| Clone Name | basd24h02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_464102.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3311 Score = 753 bits (380), Expect = 0.0 Identities = 512/556 (92%) Strand = Plus / Plus Query: 27 atgatgttaaggtggtcattttcaactttggaggacagccggcaggatggaaattgaaga 86 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 774 atgatgttaaggtggtcattttcaactttggaggacagcctgcaggatggaaactgaaga 833 Query: 87 aagagtggttgcctgatggttggctttgtttggtatgtggtgcatctgatactcaagagc 146 |||| ||| |||||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 834 aagaatggctgcctgatggttggctctgtttggtatgtggtgcatctgaaactcaagagc 893 Query: 147 ttcctccaaattatatcaagctcgcaaaggatgcgtacacacctgatttaatggcagcat 206 |||| ||||||| || || || |||||||| || || ||||||||||| |||||||||| Sbjct: 894 ttccaccaaatttcattaaacttgcaaaggacgcctatacacctgatttgatggcagcat 953 Query: 207 ctgactgcatgcttgggaaaattggatatggtaccgtgagtgaggctttggcatacaagc 266 ||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||| Sbjct: 954 ctgactgcatgcttgggaaaattggatatggcactgtgagtgaggctttggcttacaagc 1013 Query: 267 tgccatttgtatttgttcgtagagattatttcaatgaggagccttttttgcggaatatgc 326 ||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 1014 tgccatttgtatttgttcgtagagattatttcaatgaagagccgtttttgaggaatatgc 1073 Query: 327 ttgagcattatcaatgtggcattgagatgatacggagggatttacttactggacattgga 386 |||||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||| Sbjct: 1074 ttgagcattatcaatgtggcgttgagatggtacggagggatttacttactggacactgga 1133 Query: 387 aaccttatctgctacgtgctttaacacttaagccctgctatgatcgtccaataaacggtg 446 |||||||||||| ||||||| | |||||| | || ||||||||| |||||||||| |||| Sbjct: 1134 aaccttatctgcaacgtgctatgacacttcatccatgctatgatggtccaataaatggtg 1193 Query: 447 gcgaggtggctgcacatatcctccaggatactgctatcgggaagaagtatatttcaggca 506 | |||||||||||||||||||||||||| |||||| | || |||||||||||||| |||| Sbjct: 1194 gtgaggtggctgcacatatcctccaggacactgctgttggcaagaagtatatttctggca 1253 Query: 507 agttgagcggagcaagacgattacgtgatgccatagtgctaggataccaactacagaggg 566 ||||||||||||||||||| || ||||||||||||||||||||||| |||||||| |||| Sbjct: 1254 agttgagcggagcaagacgtttgcgtgatgccatagtgctaggatatcaactacaaaggg 1313 Query: 567 ctccggggagagatgt 582 |||| ||||||||||| Sbjct: 1314 ctccagggagagatgt 1329
>ref|XM_506716.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1123_E07.2 mRNA Length = 3765 Score = 753 bits (380), Expect = 0.0 Identities = 512/556 (92%) Strand = Plus / Plus Query: 27 atgatgttaaggtggtcattttcaactttggaggacagccggcaggatggaaattgaaga 86 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 769 atgatgttaaggtggtcattttcaactttggaggacagcctgcaggatggaaactgaaga 828 Query: 87 aagagtggttgcctgatggttggctttgtttggtatgtggtgcatctgatactcaagagc 146 |||| ||| |||||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 829 aagaatggctgcctgatggttggctctgtttggtatgtggtgcatctgaaactcaagagc 888 Query: 147 ttcctccaaattatatcaagctcgcaaaggatgcgtacacacctgatttaatggcagcat 206 |||| ||||||| || || || |||||||| || || ||||||||||| |||||||||| Sbjct: 889 ttccaccaaatttcattaaacttgcaaaggacgcctatacacctgatttgatggcagcat 948 Query: 207 ctgactgcatgcttgggaaaattggatatggtaccgtgagtgaggctttggcatacaagc 266 ||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||| Sbjct: 949 ctgactgcatgcttgggaaaattggatatggcactgtgagtgaggctttggcttacaagc 1008 Query: 267 tgccatttgtatttgttcgtagagattatttcaatgaggagccttttttgcggaatatgc 326 ||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 1009 tgccatttgtatttgttcgtagagattatttcaatgaagagccgtttttgaggaatatgc 1068 Query: 327 ttgagcattatcaatgtggcattgagatgatacggagggatttacttactggacattgga 386 |||||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||| Sbjct: 1069 ttgagcattatcaatgtggcgttgagatggtacggagggatttacttactggacactgga 1128 Query: 387 aaccttatctgctacgtgctttaacacttaagccctgctatgatcgtccaataaacggtg 446 |||||||||||| ||||||| | |||||| | || ||||||||| |||||||||| |||| Sbjct: 1129 aaccttatctgcaacgtgctatgacacttcatccatgctatgatggtccaataaatggtg 1188 Query: 447 gcgaggtggctgcacatatcctccaggatactgctatcgggaagaagtatatttcaggca 506 | |||||||||||||||||||||||||| |||||| | || |||||||||||||| |||| Sbjct: 1189 gtgaggtggctgcacatatcctccaggacactgctgttggcaagaagtatatttctggca 1248 Query: 507 agttgagcggagcaagacgattacgtgatgccatagtgctaggataccaactacagaggg 566 ||||||||||||||||||| || ||||||||||||||||||||||| |||||||| |||| Sbjct: 1249 agttgagcggagcaagacgtttgcgtgatgccatagtgctaggatatcaactacaaaggg 1308 Query: 567 ctccggggagagatgt 582 |||| ||||||||||| Sbjct: 1309 ctccagggagagatgt 1324
>dbj|AK067279.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013097O08, full insert sequence Length = 3764 Score = 753 bits (380), Expect = 0.0 Identities = 512/556 (92%) Strand = Plus / Plus Query: 27 atgatgttaaggtggtcattttcaactttggaggacagccggcaggatggaaattgaaga 86 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 768 atgatgttaaggtggtcattttcaactttggaggacagcctgcaggatggaaactgaaga 827 Query: 87 aagagtggttgcctgatggttggctttgtttggtatgtggtgcatctgatactcaagagc 146 |||| ||| |||||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 828 aagaatggctgcctgatggttggctctgtttggtatgtggtgcatctgaaactcaagagc 887 Query: 147 ttcctccaaattatatcaagctcgcaaaggatgcgtacacacctgatttaatggcagcat 206 |||| ||||||| || || || |||||||| || || ||||||||||| |||||||||| Sbjct: 888 ttccaccaaatttcattaaacttgcaaaggacgcctatacacctgatttgatggcagcat 947 Query: 207 ctgactgcatgcttgggaaaattggatatggtaccgtgagtgaggctttggcatacaagc 266 ||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||| Sbjct: 948 ctgactgcatgcttgggaaaattggatatggcactgtgagtgaggctttggcttacaagc 1007 Query: 267 tgccatttgtatttgttcgtagagattatttcaatgaggagccttttttgcggaatatgc 326 ||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 1008 tgccatttgtatttgttcgtagagattatttcaatgaagagccgtttttgaggaatatgc 1067 Query: 327 ttgagcattatcaatgtggcattgagatgatacggagggatttacttactggacattgga 386 |||||||||||||||||||| |||||||| ||||||||||||||||||||||||| |||| Sbjct: 1068 ttgagcattatcaatgtggcgttgagatggtacggagggatttacttactggacactgga 1127 Query: 387 aaccttatctgctacgtgctttaacacttaagccctgctatgatcgtccaataaacggtg 446 |||||||||||| ||||||| | |||||| | || ||||||||| |||||||||| |||| Sbjct: 1128 aaccttatctgcaacgtgctatgacacttcatccatgctatgatggtccaataaatggtg 1187 Query: 447 gcgaggtggctgcacatatcctccaggatactgctatcgggaagaagtatatttcaggca 506 | |||||||||||||||||||||||||| |||||| | || |||||||||||||| |||| Sbjct: 1188 gtgaggtggctgcacatatcctccaggacactgctgttggcaagaagtatatttctggca 1247 Query: 507 agttgagcggagcaagacgattacgtgatgccatagtgctaggataccaactacagaggg 566 ||||||||||||||||||| || ||||||||||||||||||||||| |||||||| |||| Sbjct: 1248 agttgagcggagcaagacgtttgcgtgatgccatagtgctaggatatcaactacaaaggg 1307 Query: 567 ctccggggagagatgt 582 |||| ||||||||||| Sbjct: 1308 ctccagggagagatgt 1323
>dbj|AK074020.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075P06, full insert sequence Length = 3312 Score = 745 bits (376), Expect = 0.0 Identities = 511/556 (91%) Strand = Plus / Plus Query: 27 atgatgttaaggtggtcattttcaactttggaggacagccggcaggatggaaattgaaga 86 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 775 atgatgttaaggtggtcattttcaactttggaggacagcctgcaggatggaaactgaaga 834 Query: 87 aagagtggttgcctgatggttggctttgtttggtatgtggtgcatctgatactcaagagc 146 |||| ||| |||||||||||||||| ||||||||||||||||||||||| |||||||||| Sbjct: 835 aagaatggctgcctgatggttggctctgtttggtatgtggtgcatctgaaactcaagagc 894 Query: 147 ttcctccaaattatatcaagctcgcaaaggatgcgtacacacctgatttaatggcagcat 206 |||| ||||||| || || || |||||||| || || ||||||||||| |||||||||| Sbjct: 895 ttccaccaaatttcattaaacttgcaaaggacgcctatacacctgatttgatggcagcat 954 Query: 207 ctgactgcatgcttgggaaaattggatatggtaccgtgagtgaggctttggcatacaagc 266 ||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||| Sbjct: 955 ctgactgcatgcttgggaaaattggatatggcactgtgagtgaggctttggcttacaagc 1014 Query: 267 tgccatttgtatttgttcgtagagattatttcaatgaggagccttttttgcggaatatgc 326 ||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||| Sbjct: 1015 tgccatttgtatttgttcgtagagattatttcaatgaagagccgtttttgaggaatatgc 1074 Query: 327 ttgagcattatcaatgtggcattgagatgatacggagggatttacttactggacattgga 386 |||||||||||||||||||| |||||||| |||||| |||||||||||||||||| |||| Sbjct: 1075 ttgagcattatcaatgtggcgttgagatggtacggaaggatttacttactggacactgga 1134 Query: 387 aaccttatctgctacgtgctttaacacttaagccctgctatgatcgtccaataaacggtg 446 |||||||||||| ||||||| | |||||| | || ||||||||| |||||||||| |||| Sbjct: 1135 aaccttatctgcaacgtgctatgacacttcatccatgctatgatggtccaataaatggtg 1194 Query: 447 gcgaggtggctgcacatatcctccaggatactgctatcgggaagaagtatatttcaggca 506 | |||||||||||||||||||||||||| |||||| | || |||||||||||||| |||| Sbjct: 1195 gtgaggtggctgcacatatcctccaggacactgctgttggcaagaagtatatttctggca 1254 Query: 507 agttgagcggagcaagacgattacgtgatgccatagtgctaggataccaactacagaggg 566 ||||||||||||||||||| || ||||||||||||||||||||||| |||||||| |||| Sbjct: 1255 agttgagcggagcaagacgtttgcgtgatgccatagtgctaggatatcaactacaaaggg 1314 Query: 567 ctccggggagagatgt 582 |||| ||||||||||| Sbjct: 1315 ctccagggagagatgt 1330
>dbj|AK072069.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013108L09, full insert sequence Length = 3647 Score = 345 bits (174), Expect = 1e-91 Identities = 456/550 (82%) Strand = Plus / Plus Query: 35 aaggtggtcattttcaactttggaggacagccggcaggatggaaattgaagaaagagtgg 94 |||||||| |||| || ||||| |||||||| ||||||||||| ||||| |||| ||| Sbjct: 750 aaggtggtggtttttaattttgggggacagccagcaggatggaacctgaagcaagaatgg 809 Query: 95 ttgcctgatggttggctttgtttggtatgtggtgcatctgatactcaagagcttcctcca 154 |||||||||| ||| | |||||||| || |||||||||||| |||||||| |||||||| Sbjct: 810 ctgcctgatggctggatctgtttggtctgcggtgcatctgattctcaagaggttcctcca 869 Query: 155 aattatatcaagctcgcaaaggatgcgtacacacctgatttaatggcagcatctgactgc 214 || | || ||||| ||||| ||||| |||||||||||| |||||||||||||||||| Sbjct: 870 aacttcattaagcttgcaaaagatgcttacacacctgatgctatggcagcatctgactgc 929 Query: 215 atgcttgggaaaattggatatggtaccgtgagtgaggctttggcatacaagctgccattt 274 ||||||||||||||||||||||| || | |||||||||||||| ||||||||||||||| Sbjct: 930 atgcttgggaaaattggatatggaactgcaagtgaggctttggcctacaagctgccattt 989 Query: 275 gtatttgttcgtagagattatttcaatgaggagccttttttgcggaatatgcttgagcat 334 | ||||| || ||||||||||| ||||| ||||| |||||||||||| | |||||||| Sbjct: 990 atctttgtccgcagagattattttaatgaagagccatttttgcggaatttacttgagcac 1049 Query: 335 tatcaatgtggcattgagatgatacggagggatttacttactggacattggaaaccttat 394 || || | | ||||| |||| | ||||| || ||| ||| || |||||||||||| Sbjct: 1050 taccagagcagtattgaaatgaccagaagggacttccttcatgggcactggaaaccttat 1109 Query: 395 ctgctacgtgctttaacacttaagccctgctatgatcgtccaataaacggtggcgaggtg 454 || || |||||| | |||||| | || ||||||||| |||||| ||| ||||| |||||| Sbjct: 1110 ctactccgtgctctcacacttcaaccatgctatgatggtccaacaaatggtggtgaggtg 1169 Query: 455 gctgcacatatcctccaggatactgctatcgggaagaagtatatttcaggcaagttgagc 514 ||||||| |||||| |||| |||||| | |||||||||| |||||| | ||| || | Sbjct: 1170 gctgcacgaatcctcgaggacactgctgttgggaagaagtgtatttctgacaaattcaat 1229 Query: 515 ggagcaagacgattacgtgatgccatagtgctaggataccaactacagagggctccgggg 574 |||||||||||||| | || ||||||||| |||| || ||| |||| |||||||| ||| Sbjct: 1230 ggagcaagacgattgcaagacgccatagtgttagggtatcaattacaaagggctccaggg 1289 Query: 575 agagatgtag 584 |||||||||| Sbjct: 1290 agagatgtag 1299
>dbj|AK067999.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129F06, full insert sequence Length = 3724 Score = 236 bits (119), Expect = 7e-59 Identities = 227/263 (86%) Strand = Plus / Plus Query: 69 caggatggaaattgaagaaagagtggttgcctgatggttggctttgtttggtatgtggtg 128 |||||||||| ||||| |||| ||| |||||||||| ||| | |||||||| || |||| Sbjct: 900 caggatggaacctgaagcaagaatggctgcctgatggctggatctgtttggtctgcggtg 959 Query: 129 catctgatactcaagagcttcctccaaattatatcaagctcgcaaaggatgcgtacacac 188 |||||||| |||||||| |||||||||| | || ||||| ||||| ||||| ||||||| Sbjct: 960 catctgattctcaagaggttcctccaaacttcattaagcttgcaaaagatgcttacacac 1019 Query: 189 ctgatttaatggcagcatctgactgcatgcttgggaaaattggatatggtaccgtgagtg 248 ||||| ||||||||||||||||||||||||||||||||||||||||| || | |||| Sbjct: 1020 ctgatgctatggcagcatctgactgcatgcttgggaaaattggatatggaactgcaagtg 1079 Query: 249 aggctttggcatacaagctgccatttgtatttgttcgtagagattatttcaatgaggagc 308 |||||||||| ||||||||||||||| | ||||| || ||||||||||| ||||| |||| Sbjct: 1080 aggctttggcctacaagctgccatttatctttgtccgcagagattattttaatgaagagc 1139 Query: 309 cttttttgcggaatatgcttgag 331 | |||||||||||| | |||||| Sbjct: 1140 catttttgcggaatttacttgag 1162 Score = 131 bits (66), Expect = 3e-27 Identities = 168/202 (83%) Strand = Plus / Plus Query: 383 tggaaaccttatctgctacgtgctttaacacttaagccctgctatgatcgtccaataaac 442 |||||||||||||| || |||||| | |||||| | || ||||||||| |||||| ||| Sbjct: 1205 tggaaaccttatctactccgtgctctcacacttcaaccatgctatgatggtccaacaaat 1264 Query: 443 ggtggcgaggtggctgcacatatcctccaggatactgctatcgggaagaagtatatttca 502 ||||| ||||||||||||| |||||| |||| |||||| | |||||||||| |||||| Sbjct: 1265 ggtggtgaggtggctgcacgaatcctcgaggacactgctgttgggaagaagtgtatttct 1324 Query: 503 ggcaagttgagcggagcaagacgattacgtgatgccatagtgctaggataccaactacag 562 | ||| || | |||||||||||||| | || ||||||||| |||| || ||| |||| Sbjct: 1325 gacaaattcaatggagcaagacgattgcaagacgccatagtgttagggtatcaattacaa 1384 Query: 563 agggctccggggagagatgtag 584 |||||||| ||||||||||||| Sbjct: 1385 agggctccagggagagatgtag 1406
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 172 bits (87), Expect = 8e-40 Identities = 105/111 (94%) Strand = Plus / Minus Query: 221 gggaaaattggatatggtaccgtgagtgaggctttggcatacaagctgccatttgtattt 280 ||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||||| Sbjct: 2236497 gggaaaattggatatggcactgtgagtgaggctttggcttacaagctgccatttgtattt 2236438 Query: 281 gttcgtagagattatttcaatgaggagccttttttgcggaatatgcttgag 331 ||||||||||||||||||||||| ||||| |||||| |||||||||||||| Sbjct: 2236437 gttcgtagagattatttcaatgaagagccgtttttgaggaatatgcttgag 2236387 Score = 151 bits (76), Expect = 3e-33 Identities = 112/124 (90%) Strand = Plus / Minus Query: 330 agcattatcaatgtggcattgagatgatacggagggatttacttactggacattggaaac 389 ||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||| Sbjct: 2236280 agcattatcaatgtggcgttgagatggtacggagggatttacttactggacactggaaac 2236221 Query: 390 cttatctgctacgtgctttaacacttaagccctgctatgatcgtccaataaacggtggcg 449 ||||||||| ||||||| | |||||| | || ||||||||| |||||||||| ||||| | Sbjct: 2236220 cttatctgcaacgtgctatgacacttcatccatgctatgatggtccaataaatggtggtg 2236161 Query: 450 aggt 453 |||| Sbjct: 2236160 aggt 2236157 Score = 121 bits (61), Expect = 3e-24 Identities = 94/105 (89%) Strand = Plus / Minus Query: 118 ggtatgtggtgcatctgatactcaagagcttcctccaaattatatcaagctcgcaaagga 177 |||||||||||||||||| |||||||||||||| ||||||| || || || |||||||| Sbjct: 2236690 ggtatgtggtgcatctgaaactcaagagcttccaccaaatttcattaaacttgcaaagga 2236631 Query: 178 tgcgtacacacctgatttaatggcagcatctgactgcatgcttgg 222 || || ||||||||||| |||||||||||||||||||||||||| Sbjct: 2236630 cgcctatacacctgatttgatggcagcatctgactgcatgcttgg 2236586 Score = 111 bits (56), Expect = 3e-21 Identities = 71/76 (93%) Strand = Plus / Minus Query: 507 agttgagcggagcaagacgattacgtgatgccatagtgctaggataccaactacagaggg 566 ||||||||||||||||||| || ||||||||||||||||||||||| |||||||| |||| Sbjct: 2235416 agttgagcggagcaagacgtttgcgtgatgccatagtgctaggatatcaactacaaaggg 2235357 Query: 567 ctccggggagagatgt 582 |||| ||||||||||| Sbjct: 2235356 ctccagggagagatgt 2235341 Score = 81.8 bits (41), Expect = 2e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 62 cagccggcaggatggaaattgaagaaagagtggttgcctgatggttggctttgtttggta 121 ||||| |||||||||||| |||||||||| ||| |||||||||||||||| ||||||||| Sbjct: 2236845 cagcctgcaggatggaaactgaagaaagaatggctgcctgatggttggctctgtttggta 2236786 Query: 122 t 122 | Sbjct: 2236785 t 2236785 Score = 79.8 bits (40), Expect = 9e-12 Identities = 58/64 (90%) Strand = Plus / Minus Query: 450 aggtggctgcacatatcctccaggatactgctatcgggaagaagtatatttcaggcaagt 509 ||||||||||||||||||||||||| |||||| | || |||||||||||||| |||||| Sbjct: 2235881 aggtggctgcacatatcctccaggacactgctgttggcaagaagtatatttctggcaagg 2235822 Query: 510 tgag 513 |||| Sbjct: 2235821 tgag 2235818 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Minus Query: 27 atgatgttaaggtggtcattttcaactttggaggacag 64 |||||||||||||||||||||||||||||||||||||| Sbjct: 2237143 atgatgttaaggtggtcattttcaactttggaggacag 2237106
>dbj|AP005721.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1123_E07 Length = 113187 Score = 172 bits (87), Expect = 8e-40 Identities = 105/111 (94%) Strand = Plus / Minus Query: 221 gggaaaattggatatggtaccgtgagtgaggctttggcatacaagctgccatttgtattt 280 ||||||||||||||||| || ||||||||||||||||| ||||||||||||||||||||| Sbjct: 23446 gggaaaattggatatggcactgtgagtgaggctttggcttacaagctgccatttgtattt 23387 Query: 281 gttcgtagagattatttcaatgaggagccttttttgcggaatatgcttgag 331 ||||||||||||||||||||||| ||||| |||||| |||||||||||||| Sbjct: 23386 gttcgtagagattatttcaatgaagagccgtttttgaggaatatgcttgag 23336 Score = 151 bits (76), Expect = 3e-33 Identities = 112/124 (90%) Strand = Plus / Minus Query: 330 agcattatcaatgtggcattgagatgatacggagggatttacttactggacattggaaac 389 ||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||| Sbjct: 23229 agcattatcaatgtggcgttgagatggtacggagggatttacttactggacactggaaac 23170 Query: 390 cttatctgctacgtgctttaacacttaagccctgctatgatcgtccaataaacggtggcg 449 ||||||||| ||||||| | |||||| | || ||||||||| |||||||||| ||||| | Sbjct: 23169 cttatctgcaacgtgctatgacacttcatccatgctatgatggtccaataaatggtggtg 23110 Query: 450 aggt 453 |||| Sbjct: 23109 aggt 23106 Score = 121 bits (61), Expect = 3e-24 Identities = 94/105 (89%) Strand = Plus / Minus Query: 118 ggtatgtggtgcatctgatactcaagagcttcctccaaattatatcaagctcgcaaagga 177 |||||||||||||||||| |||||||||||||| ||||||| || || || |||||||| Sbjct: 23639 ggtatgtggtgcatctgaaactcaagagcttccaccaaatttcattaaacttgcaaagga 23580 Query: 178 tgcgtacacacctgatttaatggcagcatctgactgcatgcttgg 222 || || ||||||||||| |||||||||||||||||||||||||| Sbjct: 23579 cgcctatacacctgatttgatggcagcatctgactgcatgcttgg 23535 Score = 111 bits (56), Expect = 3e-21 Identities = 71/76 (93%) Strand = Plus / Minus Query: 507 agttgagcggagcaagacgattacgtgatgccatagtgctaggataccaactacagaggg 566 ||||||||||||||||||| || ||||||||||||||||||||||| |||||||| |||| Sbjct: 22365 agttgagcggagcaagacgtttgcgtgatgccatagtgctaggatatcaactacaaaggg 22306 Query: 567 ctccggggagagatgt 582 |||| ||||||||||| Sbjct: 22305 ctccagggagagatgt 22290 Score = 81.8 bits (41), Expect = 2e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 62 cagccggcaggatggaaattgaagaaagagtggttgcctgatggttggctttgtttggta 121 ||||| |||||||||||| |||||||||| ||| |||||||||||||||| ||||||||| Sbjct: 23794 cagcctgcaggatggaaactgaagaaagaatggctgcctgatggttggctctgtttggta 23735 Query: 122 t 122 | Sbjct: 23734 t 23734 Score = 79.8 bits (40), Expect = 9e-12 Identities = 58/64 (90%) Strand = Plus / Minus Query: 450 aggtggctgcacatatcctccaggatactgctatcgggaagaagtatatttcaggcaagt 509 ||||||||||||||||||||||||| |||||| | || |||||||||||||| |||||| Sbjct: 22830 aggtggctgcacatatcctccaggacactgctgttggcaagaagtatatttctggcaagg 22771 Query: 510 tgag 513 |||| Sbjct: 22770 tgag 22767 Score = 75.8 bits (38), Expect = 1e-10 Identities = 38/38 (100%) Strand = Plus / Minus Query: 27 atgatgttaaggtggtcattttcaactttggaggacag 64 |||||||||||||||||||||||||||||||||||||| Sbjct: 24092 atgatgttaaggtggtcattttcaactttggaggacag 24055
>ref|NM_117706.2| Arabidopsis thaliana ARA1 (ARABINOSE SENSITIVE 1); ATP binding / galactokinase AT4G16130 (ARA1) mRNA, complete cds Length = 3410 Score = 149 bits (75), Expect = 1e-32 Identities = 207/251 (82%) Strand = Plus / Plus Query: 107 tggctttgtttggtatgtggtgcatctgatactcaagagcttcctccaaattatatcaag 166 ||||| ||| |||| ||||| |||||||| || | |||||||| ||||||| ||| ||| Sbjct: 900 tggctgtgtctggtttgtggcgcatctgagaccctggagcttccaccaaattttataaag 959 Query: 167 ctcgcaaaggatgcgtacacacctgatttaatggcagcatctgactgcatgcttgggaaa 226 || || |||||||| || || |||||| | || || ||||||||||| |||||||||||| Sbjct: 960 cttgctaaggatgcttatacgcctgatattatagcggcatctgactgtatgcttgggaaa 1019 Query: 227 attggatatggtaccgtgagtgaggctttggcatacaagctgccatttgtatttgttcgt 286 ||||| ||||| || || ||||| || | | |||||| |||| ||||| ||||| || Sbjct: 1020 attggttatggcactgtcagtgaagccctatcctacaaggtgccgtttgtctttgtacgc 1079 Query: 287 agagattatttcaatgaggagccttttttgcggaatatgcttgagcattatcaatgtggc 346 |||||||||||||||||||| |||||| || | |||||||||||| |||||||||||| Sbjct: 1080 agagattatttcaatgaggaaccttttctgagaaatatgcttgagttttatcaatgtggt 1139 Query: 347 attgagatgat 357 |||||||||| Sbjct: 1140 gttgagatgat 1150
>gb|BT003908.1| Arabidopsis thaliana clone RAFL15-15-P11 (R20658) At4g16130 mRNA, complete sequence Length = 3392 Score = 149 bits (75), Expect = 1e-32 Identities = 207/251 (82%) Strand = Plus / Plus Query: 107 tggctttgtttggtatgtggtgcatctgatactcaagagcttcctccaaattatatcaag 166 ||||| ||| |||| ||||| |||||||| || | |||||||| ||||||| ||| ||| Sbjct: 898 tggctgtgtctggtttgtggcgcatctgagaccctggagcttccaccaaattttataaag 957 Query: 167 ctcgcaaaggatgcgtacacacctgatttaatggcagcatctgactgcatgcttgggaaa 226 || || |||||||| || || |||||| | || || ||||||||||| |||||||||||| Sbjct: 958 cttgctaaggatgcttatacgcctgatattatagcggcatctgactgtatgcttgggaaa 1017 Query: 227 attggatatggtaccgtgagtgaggctttggcatacaagctgccatttgtatttgttcgt 286 ||||| ||||| || || ||||| || | | |||||| |||| ||||| ||||| || Sbjct: 1018 attggttatggcactgtcagtgaagccctatcctacaaggtgccgtttgtctttgtacgc 1077 Query: 287 agagattatttcaatgaggagccttttttgcggaatatgcttgagcattatcaatgtggc 346 |||||||||||||||||||| |||||| || | |||||||||||| |||||||||||| Sbjct: 1078 agagattatttcaatgaggaaccttttctgagaaatatgcttgagttttatcaatgtggt 1137 Query: 347 attgagatgat 357 |||||||||| Sbjct: 1138 gttgagatgat 1148
>emb|Y14404.1|ATY14404 Arabidopsis thaliana ISA1 gene Length = 3352 Score = 149 bits (75), Expect = 1e-32 Identities = 207/251 (82%) Strand = Plus / Plus Query: 107 tggctttgtttggtatgtggtgcatctgatactcaagagcttcctccaaattatatcaag 166 ||||| ||| |||| ||||| |||||||| || | |||||||| ||||||| ||| ||| Sbjct: 870 tggctgtgtctggtttgtggcgcatctgagaccctggagcttccaccaaattttataaag 929 Query: 167 ctcgcaaaggatgcgtacacacctgatttaatggcagcatctgactgcatgcttgggaaa 226 || || |||||||| || || |||||| | || || ||||||||||| |||||||||||| Sbjct: 930 cttgctaaggatgcttatacgcctgatattatagcggcatctgactgtatgcttgggaaa 989 Query: 227 attggatatggtaccgtgagtgaggctttggcatacaagctgccatttgtatttgttcgt 286 ||||| ||||| || || ||||| || | | |||||| |||| ||||| ||||| || Sbjct: 990 attggttatggcactgtcagtgaagccctatcctacaaggtgccgtttgtctttgtacgc 1049 Query: 287 agagattatttcaatgaggagccttttttgcggaatatgcttgagcattatcaatgtggc 346 |||||||||||||||||||| |||||| || | |||||||||||| |||||||||||| Sbjct: 1050 agagattatttcaatgaggaaccttttctgagaaatatgcttgagttttatcaatgtggt 1109 Query: 347 attgagatgat 357 |||||||||| Sbjct: 1110 gttgagatgat 1120
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 109 bits (55), Expect = 1e-20 Identities = 97/111 (87%) Strand = Plus / Plus Query: 221 gggaaaattggatatggtaccgtgagtgaggctttggcatacaagctgccatttgtattt 280 ||||||||||||||||| || | |||||||||||||| ||||||||||||||| | ||| Sbjct: 29112735 gggaaaattggatatggaactgcaagtgaggctttggcctacaagctgccatttatcttt 29112794 Query: 281 gttcgtagagattatttcaatgaggagccttttttgcggaatatgcttgag 331 || || ||||||||||| ||||| ||||| |||||||||||| | |||||| Sbjct: 29112795 gtccgcagagattattttaatgaagagccatttttgcggaatttacttgag 29112845 Score = 101 bits (51), Expect = 3e-18 Identities = 90/103 (87%) Strand = Plus / Plus Query: 125 ggtgcatctgatactcaagagcttcctccaaattatatcaagctcgcaaaggatgcgtac 184 |||||||||||| |||||||| |||||||||| | || ||||| ||||| ||||| ||| Sbjct: 29112555 ggtgcatctgattctcaagaggttcctccaaacttcattaagcttgcaaaagatgcttac 29112614 Query: 185 acacctgatttaatggcagcatctgactgcatgcttgggaaaa 227 ||||||||| |||||||||||||||||||||||||| |||| Sbjct: 29112615 acacctgatgctatggcagcatctgactgcatgcttggtaaaa 29112657 Score = 60.0 bits (30), Expect = 9e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 515 ggagcaagacgattacgtgatgccatagtgctaggataccaactacagagggctccgggg 574 |||||||||||||| | || ||||||||| |||| || ||| |||| |||||||| ||| Sbjct: 29113652 ggagcaagacgattgcaagacgccatagtgttagggtatcaattacaaagggctccaggg 29113711 Query: 575 agagatgtag 584 |||||||||| Sbjct: 29113712 agagatgtag 29113721 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 383 tggaaaccttatctgctacgtgctttaacacttaagccctgctatgatcgtccaataaac 442 |||||||||||||| || |||||| | |||||| | || ||||||||| |||||| ||| Sbjct: 29112985 tggaaaccttatctactccgtgctctcacacttcaaccatgctatgatggtccaacaaat 29113044 Query: 443 ggtggcgaggt 453 ||||| ||||| Sbjct: 29113045 ggtggtgaggt 29113055 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/61 (85%) Strand = Plus / Plus Query: 62 cagccggcaggatggaaattgaagaaagagtggttgcctgatggttggctttgtttggta 121 ||||| ||||||||||| ||||| |||| ||| |||||||||| ||| | ||||||||| Sbjct: 29112400 cagccagcaggatggaacctgaagcaagaatggctgcctgatggctggatctgtttggta 29112459 Query: 122 t 122 | Sbjct: 29112460 t 29112460 Score = 48.1 bits (24), Expect = 0.033 Identities = 45/52 (86%) Strand = Plus / Plus Query: 450 aggtggctgcacatatcctccaggatactgctatcgggaagaagtatatttc 501 |||||||||||| |||||| |||| |||||| | |||||||||| |||||| Sbjct: 29113298 aggtggctgcacgaatcctcgaggacactgctgttgggaagaagtgtatttc 29113349
>dbj|AP003726.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0596H10 Length = 166570 Score = 109 bits (55), Expect = 1e-20 Identities = 97/111 (87%) Strand = Plus / Plus Query: 221 gggaaaattggatatggtaccgtgagtgaggctttggcatacaagctgccatttgtattt 280 ||||||||||||||||| || | |||||||||||||| ||||||||||||||| | ||| Sbjct: 127722 gggaaaattggatatggaactgcaagtgaggctttggcctacaagctgccatttatcttt 127781 Query: 281 gttcgtagagattatttcaatgaggagccttttttgcggaatatgcttgag 331 || || ||||||||||| ||||| ||||| |||||||||||| | |||||| Sbjct: 127782 gtccgcagagattattttaatgaagagccatttttgcggaatttacttgag 127832 Score = 101 bits (51), Expect = 3e-18 Identities = 90/103 (87%) Strand = Plus / Plus Query: 125 ggtgcatctgatactcaagagcttcctccaaattatatcaagctcgcaaaggatgcgtac 184 |||||||||||| |||||||| |||||||||| | || ||||| ||||| ||||| ||| Sbjct: 127542 ggtgcatctgattctcaagaggttcctccaaacttcattaagcttgcaaaagatgcttac 127601 Query: 185 acacctgatttaatggcagcatctgactgcatgcttgggaaaa 227 ||||||||| |||||||||||||||||||||||||| |||| Sbjct: 127602 acacctgatgctatggcagcatctgactgcatgcttggtaaaa 127644 Score = 60.0 bits (30), Expect = 9e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 515 ggagcaagacgattacgtgatgccatagtgctaggataccaactacagagggctccgggg 574 |||||||||||||| | || ||||||||| |||| || ||| |||| |||||||| ||| Sbjct: 128639 ggagcaagacgattgcaagacgccatagtgttagggtatcaattacaaagggctccaggg 128698 Query: 575 agagatgtag 584 |||||||||| Sbjct: 128699 agagatgtag 128708 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 383 tggaaaccttatctgctacgtgctttaacacttaagccctgctatgatcgtccaataaac 442 |||||||||||||| || |||||| | |||||| | || ||||||||| |||||| ||| Sbjct: 127972 tggaaaccttatctactccgtgctctcacacttcaaccatgctatgatggtccaacaaat 128031 Query: 443 ggtggcgaggt 453 ||||| ||||| Sbjct: 128032 ggtggtgaggt 128042 Score = 50.1 bits (25), Expect = 0.008 Identities = 52/61 (85%) Strand = Plus / Plus Query: 62 cagccggcaggatggaaattgaagaaagagtggttgcctgatggttggctttgtttggta 121 ||||| ||||||||||| ||||| |||| ||| |||||||||| ||| | ||||||||| Sbjct: 127387 cagccagcaggatggaacctgaagcaagaatggctgcctgatggctggatctgtttggta 127446 Query: 122 t 122 | Sbjct: 127447 t 127447 Score = 48.1 bits (24), Expect = 0.033 Identities = 45/52 (86%) Strand = Plus / Plus Query: 450 aggtggctgcacatatcctccaggatactgctatcgggaagaagtatatttc 501 |||||||||||| |||||| |||| |||||| | |||||||||| |||||| Sbjct: 128285 aggtggctgcacgaatcctcgaggacactgctgttgggaagaagtgtatttc 128336
>emb|Z97340.2|ATFCA5 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 5 Length = 209164 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Plus Query: 260 tacaagctgccatttgtatttgttcgtagagattatttcaatgaggagccttttttgcgg 319 |||||| |||| ||||| ||||| || |||||||||||||||||||| |||||| || | Sbjct: 89743 tacaaggtgccgtttgtctttgtacgcagagattatttcaatgaggaaccttttctgaga 89802 Query: 320 aatatgcttgag 331 |||||||||||| Sbjct: 89803 aatatgcttgag 89814 Score = 58.0 bits (29), Expect = 3e-05 Identities = 83/101 (82%) Strand = Plus / Plus Query: 122 tgtggtgcatctgatactcaagagcttcctccaaattatatcaagctcgcaaaggatgcg 181 ||||| |||||||| || | |||||||| ||||||| ||| ||||| || |||||||| Sbjct: 89526 tgtggcgcatctgagaccctggagcttccaccaaattttataaagcttgctaaggatgct 89585 Query: 182 tacacacctgatttaatggcagcatctgactgcatgcttgg 222 || || |||||| | || || ||||||||||| |||||||| Sbjct: 89586 tatacgcctgatattatagcggcatctgactgtatgcttgg 89626
>emb|AL161543.2|ATCHRIV43 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 43 Length = 198226 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Plus Query: 260 tacaagctgccatttgtatttgttcgtagagattatttcaatgaggagccttttttgcgg 319 |||||| |||| ||||| ||||| || |||||||||||||||||||| |||||| || | Sbjct: 58733 tacaaggtgccgtttgtctttgtacgcagagattatttcaatgaggaaccttttctgaga 58792 Query: 320 aatatgcttgag 331 |||||||||||| Sbjct: 58793 aatatgcttgag 58804 Score = 58.0 bits (29), Expect = 3e-05 Identities = 83/101 (82%) Strand = Plus / Plus Query: 122 tgtggtgcatctgatactcaagagcttcctccaaattatatcaagctcgcaaaggatgcg 181 ||||| |||||||| || | |||||||| ||||||| ||| ||||| || |||||||| Sbjct: 58516 tgtggcgcatctgagaccctggagcttccaccaaattttataaagcttgctaaggatgct 58575 Query: 182 tacacacctgatttaatggcagcatctgactgcatgcttgg 222 || || |||||| | || || ||||||||||| |||||||| Sbjct: 58576 tatacgcctgatattatagcggcatctgactgtatgcttgg 58616
>emb|Y14403.1|ATY14403 Arabidopsis thaliana SEB1, ISA1 genes Length = 13973 Score = 71.9 bits (36), Expect = 2e-09 Identities = 63/72 (87%) Strand = Plus / Plus Query: 260 tacaagctgccatttgtatttgttcgtagagattatttcaatgaggagccttttttgcgg 319 |||||| |||| ||||| ||||| || |||||||||||||||||||| |||||| || | Sbjct: 8600 tacaaggtgccgtttgtctttgtacgcagagattatttcaatgaggaaccttttctgaga 8659 Query: 320 aatatgcttgag 331 |||||||||||| Sbjct: 8660 aatatgcttgag 8671 Score = 58.0 bits (29), Expect = 3e-05 Identities = 83/101 (82%) Strand = Plus / Plus Query: 122 tgtggtgcatctgatactcaagagcttcctccaaattatatcaagctcgcaaaggatgcg 181 ||||| |||||||| || | |||||||| ||||||| ||| ||||| || |||||||| Sbjct: 8383 tgtggcgcatctgagaccctggagcttccaccaaattttataaagcttgctaaggatgct 8442 Query: 182 tacacacctgatttaatggcagcatctgactgcatgcttgg 222 || || |||||| | || || ||||||||||| |||||||| Sbjct: 8443 tatacgcctgatattatagcggcatctgactgtatgcttgg 8483
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 69.9 bits (35), Expect = 9e-09 Identities = 83/99 (83%) Strand = Plus / Minus Query: 222 ggaaaattggatatggtaccgtgagtgaggctttggcatacaagctgccatttgtatttg 281 |||||||||||||||| || | |||||||||||||| | |||||||| ||| | |||| Sbjct: 7375987 ggaaaattggatatggaactgcaagtgaggctttggcctgcaagctgcagtttatttttg 7375928 Query: 282 ttcgtagagattatttcaatgaggagccttttttgcgga 320 | || ||||||||||| ||||| ||||| || ||||||| Sbjct: 7375927 tccgcagagattattttaatgaagagccattcttgcgga 7375889
>gb|AC136136.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0071C04, from chromosome 3, complete sequence Length = 126078 Score = 69.9 bits (35), Expect = 9e-09 Identities = 83/99 (83%) Strand = Plus / Minus Query: 222 ggaaaattggatatggtaccgtgagtgaggctttggcatacaagctgccatttgtatttg 281 |||||||||||||||| || | |||||||||||||| | |||||||| ||| | |||| Sbjct: 14542 ggaaaattggatatggaactgcaagtgaggctttggcctgcaagctgcagtttatttttg 14483 Query: 282 ttcgtagagattatttcaatgaggagccttttttgcgga 320 | || ||||||||||| ||||| ||||| || ||||||| Sbjct: 14482 tccgcagagattattttaatgaagagccattcttgcgga 14444
>gb|AC118981.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0060E18, from chromosome 3, complete sequence Length = 147983 Score = 69.9 bits (35), Expect = 9e-09 Identities = 83/99 (83%) Strand = Plus / Minus Query: 222 ggaaaattggatatggtaccgtgagtgaggctttggcatacaagctgccatttgtatttg 281 |||||||||||||||| || | |||||||||||||| | |||||||| ||| | |||| Sbjct: 127177 ggaaaattggatatggaactgcaagtgaggctttggcctgcaagctgcagtttatttttg 127118 Query: 282 ttcgtagagattatttcaatgaggagccttttttgcgga 320 | || ||||||||||| ||||| ||||| || ||||||| Sbjct: 127117 tccgcagagattattttaatgaagagccattcttgcgga 127079
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 69.9 bits (35), Expect = 9e-09 Identities = 83/99 (83%) Strand = Plus / Minus Query: 222 ggaaaattggatatggtaccgtgagtgaggctttggcatacaagctgccatttgtatttg 281 |||||||||||||||| || | |||||||||||||| | |||||||| ||| | |||| Sbjct: 7373816 ggaaaattggatatggaactgcaagtgaggctttggcctgcaagctgcagtttatttttg 7373757 Query: 282 ttcgtagagattatttcaatgaggagccttttttgcgga 320 | || ||||||||||| ||||| ||||| || ||||||| Sbjct: 7373756 tccgcagagattattttaatgaagagccattcttgcgga 7373718
>ref|NM_114153.1| Arabidopsis thaliana ATP binding / galactokinase/ kinase/ phosphotransferase, alcohol group as acceptor AT3G42850 mRNA, complete cds Length = 2895 Score = 50.1 bits (25), Expect = 0.008 Identities = 37/41 (90%) Strand = Plus / Plus Query: 209 gactgcatgcttgggaaaattggatatggtaccgtgagtga 249 ||||||||||| || |||||||||||||| || |||||||| Sbjct: 838 gactgcatgctcggaaaaattggatatggaactgtgagtga 878
>gb|AY146588.1| Triticum monococcum BAC clone 453N11, complete sequence Length = 285444 Score = 42.1 bits (21), Expect = 2.0 Identities = 40/44 (90%), Gaps = 2/44 (4%) Strand = Plus / Minus Query: 6 aaggaactagggnattgcagnatgatgttaaggtggtcattttc 49 ||||||||||| ||||||| ||||||||| ||||||||||||| Sbjct: 255372 aaggaactagg-tattgcag-atgatgttacggtggtcattttc 255331
>gb|AC127697.3| Mus musculus chromosome 15 clone RP24-83I10, complete sequence Length = 205653 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 70 aggatggaaattgaagaaaga 90 ||||||||||||||||||||| Sbjct: 193812 aggatggaaattgaagaaaga 193832
>gb|AC122900.3| Mus musculus BAC clone RP23-39N24 from 15, complete sequence Length = 203855 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 70 aggatggaaattgaagaaaga 90 ||||||||||||||||||||| Sbjct: 169788 aggatggaaattgaagaaaga 169768
>gb|AE016827.1| Mannheimia succiniciproducens MBEL55E, complete genome Length = 2314078 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 ttaaggtggtcattttcaac 52 |||||||||||||||||||| Sbjct: 800199 ttaaggtggtcattttcaac 800218
>gb|DQ145546.1| Sinorhizobium meliloti plasmid pSmeSM11a, complete sequence Length = 144170 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 tatatcaagctcgcaaagga 177 |||||||||||||||||||| Sbjct: 29965 tatatcaagctcgcaaagga 29984
>emb|Z99105.2|BSUB0002 Bacillus subtilis complete genome (section 2 of 21): from 213031 to 415798 Length = 202768 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 tgcggaatatgcttgagcat 334 |||||||||||||||||||| Sbjct: 8550 tgcggaatatgcttgagcat 8569
>gb|AF451898.1| Heliothis zea virus 1, complete genome Length = 228089 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 117 tggtatgtggtgcatctgat 136 |||||||||||||||||||| Sbjct: 21562 tggtatgtggtgcatctgat 21581
>gb|AC154795.2| Mus musculus BAC clone RP24-486D21 from chromosome 14, complete sequence Length = 153985 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 ttatcaatgtggcattgaga 353 |||||||||||||||||||| Sbjct: 144943 ttatcaatgtggcattgaga 144924
>gb|AC154433.2| Mus musculus BAC clone RP24-182L23 from chromosome 14, complete sequence Length = 166650 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 334 ttatcaatgtggcattgaga 353 |||||||||||||||||||| Sbjct: 24922 ttatcaatgtggcattgaga 24903
>dbj|AB006424.1| Bacillus subtilis genomic DNA, 70 kb region between 17 and 23 degree Length = 69650 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 tgcggaatatgcttgagcat 334 |||||||||||||||||||| Sbjct: 24582 tgcggaatatgcttgagcat 24601 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,695,808 Number of Sequences: 3902068 Number of extensions: 4695808 Number of successful extensions: 79597 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 30 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 79408 Number of HSP's gapped (non-prelim): 187 length of query: 584 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 561 effective length of database: 17,143,297,704 effective search space: 9617390011944 effective search space used: 9617390011944 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)