e-12 Identities = 64/72 (88%) Strand = Plus / Plus Query: 44 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 103 ||||||||||||||||||||||||||||||||| | | |||||||||||| |||||| Sbjct: 137354 tctaggggtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaac 137413 Query: 104 tctgaatactag 115 || ||||||||| Sbjct: 137414 tcagaatactag 137425 Score = 79.8 bits (40), Expect = 8e-12 Identities = 64/72 (88%) Strand = Plus / Minus Query: 44 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 103 ||||||||||||||||||||||||||||||||| | | |||||||||||| |||||| Sbjct: 48190 tctaggggtaaagcactgtttcggtgcgggctgggaaactggtaccaaatcgtagcaaac 48131 Query: 104 tctgaatactag 115 || ||||||||| Sbjct: 48130 tcagaatactag 48119
>gb|AY584522.1| Lyngbya aestuarii PCC 7419 23S ribosomal RNA gene, partial sequence Length = 2435 Score = 224 bits (113), Expect = 2e-55 Identities = 183/205 (89%), Gaps = 1/205 (0%) Strand = Plus / Plus Query: 149 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 208 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 568 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 627 Query: 209 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 268 ||||| ||| |||| ||| || ||||| |||||||||||| ||||| ||||| ||||||| Sbjct: 628 taaggtccccaaataaccactaagtgagaaaggaggtgggagtgcacagacaaccaggag 687 Query: 269 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 328 ||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| | Sbjct: 688 gtttgcctagaagcagccatccttgaaagagtgcgtaatagctcactggtcaagcgctcc 747 Query: 329 tgcgctgaagatgaacggggctaag 353 | ||| ||| ||||||||||||||| Sbjct: 748 t-cgccgaaaatgaacggggctaag 771 Score = 113 bits (57), Expect = 6e-22 Identities = 63/65 (96%) Strand = Plus / Plus Query: 48 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 107 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 488 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactctg 547 Query: 108 aatac 112 ||||| Sbjct: 548 aatac 552 Score = 79.8 bits (40), Expect = 8e-12 Identities = 73/84 (86%) Strand = Plus / Plus Query: 439 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 498 ||||||||||||| ||||||||||||||||||| |||||| | ||||||||||| | | Sbjct: 857 gacgaagcggaagtgagaatgtcggcttgagtagcgaaaatttaggtgagaatcctaaac 916 Query: 499 cccgaaaacccaaggtttcctccg 522 ||||||| || |||| |||||||| Sbjct: 917 cccgaaaccctaagggttcctccg 940 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagc 30 |||||||||||||||||||||| Sbjct: 448 ccgaaatgcgttgaggcgcagc 469
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 224 bits (113), Expect = 2e-55 Identities = 197/225 (87%) Strand = Plus / Plus Query: 149 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 208 |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 1023 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcatcagc 1082 Query: 209 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 268 |||||||||| |||| ||||| |||| |||||||||| | ||| | ||| ||||||| Sbjct: 1083 taaggcccctgaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccaggag 1142 Query: 269 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 328 |||||| ||||||||||||||||||||||||||||||||||||||||| | |||| || Sbjct: 1143 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtaaagcgttct 1202 Query: 329 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtggg 373 ||||| ||| ||||||||| ||||||| |||||||||||||||| Sbjct: 1203 tgcgccgaaaatgaacgggactaagcggcctgccgaagctgtggg 1247 Score = 133 bits (67), Expect = 6e-28 Identities = 79/83 (95%) Strand = Plus / Plus Query: 439 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 498 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1432 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1491 Query: 499 cccgaaaacccaaggtttcctcc 521 |||||||||| |||| ||||||| Sbjct: 1492 cccgaaaacctaagggttcctcc 1514 Score = 103 bits (52), Expect = 6e-19 Identities = 67/72 (93%) Strand = Plus / Plus Query: 44 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 103 ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| Sbjct: 934 tctaggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgtagcaaac 993 Query: 104 tctgaatactag 115 | ||||||||| Sbjct: 994 taagaatactag 1005
>gb|AY336134.1| Microcystis sp. MGccsy2 16S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, complete sequence; tRNA-Ile gene, complete sequence; and 23S ribosomal RNA gene, partial sequence Length = 3320 Score = 222 bits (112), Expect = 9e-55 Identities = 196/224 (87%) Strand = Plus / Plus Query: 149 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 208 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct: 2481 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccagc 2540 Query: 209 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 268 ||||| ||| |||||| || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 2541 taaggtccccaaatgataactaagtgagaaaggaggtgggagtgcattgacaaccaggag 2600 Query: 269 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 328 ||||||||||| ||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 2601 gtttgcctagaggcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcc 2660 Query: 329 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 372 ||||| ||| ||||||||||||||| |||| |||||||||||| Sbjct: 2661 tgcgccgaaaatgaacggggctaagttatctaccgaagctgtgg 2704 Score = 79.8 bits (40), Expect = 8e-12 Identities = 70/80 (87%) Strand = Plus / Plus Query: 448 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 507 |||| |||||||||||||| |||| |||||| | ||||||||||| | |||||||| | Sbjct: 2777 gaagtgagaatgtcggcttaagtagcgaaaatgtgggtgagaatcccacaccccgaaacc 2836 Query: 508 ccaaggtttcctccgcaagg 527 |||||||||||||||||||| Sbjct: 2837 ccaaggtttcctccgcaagg 2856 Score = 65.9 bits (33), Expect = 1e-07 Identities = 57/65 (87%) Strand = Plus / Plus Query: 48 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 107 ||||||||||||||||||| |||||||| | || |||||||| |||||||||||||| Sbjct: 2402 ggggtaaagcactgtttcgccgcgggctgggagaccggtaccagggcgaggcaaactctg 2461 Query: 108 aatac 112 ||||| Sbjct: 2462 aatac 2466
>gb|AY584513.1| Nodularia harveyana strain CCAP 1452/1 23S ribosomal RNA gene, partial sequence Length = 2387 Score = 222 bits (112), Expect = 9e-55 Identities = 200/228 (87%), Gaps = 1/228 (0%) Strand = Plus / Plus Query: 148 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 207 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 208 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 267 |||||| ||| |||| | ||| |||||||||||||||||| ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcattgctaagtgataaaggaggtgggagtgcagagacaactagga 685 Query: 268 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 327 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 686 ggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactagtcaagcgctc 745 Query: 328 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 375 | ||| ||| |||||||||||||||| || | ||||||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaagcaatgtaccgaagctgtgggat 792 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 48 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 107 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactcag 546 Query: 108 aatac 112 ||||| Sbjct: 547 aatac 551 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 446 cggaagcgagaatgtcggcttgagta 471 |||||| ||||||||||||||||||| Sbjct: 868 cggaagtgagaatgtcggcttgagta 893
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 222 bits (112), Expect = 9e-55 Identities = 196/224 (87%) Strand = Plus / Plus Query: 149 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 208 ||||| ||||| ||||||||||||||||||||||| ||||||||||||| || ||||||| Sbjct: 3327965 ccagtaagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccagc 3328024 Query: 209 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 268 ||||| ||| |||| | | || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 3328025 taaggtccccaaatcatcactaagtgagaaaggaggtgggagtgcattgacaaccaggag 3328084 Query: 269 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 328 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 3328085 gtttgcctagaagcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcc 3328144 Query: 329 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 372 ||||| ||| ||||||||||||||| ||| | |||||||||||| Sbjct: 3328145 tgcgccgaaaatgaacggggctaagtgatgtaccgaagctgtgg 3328188 Score = 222 bits (112), Expect = 9e-55 Identities = 196/224 (87%) Strand = Plus / Minus Query: 149 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 208 ||||| ||||| ||||||||||||||||||||||| ||||||||||||| || ||||||| Sbjct: 2450763 ccagtaagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccagc 2450704 Query: 209 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 268 ||||| ||| |||| | | || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 2450703 taaggtccccaaatcatcactaagtgagaaaggaggtgggagtgcattgacaaccaggag 2450644 Query: 269 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 328 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 2450643 gtttgcctagaagcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcc 2450584 Query: 329 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 372 ||||| ||| ||||||||||||||| ||| | |||||||||||| Sbjct: 2450583 tgcgccgaaaatgaacggggctaagtgatgtaccgaagctgtgg 2450540 Score = 79.8 bits (40), Expect = 8e-12 Identities = 70/80 (87%) Strand = Plus / Plus Query: 448 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 507 |||| ||||||||||||||||||| |||||| || ||||||||||| || |||||||| | Sbjct: 3328262 gaagtgagaatgtcggcttgagtagcgaaaatatgggtgagaatcccataccccgaaatc 3328321 Query: 508 ccaaggtttcctccgcaagg 527 | |||| |||||||| |||| Sbjct: 3328322 ctaagggttcctccggaagg 3328341 Score = 79.8 bits (40), Expect = 8e-12 Identities = 70/80 (87%) Strand = Plus / Minus Query: 448 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 507 |||| ||||||||||||||||||| |||||| || ||||||||||| || |||||||| | Sbjct: 2450466 gaagtgagaatgtcggcttgagtagcgaaaatatgggtgagaatcccataccccgaaatc 2450407 Query: 508 ccaaggtttcctccgcaagg 527 | |||| |||||||| |||| Sbjct: 2450406 ctaagggttcctccggaagg 2450387 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 48 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 107 ||||||||||||||||||| ||||||| ||| |||| |||||||| ||||||||||| | Sbjct: 3327886 ggggtaaagcactgtttcgctgcgggcggcgagagctgtaccaaagtgaggcaaactcag 3327945 Query: 108 aatac 112 ||||| Sbjct: 3327946 aatac 3327950 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Minus Query: 48 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 107 ||||||||||||||||||| ||||||| ||| |||| |||||||| ||||||||||| | Sbjct: 2450842 ggggtaaagcactgtttcgctgcgggcggcgagagctgtaccaaagtgaggcaaactcag 2450783 Query: 108 aatac 112 ||||| Sbjct: 2450782 aatac 2450778
>emb|AM084276.1| Compsopogon coeruleus chloroplast 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 36.94 Length = 4420 Score = 222 bits (112), Expect = 9e-55 Identities = 308/371 (83%), Gaps = 3/371 (0%) Strand = Plus / Plus Query: 150 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 209 ||||||||| || |||||||||||||| ||| | ||||||||||||| || |||||| | Sbjct: 2640 cagtgagacagtgagggataagcttcattgtcaaaagggaaacagcccagaccaccagtt 2699 Query: 210 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 269 ||||||||||||| || |||| |||||||||||| |||| ||| |||||||| Sbjct: 2700 aaggcccctaaatagttactaagtggcaaaggaggtgggaatgcattaacaaccaggagg 2759 Query: 270 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 329 ||||| |||||||||| | |||||||||||||||||||||||||||| || || | | | Sbjct: 2760 tttgcttagaagcagcaatcctttaaagagtgcgtaatagctcactggtctagtgatcct 2819 Query: 330 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcg 389 |||| ||| ||||||||| ||||| | ||||||| ||||||||||| |||||||| Sbjct: 2820 gcgccgaaaatgaacgggactaagtaacttgccgaatctgtgggatgt--ttatgcatcg 2877 Query: 390 gtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgga 449 |||||||||||||| | |||||| |||||| |||||| || || ||| |||| || Sbjct: 2878 gtaggggagcgttctg-cttagattgaagcattaacgaaagtggatgtggacaaagcaga 2936 Query: 450 agcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccc 509 || ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| Sbjct: 2937 agtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccggaaacct 2996 Query: 510 aaggtttcctc 520 |||| |||||| Sbjct: 2997 aaggattcctc 3007 Score = 103 bits (52), Expect = 6e-19 Identities = 92/106 (86%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttgactggacatctaggggtaaagcactgtttcggt 68 |||||||||||||||||||||| ||||| | | ||||||||||||||||||||||| Sbjct: 2520 ccgaaatgcgttgaggcgcagcggttgaaattaaacttaggggtaaagcactgtttcggt 2579 Query: 69 gcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatacta 114 |||||||||| || ||||||||||||| ||||||| |||||||| Sbjct: 2580 gcgggctgcgaaagyggtaccaaatcgatgcaaactaagaatacta 2625
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 220 bits (111), Expect = 4e-54 Identities = 195/223 (87%) Strand = Plus / Plus Query: 150 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 209 |||||||||| ||||||||||||| |||||||||||||| |||||||| || ||||| || Sbjct: 2313248 cagtgagacggtgggggataagctccatcgtcgagaggggaacagcccagaccaccaact 2313307 Query: 210 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 269 |||||||| || | ||||||||| | |||||||||||||||| |||||| |||||||| Sbjct: 2313308 aaggcccccaagacatcgctcagtggttaaggaggtgggggtgcgaagacaaccaggagg 2313367 Query: 270 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 329 || || ||||||||||||||||||||| ||||||||| |||| |||| || ||||||||| Sbjct: 2313368 ttggcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcgccctt 2313427 Query: 330 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 372 |||| ||| ||||||||| ||||||||| ||||||| ||||| Sbjct: 2313428 gcgccgaaaatgaacgggactaagcgatgcgccgaagttgtgg 2313470 Score = 220 bits (111), Expect = 4e-54 Identities = 195/223 (87%) Strand = Plus / Minus Query: 150 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 209 |||||||||| ||||||||||||| |||||||||||||| |||||||| || ||||| || Sbjct: 1108599 cagtgagacggtgggggataagctccatcgtcgagaggggaacagcccagaccaccaact 1108540 Query: 210 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 269 |||||||| || | ||||||||| | |||||||||||||||| |||||| |||||||| Sbjct: 1108539 aaggcccccaagacatcgctcagtggttaaggaggtgggggtgcgaagacaaccaggagg 1108480 Query: 270 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 329 || || ||||||||||||||||||||| ||||||||| |||| |||| || ||||||||| Sbjct: 1108479 ttggcttagaagcagccaccctttaaacagtgcgtaacagctgactggtcaagcgccctt 1108420 Query: 330 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 372 |||| ||| ||||||||| ||||||||| ||||||| ||||| Sbjct: 1108419 gcgccgaaaatgaacgggactaagcgatgcgccgaagttgtgg 1108377 Score = 113 bits (57), Expect = 6e-22 Identities = 81/89 (91%) Strand = Plus / Plus Query: 439 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 498 ||||| ||||||| |||||||| |||||||||| || ||||||||||||||||||||||| Sbjct: 2313529 gacgaggcggaagtgagaatgttggcttgagtagcgcaaacattggtgagaatccaatgc 2313588 Query: 499 cccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||| |||| ||| |||| Sbjct: 2313589 cccgaaaacccaagggttcccccggaagg 2313617 Score = 113 bits (57), Expect = 6e-22 Identities = 81/89 (91%) Strand = Plus / Minus Query: 439 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 498 ||||| ||||||| |||||||| |||||||||| || ||||||||||||||||||||||| Sbjct: 1108318 gacgaggcggaagtgagaatgttggcttgagtagcgcaaacattggtgagaatccaatgc 1108259 Query: 499 cccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||| |||| ||| |||| Sbjct: 1108258 cccgaaaacccaagggttcccccggaagg 1108230 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagc 30 |||||||||||||||||||||| Sbjct: 2313129 ccgaaatgcgttgaggcgcagc 2313150 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Minus Query: 9 ccgaaatgcgttgaggcgcagc 30 |||||||||||||||||||||| Sbjct: 1108718 ccgaaatgcgttgaggcgcagc 1108697
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 220 bits (111), Expect = 4e-54 Identities = 198/227 (87%) Strand = Plus / Plus Query: 149 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 208 |||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||| |||| Sbjct: 933 ccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagatcatcagc 992 Query: 209 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 268 ||||||||| |||| ||||| |||| ||||||||||| | |||| | ||||||||||| Sbjct: 993 taaggccccagaatggccgctaagtggtaaaggaggtgagaatgcagaaacagccaggag 1052 Query: 269 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 328 |||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| || Sbjct: 1053 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtggagcgttct 1112 Query: 329 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 375 ||||| ||| || ||||| ||||||| ||||||||||| |||||| Sbjct: 1113 tgcgccgaaaattcacgggactaagcggcctgccgaagctatgggat 1159 Score = 125 bits (63), Expect = 2e-25 Identities = 75/79 (94%) Strand = Plus / Plus Query: 443 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 502 ||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1236 aagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 1295 Query: 503 aaaacccaaggtttcctcc 521 |||||| |||| ||||||| Sbjct: 1296 aaaacctaagggttcctcc 1314 Score = 87.7 bits (44), Expect = 3e-14 Identities = 94/110 (85%), Gaps = 3/110 (2%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttg---actggacatctaggggtaaagcactgtttc 65 |||||||||||||||||||||| |||| || || |||||||||||||||||||||| Sbjct: 806 ccgaaatgcgttgaggcgcagcggttggcgacgggctgtctaggggtaaagcactgtttc 865 Query: 66 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactag 115 |||||||||| || || |||||||||||| ||||||| ||||||||| Sbjct: 866 ggtgcgggctacgaaagtggtaccaaatcgtagcaaactaagaatactag 915 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 386 atcggtaggggagcgttccg 405 |||||||||||||||||||| Sbjct: 1179 atcggtaggggagcgttccg 1198
>gb|AY584520.1| Leptolyngbya sp. PCC 7410 23S ribosomal RNA gene, partial sequence Length = 2441 Score = 218 bits (110), Expect = 1e-53 Identities = 183/206 (88%), Gaps = 1/206 (0%) Strand = Plus / Plus Query: 148 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 207 |||||||||||| ||||||||||||||||||||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccaccag 625 Query: 208 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 267 |||||| ||| |||| || ||||||||||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtcccaaaataacacctcagtgataaaggaggtgggaatgcagagacaaccagga 685 Query: 268 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 327 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgttc 745 Query: 328 ttgcgctgaagatgaacggggctaag 353 | ||| ||| ||||||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaag 770 Score = 105 bits (53), Expect = 1e-19 Identities = 80/89 (89%) Strand = Plus / Plus Query: 439 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 498 |||||||| |||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 858 gacgaagcagaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 917 Query: 499 cccgaaaacccaaggtttcctccgcaagg 527 || |||| || |||| |||||||| |||| Sbjct: 918 cctgaaatcctaagggttcctccggaagg 946 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Plus Query: 48 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 107 |||||||||||||| |||||||||||||| | || ||||||||||||||| ||||||||| Sbjct: 487 ggggtaaagcactgattcggtgcgggctgggagaccggtaccaaatcgagtcaaactctg 546 Query: 108 aatactagat 117 ||||| |||| Sbjct: 547 aataccagat 556
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 216 bits (109), Expect = 6e-53 Identities = 196/225 (87%) Strand = Plus / Minus Query: 148 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 207 |||||| ||||| ||||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 2333871 gccagtcagacggtgggggataagcttcatcgtcgagagggaaacagcccagaccaccag 2333812 Query: 208 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 267 |||||| ||| |||| | | || |||| ||||||||||||| ||| ||||| |||||| Sbjct: 2333811 ctaaggtccccaaatcatcactaagtggcaaaggaggtggggatgctcagacaaccagga 2333752 Query: 268 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 327 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 2333751 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgttc 2333692 Query: 328 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 372 ||||| ||| ||||||||| ||||| ||| | |||||||||||| Sbjct: 2333691 ctgcgccgaaaatgaacgggactaagtgatgtaccgaagctgtgg 2333647 Score = 113 bits (57), Expect = 6e-22 Identities = 75/81 (92%) Strand = Plus / Minus Query: 439 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 498 |||||||| |||| ||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 2333581 gacgaagcagaagtgagaatgccggcttgagtagcgaaaacattggtgagaatccaatgc 2333522 Query: 499 cccgaaaacccaaggtttcct 519 ||||||| ||||||| ||||| Sbjct: 2333521 cccgaaaccccaagggttcct 2333501 Score = 105 bits (53), Expect = 1e-19 Identities = 62/65 (95%) Strand = Plus / Minus Query: 48 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 107 |||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||| Sbjct: 2333950 ggggtaaagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactctg 2333891 Query: 108 aatac 112 ||||| Sbjct: 2333890 aatac 2333886
>emb|AM084274.1| Glaucocystis nostochinearum cyanelle 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain SAG 45.88 Length = 3065 Score = 216 bits (109), Expect = 6e-53 Identities = 190/217 (87%) Strand = Plus / Plus Query: 161 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 220 ||||||||||||| ||| ||| ||||||||||||||| || |||||| ||||||||| || Sbjct: 1410 tgggggataagctccattgtcaagagggaaacagcccagaccaccagttaaggccccaaa 1469 Query: 221 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 280 || | ||| |||| ||||||||||||| |||| ||||| ||||||||||||||||||| Sbjct: 1470 ataatagctaagtggtaaaggaggtgggagtgcttagacaaccaggaggtttgcctagaa 1529 Query: 281 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 340 ||||| | |||||||||||||||||||||||||||| || ||||| ||||||| ||| || Sbjct: 1530 gcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgctcttgcgccgaaaat 1589 Query: 341 gaacggggctaagcgatctgccgaagctgtgggatgt 377 ||| ||| |||||| || ||||||||||||||||||| Sbjct: 1590 gaaagggactaagctatttgccgaagctgtgggatgt 1626 Score = 137 bits (69), Expect = 4e-29 Identities = 84/89 (94%) Strand = Plus / Plus Query: 439 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 498 |||||| |||||| ||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 1726 gacgaaacggaagtgagaatgtcggcttgagtagcgaaaacattggtgaaaatccaatgc 1785 Query: 499 cccgaaaacccaaggtttcctccgcaagg 527 ||||||||||||||| ||||||||||||| Sbjct: 1786 cccgaaaacccaagggttcctccgcaagg 1814 Score = 105 bits (53), Expect = 1e-19 Identities = 65/69 (94%) Strand = Plus / Plus Query: 46 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 105 ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 1316 taggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgatgcaaacta 1375 Query: 106 tgaatacta 114 |||||||| Sbjct: 1376 agaatacta 1384
>gb|AY584509.1| Anabaena cylindrica strain UTEX 629 23S ribosomal RNA gene, partial sequence Length = 2389 Score = 214 bits (108), Expect = 2e-52 Identities = 195/224 (87%) Strand = Plus / Plus Query: 148 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 207 ||||||||||| ||||||||||||||||| ||| ||||||||||||||| || |||||| Sbjct: 566 gccagtgagacagtgggggataagcttcattgtcaagagggaaacagcccagaccaccag 625 Query: 208 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 267 |||||| ||| |||| | |||| | |||||||||||||||| ||||| ||||| | |||| Sbjct: 626 ctaaggtccccaaatcagcgctaattgataaaggaggtgggagtgcatagacaactagga 685 Query: 268 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 327 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| | Sbjct: 686 ggtttgcctagaagcagccacccttaaaagagtgcgtaatagctcactagtcaagcgctc 745 Query: 328 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtg 371 ||||| ||| |||||||||||| ||| || | ||||| ||||| Sbjct: 746 ctgcgccgaatatgaacggggctgagccatgtaccgaaactgtg 789 Score = 97.6 bits (49), Expect = 4e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 48 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 107 ||||||||||||||||||||||||||||| | || ||||||||||||||| ||||||||| Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgggagaccggtaccaaatcgagacaaactctg 546 Query: 108 aatac 112 ||||| Sbjct: 547 aatac 551 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 439 gacgaagcggaagcgagaatgtcggcttgagta 471 |||||| |||||| ||||||||||||||||||| Sbjct: 861 gacgaaacggaagtgagaatgtcggcttgagta 893
>gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2632 Score = 214 bits (108), Expect = 2e-52 Identities = 192/220 (87%) Strand = Plus / Plus Query: 149 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 208 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || || |||| Sbjct: 957 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagc 1016 Query: 209 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 268 ||||||||||||||| ||||| |||| |||||||||| | ||| | ||| ||||||| Sbjct: 1017 taaggcccctaaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccaggag 1076 Query: 269 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 328 |||||| ||||||||||||||||||||||||||||||||||||||||| | |||| || Sbjct: 1077 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtaaagcgttct 1136 Query: 329 tgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||| ||| |||| |||| ||||||| ||||||||||| Sbjct: 1137 tgcgccgaaaatgatcgggactaagcggcctgccgaagct 1176 Score = 129 bits (65), Expect = 1e-26 Identities = 104/117 (88%) Strand = Plus / Plus Query: 389 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 448 ||||||||||||||||||| ||| |||||| | ||| |||| || || |||| |||| Sbjct: 1208 ggtaggggagcgttccgccaacgagtgaagcatcagcgtaagccggtgtggacggggcgg 1267 Query: 449 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 505 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1268 aagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 1324 Score = 97.6 bits (49), Expect = 4e-17 Identities = 96/111 (86%), Gaps = 3/111 (2%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagt---tgactggacatctaggggtaaagcactgtttc 65 |||||||||||||||||||||| || ||| || |||||||||||||| ||||||| Sbjct: 829 ccgaaatgcgttgaggcgcagcggtaaatgatgggctgtctaggggtaaagctctgtttc 888 Query: 66 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 116 ||||||||||||| ||||||||||||||| |||||||| |||||||||| Sbjct: 889 ggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaatactaga 939
>gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; chloroplast genes for chloroplast products Length = 5057 Score = 214 bits (108), Expect = 2e-52 Identities = 192/220 (87%) Strand = Plus / Plus Query: 149 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 208 ||||||||||| ||||||||||||||||||||| ||||||||||||||| || || |||| Sbjct: 2839 ccagtgagacggtgggggataagcttcatcgtcaagagggaaacagcccagaccatcagc 2898 Query: 209 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 268 ||||||||||||||| ||||| |||| |||||||||| | ||| | ||| ||||||| Sbjct: 2899 taaggcccctaaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccaggag 2958 Query: 269 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 328 |||||| ||||||||||||||||||||||||||||||||||||||||| | |||| || Sbjct: 2959 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggtaaagcgttct 3018 Query: 329 tgcgctgaagatgaacggggctaagcgatctgccgaagct 368 ||||| ||| |||| |||| ||||||| ||||||||||| Sbjct: 3019 tgcgccgaaaatgatcgggactaagcggcctgccgaagct 3058 Score = 129 bits (65), Expect = 1e-26 Identities = 104/117 (88%) Strand = Plus / Plus Query: 389 ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 448 ||||||||||||||||||| ||| |||||| | ||| |||| || || |||| |||| Sbjct: 3090 ggtaggggagcgttccgccaacgagtgaagcatcagcgtaagccggtgtggacggggcgg 3149 Query: 449 aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 505 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3150 aagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 3206 Score = 97.6 bits (49), Expect = 4e-17 Identities = 96/111 (86%), Gaps = 3/111 (2%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagt---tgactggacatctaggggtaaagcactgtttc 65 |||||||||||||||||||||| || ||| || |||||||||||||| ||||||| Sbjct: 2711 ccgaaatgcgttgaggcgcagcggtaaatgatgggctgtctaggggtaaagctctgtttc 2770 Query: 66 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatactaga 116 ||||||||||||| ||||||||||||||| |||||||| |||||||||| Sbjct: 2771 ggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaatactaga 2821
>gb|AY008341.1| Trichosarcina mucosa large subunit ribosomal RNA (rrnL) gene, partial sequence; and rrnL and putative site-specific DNA endonuclease (rrnL) genes, complete cds; chloroplast genes for chloroplast products Length = 4502 Score = 212 bits (107), Expect = 9e-52 Identities = 188/215 (87%) Strand = Plus / Plus Query: 161 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 220 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 999 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 1058 Query: 221 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 280 ||| ||||| |||| |||||||||| |||||||||| |||| |||||||| ||||| Sbjct: 1059 atggccgctaagtggcaaaggaggtgaaaatgcaaagacaaccagaaggtttgcttagaa 1118 Query: 281 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 340 |||||||||||| ||||||||||||||||||||||| | ||||| |||||| ||| || Sbjct: 1119 gcagccacccttaaaagagtgcgtaatagctcactggtagagcgtttttgcgccgaaaat 1178 Query: 341 gaacggggctaagcgatctgccgaagctgtgggat 375 ||||||| ||||||| |||||||||||||||||| Sbjct: 1179 gaacgggactaagcggcctgccgaagctgtgggat 1213 Score = 105 bits (53), Expect = 1e-19 Identities = 74/81 (91%) Strand = Plus / Plus Query: 439 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 498 ||||| || |||| |||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1281 gacgacgcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgg 1340 Query: 499 cccgaaaacccaaggtttcct 519 |||||||||| |||| ||||| Sbjct: 1341 cccgaaaacctaagggttcct 1361 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 46 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 105 ||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||| Sbjct: 901 taggggtaaagcactgtttcggtgcgggctgcgaaagcggtactaaatcgtcgcaaacta 960 Query: 106 tgaatacta 114 |||||||| Sbjct: 961 agaatacta 969
>gb|AY584521.1| Leptolyngbya sp. PCC 7104 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 208 bits (105), Expect = 1e-50 Identities = 196/225 (87%), Gaps = 1/225 (0%) Strand = Plus / Plus Query: 148 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 207 |||||| ||||| ||||||||||||||||||||||| ||||||||||||| || |||||| Sbjct: 566 gccagtcagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccag 625 Query: 208 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 267 |||||| ||| ||||| ||| |||||||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtccccaaatggatgctaagtgataaaggaggtgggattgcagagacaaccagga 685 Query: 268 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 327 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgatc 745 Query: 328 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 372 | ||| ||| |||||||||||||||| || |||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaagcatcctaccgaagctgtgg 789 Score = 97.6 bits (49), Expect = 4e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 48 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 107 |||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactcag 546 Query: 108 aatac 112 ||||| Sbjct: 547 aatac 551 Score = 63.9 bits (32), Expect = 5e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 448 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 507 |||| |||||||||||||| |||| |||||| | ||||||||||| | |||||||| | Sbjct: 866 gaagtgagaatgtcggcttaagtagcgaaaatgtaggtgagaatcctacaccccgaaatc 925 Query: 508 ccaaggtttcctccgcaagg 527 |||||| |||||||| |||| Sbjct: 926 ccaagggttcctccggaagg 945
>gb|AY584517.1| Gloeobacter violaceus strain PCC 7421 23S ribosomal RNA gene, partial sequence Length = 2340 Score = 208 bits (105), Expect = 1e-50 Identities = 180/205 (87%) Strand = Plus / Plus Query: 150 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 209 ||||||||| ||||||||||||| ||| ||||||||||||||||||| || |||||||| Sbjct: 567 cagtgagactgtgggggataagctccatggtcgagagggaaacagcccagaccaccagct 626 Query: 210 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 269 |||| ||| |||| |||||||||| ||||||||||| |||| ||||| |||||||| Sbjct: 627 aaggtccccaaattgtagctcagtgattaaggaggtgggattgcacagacaaccaggagg 686 Query: 270 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 329 ||||||||||||||||||||||| ||||||||||||||||||||||| || |||| | | Sbjct: 687 tttgcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgatcct 746 Query: 330 gcgctgaagatgaacggggctaagc 354 |||| ||| |||||||||||||||| Sbjct: 747 gcgccgaaaatgaacggggctaagc 771 Score = 105 bits (53), Expect = 1e-19 Identities = 80/89 (89%) Strand = Plus / Plus Query: 439 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 498 ||||| ||||||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 847 gacgaggcggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 906 Query: 499 cccgaaaacccaaggtttcctccgcaagg 527 |||||| || |||| |||||||| |||| Sbjct: 907 tccgaaaccctaagggttcctccggaagg 935 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 48 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 107 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 485 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagacaaactccg 544 Query: 108 aatac 112 ||||| Sbjct: 545 aatac 549
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 208 bits (105), Expect = 1e-50 Identities = 196/225 (87%), Gaps = 1/225 (0%) Strand = Plus / Plus Query: 148 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 207 |||||| ||||| || |||||||||| ||||||||||||||||||||||| || |||||| Sbjct: 566 gccagtaagacggtgagggataagctccatcgtcgagagggaaacagcccagaccaccag 625 Query: 208 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 267 |||||| ||| ||||| ||| |||||||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtcccaaaatggatgctaagtgataaaggaggtgggattgcagagacaaccagga 685 Query: 268 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 327 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgatc 745 Query: 328 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 372 | ||| ||| |||||||||||||||| ||| |||||||||||| Sbjct: 746 ct-cgccgaaaatgaacggggctaagcattctaccgaagctgtgg 789 Score = 105 bits (53), Expect = 1e-19 Identities = 62/65 (95%) Strand = Plus / Plus Query: 48 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 107 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgagacaaactcag 546 Query: 108 aatac 112 ||||| Sbjct: 547 aatac 551 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 439 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 498 ||||| || |||| ||||||||||||||||||| ||||||||| ||||||||| |||| Sbjct: 855 gacgaggcagaagtgagaatgtcggcttgagtagcgaaaacatgtgtgagaatcacatgc 914 Query: 499 cccgaaaacccaaggtttcctccgcaagg 527 ||||||| || |||| |||||||| |||| Sbjct: 915 cccgaaaccctaagggttcctccggaagg 943
>gb|AY584507.1| Euhalothece sp. BAA001 23S ribosomal RNA gene, partial sequence Length = 2441 Score = 206 bits (104), Expect = 5e-50 Identities = 195/224 (87%), Gaps = 1/224 (0%) Strand = Plus / Plus Query: 149 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 208 ||||| ||||| ||||||||||||||||||||||| ||||||||||||| || ||||||| Sbjct: 568 ccagtaagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccagc 627 Query: 209 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 268 ||||| ||| |||| | | || ||||| |||||||||||| ||||| |||| ||||||| Sbjct: 628 taaggtccccaaatcatcactaagtgagaaaggaggtgggagtgcattgacaaccaggag 687 Query: 269 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 328 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 688 gtttgcctagaagcagcaatccttaaaagagtgcgtaatagctcactggtcaagcgctcc 747 Query: 329 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 372 | ||| ||| ||||||||||||||| ||| | |||||||||||| Sbjct: 748 t-cgccgaaaatgaacggggctaagtgatgtaccgaagctgtgg 790 Score = 79.8 bits (40), Expect = 8e-12 Identities = 70/80 (87%) Strand = Plus / Plus Query: 448 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 507 |||| ||||||||||||||||||| |||||| || ||||||||||| || |||||||| | Sbjct: 864 gaagtgagaatgtcggcttgagtagcgaaaatatgggtgagaatcccataccccgaaatc 923 Query: 508 ccaaggtttcctccgcaagg 527 | |||| |||||||| |||| Sbjct: 924 ctaagggttcctccggaagg 943 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Plus Query: 48 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 107 ||||||||||||||||||| ||||||| ||| |||| |||||||| ||||||||||| | Sbjct: 489 ggggtaaagcactgtttcgctgcgggcggcgagagctgtaccaaagtgaggcaaactcag 548 Query: 108 aatac 112 ||||| Sbjct: 549 aatac 553
>gb|L44126.1|SFFCPRGOL Scherffelia dubia chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3334 Score = 206 bits (104), Expect = 5e-50 Identities = 152/168 (90%) Strand = Plus / Plus Query: 149 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 208 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 965 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 1024 Query: 209 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 268 |||||||||||||| || ||| |||| |||||||||| ||| ||||| ||||||| Sbjct: 1025 taaggcccctaaataacggctaagtgggaaaggaggtgaaaatgctcagacaaccaggag 1084 Query: 269 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 316 |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1085 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactg 1132 Score = 105 bits (53), Expect = 1e-19 Identities = 74/81 (91%) Strand = Plus / Plus Query: 439 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 498 ||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 1261 gacgaagcggaagtgagaatgtcggtttgagtaacgaaaacatcggtgagaatcctttgc 1320 Query: 499 cccgaaaacccaaggtttcct 519 |||||||||| |||| ||||| Sbjct: 1321 cccgaaaacctaagggttcct 1341 Score = 71.9 bits (36), Expect = 2e-09 Identities = 91/107 (85%), Gaps = 3/107 (2%) Strand = Plus / Plus Query: 10 cgaaatgcgttgaggcgcagcagttgac--tggacatcta-ggggtaaagcactgtttcg 66 ||||||||||||||||||||| |||| | ||| | | || ||||||||||||||||||| Sbjct: 840 cgaaatgcgttgaggcgcagcggttgtcgatgggcttttaaggggtaaagcactgtttcg 899 Query: 67 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 113 ||||||||| | ||||||||||||||| ||||||| ||||||| Sbjct: 900 atgcgggctgtgaaagcggtaccaaatcgttgcaaactaagaatact 946
>gb|AF393609.1| Scherffelia dubia small subunit ribosomal RNA (rrs) gene, complete sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) gene, complete sequence; and putative site-specific DNA endonuclease (orf167) gene, complete cds; chloroplast genes for chloroplast products Length = 5476 Score = 206 bits (104), Expect = 5e-50 Identities = 152/168 (90%) Strand = Plus / Plus Query: 149 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 208 ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||| |||| Sbjct: 2703 ccagtgagacggtgggggataagcttcatcgtcgagagggaaacagcccagatcatcagc 2762 Query: 209 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 268 |||||||||||||| || ||| |||| |||||||||| ||| ||||| ||||||| Sbjct: 2763 taaggcccctaaataacggctaagtgggaaaggaggtgaaaatgctcagacaaccaggag 2822 Query: 269 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactg 316 |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 2823 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactg 2870 Score = 105 bits (53), Expect = 1e-19 Identities = 74/81 (91%) Strand = Plus / Plus Query: 439 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 498 ||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| ||| Sbjct: 2999 gacgaagcggaagtgagaatgtcggtttgagtaacgaaaacatcggtgagaatcctttgc 3058 Query: 499 cccgaaaacccaaggtttcct 519 |||||||||| |||| ||||| Sbjct: 3059 cccgaaaacctaagggttcct 3079 Score = 71.9 bits (36), Expect = 2e-09 Identities = 91/107 (85%), Gaps = 3/107 (2%) Strand = Plus / Plus Query: 10 cgaaatgcgttgaggcgcagcagttgac--tggacatcta-ggggtaaagcactgtttcg 66 ||||||||||||||||||||| |||| | ||| | | || ||||||||||||||||||| Sbjct: 2578 cgaaatgcgttgaggcgcagcggttgtcgatgggcttttaaggggtaaagcactgtttcg 2637 Query: 67 gtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 113 ||||||||| | ||||||||||||||| ||||||| ||||||| Sbjct: 2638 atgcgggctgtgaaagcggtaccaaatcgttgcaaactaagaatact 2684
>gb|AY584516.1| Lyngbya majuscula str. CCAP 1446/4 23S ribosomal RNA gene, partial sequence Length = 2381 Score = 204 bits (103), Expect = 2e-49 Identities = 197/227 (86%), Gaps = 1/227 (0%) Strand = Plus / Plus Query: 149 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 208 ||||| ||||| || |||||||||| ||||||||||||||||||||||| || | ||||| Sbjct: 565 ccagtaagacggtgagggataagctccatcgtcgagagggaaacagcccagaccgccagc 624 Query: 209 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 268 ||||| ||| |||| | ||| |||||||||||||||||| ||||| ||||| ||||||| Sbjct: 625 taaggtccccaaataattgctaagtgataaaggaggtgggagtgcatagacaaccaggag 684 Query: 269 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 328 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 685 gtttgcctagaagcagcaatccttgaaagagtgcgtaatagctcactggtcaagcgctcc 744 Query: 329 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 375 | ||| ||| |||||||||||||||| || | ||||||||| ||||| Sbjct: 745 t-cgccgaaaatgaacggggctaagcaatttaccgaagctgcgggat 790 Score = 77.8 bits (39), Expect = 3e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 47 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 106 |||||||||||||||||||| ||||||||||| ||||||||||||| ||| |||||| Sbjct: 485 aggggtaaagcactgtttcgctgcgggctgcgagagcggtaccaaagtgagacaaactaa 544 Query: 107 gaatact 113 ||||||| Sbjct: 545 gaatact 551 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 448 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 507 |||| |||||||||||||| |||| |||||| || ||||||||| || |||||||| | Sbjct: 870 gaagtgagaatgtcggcttaagtagcgaaaatatgtgtgagaatcacataccccgaaacc 929 Query: 508 ccaaggtttcctccgcaagg 527 | |||| |||||||| |||| Sbjct: 930 ctaagggttcctccggaagg 949
>gb|AY584515.1| Oscillatoria sp. strain CCAP 1459/13 23S ribosomal RNA gene, partial sequence Length = 2381 Score = 204 bits (103), Expect = 2e-49 Identities = 197/227 (86%), Gaps = 1/227 (0%) Strand = Plus / Plus Query: 149 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 208 ||||| ||||| || |||||||||| ||||||||||||||||||||||| || | ||||| Sbjct: 565 ccagtaagacggtgagggataagctccatcgtcgagagggaaacagcccagaccgccagc 624 Query: 209 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 268 ||||| ||| |||| | ||| |||||||||||||||||| ||||| ||||| ||||||| Sbjct: 625 taaggtccccaaataattgctaagtgataaaggaggtgggagtgcatagacaaccaggag 684 Query: 269 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 328 ||||||||||||||||| | |||| ||||||||||||||||||||||| || ||||| | Sbjct: 685 gtttgcctagaagcagcaatccttgaaagagtgcgtaatagctcactggtcaagcgctcc 744 Query: 329 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggat 375 | ||| ||| |||||||||||||||| || | ||||||||| ||||| Sbjct: 745 t-cgccgaaaatgaacggggctaagcaatttaccgaagctgcgggat 790 Score = 77.8 bits (39), Expect = 3e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 47 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 106 |||||||||||||||||||| ||||||||||| ||||||||||||| ||| |||||| Sbjct: 485 aggggtaaagcactgtttcgctgcgggctgcgagagcggtaccaaagtgagacaaactaa 544 Query: 107 gaatact 113 ||||||| Sbjct: 545 gaatact 551 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 448 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 507 |||| |||||||||||||| |||| |||||| || ||||||||| || |||||||| | Sbjct: 870 gaagtgagaatgtcggcttaagtagcgaaaatatgtgtgagaatcacataccccgaaacc 929 Query: 508 ccaaggtttcctccgcaagg 527 | |||| |||||||| |||| Sbjct: 930 ctaagggttcctccggaagg 949
>gb|L43359.1|PZTCPRRNL Pterosperma cristatum large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 3371 Score = 202 bits (102), Expect = 8e-49 Identities = 192/222 (86%) Strand = Plus / Plus Query: 150 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 209 ||||||||| |||||||| ||||||||| ||||||||||||||||||| ||||||||| | Sbjct: 959 cagtgagactatgggggagaagcttcatagtcgagagggaaacagcccagatcaccagtt 1018 Query: 210 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 269 |||||||| ||| || ||| |||| |||||||||||| ||| |||||| |||||||| Sbjct: 1019 aaggccccaaaacgatagctaagtggaaaaggaggtgggcatgcgaagacaaccaggagg 1078 Query: 270 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 329 |||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | | Sbjct: 1079 tttgcctagaagcagccatccttgaaagagtgcgtaatagctcactggtcaagcgttcct 1138 Query: 330 gcgctgaagatgaacggggctaagcgatctgccgaagctgtg 371 |||| ||| ||||| ||| ||||| |||||||||| ||||| Sbjct: 1139 gcgccgaaaatgaatgggactaagttatctgccgaaactgtg 1180 Score = 85.7 bits (43), Expect = 1e-13 Identities = 61/67 (91%) Strand = Plus / Plus Query: 47 aggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 106 |||||||||||||||||||||||||||||||| || |||||||||||| |||||||| Sbjct: 874 aggggtaaagcactgtttcggtgcgggctgcgaaagtggtaccaaatcgtagcaaactca 933 Query: 107 gaatact 113 ||||||| Sbjct: 934 gaatact 940 Score = 46.1 bits (23), Expect = 0.12 Identities = 26/27 (96%) Strand = Plus / Plus Query: 448 gaagcgagaatgtcggcttgagtaacg 474 |||| |||||||||||||||||||||| Sbjct: 1259 gaagtgagaatgtcggcttgagtaacg 1285 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 gaaatgcgttgaggcgcagc 30 |||||||||||||||||||| Sbjct: 836 gaaatgcgttgaggcgcagc 855
>gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome Length = 135599 Score = 202 bits (102), Expect = 8e-49 Identities = 198/230 (86%) Strand = Plus / Minus Query: 148 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 207 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 114483 gccagttagacagtgggggataagctccattgtcaagagggaaacagcccagaccaccag 114424 Query: 208 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 267 |||||||||||||| ||| |||| |||||||||||| |||| ||||| |||||| Sbjct: 114423 ttaaggcccctaaatagtagctaagtggcaaaggaggtgggagtgcttagacaaccagga 114364 Query: 268 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 327 |||||||||||||||||| | |||||||||||||||||||||||||||| || ||||| | Sbjct: 114363 ggtttgcctagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgctc 114304 Query: 328 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 377 ||||| ||| ||||| ||| |||||| || ||||||||||||||||||| Sbjct: 114303 ctgcgccgaaaatgaatgggactaagctatttgccgaagctgtgggatgt 114254 Score = 202 bits (102), Expect = 8e-49 Identities = 198/230 (86%) Strand = Plus / Plus Query: 148 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 207 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 3034 gccagttagacagtgggggataagctccattgtcaagagggaaacagcccagaccaccag 3093 Query: 208 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 267 |||||||||||||| ||| |||| |||||||||||| |||| ||||| |||||| Sbjct: 3094 ttaaggcccctaaatagtagctaagtggcaaaggaggtgggagtgcttagacaaccagga 3153 Query: 268 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 327 |||||||||||||||||| | |||||||||||||||||||||||||||| || ||||| | Sbjct: 3154 ggtttgcctagaagcagcaatcctttaaagagtgcgtaatagctcactggtcaagcgctc 3213 Query: 328 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt 377 ||||| ||| ||||| ||| |||||| || ||||||||||||||||||| Sbjct: 3214 ctgcgccgaaaatgaatgggactaagctatttgccgaagctgtgggatgt 3263 Score = 129 bits (65), Expect = 1e-26 Identities = 68/69 (98%) Strand = Plus / Minus Query: 46 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 105 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 114564 taggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactc 114505 Query: 106 tgaatacta 114 ||||||||| Sbjct: 114504 tgaatacta 114496 Score = 129 bits (65), Expect = 1e-26 Identities = 68/69 (98%) Strand = Plus / Plus Query: 46 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 105 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 2953 taggggtaaagcactgtttcggtgcgggctgcgagagcggtaccaaatcgaggcaaactc 3012 Query: 106 tgaatacta 114 ||||||||| Sbjct: 3013 tgaatacta 3021 Score = 115 bits (58), Expect = 2e-22 Identities = 70/74 (94%) Strand = Plus / Minus Query: 446 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 505 |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 114176 cggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaa 114117 Query: 506 acccaaggtttcct 519 ||| |||| ||||| Sbjct: 114116 acctaagggttcct 114103 Score = 115 bits (58), Expect = 2e-22 Identities = 70/74 (94%) Strand = Plus / Plus Query: 446 cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 505 |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 3341 cggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaa 3400 Query: 506 acccaaggtttcct 519 ||| |||| ||||| Sbjct: 3401 acctaagggttcct 3414 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 385 catcggtaggggagcgttccg 405 ||||||||||||||||||||| Sbjct: 114237 catcggtaggggagcgttccg 114217 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 385 catcggtaggggagcgttccg 405 ||||||||||||||||||||| Sbjct: 3280 catcggtaggggagcgttccg 3300
>gb|AY584525.1| Plectonema terebrans strain CCAP 1463-4 23S ribosomal RNA gene, partial sequence Length = 2440 Score = 200 bits (101), Expect = 3e-48 Identities = 195/225 (86%), Gaps = 1/225 (0%) Strand = Plus / Plus Query: 148 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 207 |||||| ||||| ||||||||||||||||||||||| ||||||||||||| || |||||| Sbjct: 566 gccagtcagacggtgggggataagcttcatcgtcgaaagggaaacagcccagaccaccag 625 Query: 208 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 267 |||||| ||||||||| ||| |||| ||||||||||||| |||| ||||| |||||| Sbjct: 626 ctaaggtccctaaatggatgctaagtggtaaaggaggtgggattgcagagacaaccagga 685 Query: 268 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 327 |||||||||||||||||||| |||| ||||||||||||||||||||||| || |||| | Sbjct: 686 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgatc 745 Query: 328 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtgg 372 | ||| ||| ||||||||| |||||| || |||||||||||| Sbjct: 746 ct-cgccgaaaatgaacgggactaagcatcctaccgaagctgtgg 789 Score = 111 bits (56), Expect = 2e-21 Identities = 74/80 (92%) Strand = Plus / Plus Query: 448 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 507 |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 866 gaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaacc 925 Query: 508 ccaaggtttcctccgcaagg 527 | |||| |||||||| |||| Sbjct: 926 ctaagggttcctccggaagg 945 Score = 97.6 bits (49), Expect = 4e-17 Identities = 61/65 (93%) Strand = Plus / Plus Query: 48 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 107 |||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 487 ggggtaaagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactcag 546 Query: 108 aatac 112 ||||| Sbjct: 547 aatac 551
>gb|AC007729.3| Arabidopsis thaliana chromosome 2 BAC T18C6 genomic sequence, complete sequence Length = 114068 Score = 198 bits (100), Expect = 1e-47 Identities = 128/136 (94%), Gaps = 1/136 (0%) Strand = Plus / Minus Query: 182 gagagggaaacagcccggatcaccagctaaggcccctaaatgaccgctcagtgataaagg 241 |||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||| Sbjct: 57141 gagagggaaacagcccggatcaccagctaaggcccccaaatggccgctcagttataaagg 57082 Query: 242 aggtgggggtgcaaagacagcc-aggaggtttgcctagaagcagccaccctttaaagagt 300 |||| |||||||| |||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 57081 aggtaggggtgcagagacagccaaggaggtttgcctagaagcagccacccttgaaagagc 57022 Query: 301 gcgtaatagctcactg 316 |||||||||||||||| Sbjct: 57021 gcgtaatagctcactg 57006
>gb|DQ174248.1| Phaeodactylum tricornutum 16S ribosomal RNA, tRNA-Ile, tRNA-Ala, 23S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast Length = 5026 Score = 196 bits (99), Expect = 5e-47 Identities = 217/255 (85%), Gaps = 1/255 (0%) Strand = Plus / Plus Query: 150 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 209 ||||||||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| | Sbjct: 2691 cagtgagactgtgggggataagctccattgtcaagagggaaacagcccagagcaccagtt 2750 Query: 210 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 269 ||||||||||||| | ||| |||||||||||||||||| ||||| ||||| ||||||| Sbjct: 2751 aaggcccctaaataattgctaagtgataaaggaggtgggagtgcatagacaatcaggagg 2810 Query: 270 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 329 ||||| |||||||||| | |||||||||||||||||||||||||||||||||| | | Sbjct: 2811 tttgcttagaagcagcaatcctttaaagagtgcgtaatagctcactgatcgagtaaacct 2870 Query: 330 gcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgt-caaaatgcatc 388 |||| ||| ||| ||||| ||||| || ||||||| ||||| ||| | ||||| ||| Sbjct: 2871 gcgccgaaaatgtacgggactaagtaatttgccgaaactgtgcgatatataaaatatatc 2930 Query: 389 ggtaggggagcgttc 403 ||||||||||||||| Sbjct: 2931 ggtaggggagcgttc 2945 Score = 121 bits (61), Expect = 2e-24 Identities = 82/89 (92%) Strand = Plus / Plus Query: 439 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 498 |||||||| |||| |||||||||||||||||||||||||| || ||||||||||| || | Sbjct: 2981 gacgaagcagaagtgagaatgtcggcttgagtaacgaaaatataggtgagaatcctatac 3040 Query: 499 cccgaaaacccaaggtttcctccgcaagg 527 |||||||||||||||||||||||| |||| Sbjct: 3041 cccgaaaacccaaggtttcctccggaagg 3069
>gb|AY835431.1| Pseudendoclonium akinetum chloroplast, complete genome Length = 195867 Score = 196 bits (99), Expect = 5e-47 Identities = 186/215 (86%) Strand = Plus / Plus Query: 161 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 220 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 192830 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 192889 Query: 221 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 280 ||| ||||| |||| |||||||||| |||| ||||| |||| |||||||| ||||| Sbjct: 192890 atggccgctaagtggcaaaggaggtgaaaatgcagagacaaccagaaggtttgcttagaa 192949 Query: 281 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 340 ||||||| |||| ||||||||||||||||||||||| | ||||| |||||| ||| || Sbjct: 192950 gcagccatccttaaaagagtgcgtaatagctcactggtagagcgtttttgcgccgaaaat 193009 Query: 341 gaacggggctaagcgatctgccgaagctgtgggat 375 ||||||| ||||||| |||||||||||||||||| Sbjct: 193010 gaacgggactaagcggcctgccgaagctgtgggat 193044 Score = 196 bits (99), Expect = 5e-47 Identities = 186/215 (86%) Strand = Plus / Minus Query: 161 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 220 ||||||||||||||||| ||| | ||||||||||||| || ||||||||||||||||||| Sbjct: 143952 tgggggataagcttcattgtcaaaagggaaacagcccagaccaccagctaaggcccctaa 143893 Query: 221 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 280 ||| ||||| |||| |||||||||| |||| ||||| |||| |||||||| ||||| Sbjct: 143892 atggccgctaagtggcaaaggaggtgaaaatgcagagacaaccagaaggtttgcttagaa 143833 Query: 281 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 340 ||||||| |||| ||||||||||||||||||||||| | ||||| |||||| ||| || Sbjct: 143832 gcagccatccttaaaagagtgcgtaatagctcactggtagagcgtttttgcgccgaaaat 143773 Query: 341 gaacggggctaagcgatctgccgaagctgtgggat 375 ||||||| ||||||| |||||||||||||||||| Sbjct: 143772 gaacgggactaagcggcctgccgaagctgtgggat 143738 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 434 gggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcc 493 |||| ||||| ||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 193107 gggttgacgacgcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatcc 193166 Query: 494 aatgccccgaaaacccaaggtttcct 519 |||| |||||||||| |||| ||||| Sbjct: 193167 aatgtcccgaaaacctaagggttcct 193192 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 434 gggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcc 493 |||| ||||| ||||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 143675 gggttgacgacgcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatcc 143616 Query: 494 aatgccccgaaaacccaaggtttcct 519 |||| |||||||||| |||| ||||| Sbjct: 143615 aatgtcccgaaaacctaagggttcct 143590 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Plus Query: 46 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 105 ||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||| Sbjct: 192732 taggggtaaagcactgtttcggtgcgggctgcgaaagcggtactaaatcgtcgcaaacta 192791 Query: 106 tgaatacta 114 |||||||| Sbjct: 192792 agaatacta 192800 Score = 81.8 bits (41), Expect = 2e-12 Identities = 62/69 (89%) Strand = Plus / Minus Query: 46 taggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactc 105 ||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||| Sbjct: 144050 taggggtaaagcactgtttcggtgcgggctgcgaaagcggtactaaatcgtcgcaaacta 143991 Query: 106 tgaatacta 114 |||||||| Sbjct: 143990 agaatacta 143982
>gb|L43541.1|PDWCPRRNL Pedinomonas tuberculata chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 3875 Score = 196 bits (99), Expect = 5e-47 Identities = 195/227 (85%) Strand = Plus / Plus Query: 148 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 207 |||||||||||| |||| |||||| ||||||||| ||||||||||||||| || || ||| Sbjct: 969 gccagtgagacggtgggcgataaggttcatcgtcaagagggaaacagcccagaccatcag 1028 Query: 208 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 267 |||||||||| ||||| ||||| |||| |||||||||| | ||| | ||| |||||| Sbjct: 1029 ctaaggccccaaaatggccgctaagtggcaaaggaggtgagaatgctgaaacaaccagga 1088 Query: 268 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 327 ||||||| |||||||||||| |||||||||||||||||||||||||||| | |||| | Sbjct: 1089 ggtttgcttagaagcagccatcctttaaagagtgcgtaatagctcactggtaaagcgttc 1148 Query: 328 ttgcgctgaagatgaacggggctaagcgatctgccgaagctgtggga 374 |||||| ||| |||| |||| ||||||| ||||||||||||||||| Sbjct: 1149 ttgcgccgaaaatgatcgggactaagcggcctgccgaagctgtggga 1195 Score = 113 bits (57), Expect = 6e-22 Identities = 60/61 (98%) Strand = Plus / Plus Query: 445 gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 504 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1275 gcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 1334 Query: 505 a 505 | Sbjct: 1335 a 1335 Score = 89.7 bits (45), Expect = 9e-15 Identities = 66/73 (90%) Strand = Plus / Plus Query: 44 tctaggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaac 103 |||||||||||||| |||||||| ||||||||||| ||||||||||||||| ||||||| Sbjct: 882 tctaggggtaaagctctgtttcgatgcgggctgcgaaagcggtaccaaatcgtggcaaac 941 Query: 104 tctgaatactaga 116 | |||||||||| Sbjct: 942 taagaatactaga 954 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagc 30 |||||||||||||||||||||| Sbjct: 844 ccgaaatgcgttgaggcgcagc 865 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 387 tcggtaggggagcgttccgcc 407 ||||||||||||||||||||| Sbjct: 1217 tcggtaggggagcgttccgcc 1237
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 194 bits (98), Expect = 2e-46 Identities = 179/206 (86%) Strand = Plus / Plus Query: 148 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 207 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 1659443 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 1659502 Query: 208 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 267 |||||| || |||| | || |||||||||||||||||| ||||| ||||| |||||| Sbjct: 1659503 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagacaaccagga 1659562 Query: 268 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 327 |||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| | Sbjct: 1659563 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgctc 1659622 Query: 328 ttgcgctgaagatgaacggggctaag 353 ||||| ||| ||||||||||||||| Sbjct: 1659623 ctgcgccgaaaatgaacggggctaag 1659648 Score = 194 bits (98), Expect = 2e-46 Identities = 179/206 (86%) Strand = Plus / Minus Query: 148 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 207 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 1049301 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 1049242 Query: 208 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 267 |||||| || |||| | || |||||||||||||||||| ||||| ||||| |||||| Sbjct: 1049241 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagacaaccagga 1049182 Query: 268 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 327 |||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| | Sbjct: 1049181 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgctc 1049122 Query: 328 ttgcgctgaagatgaacggggctaag 353 ||||| ||| ||||||||||||||| Sbjct: 1049121 ctgcgccgaaaatgaacggggctaag 1049096 Score = 113 bits (57), Expect = 6e-22 Identities = 81/89 (91%) Strand = Plus / Plus Query: 439 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 498 |||||| |||||| ||||||||||||||||||| ||||||||| ||||||||||| |||| Sbjct: 1659733 gacgaaacggaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgc 1659792 Query: 499 cccgaaaacccaaggtttcctccgcaagg 527 ||||||| ||||||| |||||||| |||| Sbjct: 1659793 cccgaaatcccaagggttcctccggaagg 1659821 Score = 113 bits (57), Expect = 6e-22 Identities = 81/89 (91%) Strand = Plus / Minus Query: 439 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 498 |||||| |||||| ||||||||||||||||||| ||||||||| ||||||||||| |||| Sbjct: 1049011 gacgaaacggaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgc 1048952 Query: 499 cccgaaaacccaaggtttcctccgcaagg 527 ||||||| ||||||| |||||||| |||| Sbjct: 1048951 cccgaaatcccaagggttcctccggaagg 1048923 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 48 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 107 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1659364 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 1659423 Query: 108 aatac 112 ||||| Sbjct: 1659424 aatac 1659428 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 48 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 107 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1049380 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 1049321 Query: 108 aatac 112 ||||| Sbjct: 1049320 aatac 1049316
>gb|L42992.1|TESCPRGOL Tetraselmis carteriiformis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2552 Score = 194 bits (98), Expect = 2e-46 Identities = 218/258 (84%) Strand = Plus / Plus Query: 149 ccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagc 208 |||||||||| ||||||||||||||||| ||||||||||||||||||| ||||| |||| Sbjct: 935 ccagtgagacagtgggggataagcttcattgtcgagagggaaacagcccagatcatcagc 994 Query: 209 taaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggag 268 |||||||||||||| | || |||| |||||||||| | ||| ||||| |||| || Sbjct: 995 taaggcccctaaataatttctaagtgggaaaggaggtgagaatgctgagacaaccagaag 1054 Query: 269 gtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccct 328 |||||| ||||||||||||||||||||||||||||||||||||||||| | |||| | Sbjct: 1055 gtttgcttagaagcagccaccctttaaagagtgcgtaatagctcactggttaagcgtttt 1114 Query: 329 tgcgctgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatc 388 ||||| ||| ||| |||| ||||| || ||||||||||||||||| || || ||| Sbjct: 1115 tgcgccgaaaatgctcgggactaagaaatttgccgaagctgtgggatatcgtaagatatc 1174 Query: 389 ggtaggggagcgttccgc 406 |||||||||||||||||| Sbjct: 1175 ggtaggggagcgttccgc 1192 Score = 129 bits (65), Expect = 1e-26 Identities = 77/81 (95%) Strand = Plus / Plus Query: 439 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 498 ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1225 gacgaagcggaagtgagaatgtcggtttgagtaacgaaaacattggtgagaatccaatgc 1284 Query: 499 cccgaaaacccaaggtttcct 519 |||||||||| |||| ||||| Sbjct: 1285 cccgaaaacctaagggttcct 1305 Score = 99.6 bits (50), Expect = 9e-18 Identities = 94/108 (87%), Gaps = 3/108 (2%) Strand = Plus / Plus Query: 9 ccgaaatgcgttgaggcgcagcagttg---actggacatctaggggtaaagcactgtttc 65 |||||||||||||||||||||| |||| | || | || ||||||||||||||||||| Sbjct: 809 ccgaaatgcgttgaggcgcagcggttgttgatgggtcgtcaaggggtaaagcactgtttc 868 Query: 66 ggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaatact 113 ||||||||||||| ||||||||||||||| |||||||| ||||||| Sbjct: 869 ggtgcgggctgcgaaagcggtaccaaatcgtggcaaactaagaatact 916
>emb|X00512.1|ANRN03 Anacystis nidulans 23S rRNA gene and flanking regions Length = 3282 Score = 194 bits (98), Expect = 2e-46 Identities = 179/206 (86%) Strand = Plus / Plus Query: 148 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 207 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 1205 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 1264 Query: 208 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 267 |||||| || |||| | || |||||||||||||||||| ||||| ||||| |||||| Sbjct: 1265 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagacaaccagga 1324 Query: 268 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 327 |||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| | Sbjct: 1325 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgctc 1384 Query: 328 ttgcgctgaagatgaacggggctaag 353 ||||| ||| ||||||||||||||| Sbjct: 1385 ctgcgccgaaaatgaacggggctaag 1410 Score = 113 bits (57), Expect = 6e-22 Identities = 81/89 (91%) Strand = Plus / Plus Query: 439 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 498 |||||| |||||| ||||||||||||||||||| ||||||||| ||||||||||| |||| Sbjct: 1495 gacgaaacggaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgc 1554 Query: 499 cccgaaaacccaaggtttcctccgcaagg 527 ||||||| ||||||| |||||||| |||| Sbjct: 1555 cccgaaatcccaagggttcctccggaagg 1583 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 48 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 107 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1126 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 1185 Query: 108 aatac 112 ||||| Sbjct: 1186 aatac 1190
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 194 bits (98), Expect = 2e-46 Identities = 179/206 (86%) Strand = Plus / Minus Query: 148 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 207 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 2657343 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 2657284 Query: 208 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 267 |||||| || |||| | || |||||||||||||||||| ||||| ||||| |||||| Sbjct: 2657283 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagacaaccagga 2657224 Query: 268 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 327 |||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| | Sbjct: 2657223 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgctc 2657164 Query: 328 ttgcgctgaagatgaacggggctaag 353 ||||| ||| ||||||||||||||| Sbjct: 2657163 ctgcgccgaaaatgaacggggctaag 2657138 Score = 194 bits (98), Expect = 2e-46 Identities = 179/206 (86%) Strand = Plus / Plus Query: 148 gccagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccag 207 |||||| |||| ||||||||||||| ||| ||| ||||||||||||||| || |||||| Sbjct: 571578 gccagtcagactgtgggggataagctccatggtcaagagggaaacagcccagaccaccag 571637 Query: 208 ctaaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccagga 267 |||||| || |||| | || |||||||||||||||||| ||||| ||||| |||||| Sbjct: 571638 ctaaggtcctcaaatcagaacttagtgataaaggaggtgggagtgcatagacaaccagga 571697 Query: 268 ggtttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccc 327 |||||||||||||||||||| |||| ||||||||||||||||||||||| || ||||| | Sbjct: 571698 ggtttgcctagaagcagccatccttaaaagagtgcgtaatagctcactggtcaagcgctc 571757 Query: 328 ttgcgctgaagatgaacggggctaag 353 ||||| ||| ||||||||||||||| Sbjct: 571758 ctgcgccgaaaatgaacggggctaag 571783 Score = 113 bits (57), Expect = 6e-22 Identities = 81/89 (91%) Strand = Plus / Minus Query: 439 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 498 |||||| |||||| ||||||||||||||||||| ||||||||| ||||||||||| |||| Sbjct: 2657053 gacgaaacggaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgc 2656994 Query: 499 cccgaaaacccaaggtttcctccgcaagg 527 ||||||| ||||||| |||||||| |||| Sbjct: 2656993 cccgaaatcccaagggttcctccggaagg 2656965 Score = 113 bits (57), Expect = 6e-22 Identities = 81/89 (91%) Strand = Plus / Plus Query: 439 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 498 |||||| |||||| ||||||||||||||||||| ||||||||| ||||||||||| |||| Sbjct: 571868 gacgaaacggaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgc 571927 Query: 499 cccgaaaacccaaggtttcctccgcaagg 527 ||||||| ||||||| |||||||| |||| Sbjct: 571928 cccgaaatcccaagggttcctccggaagg 571956 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 48 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 107 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 2657422 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 2657363 Query: 108 aatac 112 ||||| Sbjct: 2657362 aatac 2657358 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Plus Query: 48 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 107 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 571499 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagtcaaactccg 571558 Query: 108 aatac 112 ||||| Sbjct: 571559 aatac 571563
>gb|L49154.1|MNXCPRGOLA Monomastix sp. OKE-1 large subunit ribosomal RNA gene, partial sequence; and putative protein genes, complete cds; chloroplast Length = 6151 Score = 192 bits (97), Expect = 8e-46 Identities = 190/221 (85%) Strand = Plus / Plus Query: 151 agtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagcta 210 |||||||| |||| |||||| ||||| ||| ||||||||||||||| |||||||||||| Sbjct: 964 agtgagacagtgggcgataaggttcattgtcaagagggaaacagcccagatcaccagcta 1023 Query: 211 aggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggt 270 |||||||||||| | || |||| ||||||||||||| |||| |||||||||| |||| Sbjct: 1024 aggcccctaaataagtactaagtggtaaaggaggtgggagtgctaagacagccaaaaggt 1083 Query: 271 ttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttg 330 ||||||||||||||||| |||| || |||||||||| |||||| || |||||||| |||| Sbjct: 1084 ttgcctagaagcagccatccttgaacgagtgcgtaacagctcattggtcgagcgctcttg 1143 Query: 331 cgctgaagatgaacggggctaagcgatctgccgaagctgtg 371 ||| ||| ||||||||| ||||| | ||||||||||||| Sbjct: 1144 cgccgaaaatgaacgggactaagtactttgccgaagctgtg 1184 Score = 75.8 bits (38), Expect = 1e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 439 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 498 |||||||| |||| ||||||||| |||||||||||||||||| ||| ||||| ||| Sbjct: 1255 gacgaagcagaagtgagaatgtcagcttgagtaacgaaaacagcagtgtgaatctgctgc 1314 Query: 499 cccgaaaacccaaggtttcctc 520 ||||||||||||||| |||||| Sbjct: 1315 cccgaaaacccaagggttcctc 1336 Score = 73.8 bits (37), Expect = 5e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 48 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaact 104 ||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||| Sbjct: 878 ggggtaaagcactgtatcggtgcgggctgcgaaagcggtaccaaatcgtagcaaact 934
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 192 bits (97), Expect = 8e-46 Identities = 178/205 (86%) Strand = Plus / Minus Query: 150 cagtgagacgatgggggataagcttcatcgtcgagagggaaacagcccggatcaccagct 209 ||||||||| ||||||||||||| ||| ||||||||||||||||||| || ||||| || Sbjct: 1569819 cagtgagactgtgggggataagctccatggtcgagagggaaacagcccagaccaccaact 1569760 Query: 210 aaggcccctaaatgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggagg 269 |||| ||| |||| |||||||||| ||||||||||| |||| ||||| |||||||| Sbjct: 1569759 aaggtccccaaattgtagctcagtgattaaggaggtgggattgcacagacaaccaggagg 1569700 Query: 270 tttgcctagaagcagccaccctttaaagagtgcgtaatagctcactgatcgagcgccctt 329 || |||||||||||||||||||| ||||||||||||||||||||||| || |||| | | Sbjct: 1569699 ttggcctagaagcagccacccttgaaagagtgcgtaatagctcactggtcaagcgatcct 1569640 Query: 330 gcgctgaagatgaacggggctaagc 354 |||| ||| |||||||||||||||| Sbjct: 1569639 gcgccgaaaatgaacggggctaagc 1569615 Score = 113 bits (57), Expect = 6e-22 Identities = 81/89 (91%) Strand = Plus / Minus Query: 439 gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 498 ||||| ||||||| ||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 1569539 gacgaggcggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 1569480 Query: 499 cccgaaaacccaaggtttcctccgcaagg 527 |||||| | |||||||||||||| |||| Sbjct: 1569479 tccgaaagcacaaggtttcctccggaagg 1569451 Score = 89.7 bits (45), Expect = 9e-15 Identities = 60/65 (92%) Strand = Plus / Minus Query: 48 ggggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctg 107 |||||| ||||||| |||||||||||||||| |||||||||||||||||| ||||||| | Sbjct: 1569901 ggggtagagcactgattcggtgcgggctgcgagagcggtaccaaatcgagccaaactccg 1569842 Query: 108 aatac 112 ||||| Sbjct: 1569841 aatac 1569837
>emb|AM084273.1| Paulinella chromatophora plastid 16S rRNA gene (partial), 23S rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1, strain M 0880 Length = 4934 Score = 192 bits (97), Expect = 8e-46 Identities = 181/209 (86%) Strand = Plus / Plus Query: 161 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 220 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| |||||| Sbjct: 3172 tgggggataagctccatggtcaagagggaaacagcccagaccgccagctaaggtccctaa 3231 Query: 221 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 280 || | |||| |||||||||||||||||| ||| ||||| ||||||||||||||||||| Sbjct: 3232 ataagcgctaagtgataaaggaggtgggattgcccagacaaccaggaggtttgcctagaa 3291 Query: 281 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 340 ||||||| ||| || |||||||||||||||||||| ||||||| | ||||| ||| || Sbjct: 3292 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcgccgaaaat 3351 Query: 341 gaacggggctaagcgatctgccgaagctg 369 ||||||||||||||| | | ||||||||| Sbjct: 3352 gaacggggctaagcgttttaccgaagctg 3380 Score = 91.7 bits (46), Expect = 2e-15 Identities = 62/66 (93%), Gaps = 1/66 (1%) Strand = Plus / Plus Query: 48 ggggtaaagc-actgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactct 106 |||||||||| ||||||||||| ||||||||| |||||||||||||||||| |||||||| Sbjct: 3079 ggggtaaagccactgtttcggtacgggctgcgagagcggtaccaaatcgagacaaactct 3138 Query: 107 gaatac 112 |||||| Sbjct: 3139 gaatac 3144 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 448 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 507 |||| ||||||||||||||||||| ||||||||| ||||||||||| ||||||||||| | Sbjct: 3453 gaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgccccgaaacc 3512 Query: 508 ccaaggtttcct 519 | |||| ||||| Sbjct: 3513 ctaagggttcct 3524
>dbj|AP005504.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0577B11 Length = 180355 Score = 188 bits (95), Expect = 1e-44 Identities = 151/167 (90%), Gaps = 2/167 (1%) Strand = Plus / Minus Query: 50 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 109 |||||||||| |||| |||||||| ||| ||||||| ||||||||||| ||||||||||| Sbjct: 59055 ggtaaagcaccgtttaggtgcgggttgcacgagcggcaccaaatcgagacaaactctgaa 58996 Query: 110 tactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggata 169 ||||||||||||||||||| |||||||||||| | |||| ||||||||||||||||||| Sbjct: 58995 tactagatatgacccaaaagtaacaggggtcatgatcgg-tagtgagacgatgggggata 58937 Query: 170 agcttcatcgtcgagagggaaac-agcccggatcaccagctaaggcc 215 ||||||||||||||||| ||||| | ||| |||||||||||||||| Sbjct: 58936 agcttcatcgtcgagagagaaacaaccccaaatcaccagctaaggcc 58890 Score = 109 bits (55), Expect = 9e-21 Identities = 90/102 (88%), Gaps = 6/102 (5%) Strand = Plus / Minus Query: 204 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtggggg------tgcaaag 257 ||||||||| || ||||||||||||| ||| ||||| |||||||||| ||||||| Sbjct: 58891 ccagctaagaccactaaatgaccgcttagttataaatgaggtgggggggggggtgcaaag 58832 Query: 258 acagccaggaggtttgcctagaagcagccaccctttaaagag 299 ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 58831 acaaccaggaggtttgcctagaagcagccaccctttaaagag 58790 Score = 77.8 bits (39), Expect = 3e-11 Identities = 45/47 (95%) Strand = Plus / Minus Query: 365 agctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 411 |||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 58791 agctatgggatatcaaaatgcatcggtaggggagcgttccgccttag 58745
>dbj|AP004635.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0672D01 Length = 146954 Score = 188 bits (95), Expect = 1e-44 Identities = 151/167 (90%), Gaps = 2/167 (1%) Strand = Plus / Minus Query: 50 ggtaaagcactgtttcggtgcgggctgcgcgagcggtaccaaatcgaggcaaactctgaa 109 |||||||||| |||| |||||||| ||| ||||||| ||||||||||| ||||||||||| Sbjct: 136266 ggtaaagcaccgtttaggtgcgggttgcacgagcggcaccaaatcgagacaaactctgaa 136207 Query: 110 tactagatatgacccaaaaataacaggggtcaaggtcggccagtgagacgatgggggata 169 ||||||||||||||||||| |||||||||||| | |||| ||||||||||||||||||| Sbjct: 136206 tactagatatgacccaaaagtaacaggggtcatgatcgg-tagtgagacgatgggggata 136148 Query: 170 agcttcatcgtcgagagggaaac-agcccggatcaccagctaaggcc 215 ||||||||||||||||| ||||| | ||| |||||||||||||||| Sbjct: 136147 agcttcatcgtcgagagagaaacaaccccaaatcaccagctaaggcc 136101 Score = 109 bits (55), Expect = 9e-21 Identities = 90/102 (88%), Gaps = 6/102 (5%) Strand = Plus / Minus Query: 204 ccagctaaggcccctaaatgaccgctcagtgataaaggaggtggggg------tgcaaag 257 ||||||||| || ||||||||||||| ||| ||||| |||||||||| ||||||| Sbjct: 136102 ccagctaagaccactaaatgaccgcttagttataaatgaggtgggggggggggtgcaaag 136043 Query: 258 acagccaggaggtttgcctagaagcagccaccctttaaagag 299 ||| |||||||||||||||||||||||||||||||||||||| Sbjct: 136042 acaaccaggaggtttgcctagaagcagccaccctttaaagag 136001 Score = 77.8 bits (39), Expect = 3e-11 Identities = 45/47 (95%) Strand = Plus / Minus Query: 365 agctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 411 |||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 136002 agctatgggatatcaaaatgcatcggtaggggagcgttccgccttag 135956
>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome Length = 1709204 Score = 184 bits (93), Expect = 2e-43 Identities = 180/209 (86%) Strand = Plus / Plus Query: 161 tgggggataagcttcatcgtcgagagggaaacagcccggatcaccagctaaggcccctaa 220 ||||||||||||| ||| ||| ||||||||||||||| || | |||||||||| ||| || Sbjct: 320554 tgggggataagctccatagtcaagagggaaacagcccagaccgccagctaaggtcccaaa 320613 Query: 221 atgaccgctcagtgataaaggaggtgggggtgcaaagacagccaggaggtttgcctagaa 280 || | |||| |||||||||||||||||| ||| ||||| ||||||||||||||||||| Sbjct: 320614 attaacgctaagtgataaaggaggtgggattgcccagacaaccaggaggtttgcctagaa 320673 Query: 281 gcagccaccctttaaagagtgcgtaatagctcactgatcgagcgcccttgcgctgaagat 340 ||||||| ||| || |||||||||||||||||||| ||||||| | ||||| ||| || Sbjct: 320674 gcagccatcctcaaaggagtgcgtaatagctcactggtcgagcgatcctgcgccgaaaat 320733 Query: 341 gaacggggctaagcgatctgccgaagctg 369 ||||||||||||||| | | ||||||||| Sbjct: 320734 gaacggggctaagcgttataccgaagctg 320762 Score = 93.7 bits (47), Expect = 6e-16 Identities = 68/75 (90%) Strand = Plus / Plus Query: 448 gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 507 |||| ||||||||||||||||||| ||||||||| ||||||||||| ||||||||||| | Sbjct: 320838 gaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgccccgaaacc 320897 Query: 508 ccaaggtttcctccg 522 | |||| |||||||| Sbjct: 320898 ctaagggttcctccg 320912 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 62 tttcggtgcgggctgcgcgagcggtaccaaatcga 96 ||||||||||||||||| |||||||||||||||| Sbjct: 320476 tttcggtgcgggctgcgaaagcggtaccaaatcga 320510 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,185,393 Number of Sequences: 3902068 Number of extensions: 3185393 Number of successful extensions: 57640 Number of sequences better than 10.0: 2363 Number of HSP's better than 10.0 without gapping: 2394 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 44597 Number of HSP's gapped (non-prelim): 12364 length of query: 527 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 504 effective length of database: 17,143,297,704 effective search space: 8640222042816 effective search space used: 8640222042816 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
