ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd24i15 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB038775.1| Hordeum vulgare mRNA for IDI2, complete cds Length = 1403 Score = 1185 bits (598), Expect = 0.0 Identities = 646/654 (98%), Gaps = 6/654 (0%) Strand = Plus / Plus Query: 2 gccgcccctcccctgcttcctcacttcctcc-tccga-ccgtccg-gtttctccgaattt 58 ||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||| Sbjct: 18 gccgcccctcccctgcttcctcacttcctccatccgagccgtccgagtttctccgaattt 77 Query: 59 cacggccagnaatgggcgaatcgagcgcgcttcagtccatcctctacggccgcggcgcgc 118 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78 cacggccag-aatgggcgaatcgagcgcgcttcagtccatcctctacggccgcggcgcgc 136 Query: 119 tccgcctcctcgatcagaggaagctgcccctcgaggaggtctacgtcgacgtcaaggnac 178 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 137 tccgcctcctcgatcagaggaagctgcccctcgaggaggtctacgtcgacgtcaagg-ac 195 Query: 179 tccgcggnatggatggaatgcgatcagagacatggttgtccgtggtgctcctgccatagc 238 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 196 tccgcgg-atggatggaatgcgatcagagacatggttgtccgtggtgctcctgccatagc 254 Query: 239 catagcagcagcactatcattggctgtggaagttaatgatcacaatttcattggtacacc 298 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 255 catagcagcagcactatcattggctgtggaagttaatgatcacaatttcattggtacacc 314 Query: 299 tgcggaagcagcctcgttcgtttccaagaagttggaataccttgtatccagccggcccac 358 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 315 cgcggaagcagcctcgttcgtttccaagaagttggaataccttgtatccagccggcccac 374 Query: 359 agcagtgaacctgtctgatgctgctacaaagcttcagaacttggtgtcaacaacagctga 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 375 agcagtgaacctgtctgatgctgctacaaagcttcagaacttggtgtcaacaacagctga 434 Query: 419 aacagcaaaagatgccaaatctatctttcaggtcttcattgaagctgcagagactatgct 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 435 aacagcaaaagatgccaaatctatctttcaggtcttcattgaagctgcagagactatgct 494 Query: 479 agttgatgatgtggctgataataaggcaattggtttgcatggagctgaattccttcaacg 538 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 495 agttgatgatgtggctgataataaggcaattggtttgcatggagctgaattccttcaacg 554 Query: 539 gcagcttggaagttcaaaaaacatttctgttctaacccattgtaatactggcagccttgc 598 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 555 gcagcttggaagttcgaaaaacatttctgttctaacccattgtaatactggcagccttgc 614 Query: 599 aaccgctggttatggaactgcccttggggttattcgtgctcttcactctggagg 652 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 615 aaccgctggttatggaactgcccttggggttattcgtgctcttcactctggagg 668
>gb|AY738148.1| Zea mays isopentenyl-diphosphate delta isomerase 2 mRNA, complete cds Length = 1382 Score = 446 bits (225), Expect = e-122 Identities = 478/560 (85%), Gaps = 2/560 (0%) Strand = Plus / Plus Query: 84 cgcgcttcagtccatcctctacggccgcggcgcgctccgcctcctcgatcagaggaagct 143 |||||| ||||||||| | ||| |||| || |||||||||||||||||||||||||||| Sbjct: 148 cgcgctgcagtccatcgtttacagccgtgggtcgctccgcctcctcgatcagaggaagct 207 Query: 144 gcccctcgaggaggtctacgtcgacgtcaaggnactccgcggnatggatggaatgcgatc 203 ||| |||||| || ||| ||||||||||| ||||| | |||| |||||||| || Sbjct: 208 gccgctcgagatggagtacatcgacgtcaagagt-tccgccg-atggctggaatgcaata 265 Query: 204 agagacatggttgtccgtggtgctcctgccatagccatagcagcagcactatcattggct 263 |||||||||||||||||||||||||| || |||||||||||||| |||||| |||| || Sbjct: 266 agagacatggttgtccgtggtgctccagcaatagccatagcagcggcactagcattagcc 325 Query: 264 gtggaagttaatgatcacaatttcattggtacacctgcggaagcagcctcgttcgtttcc 323 || |||||| |||| |||| |||||||| |||| |||||||| || || ||||| Sbjct: 326 gttgaagtttctgatttagattttattggtacgcctgaagaagcagcttcttttgtttca 385 Query: 324 aagaagttggaataccttgtatccagccggcccacagcagtgaacctgtctgatgctgct 383 ||||| ||||||||||||||||||||||| || || ||||||||||| ||||||||||| Sbjct: 386 aagaaattggaataccttgtatccagccgaccaactgcagtgaacctatctgatgctgca 445 Query: 384 acaaagcttcagaacttggtgtcaacaacagctgaaacagcaaaagatgccaaatctatc 443 |||||||| || | ||||| |||| |||||||||| ||||||||| |||| |||||| Sbjct: 446 acaaagctccaaactttggtatcaaaggcagctgaaactgcaaaagattccaagtctatc 505 Query: 444 tttcaggtcttcattgaagctgcagagactatgctagttgatgatgtggctgataataag 503 |||||||||| |||||| || |||||||| ||||| |||||||||||||| |||||||| Sbjct: 506 tttcaggtctacattgaggccgcagagacgatgcttgttgatgatgtggcagataataaa 565 Query: 504 gcaattggtttgcatggagctgaattccttcaacggcagcttggaagttcaaaaaacatt 563 || ||||| | |||||||||| ||| |||||| ||||||||| || ||||||||| || Sbjct: 566 gctattggctcacatggagctgtatttcttcaaaggcagcttgcaaattcaaaaaagata 625 Query: 564 tctgttctaacccattgtaatactggcagccttgcaaccgctggttatggaactgccctt 623 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 626 tctgttctaacccattgtaatactggcagtcttgcaactgctggttatggaactgccctt 685 Query: 624 ggggttattcgtgctcttca 643 |||||||| || |||||||| Sbjct: 686 ggggttatacgcgctcttca 705
>gb|AY104678.1| Zea mays PCO081661 mRNA sequence Length = 1558 Score = 446 bits (225), Expect = e-122 Identities = 478/560 (85%), Gaps = 2/560 (0%) Strand = Plus / Plus Query: 84 cgcgcttcagtccatcctctacggccgcggcgcgctccgcctcctcgatcagaggaagct 143 |||||| ||||||||| | ||| |||| || |||||||||||||||||||||||||||| Sbjct: 148 cgcgctgcagtccatcgtttacagccgtgggtcgctccgcctcctcgatcagaggaagct 207 Query: 144 gcccctcgaggaggtctacgtcgacgtcaaggnactccgcggnatggatggaatgcgatc 203 ||| |||||| || ||| ||||||||||| ||||| | |||| |||||||| || Sbjct: 208 gccgctcgagatggagtacatcgacgtcaagagt-tccgccg-atggctggaatgcaata 265 Query: 204 agagacatggttgtccgtggtgctcctgccatagccatagcagcagcactatcattggct 263 |||||||||||||||||||||||||| || |||||||||||||| |||||| |||| || Sbjct: 266 agagacatggttgtccgtggtgctccagcaatagccatagcagcggcactagcattagcc 325 Query: 264 gtggaagttaatgatcacaatttcattggtacacctgcggaagcagcctcgttcgtttcc 323 || |||||| |||| |||| |||||||| |||| |||||||| || || ||||| Sbjct: 326 gttgaagtttctgatttagattttattggtacgcctgaagaagcagcttcttttgtttca 385 Query: 324 aagaagttggaataccttgtatccagccggcccacagcagtgaacctgtctgatgctgct 383 ||||| ||||||||||||||||||||||| || || ||||||||||| ||||||||||| Sbjct: 386 aagaaattggaataccttgtatccagccgaccaactgcagtgaacctatctgatgctgca 445 Query: 384 acaaagcttcagaacttggtgtcaacaacagctgaaacagcaaaagatgccaaatctatc 443 |||||||| || | ||||| |||| |||||||||| ||||||||| |||| |||||| Sbjct: 446 acaaagctccaaactttggtatcaaaggcagctgaaactgcaaaagattccaagtctatc 505 Query: 444 tttcaggtcttcattgaagctgcagagactatgctagttgatgatgtggctgataataag 503 |||||||||| |||||| || |||||||| ||||| |||||||||||||| |||||||| Sbjct: 506 tttcaggtctacattgaggccgcagagacgatgcttgttgatgatgtggcagataataaa 565 Query: 504 gcaattggtttgcatggagctgaattccttcaacggcagcttggaagttcaaaaaacatt 563 || ||||| | |||||||||| ||| |||||| ||||||||| || ||||||||| || Sbjct: 566 gctattggctcacatggagctgtatttcttcaaaggcagcttgcaaattcaaaaaagata 625 Query: 564 tctgttctaacccattgtaatactggcagccttgcaaccgctggttatggaactgccctt 623 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct: 626 tctgttctaacccattgtaatactggcagtcttgcaactgctggttatggaactgccctt 685 Query: 624 ggggttattcgtgctcttca 643 |||||||| || |||||||| Sbjct: 686 ggggttatacgcgctcttca 705
>dbj|AK100869.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023124H10, full insert sequence Length = 1344 Score = 214 bits (108), Expect = 3e-52 Identities = 281/336 (83%), Gaps = 2/336 (0%) Strand = Plus / Plus Query: 318 gtttccaagaagttggaataccttgtatccagccggcccacagcagtgaacctgtctgat 377 |||||| |||| ||||| ||||||||||| ||||| || || ||||||||||| |||||| Sbjct: 287 gtttccgagaaattggagtaccttgtatcgagccgcccaactgcagtgaacctatctgat 346 Query: 378 gctgctacaaagcttcagaacttggtgtcaacaacagctgaaacagcaaaagatgccaaa 437 ||||| || ||||||| || || || |||| ||||| ||||| | |||||||||||| Sbjct: 347 gctgcaaccaagcttcggagtttagtttcaaggacagcagaaactgagaaagatgccaaa 406 Query: 438 tctatctttcaggtcttcattgaagctgcagagactatgctagttgatgatgtggctgat 497 | |||||||||| || |||||| || |||||||| ||||||||||| |||||| | ||| Sbjct: 407 gcaatctttcaggcctacattgatgcagcagagaccatgctagttgacgatgtgtcagat 466 Query: 498 aataaggcaattggtttgcatggagctgaattccttcaacggcagcttggaagt-tcaaa 556 || ||||||||||| | ||||||||||| || || ||| | | ||| || || || || Sbjct: 467 aacaaggcaattggctctcatggagctgagtttctcaaacagaaactt-gaggtctctaa 525 Query: 557 aaacatttctgttctaacccattgtaatactggcagccttgcaaccgctggttatggaac 616 | | |||||||||||||| || |||||||||||||| ||||| || |||||||||||||| Sbjct: 526 agatatttctgttctaacacactgtaatactggcagtcttgcgactgctggttatggaac 585 Query: 617 tgcccttggggttattcgtgctcttcactctggagg 652 |||| | ||||||||||||||||||||||||||||| Sbjct: 586 tgccttgggggttattcgtgctcttcactctggagg 621 Score = 125 bits (63), Expect = 2e-25 Identities = 155/184 (84%), Gaps = 2/184 (1%) Strand = Plus / Plus Query: 64 ccagnaatgggcgaatcgagcgcgcttcagtccatcctctacggccgcggcgcgctccgc 123 |||| ||||||||||| | | || || ||||||||| ||||| |||||| |||||||| Sbjct: 32 ccagcaatgggcgaattgggtgctctccagtccatcgtctaccaccgcggatcgctccgc 91 Query: 124 ctcctcgatcagaggaagctgcccctcgaggaggtctacgtcgacgtcaaggnactccgc 183 || || |||||||||||||| || ||||||| || |||| ||||||||||| ||||| Sbjct: 92 ctgcttgatcagaggaagctcccactcgaggtggactacatcgacgtcaagtg-ctccg- 149 Query: 184 ggnatggatggaatgcgatcagagacatggttgtccgtggtgctcctgccatagccatag 243 | |||||||||| || ||||||||||||||||||||||| |||||||| || ||||||| Sbjct: 150 gcgatggatggaacgcaatcagagacatggttgtccgtggcgctcctgcgattgccatag 209 Query: 244 cagc 247 |||| Sbjct: 210 cagc 213
>dbj|AK060549.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-H07, full insert sequence Length = 1391 Score = 214 bits (108), Expect = 3e-52 Identities = 281/336 (83%), Gaps = 2/336 (0%) Strand = Plus / Plus Query: 318 gtttccaagaagttggaataccttgtatccagccggcccacagcagtgaacctgtctgat 377 |||||| |||| ||||| ||||||||||| ||||| || || ||||||||||| |||||| Sbjct: 361 gtttccgagaaattggagtaccttgtatcgagccgcccaactgcagtgaacctatctgat 420 Query: 378 gctgctacaaagcttcagaacttggtgtcaacaacagctgaaacagcaaaagatgccaaa 437 ||||| || ||||||| || || || |||| ||||| ||||| | |||||||||||| Sbjct: 421 gctgcaaccaagcttcggagtttagtttcaaggacagcagaaactgagaaagatgccaaa 480 Query: 438 tctatctttcaggtcttcattgaagctgcagagactatgctagttgatgatgtggctgat 497 | |||||||||| || |||||| || |||||||| ||||||||||| |||||| | ||| Sbjct: 481 gcaatctttcaggcctacattgatgcagcagagaccatgctagttgacgatgtgtcagat 540 Query: 498 aataaggcaattggtttgcatggagctgaattccttcaacggcagcttggaagt-tcaaa 556 || ||||||||||| | ||||||||||| || || ||| | | ||| || || || || Sbjct: 541 aacaaggcaattggctctcatggagctgagtttctcaaacagaaactt-gaggtctctaa 599 Query: 557 aaacatttctgttctaacccattgtaatactggcagccttgcaaccgctggttatggaac 616 | | |||||||||||||| || |||||||||||||| ||||| || |||||||||||||| Sbjct: 600 agatatttctgttctaacacactgtaatactggcagtcttgcgactgctggttatggaac 659 Query: 617 tgcccttggggttattcgtgctcttcactctggagg 652 |||| | ||||||||||||||||||||||||||||| Sbjct: 660 tgccttgggggttattcgtgctcttcactctggagg 695 Score = 125 bits (63), Expect = 2e-25 Identities = 155/184 (84%), Gaps = 2/184 (1%) Strand = Plus / Plus Query: 64 ccagnaatgggcgaatcgagcgcgcttcagtccatcctctacggccgcggcgcgctccgc 123 |||| ||||||||||| | | || || ||||||||| ||||| |||||| |||||||| Sbjct: 106 ccagcaatgggcgaattgggtgctctccagtccatcgtctaccaccgcggatcgctccgc 165 Query: 124 ctcctcgatcagaggaagctgcccctcgaggaggtctacgtcgacgtcaaggnactccgc 183 || || |||||||||||||| || ||||||| || |||| ||||||||||| ||||| Sbjct: 166 ctgcttgatcagaggaagctcccactcgaggtggactacatcgacgtcaagtg-ctccg- 223 Query: 184 ggnatggatggaatgcgatcagagacatggttgtccgtggtgctcctgccatagccatag 243 | |||||||||| || ||||||||||||||||||||||| |||||||| || ||||||| Sbjct: 224 gcgatggatggaacgcaatcagagacatggttgtccgtggcgctcctgcgattgccatag 283 Query: 244 cagc 247 |||| Sbjct: 284 cagc 287
>dbj|AK060326.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-H10, full insert sequence Length = 1538 Score = 214 bits (108), Expect = 3e-52 Identities = 281/336 (83%), Gaps = 2/336 (0%) Strand = Plus / Plus Query: 318 gtttccaagaagttggaataccttgtatccagccggcccacagcagtgaacctgtctgat 377 |||||| |||| ||||| ||||||||||| ||||| || || ||||||||||| |||||| Sbjct: 349 gtttccgagaaattggagtaccttgtatcgagccgcccaactgcagtgaacctatctgat 408 Query: 378 gctgctacaaagcttcagaacttggtgtcaacaacagctgaaacagcaaaagatgccaaa 437 ||||| || ||||||| || || || |||| ||||| ||||| | |||||||||||| Sbjct: 409 gctgcaaccaagcttcggagtttagtttcaaggacagcagaaactgagaaagatgccaaa 468 Query: 438 tctatctttcaggtcttcattgaagctgcagagactatgctagttgatgatgtggctgat 497 | |||||||||| || |||||| || |||||||| ||||||||||| |||||| | ||| Sbjct: 469 gcaatctttcaggcctacattgatgcagcagagaccatgctagttgacgatgtgtcagat 528 Query: 498 aataaggcaattggtttgcatggagctgaattccttcaacggcagcttggaagt-tcaaa 556 || ||||||||||| | ||||||||||| || || ||| | | ||| || || || || Sbjct: 529 aacaaggcaattggctctcatggagctgagtttctcaaacagaaactt-gaggtctctaa 587 Query: 557 aaacatttctgttctaacccattgtaatactggcagccttgcaaccgctggttatggaac 616 | | |||||||||||||| || |||||||||||||| ||||| || |||||||||||||| Sbjct: 588 agatatttctgttctaacacactgtaatactggcagtcttgcgactgctggttatggaac 647 Query: 617 tgcccttggggttattcgtgctcttcactctggagg 652 |||| | ||||||||||||||||||||||||||||| Sbjct: 648 tgccttgggggttattcgtgctcttcactctggagg 683 Score = 125 bits (63), Expect = 2e-25 Identities = 155/184 (84%), Gaps = 2/184 (1%) Strand = Plus / Plus Query: 64 ccagnaatgggcgaatcgagcgcgcttcagtccatcctctacggccgcggcgcgctccgc 123 |||| ||||||||||| | | || || ||||||||| ||||| |||||| |||||||| Sbjct: 94 ccagcaatgggcgaattgggtgctctccagtccatcgtctaccaccgcggatcgctccgc 153 Query: 124 ctcctcgatcagaggaagctgcccctcgaggaggtctacgtcgacgtcaaggnactccgc 183 || || |||||||||||||| || ||||||| || |||| ||||||||||| ||||| Sbjct: 154 ctgcttgatcagaggaagctcccactcgaggtggactacatcgacgtcaagtg-ctccg- 211 Query: 184 ggnatggatggaatgcgatcagagacatggttgtccgtggtgctcctgccatagccatag 243 | |||||||||| || ||||||||||||||||||||||| |||||||| || ||||||| Sbjct: 212 gcgatggatggaacgcaatcagagacatggttgtccgtggcgctcctgcgattgccatag 271 Query: 244 cagc 247 |||| Sbjct: 272 cagc 275
>gb|AC123517.2| Oryza sativa japonica cultivar-group chromosome 11 clone OSJNBb0074K09, complete sequence Length = 135363 Score = 87.7 bits (44), Expect = 4e-14 Identities = 59/64 (92%) Strand = Plus / Plus Query: 589 gcagccttgcaaccgctggttatggaactgcccttggggttattcgtgctcttcactctg 648 |||| ||||| || |||||||||||||||||| | ||||||||||||||||||||||||| Sbjct: 82807 gcagtcttgcgactgctggttatggaactgccttgggggttattcgtgctcttcactctg 82866 Query: 649 gagg 652 |||| Sbjct: 82867 gagg 82870 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 201 atcagagacatggttgtccgtggtgctcctgccatagccatagcagc 247 ||||||||||||||||||||||| |||||||| || ||||||||||| Sbjct: 81616 atcagagacatggttgtccgtggcgctcctgcgattgccatagcagc 81662 Score = 63.9 bits (32), Expect = 6e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 455 cattgaagctgcagagactatgctagttgatgatgtggctgataataaggcaattggttt 514 |||||| || |||||||| ||||||||||| |||||| | ||||| ||||||||||| | Sbjct: 82569 cattgatgcagcagagaccatgctagttgacgatgtgtcagataacaaggcaattggctc 82628 Query: 515 gcatggagctga 526 ||||||||||| Sbjct: 82629 tcatggagctga 82640 Score = 58.0 bits (29), Expect = 4e-05 Identities = 86/105 (81%) Strand = Plus / Plus Query: 347 cagccggcccacagcagtgaacctgtctgatgctgctacaaagcttcagaacttggtgtc 406 |||||| || || ||||||||||| ||||||||||| || ||||||| || || || || Sbjct: 81870 cagccgcccaactgcagtgaacctatctgatgctgcaaccaagcttcggagtttagtttc 81929 Query: 407 aacaacagctgaaacagcaaaagatgccaaatctatctttcaggt 451 || ||||| ||||| | |||||||||||| | ||||||||||| Sbjct: 81930 aaggacagcagaaactgagaaagatgccaaagcaatctttcaggt 81974 Score = 44.1 bits (22), Expect = 0.57 Identities = 37/42 (88%) Strand = Plus / Plus Query: 133 cagaggaagctgcccctcgaggaggtctacgtcgacgtcaag 174 ||||||||||| || ||||||| || |||| ||||||||||| Sbjct: 81386 cagaggaagctcccactcgaggtggactacatcgacgtcaag 81427 Score = 42.1 bits (21), Expect = 2.3 Identities = 59/72 (81%) Strand = Plus / Plus Query: 64 ccagnaatgggcgaatcgagcgcgcttcagtccatcctctacggccgcggcgcgctccgc 123 |||| ||||||||||| | | || || ||||||||| ||||| |||||| |||||||| Sbjct: 81224 ccagcaatgggcgaattgggtgctctccagtccatcgtctaccaccgcggatcgctccgc 81283 Query: 124 ctcctcgatcag 135 || || |||||| Sbjct: 81284 ctgcttgatcag 81295
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 87.7 bits (44), Expect = 4e-14 Identities = 59/64 (92%) Strand = Plus / Plus Query: 589 gcagccttgcaaccgctggttatggaactgcccttggggttattcgtgctcttcactctg 648 |||| ||||| || |||||||||||||||||| | ||||||||||||||||||||||||| Sbjct: 6026724 gcagtcttgcgactgctggttatggaactgccttgggggttattcgtgctcttcactctg 6026783 Query: 649 gagg 652 |||| Sbjct: 6026784 gagg 6026787 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 201 atcagagacatggttgtccgtggtgctcctgccatagccatagcagc 247 ||||||||||||||||||||||| |||||||| || ||||||||||| Sbjct: 6025533 atcagagacatggttgtccgtggcgctcctgcgattgccatagcagc 6025579 Score = 63.9 bits (32), Expect = 6e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 455 cattgaagctgcagagactatgctagttgatgatgtggctgataataaggcaattggttt 514 |||||| || |||||||| ||||||||||| |||||| | ||||| ||||||||||| | Sbjct: 6026486 cattgatgcagcagagaccatgctagttgacgatgtgtcagataacaaggcaattggctc 6026545 Query: 515 gcatggagctga 526 ||||||||||| Sbjct: 6026546 tcatggagctga 6026557 Score = 58.0 bits (29), Expect = 4e-05 Identities = 86/105 (81%) Strand = Plus / Plus Query: 347 cagccggcccacagcagtgaacctgtctgatgctgctacaaagcttcagaacttggtgtc 406 |||||| || || ||||||||||| ||||||||||| || ||||||| || || || || Sbjct: 6025787 cagccgcccaactgcagtgaacctatctgatgctgcaaccaagcttcggagtttagtttc 6025846 Query: 407 aacaacagctgaaacagcaaaagatgccaaatctatctttcaggt 451 || ||||| ||||| | |||||||||||| | ||||||||||| Sbjct: 6025847 aaggacagcagaaactgagaaagatgccaaagcaatctttcaggt 6025891 Score = 44.1 bits (22), Expect = 0.57 Identities = 37/42 (88%) Strand = Plus / Plus Query: 133 cagaggaagctgcccctcgaggaggtctacgtcgacgtcaag 174 ||||||||||| || ||||||| || |||| ||||||||||| Sbjct: 6025303 cagaggaagctcccactcgaggtggactacatcgacgtcaag 6025344 Score = 42.1 bits (21), Expect = 2.3 Identities = 59/72 (81%) Strand = Plus / Plus Query: 64 ccagnaatgggcgaatcgagcgcgcttcagtccatcctctacggccgcggcgcgctccgc 123 |||| ||||||||||| | | || || ||||||||| ||||| |||||| |||||||| Sbjct: 6025141 ccagcaatgggcgaattgggtgctctccagtccatcgtctaccaccgcggatcgctccgc 6025200 Query: 124 ctcctcgatcag 135 || || |||||| Sbjct: 6025201 ctgcttgatcag 6025212
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 87.7 bits (44), Expect = 4e-14 Identities = 59/64 (92%) Strand = Plus / Plus Query: 589 gcagccttgcaaccgctggttatggaactgcccttggggttattcgtgctcttcactctg 648 |||| ||||| || |||||||||||||||||| | ||||||||||||||||||||||||| Sbjct: 6093201 gcagtcttgcgactgctggttatggaactgccttgggggttattcgtgctcttcactctg 6093260 Query: 649 gagg 652 |||| Sbjct: 6093261 gagg 6093264 Score = 69.9 bits (35), Expect = 1e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 201 atcagagacatggttgtccgtggtgctcctgccatagccatagcagc 247 ||||||||||||||||||||||| |||||||| || ||||||||||| Sbjct: 6092010 atcagagacatggttgtccgtggcgctcctgcgattgccatagcagc 6092056 Score = 63.9 bits (32), Expect = 6e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 455 cattgaagctgcagagactatgctagttgatgatgtggctgataataaggcaattggttt 514 |||||| || |||||||| ||||||||||| |||||| | ||||| ||||||||||| | Sbjct: 6092963 cattgatgcagcagagaccatgctagttgacgatgtgtcagataacaaggcaattggctc 6093022 Query: 515 gcatggagctga 526 ||||||||||| Sbjct: 6093023 tcatggagctga 6093034 Score = 58.0 bits (29), Expect = 4e-05 Identities = 86/105 (81%) Strand = Plus / Plus Query: 347 cagccggcccacagcagtgaacctgtctgatgctgctacaaagcttcagaacttggtgtc 406 |||||| || || ||||||||||| ||||||||||| || ||||||| || || || || Sbjct: 6092264 cagccgcccaactgcagtgaacctatctgatgctgcaaccaagcttcggagtttagtttc 6092323 Query: 407 aacaacagctgaaacagcaaaagatgccaaatctatctttcaggt 451 || ||||| ||||| | |||||||||||| | ||||||||||| Sbjct: 6092324 aaggacagcagaaactgagaaagatgccaaagcaatctttcaggt 6092368 Score = 44.1 bits (22), Expect = 0.57 Identities = 37/42 (88%) Strand = Plus / Plus Query: 133 cagaggaagctgcccctcgaggaggtctacgtcgacgtcaag 174 ||||||||||| || ||||||| || |||| ||||||||||| Sbjct: 6091780 cagaggaagctcccactcgaggtggactacatcgacgtcaag 6091821 Score = 42.1 bits (21), Expect = 2.3 Identities = 59/72 (81%) Strand = Plus / Plus Query: 64 ccagnaatgggcgaatcgagcgcgcttcagtccatcctctacggccgcggcgcgctccgc 123 |||| ||||||||||| | | || || ||||||||| ||||| |||||| |||||||| Sbjct: 6091618 ccagcaatgggcgaattgggtgctctccagtccatcgtctaccaccgcggatcgctccgc 6091677 Query: 124 ctcctcgatcag 135 || || |||||| Sbjct: 6091678 ctgcttgatcag 6091689
>ref|NM_001036262.1| Arabidopsis thaliana GTP binding / translation initiation factor AT2G05830 transcript variant AT2G05830.3 mRNA, complete cds Length = 1395 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 562 tttctgttctaacccattgtaatactggcagccttgcaaccgctggttatggaactgccc 621 |||||||| | |||||||| || |||||||||||||| ||||| || ||||| ||||||| Sbjct: 503 tttctgttttgacccattgcaacactggcagccttgctaccgccggatatggtactgccc 562 Query: 622 t 622 | Sbjct: 563 t 563 Score = 46.1 bits (23), Expect = 0.14 Identities = 53/63 (84%) Strand = Plus / Plus Query: 210 atggttgtccgtggtgctcctgccatagccatagcagcagcactatcattggctgtggaa 269 |||||||| |||||||||||||| ||||| || || || || || || |||||||| ||| Sbjct: 148 atggttgtacgtggtgctcctgctatagctattgctgctgctctttctttggctgttgaa 207 Query: 270 gtt 272 ||| Sbjct: 208 gtt 210
>ref|NM_201699.1| Arabidopsis thaliana GTP binding / translation initiation factor AT2G05830 transcript variant AT2G05830.2 mRNA, complete cds Length = 1530 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 562 tttctgttctaacccattgtaatactggcagccttgcaaccgctggttatggaactgccc 621 |||||||| | |||||||| || |||||||||||||| ||||| || ||||| ||||||| Sbjct: 638 tttctgttttgacccattgcaacactggcagccttgctaccgccggatatggtactgccc 697 Query: 622 t 622 | Sbjct: 698 t 698 Score = 46.1 bits (23), Expect = 0.14 Identities = 53/63 (84%) Strand = Plus / Plus Query: 210 atggttgtccgtggtgctcctgccatagccatagcagcagcactatcattggctgtggaa 269 |||||||| |||||||||||||| ||||| || || || || || || |||||||| ||| Sbjct: 283 atggttgtacgtggtgctcctgctatagctattgctgctgctctttctttggctgttgaa 342 Query: 270 gtt 272 ||| Sbjct: 343 gtt 345
>ref|NM_126596.2| Arabidopsis thaliana GTP binding / translation initiation factor AT2G05830 transcript variant AT2G05830.1 mRNA, complete cds Length = 1510 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 562 tttctgttctaacccattgtaatactggcagccttgcaaccgctggttatggaactgccc 621 |||||||| | |||||||| || |||||||||||||| ||||| || ||||| ||||||| Sbjct: 618 tttctgttttgacccattgcaacactggcagccttgctaccgccggatatggtactgccc 677 Query: 622 t 622 | Sbjct: 678 t 678 Score = 46.1 bits (23), Expect = 0.14 Identities = 53/63 (84%) Strand = Plus / Plus Query: 210 atggttgtccgtggtgctcctgccatagccatagcagcagcactatcattggctgtggaa 269 |||||||| |||||||||||||| ||||| || || || || || || |||||||| ||| Sbjct: 263 atggttgtacgtggtgctcctgctatagctattgctgctgctctttctttggctgttgaa 322 Query: 270 gtt 272 ||| Sbjct: 323 gtt 325
>gb|AY128839.1| Arabidopsis thaliana putative translation initiation factor eIF-2B alpha subunit (At2g05830) mRNA, complete cds Length = 1024 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 562 tttctgttctaacccattgtaatactggcagccttgcaaccgctggttatggaactgccc 621 |||||||| | |||||||| || |||||||||||||| ||||| || ||||| ||||||| Sbjct: 356 tttctgttttgacccattgcaacactggcagccttgctaccgccggatatggtactgccc 415 Query: 622 t 622 | Sbjct: 416 t 416 Score = 46.1 bits (23), Expect = 0.14 Identities = 53/63 (84%) Strand = Plus / Plus Query: 210 atggttgtccgtggtgctcctgccatagccatagcagcagcactatcattggctgtggaa 269 |||||||| |||||||||||||| ||||| || || || || || || |||||||| ||| Sbjct: 1 atggttgtacgtggtgctcctgctatagctattgctgctgctctttctttggctgttgaa 60 Query: 270 gtt 272 ||| Sbjct: 61 gtt 63
>gb|AY099595.1| Arabidopsis thaliana putative translation initiation factor eIF-2B alpha subunit (At2g05830) mRNA, complete cds Length = 1202 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 562 tttctgttctaacccattgtaatactggcagccttgcaaccgctggttatggaactgccc 621 |||||||| | |||||||| || |||||||||||||| ||||| || ||||| ||||||| Sbjct: 433 tttctgttttgacccattgcaacactggcagccttgctaccgccggatatggtactgccc 492 Query: 622 t 622 | Sbjct: 493 t 493 Score = 46.1 bits (23), Expect = 0.14 Identities = 53/63 (84%) Strand = Plus / Plus Query: 210 atggttgtccgtggtgctcctgccatagccatagcagcagcactatcattggctgtggaa 269 |||||||| |||||||||||||| ||||| || || || || || || |||||||| ||| Sbjct: 78 atggttgtacgtggtgctcctgctatagctattgctgctgctctttctttggctgttgaa 137 Query: 270 gtt 272 ||| Sbjct: 138 gtt 140
>emb|BX821142.1|CNS0AA41 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL19ZD03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1269 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 562 tttctgttctaacccattgtaatactggcagccttgcaaccgctggttatggaactgccc 621 |||||||| | |||||||| || |||||||||||||| ||||| || ||||| ||||||| Sbjct: 564 tttctgttttgacccattgcaacactggcagccttgctaccgccggatatggtactgccc 623 Query: 622 t 622 | Sbjct: 624 t 624 Score = 46.1 bits (23), Expect = 0.14 Identities = 53/63 (84%) Strand = Plus / Plus Query: 210 atggttgtccgtggtgctcctgccatagccatagcagcagcactatcattggctgtggaa 269 |||||||| |||||||||||||| ||||| || || || || || || |||||||| ||| Sbjct: 209 atggttgtacgtggtgctcctgctatagctattgctgctgctctttctttggctgttgaa 268 Query: 270 gtt 272 ||| Sbjct: 269 gtt 271
>emb|BX820919.1|CNS0A8MI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH81ZD12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1253 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 562 tttctgttctaacccattgtaatactggcagccttgcaaccgctggttatggaactgccc 621 |||||||| | |||||||| || |||||||||||||| ||||| || ||||| ||||||| Sbjct: 525 tttctgttttgacccattgcaacactggcagccttgctaccgccggatatggtactgccc 584 Query: 622 t 622 | Sbjct: 585 t 585 Score = 46.1 bits (23), Expect = 0.14 Identities = 53/63 (84%) Strand = Plus / Plus Query: 210 atggttgtccgtggtgctcctgccatagccatagcagcagcactatcattggctgtggaa 269 |||||||| |||||||||||||| ||||| || || || || || || |||||||| ||| Sbjct: 170 atggttgtacgtggtgctcctgctatagctattgctgctgctctttctttggctgttgaa 229 Query: 270 gtt 272 ||| Sbjct: 230 gtt 232
>emb|BX820068.1|CNS0A8IS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS70ZC05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1454 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 562 tttctgttctaacccattgtaatactggcagccttgcaaccgctggttatggaactgccc 621 |||||||| | |||||||| || |||||||||||||| ||||| || ||||| ||||||| Sbjct: 638 tttctgttttgacccattgcaacactggcagccttgctaccgccggatatggtactgccc 697 Query: 622 t 622 | Sbjct: 698 t 698 Score = 46.1 bits (23), Expect = 0.14 Identities = 53/63 (84%) Strand = Plus / Plus Query: 210 atggttgtccgtggtgctcctgccatagccatagcagcagcactatcattggctgtggaa 269 |||||||| |||||||||||||| ||||| || || || || || || |||||||| ||| Sbjct: 283 atggttgtacgtggtgctcctgctatagctattgctgctgctctttctttggctgttgaa 342 Query: 270 gtt 272 ||| Sbjct: 343 gtt 345
>emb|BX819922.1|CNS0A7WE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS4ZA07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1323 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 562 tttctgttctaacccattgtaatactggcagccttgcaaccgctggttatggaactgccc 621 |||||||| | |||||||| || |||||||||||||| ||||| || ||||| ||||||| Sbjct: 582 tttctgttttgacccattgcaacactggcagccttgctaccgccggatatggtactgccc 641 Query: 622 t 622 | Sbjct: 642 t 642 Score = 46.1 bits (23), Expect = 0.14 Identities = 53/63 (84%) Strand = Plus / Plus Query: 210 atggttgtccgtggtgctcctgccatagccatagcagcagcactatcattggctgtggaa 269 |||||||| |||||||||||||| ||||| || || || || || || |||||||| ||| Sbjct: 227 atggttgtacgtggtgctcctgctatagctattgctgctgctctttctttggctgttgaa 286 Query: 270 gtt 272 ||| Sbjct: 287 gtt 289
>gb|AY087601.1| Arabidopsis thaliana clone 36965 mRNA, complete sequence Length = 1386 Score = 54.0 bits (27), Expect = 6e-04 Identities = 52/61 (85%) Strand = Plus / Plus Query: 562 tttctgttctaacccattgtaatactggcagccttgcaaccgctggttatggaactgccc 621 |||||||| | |||||||| || | |||||||||||| ||||| || ||||| ||||||| Sbjct: 618 tttctgttttgacccattgcaacamtggcagccttgctaccgccggatatggtactgccc 677 Query: 622 t 622 | Sbjct: 678 t 678 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 210 atggttgtccgtggtgctcctgccatagc 238 |||||||| |||||||||||||| ||||| Sbjct: 263 atggttgtacgtggtgctcctgctatagc 291
>gb|AC005970.3| Arabidopsis thaliana chromosome 2 clone T6P5 map mi310, complete sequence Length = 121160 Score = 46.1 bits (23), Expect = 0.14 Identities = 53/63 (84%) Strand = Plus / Plus Query: 210 atggttgtccgtggtgctcctgccatagccatagcagcagcactatcattggctgtggaa 269 |||||||| |||||||||||||| ||||| || || || || || || |||||||| ||| Sbjct: 13970 atggttgtacgtggtgctcctgctatagctattgctgctgctctttctttggctgttgaa 14029 Query: 270 gtt 272 ||| Sbjct: 14030 gtt 14032
>ref|XM_392553.2| PREDICTED: Apis mellifera similar to CG11334-PB, isoform B (LOC409023), mRNA Length = 1586 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Plus Query: 571 taacccattgtaatactggcagccttgcaaccgctggttatgg 613 |||||||||| ||||| || ||||||||||| || |||||||| Sbjct: 668 taacccattgcaatacgggtagccttgcaacagcaggttatgg 710
>emb|BX821946.1|CNS0A8CG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL86ZG11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1261 Score = 46.1 bits (23), Expect = 0.14 Identities = 53/63 (84%) Strand = Plus / Plus Query: 210 atggttgtccgtggtgctcctgccatagccatagcagcagcactatcattggctgtggaa 269 |||||||| |||||||||||||| ||||| || || || || || || |||||||| ||| Sbjct: 177 atggttgtacgtggtgctcctgctatagctattgctgctgctctttctttggctgttgaa 236 Query: 270 gtt 272 ||| Sbjct: 237 gtt 239
>emb|BX820382.1|CNS0A8KT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH28ZC05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1687 Score = 46.1 bits (23), Expect = 0.14 Identities = 53/63 (84%) Strand = Plus / Plus Query: 210 atggttgtccgtggtgctcctgccatagccatagcagcagcactatcattggctgtggaa 269 |||||||| |||||||||||||| ||||| || || || || || || |||||||| ||| Sbjct: 259 atggttgtacgtggtgctcctgctatagctattgctgctgctctttctttggctgttgaa 318 Query: 270 gtt 272 ||| Sbjct: 319 gtt 321
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 102 ctacggccgcggcgcgctccgc 123 |||||||||||||||||||||| Sbjct: 1459266 ctacggccgcggcgcgctccgc 1459287
>emb|CR450793.12| Zebrafish DNA sequence from clone DKEY-48M5 in linkage group 10, complete sequence Length = 130542 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 392 tcagaacttggtgtcaacaaca 413 |||||||||||||||||||||| Sbjct: 79255 tcagaacttggtgtcaacaaca 79234
>emb|CR854933.8| Zebrafish DNA sequence from clone DKEY-48H17 in linkage group 14, complete sequence Length = 190712 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 392 tcagaacttggtgtcaacaaca 413 |||||||||||||||||||||| Sbjct: 115020 tcagaacttggtgtcaacaaca 115041
>emb|CR387983.8| Zebrafish DNA sequence from clone DKEY-90D6 in linkage group 21, complete sequence Length = 131428 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 392 tcagaacttggtgtcaacaaca 413 |||||||||||||||||||||| Sbjct: 99930 tcagaacttggtgtcaacaaca 99909
>emb|CR925821.12| Zebrafish DNA sequence from clone DKEY-27D1 in linkage group 14, complete sequence Length = 184616 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 392 tcagaacttggtgtcaacaaca 413 |||||||||||||||||||||| Sbjct: 206 tcagaacttggtgtcaacaaca 185
>emb|AL445066.1|TACID4 Thermoplasma acidophilum complete genome; segment 4/5 Length = 297750 Score = 44.1 bits (22), Expect = 0.57 Identities = 28/30 (93%) Strand = Plus / Minus Query: 208 acatggttgtccgtggtgctcctgccatag 237 ||||||||||| | |||||||||||||||| Sbjct: 282587 acatggttgtcaggggtgctcctgccatag 282558
>emb|BX005140.18| Zebrafish DNA sequence from clone CH211-11F22, complete sequence Length = 177312 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 392 tcagaacttggtgtcaacaaca 413 |||||||||||||||||||||| Sbjct: 53313 tcagaacttggtgtcaacaaca 53334
>gb|AF316325.1|AF316325 Rhodobacter sphaeroides porphobilinogen synthase (hemB) gene, complete cds; probable 3-hydroxyisobutyrate dehydrogenase gene, partial cds; and unknown gene Length = 2435 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 102 ctacggccgcggcgcgctccgc 123 |||||||||||||||||||||| Sbjct: 1691 ctacggccgcggcgcgctccgc 1712
>gb|AF311901.1|AF311901 Citrobacter rodentium strain DBS100 pathogenicity island LEE, complete sequence Length = 42001 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 416 tgaaacagcaaaagatgccaaa 437 |||||||||||||||||||||| Sbjct: 7872 tgaaacagcaaaagatgccaaa 7893
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 440 tatctttcaggtcttcattgaa 461 |||||||||||||||||||||| Sbjct: 5770666 tatctttcaggtcttcattgaa 5770645
>emb|BX548166.7| Zebrafish DNA sequence from clone CH211-280G5 in linkage group 10, complete sequence Length = 166449 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 392 tcagaacttggtgtcaacaaca 413 |||||||||||||||||||||| Sbjct: 53405 tcagaacttggtgtcaacaaca 53384
>emb|BX088530.6| Zebrafish DNA sequence from clone DKEY-56F11 in linkage group 10, complete sequence Length = 165564 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 392 tcagaacttggtgtcaacaaca 413 |||||||||||||||||||||| Sbjct: 69045 tcagaacttggtgtcaacaaca 69066
>emb|BX842669.10| Zebrafish DNA sequence from clone DKEY-222O17 in linkage group 20, complete sequence Length = 48580 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 392 tcagaacttggtgtcaacaaca 413 |||||||||||||||||||||| Sbjct: 44815 tcagaacttggtgtcaacaaca 44836
>emb|BX640593.8| Zebrafish DNA sequence from clone DKEY-183C16 in linkage group 4, complete sequence Length = 218192 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Plus Query: 392 tcagaacttggtgtcaacaaca 413 |||||||||||||||||||||| Sbjct: 86283 tcagaacttggtgtcaacaaca 86304
>emb|BX539307.6| Zebrafish DNA sequence from clone DKEY-253D23 in linkage group 22, complete sequence Length = 183551 Score = 44.1 bits (22), Expect = 0.57 Identities = 22/22 (100%) Strand = Plus / Minus Query: 392 tcagaacttggtgtcaacaaca 413 |||||||||||||||||||||| Sbjct: 47771 tcagaacttggtgtcaacaaca 47750
>ref|NM_018971.1| Homo sapiens G protein-coupled receptor 27 (GPR27), mRNA Length = 1128 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 106 ggccgcggcgcgctccgcctcctcg 130 ||||||||||||| ||||||||||| Sbjct: 790 ggccgcggcgcgcgccgcctcctcg 814
>ref|XM_380743.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00567.1) partial mRNA Length = 7884 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 618 gcccttggggttattcgtgct 638 ||||||||||||||||||||| Sbjct: 6955 gcccttggggttattcgtgct 6975
>emb|AL451084.19| Human DNA sequence from clone RP11-357H24 on chromosome 10 Contains the 3' end of the TCF7L2 gene for transcription factor 7-like 2 (T-cell specific, HMG-box), complete sequence Length = 183815 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 553 caaaaaacatttctgttctaaccca 577 ||||||||| ||||||||||||||| Sbjct: 26699 caaaaaacagttctgttctaaccca 26675
>gb|AY262402.1| Toxoplasma gondii clone A3 putative GPI-anchored surface BSR4-related antigen gene, complete cds Length = 1161 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 110 gcggcgcgctccgcctcctcg 130 ||||||||||||||||||||| Sbjct: 1063 gcggcgcgctccgcctcctcg 1083
>emb|BX572075.8| Zebrafish DNA sequence from clone CH211-158N13 in linkage group 12, complete sequence Length = 163859 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 240 atagcagcagcactatcattg 260 ||||||||||||||||||||| Sbjct: 27394 atagcagcagcactatcattg 27374
>gb|AC008540.6| Homo sapiens chromosome 19 clone CTC-496P20, complete sequence Length = 224931 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 270 gttaatgatcacaatttcatt 290 ||||||||||||||||||||| Sbjct: 172227 gttaatgatcacaatttcatt 172247
>gb|AC023699.4| Drosophila melanogaster X BAC RP98-11K20 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 177941 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 108 ccgcggcgcgctccgcctcctcgat 132 |||||||||| |||||||||||||| Sbjct: 79319 ccgcggcgcgttccgcctcctcgat 79343
>gb|AC117838.1| Caenorhabditis briggsae cosmid CB005E21, complete sequence Length = 109299 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 544 ttggaagttcaaaaaacattt 564 ||||||||||||||||||||| Sbjct: 13744 ttggaagttcaaaaaacattt 13724
>ref|NM_132107.2| Drosophila melanogaster CG3224-RA (CG3224), mRNA Length = 835 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 108 ccgcggcgcgctccgcctcctcgat 132 |||||||||| |||||||||||||| Sbjct: 528 ccgcggcgcgttccgcctcctcgat 504
>gb|AC096970.2| Homo sapiens chromosome 3 clone RP11-321A23, complete sequence Length = 171297 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 106 ggccgcggcgcgctccgcctcctcg 130 ||||||||||||| ||||||||||| Sbjct: 158456 ggccgcggcgcgcgccgcctcctcg 158432
>gb|AY071068.1| Drosophila melanogaster RE14402 full length cDNA Length = 853 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 108 ccgcggcgcgctccgcctcctcgat 132 |||||||||| |||||||||||||| Sbjct: 529 ccgcggcgcgttccgcctcctcgat 505
>ref|XM_627112.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd8_2080), partial mRNA Length = 1827 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 479 agttgatgatgtggctgataa 499 ||||||||||||||||||||| Sbjct: 812 agttgatgatgtggctgataa 792
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 cggcgcgctccgcctcctcga 131 ||||||||||||||||||||| Sbjct: 2017258 cggcgcgctccgcctcctcga 2017278
>emb|BX820889.1|CNS0AA7P Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH79ZD08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1410 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 210 atggttgtccgtggtgctcctgccatagc 238 |||||||| |||||||||||||| ||||| Sbjct: 269 atggttgtacgtggtgctcctgctatagc 297
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 109 cgcggcgcgctccgcctcctcgatc 133 |||||||||| |||||||||||||| Sbjct: 6869952 cgcggcgcgcgccgcctcctcgatc 6869976
>gb|AF188891.1|AF188891 Drosophila melanogaster strain Oregon R zinc finger protein gene, complete cds Length = 1963 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 108 ccgcggcgcgctccgcctcctcgat 132 |||||||||| |||||||||||||| Sbjct: 1546 ccgcggcgcgttccgcctcctcgat 1522
>emb|AL954138.8| Zebrafish DNA sequence from clone CH211-108D22, complete sequence Length = 183082 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 451 tcttcattgaagctgcagaga 471 ||||||||||||||||||||| Sbjct: 118011 tcttcattgaagctgcagaga 117991 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 451 tcttcattgaagctgcagaga 471 ||||||||||||||||||||| Sbjct: 115402 tcttcattgaagctgcagaga 115382 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 451 tcttcattgaagctgcagaga 471 ||||||||||||||||||||| Sbjct: 112789 tcttcattgaagctgcagaga 112769
>dbj|AP003526.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0548D03 Length = 156709 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 cggcgcgctccgcctcctcga 131 ||||||||||||||||||||| Sbjct: 146038 cggcgcgctccgcctcctcga 146058
>dbj|AP003708.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0041F13 Length = 163230 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 cggcgcgctccgcctcctcga 131 ||||||||||||||||||||| Sbjct: 38120 cggcgcgctccgcctcctcga 38140
>dbj|AK106455.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-103-F11, full insert sequence Length = 2411 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 cggcgcgctccgcctcctcga 131 ||||||||||||||||||||| Sbjct: 396 cggcgcgctccgcctcctcga 416
>dbj|AK073547.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033043A08, full insert sequence Length = 1434 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 cggcgcgctccgcctcctcga 131 ||||||||||||||||||||| Sbjct: 489 cggcgcgctccgcctcctcga 509
>emb|AM055943.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ib Length = 2013089 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 110 gcggcgcgctccgcctcctcg 130 ||||||||||||||||||||| Sbjct: 1817556 gcggcgcgctccgcctcctcg 1817536
>dbj|AK061097.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-A06, full insert sequence Length = 1574 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 cggcgcgctccgcctcctcga 131 ||||||||||||||||||||| Sbjct: 489 cggcgcgctccgcctcctcga 509
>gb|AE003438.3| Drosophila melanogaster chromosome X, section 22 of 74 of the complete sequence Length = 299943 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 108 ccgcggcgcgctccgcctcctcgat 132 |||||||||| |||||||||||||| Sbjct: 121206 ccgcggcgcgttccgcctcctcgat 121230
>emb|AL954699.4| Zebrafish DNA sequence from clone CH211-264H3 in linkage group 5, complete sequence Length = 143013 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 392 tcagaacttggtgtcaacaac 412 ||||||||||||||||||||| Sbjct: 21274 tcagaacttggtgtcaacaac 21254
>dbj|AB040799.1| Homo sapiens mRNA for SREB1, complete cds Length = 1128 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 106 ggccgcggcgcgctccgcctcctcg 130 ||||||||||||| ||||||||||| Sbjct: 790 ggccgcggcgcgcgccgcctcctcg 814
>ref|XM_634988.1| Dictyostelium discoideum putative alpha kinase (DDB0220109), partial mRNA Length = 2826 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 478 tagttgatgatgtggctgat 497 |||||||||||||||||||| Sbjct: 304 tagttgatgatgtggctgat 285
>ref|XM_471429.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1674 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 ctcgaggaggtctacgtcga 167 |||||||||||||||||||| Sbjct: 691 ctcgaggaggtctacgtcga 710
>gb|AC157574.6| Mus musculus BAC clone RP23-1G17 from chromosome 8, complete sequence Length = 216443 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 gtgctcctgccatagccata 242 |||||||||||||||||||| Sbjct: 58523 gtgctcctgccatagccata 58542
>ref|XM_359593.1| Magnaporthe grisea 70-15 hypothetical protein (MG05184.4) partial mRNA Length = 1389 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 gcgcgctccgcctcctcgat 132 |||||||||||||||||||| Sbjct: 845 gcgcgctccgcctcctcgat 826
>gb|AC103550.13| Oryza sativa chromosome 3 BAC OSJNBa0079G12 genomic sequence, complete sequence Length = 163712 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 107 gccgcggcgcgctccgcctcctcg 130 |||||||||||||||||| ||||| Sbjct: 113425 gccgcggcgcgctccgccgcctcg 113402
>ref|XM_955086.1| Neurospora crassa OR74A hypothetical protein (NCU09862.1) partial mRNA Length = 1026 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 cctcacttcctcctccgacc 39 |||||||||||||||||||| Sbjct: 342 cctcacttcctcctccgacc 361
>ref|XM_330783.1| Neurospora crassa OR74A hypothetical protein (NCU09862.1) partial mRNA Length = 1026 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 cctcacttcctcctccgacc 39 |||||||||||||||||||| Sbjct: 342 cctcacttcctcctccgacc 361
>gb|AC116130.15| Mus musculus chromosome 17, clone RP23-98F21, complete sequence Length = 228842 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 9 ctcccctgcttcctcacttcctcc 32 ||||||||||||||| |||||||| Sbjct: 45131 ctcccctgcttcctctcttcctcc 45154
>gb|AC132323.3| Mus musculus BAC clone RP24-268M17 from chromosome 9, complete sequence Length = 182469 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 443 ctttcaggtcttcattgaag 462 |||||||||||||||||||| Sbjct: 81673 ctttcaggtcttcattgaag 81692
>gb|AC186170.1| Ornithorhynchus anatinus chromosome UNK clone OABb-12B13, complete sequence Length = 134720 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 gcccctcccctgcttcctca 24 |||||||||||||||||||| Sbjct: 48262 gcccctcccctgcttcctca 48281
>gb|AC102135.12| Mus musculus chromosome 18, clone RP23-253J5, complete sequence Length = 204286 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 271 ttaatgatcacaatttcattggta 294 ||||||||| |||||||||||||| Sbjct: 16779 ttaatgatctcaatttcattggta 16802
>gb|AY600302.1| Homo sapiens origin recognition complex, subunit 4-like (yeast) (ORC4L) gene, complete cds Length = 90562 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 416 tgaaacagcaaaagatgccaaatc 439 ||||||| |||||||||||||||| Sbjct: 54914 tgaaacaacaaaagatgccaaatc 54891
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 107 gccgcggcgcgctccgcctcctcg 130 |||||||||||||||||| ||||| Sbjct: 29657952 gccgcggcgcgctccgccgcctcg 29657975
>emb|CR974567.10| Mouse DNA sequence from clone RP24-316L14 on chromosome 17, complete sequence Length = 188926 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 9 ctcccctgcttcctcacttcctcc 32 ||||||||||||||| |||||||| Sbjct: 102627 ctcccctgcttcctctcttcctcc 102604 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 9 ctcccctgcttcctcacttcctcc 32 ||||||||||||||| |||||||| Sbjct: 44670 ctcccctgcttcctctcttcctcc 44647
>gb|AC108830.13| Mus musculus chromosome 8, clone RP23-232G11, complete sequence Length = 200841 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 gtgctcctgccatagccata 242 |||||||||||||||||||| Sbjct: 5895 gtgctcctgccatagccata 5876
>ref|XM_811470.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053511827.40) partial mRNA Length = 1785 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 gcgcgctccgcctcctcgat 132 |||||||||||||||||||| Sbjct: 1730 gcgcgctccgcctcctcgat 1711
>gb|AC122182.4| Mus musculus BAC clone RP23-12G9 from 1, complete sequence Length = 197197 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 9 ctcccctgcttcctcacttcctcc 32 ||||||||||||||| |||||||| Sbjct: 97615 ctcccctgcttcctctcttcctcc 97592
>emb|CR712515.3|CNS0GCQ7 Tetraodon nigroviridis full-length cDNA Length = 1407 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 gcgctccgcctcctcgatca 134 |||||||||||||||||||| Sbjct: 967 gcgctccgcctcctcgatca 948
>emb|CR698027.1|CNS0G1JR Tetraodon nigroviridis full-length cDNA Length = 1546 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 gcgctccgcctcctcgatca 134 |||||||||||||||||||| Sbjct: 1019 gcgctccgcctcctcgatca 1000
>emb|CR680700.2|CNS0FO6G Tetraodon nigroviridis full-length cDNA Length = 1870 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 gcgctccgcctcctcgatca 134 |||||||||||||||||||| Sbjct: 1342 gcgctccgcctcctcgatca 1323
>emb|CR669994.2|CNS0FFXS Tetraodon nigroviridis full-length cDNA Length = 1848 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 gcgctccgcctcctcgatca 134 |||||||||||||||||||| Sbjct: 1320 gcgctccgcctcctcgatca 1301
>emb|CR666548.2|CNS0FDA2 Tetraodon nigroviridis full-length cDNA Length = 1874 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 gcgctccgcctcctcgatca 134 |||||||||||||||||||| Sbjct: 1346 gcgctccgcctcctcgatca 1327
>gb|BC061973.1| Rattus norvegicus cDNA clone IMAGE:5623185, **** WARNING: chimeric clone **** Length = 3175 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 ctgcttcctcacttcctcct 33 |||||||||||||||||||| Sbjct: 1876 ctgcttcctcacttcctcct 1857
>gb|AC105167.8| Mus musculus, clone RP23-286L9, complete sequence Length = 215113 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 9 ctcccctgcttcctcacttcctcc 32 ||||||||||||||| |||||||| Sbjct: 100568 ctcccctgcttcctctcttcctcc 100591
>emb|AL590410.13| Human DNA sequence from clone RP11-541G7 on chromosome X Contains the gene for APR-1 protein (MAGEH1), a novel gene, an ubiquitin specific protease 22 (USP22) pseudogene and a CpG island, complete sequence Length = 188615 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 cctgcttcctcacttcctcc 32 |||||||||||||||||||| Sbjct: 25225 cctgcttcctcacttcctcc 25206
>emb|AL138749.13| Human DNA sequence from clone RP11-289F5 on chromosome 9q21.31-22.1 Contains a novel gene, complete sequence Length = 186246 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 494 tgataataaggcaattggtt 513 |||||||||||||||||||| Sbjct: 101661 tgataataaggcaattggtt 101642
>emb|Z75271.1|SCYOR363C S.cerevisiae chromosome XV reading frame ORF YOR363c Length = 4624 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 cagcttggaagttcaaaaaa 559 |||||||||||||||||||| Sbjct: 871 cagcttggaagttcaaaaaa 852
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 105 cggccgcggcgcgctccgcc 124 |||||||||||||||||||| Sbjct: 2929707 cggccgcggcgcgctccgcc 2929688
>emb|AL663012.3|OSJN00217 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0069N01, complete sequence Length = 180264 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 ctcgaggaggtctacgtcga 167 |||||||||||||||||||| Sbjct: 164107 ctcgaggaggtctacgtcga 164088
>emb|AL078630.1|MM573K1 Mouse DNA sequence from clone CT7-BM573K1 on chromosome 17 Contains the gene for gamma-aminobutyric acid (GABA) B receptor 1, five genes for novel 7 transmembrane receptor (rhodopsin family) (olfactory receptor LIKE) proteins, the gene for a novel Ulp1 protease family member, a Ulp1 protease family pseudogene, a novel pseudogene, a Von Hippel-Lindau disease tumor suppressor (VHL) pseudogene, a 7 transmembrane receptor (rhodopsin family) (olfactory receptor LIKE) pseudogene, the gene for diubiquitin and three CpG islands, complete sequence Length = 154614 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 9 ctcccctgcttcctcacttcctcc 32 ||||||||||||||| |||||||| Sbjct: 122245 ctcccctgcttcctctcttcctcc 122222
>emb|AJ271361.2|FRU271361 Takifugu rubripes wnt2 (partial), frank1, cftr and frank2 (partial) genes Length = 60726 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 gcttcctcacttcctcctcc 35 |||||||||||||||||||| Sbjct: 4307 gcttcctcacttcctcctcc 4326
>gb|BC061977.1| Rattus norvegicus seminal vesicle protein, secretion 2, mRNA (cDNA clone MGC:72513 IMAGE:5623736), complete cds Length = 1545 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 ctgcttcctcacttcctcct 33 |||||||||||||||||||| Sbjct: 181 ctgcttcctcacttcctcct 162
>gb|AC158562.8| Mus musculus chromosome 8, clone RP24-275J2, complete sequence Length = 181144 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 372 tctgatgctgctacaaagcttcagaact 399 |||||||| ||||| ||||||||||||| Sbjct: 140742 tctgatgcagctactaagcttcagaact 140715
>gb|AC022909.13| Homo sapiens chromosome 8, clone RP11-682G1, complete sequence Length = 182241 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 241 tagcagcagcactatcattg 260 |||||||||||||||||||| Sbjct: 73012 tagcagcagcactatcattg 73031
>gb|DQ397548.1| Cenarchaeum symbiosum clone C04G08, complete sequence Length = 46706 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 139 aagctgcccctcgaggaggtctac 162 |||||||||| ||||||||||||| Sbjct: 8969 aagctgccccacgaggaggtctac 8946
>gb|AE005932.1| Caulobacter crescentus CB15 section 258 of 359 of the complete genome Length = 13291 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 gatcagagacatggttgtcc 219 |||||||||||||||||||| Sbjct: 9464 gatcagagacatggttgtcc 9445
>gb|AC023494.31| Homo sapiens 3 BAC RP11-59M4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 57963 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 480 gttgatgatgtggctgataa 499 |||||||||||||||||||| Sbjct: 9320 gttgatgatgtggctgataa 9339
>gb|AC005743.5| Mus musculus strain 129S6/SvEvTac chromosome 8c1 clone rp21-657p21, complete sequence Length = 185548 Score = 40.1 bits (20), Expect = 8.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 372 tctgatgctgctacaaagcttcagaact 399 |||||||| ||||| ||||||||||||| Sbjct: 69020 tctgatgcagctactaagcttcagaact 68993
>gb|AC091727.2|AC091727 Takifugu rubripes clone 250A8, complete sequence Length = 58366 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 gcttcctcacttcctcctcc 35 |||||||||||||||||||| Sbjct: 50394 gcttcctcacttcctcctcc 50413
>gb|AC090842.3| Homo sapiens chromosome 3 clone RP11-155E14 map 3p, complete sequence Length = 154922 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 460 aagctgcagagactatgcta 479 |||||||||||||||||||| Sbjct: 108773 aagctgcagagactatgcta 108792
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 ctcgaggaggtctacgtcga 167 |||||||||||||||||||| Sbjct: 10913634 ctcgaggaggtctacgtcga 10913615
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 gccatagccatagcagcagc 250 |||||||||||||||||||| Sbjct: 6235936 gccatagccatagcagcagc 6235955
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 107 gccgcggcgcgctccgcctcctcg 130 |||||||||||||||||| ||||| Sbjct: 29749374 gccgcggcgcgctccgccgcctcg 29749397
>emb|AL731618.3|OSJN00269 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0012A12, complete sequence Length = 122766 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 ctcgaggaggtctacgtcga 167 |||||||||||||||||||| Sbjct: 16699 ctcgaggaggtctacgtcga 16680
>gb|AC019226.5| Homo sapiens BAC clone RP11-567F11 from 2, complete sequence Length = 132444 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 416 tgaaacagcaaaagatgccaaatc 439 ||||||| |||||||||||||||| Sbjct: 119526 tgaaacaacaaaagatgccaaatc 119503
>ref|NM_012710.2| Rattus norvegicus seminal vesicle protein, secretion 2 (Svs2), mRNA Length = 1545 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 ctgcttcctcacttcctcct 33 |||||||||||||||||||| Sbjct: 181 ctgcttcctcacttcctcct 162
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 104 acggccgcggcgcgctccgc 123 |||||||||||||||||||| Sbjct: 2566307 acggccgcggcgcgctccgc 2566326
>gb|AC127684.5| Mus musculus BAC clone RP24-171J12 from chromosome 6, complete sequence Length = 178299 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 9 ctcccctgcttcctcacttcctcc 32 ||||||||||||||| |||||||| Sbjct: 115548 ctcccctgcttcctctcttcctcc 115571
>dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete genome Length = 3630528 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 481 ttgatgatgtggctgataataagg 504 ||||| |||||||||||||||||| Sbjct: 2547023 ttgatcatgtggctgataataagg 2547046
>dbj|AP005818.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0009H03 Length = 151685 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 gccatagccatagcagcagc 250 |||||||||||||||||||| Sbjct: 123836 gccatagccatagcagcagc 123855
>dbj|AP005562.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1190_B07 Length = 140200 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 gccatagccatagcagcagc 250 |||||||||||||||||||| Sbjct: 81219 gccatagccatagcagcagc 81238
>gb|AC119935.17| Mus musculus chromosome 15, clone RP24-261L5, complete sequence Length = 163746 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 cctgcttcctcacttcctcc 32 |||||||||||||||||||| Sbjct: 43414 cctgcttcctcacttcctcc 43433
>emb|BX088727.14| Zebrafish DNA sequence from clone DKEY-218A22 in linkage group 2, complete sequence Length = 185178 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 392 tcagaacttggtgtcaacaacagc 415 |||||| ||||||||||||||||| Sbjct: 56688 tcagaatttggtgtcaacaacagc 56711
>gb|AC157097.5| Mus musculus 6 BAC RP24-369M3 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 206335 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 tgtggaagttaatgatcaca 282 |||||||||||||||||||| Sbjct: 78472 tgtggaagttaatgatcaca 78491
>emb|BX120016.12| Zebrafish DNA sequence from clone CH211-232H16 in linkage group 2, complete sequence Length = 158139 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 394 agaacttggtgtcaacaaca 413 |||||||||||||||||||| Sbjct: 97914 agaacttggtgtcaacaaca 97895
>dbj|AK105543.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-H12, full insert sequence Length = 1391 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 107 gccgcggcgcgctccgcctcctcg 130 |||||||||||||||||| ||||| Sbjct: 855 gccgcggcgcgctccgccgcctcg 878
>emb|Z75270.1|SCYOR362C S.cerevisiae chromosome XV reading frame ORF YOR362c Length = 2569 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 540 cagcttggaagttcaaaaaa 559 |||||||||||||||||||| Sbjct: 1965 cagcttggaagttcaaaaaa 1946
>emb|AJ270774.1|HSA270774 Homo sapiens partial TCF-4 gene for T-cell transcription factor-4, exons 6-11 Length = 24413 Score = 40.1 bits (20), Expect = 8.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 553 caaaaaacatttctgttctaaccc 576 ||||||||| |||||||||||||| Sbjct: 20652 caaaaaacagttctgttctaaccc 20629
>gb|L36679.1|AMLUNA Amycolatopsis methanolica plasmid pMEA300 stf gene, complete cds Length = 13285 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 cgctccgcctcctcgatcag 135 |||||||||||||||||||| Sbjct: 8857 cgctccgcctcctcgatcag 8876
>gb|AC138221.23| Mus musculus chromosome 15, clone RP23-204C16, complete sequence Length = 239740 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 cctgcttcctcacttcctcc 32 |||||||||||||||||||| Sbjct: 7709 cctgcttcctcacttcctcc 7690
>gb|J05443.1|RATSVPIIA Rat seminal vesicle secretion II protein (SVS II) gene, complete cds Length = 4161 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 14 ctgcttcctcacttcctcct 33 |||||||||||||||||||| Sbjct: 2475 ctgcttcctcacttcctcct 2456
>dbj|AP005360.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1529G8, complete sequence Length = 147788 Score = 40.1 bits (20), Expect = 8.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 241 tagcagcagcactatcattg 260 |||||||||||||||||||| Sbjct: 7051 tagcagcagcactatcattg 7032 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,825,816 Number of Sequences: 3902068 Number of extensions: 5825816 Number of successful extensions: 116368 Number of sequences better than 10.0: 126 Number of HSP's better than 10.0 without gapping: 126 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 115392 Number of HSP's gapped (non-prelim): 963 length of query: 652 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 629 effective length of database: 17,143,297,704 effective search space: 10783134255816 effective search space used: 10783134255816 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
