ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd24g01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_195178.1| Oryza sativa (japonica cultivar-group) putative... 392 e-106
2dbj|AK066480.1| Oryza sativa (japonica cultivar-group) cDNA clon... 392 e-106
3dbj|AK070212.1| Oryza sativa (japonica cultivar-group) cDNA clon... 254 3e-64
4gb|AC092173.3| Oryza sativa (japonica cultivar-group) chromosome... 121 3e-24
5dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 121 3e-24
6gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 121 3e-24
7gb|AE007290.1| Sinorhizobium meliloti 1021 plasmid pSymA section... 44 0.53
8gb|AC152456.1| Pan troglodytes chromosome X clone PTB-055J03 map... 42 2.1
9gb|AC186394.1| Pan troglodytes chromosome 7 clone CH251-302F10, ... 42 2.1
10ref|NM_013252.2| Homo sapiens C-type lectin domain family 5, mem... 42 2.1
11gb|AC073647.9| Homo sapiens BAC clone RP11-707F14 from 7, comple... 42 2.1
12gb|AC124586.3| Mus musculus BAC clone RP23-132E20 from 12, compl... 42 2.1
13ref|XM_766287.1| Giardia lamblia ATCC 50803 MAP kinase (GLP_28_1... 42 2.1
14ref|XM_666009.1| Plasmodium berghei strain ANKA hypothetical pro... 42 2.1
15emb|AL022577.1|HS353H6 Human DNA sequence from clone RP3-353H6 o... 42 2.1
16emb|AJ271684.1|HSA271684 Homo sapiens mRNA for myeloid DAP12-ass... 42 2.1
17gb|AF411809.1| Lycopersicon esculentum BAC clone FW2.2, complete... 42 2.1
18gb|AC114482.2| Homo sapiens chromosome 1 clone RP11-484D4, compl... 42 2.1
19gb|AC009265.10| Homo sapiens, clone RP11-45B18, complete sequence 42 2.1
20dbj|AP008934.1| Staphylococcus saprophyticus subsp. saprophyticu... 42 2.1
21ref|XM_397101.2| PREDICTED: Apis mellifera similar to CG32344-PA... 42 2.1
22dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
23dbj|AP002883.2| Oryza sativa (japonica cultivar-group) genomic D... 42 2.1
24gb|AC145388.2| Oryza sativa chromosome 3 BAC OSJNBb0036M02 genom... 40 8.3
25gb|AC147913.2| Xenopus tropicalis clone CH216-83K3, complete seq... 40 8.3
26gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 8.3
27gb|AC182749.2| Mus musculus BAC clone RP23-464D14 from chromosom... 40 8.3
28gb|AC074257.5| Homo sapiens BAC clone RP11-796I2 from 7, complet... 40 8.3
29emb|AJ245806.2|ETE245806 Echinops telfairi complete mitochondria... 40 8.3
30gb|AC091170.15| Homo sapiens chromosome 18, clone RP11-879D5, co... 40 8.3
31gb|AC093583.3| Homo sapiens BAC clone RP13-452N2 from 7, complet... 40 8.3
32gb|AC100847.2| Homo sapiens chromosome 18, clone RP11-706P11, co... 40 8.3
33gb|AC005013.3| Homo sapiens BAC clone GS1-165L15 from 7, complet... 40 8.3
34emb|AL929357.1|PFA929357 Plasmodium falciparum strain 3D7, chrom... 40 8.3
35emb|AL596125.27| Mouse DNA sequence from clone RP23-5O23 on chro... 40 8.3
36emb|AL596086.9| Mouse DNA sequence from clone RP23-168C20 on chr... 40 8.3
37emb|AJ400734.2|ETE400734 Echinops telfairi complete mitochondria... 40 8.3
38gb|AC163892.2| Glomus intraradices clone JGIATSX-5O23, complete ... 40 8.3
39gb|AC011291.8| Homo sapiens BAC clone RP11-67G7 from 2, complete... 40 8.3
40gb|AC104988.4| Homo sapiens chromosome 18, clone RP11-732E23, co... 40 8.3
41gb|AC019193.7| Homo sapiens BAC clone RP11-335L23 from 4, comple... 40 8.3
42gb|AC011359.5|AC011359 Homo sapiens chromosome 5 clone CTC-370H2... 40 8.3
43dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
44gb|AC068723.5|AC068723 Homo sapiens chromosome 15 clone RP11-126... 40 8.3
45gb|AC009503.3| Homo sapiens BAC clone RP11-516K23 from 2, comple... 40 8.3
46gb|AY011136.1| Echinops telfairi 16S ribosomal RNA gene, partial... 40 8.3
47gb|AC025272.6|AC025272 Homo sapiens chromosome 15 clone RP11-548... 40 8.3
48gb|AC093528.3| Homo sapiens chromosome 5 clone RP11-297K24, comp... 40 8.3
49gb|AC127496.5| Homo sapiens chromosome 17, clone CTD-2561B21, co... 40 8.3
50gb|AC133208.3| Mus musculus BAC clone RP23-17O6 from chromosome ... 40 8.3
51gb|AC140472.3| Mus musculus BAC clone RP24-403L12 from chromosom... 40 8.3
52dbj|AB099484.1| Echinops telfairi mitochondrial DNA, complete ge... 40 8.3
53emb|BX649595.7| Zebrafish DNA sequence from clone RP71-81O21, co... 40 8.3
54emb|AJ699306.2| Photobacterium damselae subsp. piscicida siderop... 40 8.3
55emb|BX119956.8| Mouse DNA sequence from clone RP23-301K15 on chr... 40 8.3
56gb|AF069540.1|AF069540 Echinops telfairi 12S ribosomal RNA gene,... 40 8.3
57emb|AL928981.7| Mouse DNA sequence from clone RP23-54O14 on chro... 40 8.3
58gb|AC173477.2| Mus musculus BAC clone RP24-344P5 from chromosome... 40 8.3
59gb|AC100778.5| Homo sapiens chromosome 18, clone RP11-110H1, com... 40 8.3 
>ref|NM_195178.1| Oryza sativa (japonica cultivar-group) putative crp1 protein
            (OSJNBa0095J15.5), mRNA
          Length = 3270

 Score =  392 bits (198), Expect = e-106
 Identities = 506/609 (83%)
 Strand = Plus / Plus

                                                                        
Query: 1    agcaagggnatttcatgttggaatcatggcatacagttcctgtatgggtgcttgctgcaa 60
            ||||| || || ||| ||||||| ||| ||||||||||| |  |||||||||||||||||
Sbjct: 2118 agcaaagggatatcaagttggaaccattgcatacagttcattaatgggtgcttgctgcaa 2177

                                                                        
Query: 61   tgccaaggactggaaaaaggcgctgcagctatttgaggagatcaaggctatcaaattaat 120
            |||||||||||||||||||||  ||||||||||||||||||||||| | |||||||||||
Sbjct: 2178 tgccaaggactggaaaaaggcattgcagctatttgaggagatcaagtcaatcaaattaat 2237

                                                                        
Query: 121  tccaacagttccgatgatgaatgctttaatcacttccctctgtgacaacgatcaagttat 180
             ||||| ||| | |||||||||||| | |||||  |  | |||||    ||||||||| |
Sbjct: 2238 gccaaccgtttcaatgatgaatgctctgatcaccgcattgtgtgatggtgatcaagtttt 2297

                                                                        
Query: 181  aaaatctgctgaggtccttaatgagataagggaactaggtgtccgtccaaatgagataac 240
             || |||  ||||||||||| |||||| | |  | |||| ||| ||||||||  ||||||
Sbjct: 2298 gaagtcttttgaggtccttagtgagatgaagagattaggagtctgtccaaatatgataac 2357

                                                                        
Query: 241  ctattctgtcttatgtgtggcttgcgaaagaaatggtgaagcacaactagctctggattt 300
            |||||| || |||| ||||||||| ||||| |||| |||||||||||| | | ||||| |
Sbjct: 2358 ctattcggtgttatttgtggcttgtgaaaggaatgctgaagcacaactgggtttggatct 2417

                                                                        
Query: 301  atttgagcaactaaaagtagatggtattggcctcaatcccaccattgtcggttgtcttac 360
            |||||| ||| ||||| ||||  |||||| |||||||||||| || || |||||||||||
Sbjct: 2418 atttgaacaattaaaaatagacagtattgacctcaatcccacaatcgttggttgtcttac 2477

                                                                        
Query: 361  tggtttatgtctacaaatgttttcgtgtgatctttcacttggcaacatcattgtcagatt 420
            ||| || ||||||||||||||      |||||||||||| ||||| ||| |||||| |||
Sbjct: 2478 tggcttgtgtctacaaatgttcgacaatgatctttcactgggcaatatcgttgtcacatt 2537

                                                                        
Query: 421  caaccaagggaagccacagattgacaataaatggacttcctcagcaattatggttttccg 480
            ||||  |||||| ||||||||||| || |||||||| ||||||||||||| ||| | |||
Sbjct: 2538 caacttagggaaaccacagattgagaacaaatggacctcctcagcaattaaggtctaccg 2597

                                                                        
Query: 481  tcaggcaatcaccgctggtctgctaccctcaagcgatgttttatctcaagtgctgggatg 540
            | |||||||  || | || ||  |||||||||| |||||||| ||||||||| |||||||
Sbjct: 2598 tgaggcaatttccacaggactattaccctcaagtgatgttttgtctcaagtgttgggatg 2657

                                                                        
Query: 541  tttgaggtttcctcatgacagttcattgaaaaacactttcatttataatatgggaataag 600
            ||| |||||||||||||| | | |||| | ||| ||||||||| | ||||||||||||||
Sbjct: 2658 tttaaggtttcctcatgataatacattaacaaatactttcattgaaaatatgggaataag 2717

                     
Query: 601  ttgtgatat 609
            |||||||||
Sbjct: 2718 ttgtgatat 2726
to top
>dbj|AK066480.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013070G23, full
            insert sequence
          Length = 3361

 Score =  392 bits (198), Expect = e-106
 Identities = 506/609 (83%)
 Strand = Plus / Plus

                                                                        
Query: 1    agcaagggnatttcatgttggaatcatggcatacagttcctgtatgggtgcttgctgcaa 60
            ||||| || || ||| ||||||| ||| ||||||||||| |  |||||||||||||||||
Sbjct: 1915 agcaaagggatatcaagttggaaccattgcatacagttcattaatgggtgcttgctgcaa 1974

                                                                        
Query: 61   tgccaaggactggaaaaaggcgctgcagctatttgaggagatcaaggctatcaaattaat 120
            |||||||||||||||||||||  ||||||||||||||||||||||| | |||||||||||
Sbjct: 1975 tgccaaggactggaaaaaggcattgcagctatttgaggagatcaagtcaatcaaattaat 2034

                                                                        
Query: 121  tccaacagttccgatgatgaatgctttaatcacttccctctgtgacaacgatcaagttat 180
             ||||| ||| | |||||||||||| | |||||  |  | |||||    ||||||||| |
Sbjct: 2035 gccaaccgtttcaatgatgaatgctctgatcaccgcattgtgtgatggtgatcaagtttt 2094

                                                                        
Query: 181  aaaatctgctgaggtccttaatgagataagggaactaggtgtccgtccaaatgagataac 240
             || |||  ||||||||||| |||||| | |  | |||| ||| ||||||||  ||||||
Sbjct: 2095 gaagtcttttgaggtccttagtgagatgaagagattaggagtctgtccaaatatgataac 2154

                                                                        
Query: 241  ctattctgtcttatgtgtggcttgcgaaagaaatggtgaagcacaactagctctggattt 300
            |||||| || |||| ||||||||| ||||| |||| |||||||||||| | | ||||| |
Sbjct: 2155 ctattcggtgttatttgtggcttgtgaaaggaatgctgaagcacaactgggtttggatct 2214

                                                                        
Query: 301  atttgagcaactaaaagtagatggtattggcctcaatcccaccattgtcggttgtcttac 360
            |||||| ||| ||||| ||||  |||||| |||||||||||| || || |||||||||||
Sbjct: 2215 atttgaacaattaaaaatagacagtattgacctcaatcccacaatcgttggttgtcttac 2274

                                                                        
Query: 361  tggtttatgtctacaaatgttttcgtgtgatctttcacttggcaacatcattgtcagatt 420
            ||| || ||||||||||||||      |||||||||||| ||||| ||| |||||| |||
Sbjct: 2275 tggcttgtgtctacaaatgttcgacaatgatctttcactgggcaatatcgttgtcacatt 2334

                                                                        
Query: 421  caaccaagggaagccacagattgacaataaatggacttcctcagcaattatggttttccg 480
            ||||  |||||| ||||||||||| || |||||||| ||||||||||||| ||| | |||
Sbjct: 2335 caacttagggaaaccacagattgagaacaaatggacctcctcagcaattaaggtctaccg 2394

                                                                        
Query: 481  tcaggcaatcaccgctggtctgctaccctcaagcgatgttttatctcaagtgctgggatg 540
            | |||||||  || | || ||  |||||||||| |||||||| ||||||||| |||||||
Sbjct: 2395 tgaggcaatttccacaggactattaccctcaagtgatgttttgtctcaagtgttgggatg 2454

                                                                        
Query: 541  tttgaggtttcctcatgacagttcattgaaaaacactttcatttataatatgggaataag 600
            ||| |||||||||||||| | | |||| | ||| ||||||||| | ||||||||||||||
Sbjct: 2455 tttaaggtttcctcatgataatacattaacaaatactttcattgaaaatatgggaataag 2514

                     
Query: 601  ttgtgatat 609
            |||||||||
Sbjct: 2515 ttgtgatat 2523
to top
>dbj|AK070212.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023044F01, full
           insert sequence
          Length = 3260

 Score =  254 bits (128), Expect = 3e-64
 Identities = 308/368 (83%)
 Strand = Plus / Plus

                                                                       
Query: 242 tattctgtcttatgtgtggcttgcgaaagaaatggtgaagcacaactagctctggattta 301
           ||||| || |||| ||||||||| ||||| |||| |||||||||||| | | ||||| ||
Sbjct: 2   tattcggtgttatttgtggcttgtgaaaggaatgctgaagcacaactgggtttggatcta 61

                                                                       
Query: 302 tttgagcaactaaaagtagatggtattggcctcaatcccaccattgtcggttgtcttact 361
           ||||| ||| ||||| ||||  |||||| |||||||||||| || || ||||||||||||
Sbjct: 62  tttgaacaattaaaaatagacagtattgacctcaatcccacaatcgttggttgtcttact 121

                                                                       
Query: 362 ggtttatgtctacaaatgttttcgtgtgatctttcacttggcaacatcattgtcagattc 421
           || || ||||||||||||||      |||||||||||| ||||| ||| |||||| ||||
Sbjct: 122 ggcttgtgtctacaaatgttcgacaatgatctttcactgggcaatatcgttgtcacattc 181

                                                                       
Query: 422 aaccaagggaagccacagattgacaataaatggacttcctcagcaattatggttttccgt 481
           |||  |||||| ||||||||||| || |||||||| ||||||||||||| ||| | ||||
Sbjct: 182 aacttagggaaaccacagattgagaacaaatggacctcctcagcaattaaggtctaccgt 241

                                                                       
Query: 482 caggcaatcaccgctggtctgctaccctcaagcgatgttttatctcaagtgctgggatgt 541
            |||||||  || | || ||  |||||||||| |||||||| ||||||||| ||||||||
Sbjct: 242 gaggcaatttccacaggactattaccctcaagtgatgttttgtctcaagtgttgggatgt 301

                                                                       
Query: 542 ttgaggtttcctcatgacagttcattgaaaaacactttcatttataatatgggaataagt 601
           || |||||||||||||| | | |||| | ||| ||||||||| | |||||||||||||||
Sbjct: 302 ttaaggtttcctcatgataatacattaacaaatactttcattgaaaatatgggaataagt 361

                   
Query: 602 tgtgatat 609
           ||||||||
Sbjct: 362 tgtgatat 369
to top
>gb|AC092173.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0095J15,
              complete sequence
          Length = 156023

 Score =  121 bits (61), Expect = 3e-24
 Identities = 133/157 (84%)
 Strand = Plus / Minus

                                                                          
Query: 453    ggacttcctcagcaattatggttttccgtcaggcaatcaccgctggtctgctaccctcaa 512
              |||| ||||||||||||| ||| | |||| |||||||  || | || ||  |||||||||
Sbjct: 103407 ggacctcctcagcaattaaggtctaccgtgaggcaatttccacaggactattaccctcaa 103348

                                                                          
Query: 513    gcgatgttttatctcaagtgctgggatgtttgaggtttcctcatgacagttcattgaaaa 572
              | |||||||| ||||||||| |||||||||| |||||||||||||| | | |||| | ||
Sbjct: 103347 gtgatgttttgtctcaagtgttgggatgtttaaggtttcctcatgataatacattaacaa 103288

                                                   
Query: 573    acactttcatttataatatgggaataagttgtgatat 609
              | ||||||||| | |||||||||||||||||||||||
Sbjct: 103287 atactttcattgaaaatatgggaataagttgtgatat 103251



 Score =  103 bits (52), Expect = 7e-19
 Identities = 76/84 (90%)
 Strand = Plus / Minus

                                                                          
Query: 62     gccaaggactggaaaaaggcgctgcagctatttgaggagatcaaggctatcaaattaatt 121
              ||||||||||||||||||||  ||||||||||||||||||||||| | ||||||||||| 
Sbjct: 105201 gccaaggactggaaaaaggcattgcagctatttgaggagatcaagtcaatcaaattaatg 105142

                                      
Query: 122    ccaacagttccgatgatgaatgct 145
              ||||| ||| | ||||||||||||
Sbjct: 105141 ccaaccgtttcaatgatgaatgct 105118



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 79/93 (84%)
 Strand = Plus / Minus

                                                                          
Query: 272    aatggtgaagcacaactagctctggatttatttgagcaactaaaagtagatggtattggc 331
              |||| |||||||||||| | | ||||| ||||||| ||| ||||| ||||  |||||| |
Sbjct: 104554 aatgctgaagcacaactgggtttggatctatttgaacaattaaaaatagacagtattgac 104495

                                               
Query: 332    ctcaatcccaccattgtcggttgtcttactggt 364
              ||||||||||| || || |||||||||||||||
Sbjct: 104494 ctcaatcccacaatcgttggttgtcttactggt 104462



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 58/67 (86%)
 Strand = Plus / Minus

                                                                          
Query: 388    tgatctttcacttggcaacatcattgtcagattcaaccaagggaagccacagattgacaa 447
              |||||||||||| ||||| ||| |||||| |||||||  |||||| ||||||||||| ||
Sbjct: 104252 tgatctttcactgggcaatatcgttgtcacattcaacttagggaaaccacagattgagaa 104193

                     
Query: 448    taaatgg 454
               ||||||
Sbjct: 104192 caaatgg 104186



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                          
Query: 1      agcaagggnatttcatgttggaatcatggcatacagttcctgtatgggtgcttgctgcaa 60
              ||||| || || ||| ||||||| ||| ||||||||||| |  |||||||||||||||||
Sbjct: 105445 agcaaagggatatcaagttggaaccattgcatacagttcattaatgggtgcttgctgcaa 105386

                
Query: 61     tg 62
              ||
Sbjct: 105385 tg 105384



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 67/81 (82%)
 Strand = Plus / Minus

                                                                          
Query: 190    tgaggtccttaatgagataagggaactaggtgtccgtccaaatgagataacctattctgt 249
              ||||||||||| |||||| | |  | |||| ||| ||||||||  |||||||||||| ||
Sbjct: 104713 tgaggtccttagtgagatgaagagattaggagtctgtccaaatatgataacctattcggt 104654

                                   
Query: 250    cttatgtgtggcttgcgaaag 270
               |||| ||||||||| |||||
Sbjct: 104653 gttatttgtggcttgtgaaag 104633
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score =  121 bits (61), Expect = 3e-24
 Identities = 133/157 (84%)
 Strand = Plus / Minus

                                                                           
Query: 453     ggacttcctcagcaattatggttttccgtcaggcaatcaccgctggtctgctaccctcaa 512
               |||| ||||||||||||| ||| | |||| |||||||  || | || ||  |||||||||
Sbjct: 5231636 ggacctcctcagcaattaaggtctaccgtgaggcaatttccacaggactattaccctcaa 5231577

                                                                           
Query: 513     gcgatgttttatctcaagtgctgggatgtttgaggtttcctcatgacagttcattgaaaa 572
               | |||||||| ||||||||| |||||||||| |||||||||||||| | | |||| | ||
Sbjct: 5231576 gtgatgttttgtctcaagtgttgggatgtttaaggtttcctcatgataatacattaacaa 5231517

                                                    
Query: 573     acactttcatttataatatgggaataagttgtgatat 609
               | ||||||||| | |||||||||||||||||||||||
Sbjct: 5231516 atactttcattgaaaatatgggaataagttgtgatat 5231480



 Score =  103 bits (52), Expect = 7e-19
 Identities = 76/84 (90%)
 Strand = Plus / Minus

                                                                           
Query: 62      gccaaggactggaaaaaggcgctgcagctatttgaggagatcaaggctatcaaattaatt 121
               ||||||||||||||||||||  ||||||||||||||||||||||| | ||||||||||| 
Sbjct: 5233430 gccaaggactggaaaaaggcattgcagctatttgaggagatcaagtcaatcaaattaatg 5233371

                                       
Query: 122     ccaacagttccgatgatgaatgct 145
               ||||| ||| | ||||||||||||
Sbjct: 5233370 ccaaccgtttcaatgatgaatgct 5233347



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 79/93 (84%)
 Strand = Plus / Minus

                                                                           
Query: 272     aatggtgaagcacaactagctctggatttatttgagcaactaaaagtagatggtattggc 331
               |||| |||||||||||| | | ||||| ||||||| ||| ||||| ||||  |||||| |
Sbjct: 5232783 aatgctgaagcacaactgggtttggatctatttgaacaattaaaaatagacagtattgac 5232724

                                                
Query: 332     ctcaatcccaccattgtcggttgtcttactggt 364
               ||||||||||| || || |||||||||||||||
Sbjct: 5232723 ctcaatcccacaatcgttggttgtcttactggt 5232691



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 58/67 (86%)
 Strand = Plus / Minus

                                                                           
Query: 388     tgatctttcacttggcaacatcattgtcagattcaaccaagggaagccacagattgacaa 447
               |||||||||||| ||||| ||| |||||| |||||||  |||||| ||||||||||| ||
Sbjct: 5232481 tgatctttcactgggcaatatcgttgtcacattcaacttagggaaaccacagattgagaa 5232422

                      
Query: 448     taaatgg 454
                ||||||
Sbjct: 5232421 caaatgg 5232415



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                           
Query: 1       agcaagggnatttcatgttggaatcatggcatacagttcctgtatgggtgcttgctgcaa 60
               ||||| || || ||| ||||||| ||| ||||||||||| |  |||||||||||||||||
Sbjct: 5233674 agcaaagggatatcaagttggaaccattgcatacagttcattaatgggtgcttgctgcaa 5233615

                 
Query: 61      tg 62
               ||
Sbjct: 5233614 tg 5233613



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 67/81 (82%)
 Strand = Plus / Minus

                                                                           
Query: 190     tgaggtccttaatgagataagggaactaggtgtccgtccaaatgagataacctattctgt 249
               ||||||||||| |||||| | |  | |||| ||| ||||||||  |||||||||||| ||
Sbjct: 5232942 tgaggtccttagtgagatgaagagattaggagtctgtccaaatatgataacctattcggt 5232883

                                    
Query: 250     cttatgtgtggcttgcgaaag 270
                |||| ||||||||| |||||
Sbjct: 5232882 gttatttgtggcttgtgaaag 5232862
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  121 bits (61), Expect = 3e-24
 Identities = 133/157 (84%)
 Strand = Plus / Minus

                                                                           
Query: 453     ggacttcctcagcaattatggttttccgtcaggcaatcaccgctggtctgctaccctcaa 512
               |||| ||||||||||||| ||| | |||| |||||||  || | || ||  |||||||||
Sbjct: 5232423 ggacctcctcagcaattaaggtctaccgtgaggcaatttccacaggactattaccctcaa 5232364

                                                                           
Query: 513     gcgatgttttatctcaagtgctgggatgtttgaggtttcctcatgacagttcattgaaaa 572
               | |||||||| ||||||||| |||||||||| |||||||||||||| | | |||| | ||
Sbjct: 5232363 gtgatgttttgtctcaagtgttgggatgtttaaggtttcctcatgataatacattaacaa 5232304

                                                    
Query: 573     acactttcatttataatatgggaataagttgtgatat 609
               | ||||||||| | |||||||||||||||||||||||
Sbjct: 5232303 atactttcattgaaaatatgggaataagttgtgatat 5232267



 Score =  103 bits (52), Expect = 7e-19
 Identities = 76/84 (90%)
 Strand = Plus / Minus

                                                                           
Query: 62      gccaaggactggaaaaaggcgctgcagctatttgaggagatcaaggctatcaaattaatt 121
               ||||||||||||||||||||  ||||||||||||||||||||||| | ||||||||||| 
Sbjct: 5234217 gccaaggactggaaaaaggcattgcagctatttgaggagatcaagtcaatcaaattaatg 5234158

                                       
Query: 122     ccaacagttccgatgatgaatgct 145
               ||||| ||| | ||||||||||||
Sbjct: 5234157 ccaaccgtttcaatgatgaatgct 5234134



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 79/93 (84%)
 Strand = Plus / Minus

                                                                           
Query: 272     aatggtgaagcacaactagctctggatttatttgagcaactaaaagtagatggtattggc 331
               |||| |||||||||||| | | ||||| ||||||| ||| ||||| ||||  |||||| |
Sbjct: 5233570 aatgctgaagcacaactgggtttggatctatttgaacaattaaaaatagacagtattgac 5233511

                                                
Query: 332     ctcaatcccaccattgtcggttgtcttactggt 364
               ||||||||||| || || |||||||||||||||
Sbjct: 5233510 ctcaatcccacaatcgttggttgtcttactggt 5233478



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 58/67 (86%)
 Strand = Plus / Minus

                                                                           
Query: 388     tgatctttcacttggcaacatcattgtcagattcaaccaagggaagccacagattgacaa 447
               |||||||||||| ||||| ||| |||||| |||||||  |||||| ||||||||||| ||
Sbjct: 5233268 tgatctttcactgggcaatatcgttgtcacattcaacttagggaaaccacagattgagaa 5233209

                      
Query: 448     taaatgg 454
                ||||||
Sbjct: 5233208 caaatgg 5233202



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 53/62 (85%)
 Strand = Plus / Minus

                                                                           
Query: 1       agcaagggnatttcatgttggaatcatggcatacagttcctgtatgggtgcttgctgcaa 60
               ||||| || || ||| ||||||| ||| ||||||||||| |  |||||||||||||||||
Sbjct: 5234461 agcaaagggatatcaagttggaaccattgcatacagttcattaatgggtgcttgctgcaa 5234402

                 
Query: 61      tg 62
               ||
Sbjct: 5234401 tg 5234400



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 67/81 (82%)
 Strand = Plus / Minus

                                                                           
Query: 190     tgaggtccttaatgagataagggaactaggtgtccgtccaaatgagataacctattctgt 249
               ||||||||||| |||||| | |  | |||| ||| ||||||||  |||||||||||| ||
Sbjct: 5233729 tgaggtccttagtgagatgaagagattaggagtctgtccaaatatgataacctattcggt 5233670

                                    
Query: 250     cttatgtgtggcttgcgaaag 270
                |||| ||||||||| |||||
Sbjct: 5233669 gttatttgtggcttgtgaaag 5233649
to top
>gb|AE007290.1| Sinorhizobium meliloti 1021 plasmid pSymA section 96 of 121 of the
            complete plasmid sequence
          Length = 12541

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 476  ttccgtcaggcaatcaccgctg 497
            ||||||||||||||||||||||
Sbjct: 2584 ttccgtcaggcaatcaccgctg 2605
to top
>gb|AC152456.1| Pan troglodytes chromosome X clone PTB-055J03 map human ortholog q25,
             complete sequence
          Length = 142891

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 570   aaaacactttcatttataata 590
             |||||||||||||||||||||
Sbjct: 15735 aaaacactttcatttataata 15755
to top
>gb|AC186394.1| Pan troglodytes chromosome 7 clone CH251-302F10, complete sequence
          Length = 183782

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 567   tgaaaaacactttcatttata 587
             |||||||||||||||||||||
Sbjct: 42826 tgaaaaacactttcatttata 42846
to top
>ref|NM_013252.2| Homo sapiens C-type lectin domain family 5, member A (CLEC5A), mRNA
          Length = 3524

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 579  tcatttataatatgggaataa 599
            |||||||||||||||||||||
Sbjct: 3118 tcatttataatatgggaataa 3138
to top
>gb|AC073647.9| Homo sapiens BAC clone RP11-707F14 from 7, complete sequence
          Length = 172777

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 579    tcatttataatatgggaataa 599
              |||||||||||||||||||||
Sbjct: 101078 tcatttataatatgggaataa 101098
to top
>gb|AC124586.3| Mus musculus BAC clone RP23-132E20 from 12, complete sequence
          Length = 188243

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 584   tataatatgggaataagttgt 604
             |||||||||||||||||||||
Sbjct: 38671 tataatatgggaataagttgt 38651
to top
>ref|XM_766287.1| Giardia lamblia ATCC 50803 MAP kinase (GLP_28_16955_18661) partial
           mRNA
          Length = 1707

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 87  agctatttgaggagatcaaggctatcaaa 115
           |||||||| |||||||||||||| |||||
Sbjct: 272 agctatttcaggagatcaaggctctcaaa 300
to top
>ref|XM_666009.1| Plasmodium berghei strain ANKA hypothetical protein (PB404625.00.0)
           partial mRNA
          Length = 143

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 364 tttatgtctacaaatgttttc 384
           |||||||||||||||||||||
Sbjct: 23  tttatgtctacaaatgttttc 3
to top
>emb|AL022577.1|HS353H6 Human DNA sequence from clone RP3-353H6 on chromosome Xq25-26.2 Contains
              the 3' end of the SMARCA1 gene for SWI/SNF related, matrix
              associated, actin dependent regulator of chromatin
              (subfamily a, member 1) and aribosomal protein S26 (RPS26)
              pseudogene, complete sequence
          Length = 147394

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 570    aaaacactttcatttataata 590
              |||||||||||||||||||||
Sbjct: 125771 aaaacactttcatttataata 125791
to top
>emb|AJ271684.1|HSA271684 Homo sapiens mRNA for myeloid DAP12-associating lectin (MDL-1 gene)
          Length = 3510

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 579  tcatttataatatgggaataa 599
            |||||||||||||||||||||
Sbjct: 3117 tcatttataatatgggaataa 3137
to top
>gb|AF411809.1| Lycopersicon esculentum BAC clone FW2.2, complete sequence
          Length = 127892

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 301   atttgagcaactaaaagtaga 321
             |||||||||||||||||||||
Sbjct: 83773 atttgagcaactaaaagtaga 83793
to top
>gb|AC114482.2| Homo sapiens chromosome 1 clone RP11-484D4, complete sequence
          Length = 161874

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 567   tgaaaaacactttcatttata 587
             |||||||||||||||||||||
Sbjct: 67556 tgaaaaacactttcatttata 67536
to top
>gb|AC009265.10| Homo sapiens, clone RP11-45B18, complete sequence
          Length = 179844

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 567    tgaaaaacactttcatttata 587
              |||||||||||||||||||||
Sbjct: 133338 tgaaaaacactttcatttata 133318
to top
>dbj|AP008934.1| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 DNA,
              complete genome
          Length = 2516575

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 567    tgaaaaacactttcatttataatat 591
              ||||||||| |||||||||||||||
Sbjct: 408208 tgaaaaacattttcatttataatat 408232
to top
>ref|XM_397101.2| PREDICTED: Apis mellifera similar to CG32344-PA (LOC413660), mRNA
          Length = 2784

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 572  aacactttcatttataatatg 592
            |||||||||||||||||||||
Sbjct: 1144 aacactttcatttataatatg 1164
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 107      gctatcaaattaattccaaca 127
                |||||||||||||||||||||
Sbjct: 10965544 gctatcaaattaattccaaca 10965524
to top
>dbj|AP002883.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0487H02
          Length = 145491

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 107   gctatcaaattaattccaaca 127
             |||||||||||||||||||||
Sbjct: 68386 gctatcaaattaattccaaca 68366
to top
>gb|AC145388.2| Oryza sativa chromosome 3 BAC OSJNBb0036M02 genomic sequence, complete
             sequence
          Length = 125380

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 115   attaattccaacagttccga 134
             ||||||||||||||||||||
Sbjct: 87626 attaattccaacagttccga 87645
to top
>gb|AC147913.2| Xenopus tropicalis clone CH216-83K3, complete sequence
          Length = 176651

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 147   taatcacttccctctgtgac 166
             ||||||||||||||||||||
Sbjct: 66754 taatcacttccctctgtgac 66773
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 115      attaattccaacagttccga 134
                ||||||||||||||||||||
Sbjct: 26015460 attaattccaacagttccga 26015441
to top
>gb|AC182749.2| Mus musculus BAC clone RP23-464D14 from chromosome 17, complete sequence
          Length = 211198

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 521    ttatctcaagtgctgggatg 540
              ||||||||||||||||||||
Sbjct: 179426 ttatctcaagtgctgggatg 179407
to top
>gb|AC074257.5| Homo sapiens BAC clone RP11-796I2 from 7, complete sequence
          Length = 186047

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 34    cagttcctgtatgggtgcttgctg 57
             |||||||||| |||||||||||||
Sbjct: 13526 cagttcctgtctgggtgcttgctg 13503
to top
>emb|AJ245806.2|ETE245806 Echinops telfairi complete mitochondrial genome
          Length = 16549

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 364  tttatgtctacaaatgtttt 383
            ||||||||||||||||||||
Sbjct: 1160 tttatgtctacaaatgtttt 1141
to top
>gb|AC091170.15| Homo sapiens chromosome 18, clone RP11-879D5, complete sequence
          Length = 198586

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 405    acatcattgtcagattcaaccaag 428
              |||| |||||||||||||||||||
Sbjct: 197138 acataattgtcagattcaaccaag 197115
to top
>gb|AC093583.3| Homo sapiens BAC clone RP13-452N2 from 7, complete sequence
          Length = 178471

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 34    cagttcctgtatgggtgcttgctg 57
             |||||||||| |||||||||||||
Sbjct: 61909 cagttcctgtctgggtgcttgctg 61886
to top
>gb|AC100847.2| Homo sapiens chromosome 18, clone RP11-706P11, complete sequence
          Length = 186784

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 567    tgaaaaacactttcatttat 586
              ||||||||||||||||||||
Sbjct: 110191 tgaaaaacactttcatttat 110172
to top
>gb|AC005013.3| Homo sapiens BAC clone GS1-165L15 from 7, complete sequence
          Length = 195917

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 393    tttcacttggcaacatcatt 412
              ||||||||||||||||||||
Sbjct: 139388 tttcacttggcaacatcatt 139369
to top
>emb|AL929357.1|PFA929357 Plasmodium falciparum strain 3D7, chromosome 9; segment 3/5
          Length = 341050

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 572    aacactttcatttataatat 591
              ||||||||||||||||||||
Sbjct: 279919 aacactttcatttataatat 279900
to top
>emb|AL596125.27| Mouse DNA sequence from clone RP23-5O23 on chromosome 11 Contains the
              Chd3 gene for chromodomain helicase DNA binding protein 3,
              five novel genes, the 3' end of the gene for a novel
              protein similar to dynein and four CpG islands, complete
              sequence
          Length = 165212

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 95     gaggagatcaaggctatcaa 114
              ||||||||||||||||||||
Sbjct: 127079 gaggagatcaaggctatcaa 127060
to top
>emb|AL596086.9| Mouse DNA sequence from clone RP23-168C20 on chromosome 11 Contains the
              3' end of the Tex14 gene for testis expressed gene 14,
              complete sequence
          Length = 200501

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 61     tgccaaggactggaaaaagg 80
              ||||||||||||||||||||
Sbjct: 106163 tgccaaggactggaaaaagg 106144
to top
>emb|AJ400734.2|ETE400734 Echinops telfairi complete mitochondrial genome
          Length = 16549

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 364  tttatgtctacaaatgtttt 383
            ||||||||||||||||||||
Sbjct: 1160 tttatgtctacaaatgtttt 1141
to top
>gb|AC163892.2| Glomus intraradices clone JGIATSX-5O23, complete sequence
          Length = 35427

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 88    gctatttgaggagatcaagg 107
             ||||||||||||||||||||
Sbjct: 27285 gctatttgaggagatcaagg 27266
to top
>gb|AC011291.8| Homo sapiens BAC clone RP11-67G7 from 2, complete sequence
          Length = 150214

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 228   caaatgagataacctattctgtcttatg 255
             ||||||||||||||| |||||| |||||
Sbjct: 59358 caaatgagataacctgttctgttttatg 59331
to top
>gb|AC104988.4| Homo sapiens chromosome 18, clone RP11-732E23, complete sequence
          Length = 171501

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 228   caaatgagataacctattct 247
             ||||||||||||||||||||
Sbjct: 63123 caaatgagataacctattct 63104
to top
>gb|AC019193.7| Homo sapiens BAC clone RP11-335L23 from 4, complete sequence
          Length = 177720

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 295    ggatttatttgagcaactaa 314
              ||||||||||||||||||||
Sbjct: 137820 ggatttatttgagcaactaa 137801
to top
>gb|AC011359.5|AC011359 Homo sapiens chromosome 5 clone CTC-370H24, complete sequence
          Length = 195887

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 227   ccaaatgagataacctattc 246
             ||||||||||||||||||||
Sbjct: 72231 ccaaatgagataacctattc 72212
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 115      attaattccaacagttccga 134
                ||||||||||||||||||||
Sbjct: 26106769 attaattccaacagttccga 26106750
to top
>gb|AC068723.5|AC068723 Homo sapiens chromosome 15 clone RP11-126E3 map 15q21.3, complete
              sequence
          Length = 166151

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 397    acttggcaacatcattgtcagatt 420
              |||||| |||||||||||||||||
Sbjct: 149064 acttgggaacatcattgtcagatt 149087
to top
>gb|AC009503.3| Homo sapiens BAC clone RP11-516K23 from 2, complete sequence
          Length = 201040

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 33     acagttcctgtatgggtgct 52
              ||||||||||||||||||||
Sbjct: 152364 acagttcctgtatgggtgct 152345
to top
>gb|AY011136.1| Echinops telfairi 16S ribosomal RNA gene, partial sequence;
           mitochondrial gene for mitochondrial product
          Length = 805

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 364 tttatgtctacaaatgtttt 383
           ||||||||||||||||||||
Sbjct: 69  tttatgtctacaaatgtttt 50
to top
>gb|AC025272.6|AC025272 Homo sapiens chromosome 15 clone RP11-548M13 map 15q21.3, complete
            sequence
          Length = 170749

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 397  acttggcaacatcattgtcagatt 420
            |||||| |||||||||||||||||
Sbjct: 6983 acttgggaacatcattgtcagatt 7006
to top
>gb|AC093528.3| Homo sapiens chromosome 5 clone RP11-297K24, complete sequence
          Length = 198167

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 579   tcatttataatatgggaataagtt 602
             |||||||||| |||||||||||||
Sbjct: 96465 tcatttataaaatgggaataagtt 96488
to top
>gb|AC127496.5| Homo sapiens chromosome 17, clone CTD-2561B21, complete sequence
          Length = 166274

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 570    aaaacactttcatttataat 589
              ||||||||||||||||||||
Sbjct: 115019 aaaacactttcatttataat 115000
to top
>gb|AC133208.3| Mus musculus BAC clone RP23-17O6 from chromosome unknown, complete
              sequence
          Length = 239189

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 561    gttcattgaaaaacactttc 580
              ||||||||||||||||||||
Sbjct: 187303 gttcattgaaaaacactttc 187284
to top
>gb|AC140472.3| Mus musculus BAC clone RP24-403L12 from chromosome unknown, complete
            sequence
          Length = 166884

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 561  gttcattgaaaaacactttc 580
            ||||||||||||||||||||
Sbjct: 9225 gttcattgaaaaacactttc 9206
to top
>dbj|AB099484.1| Echinops telfairi mitochondrial DNA, complete genome
          Length = 16579

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 364  tttatgtctacaaatgtttt 383
            ||||||||||||||||||||
Sbjct: 1161 tttatgtctacaaatgtttt 1142
to top
>emb|BX649595.7| Zebrafish DNA sequence from clone RP71-81O21, complete sequence
          Length = 26247

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 359   actggtttatgtctacaaat 378
             ||||||||||||||||||||
Sbjct: 19725 actggtttatgtctacaaat 19706
to top
>emb|AJ699306.2| Photobacterium damselae subsp. piscicida siderophore biosynthesis and
             transport gene cluster
          Length = 35691

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 556   tgacagttcattgaaaaaca 575
             ||||||||||||||||||||
Sbjct: 10911 tgacagttcattgaaaaaca 10892
to top
>emb|BX119956.8| Mouse DNA sequence from clone RP23-301K15 on chromosome X, complete
             sequence
          Length = 187028

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 561   gttcattgaaaaacactttc 580
             ||||||||||||||||||||
Sbjct: 32999 gttcattgaaaaacactttc 32980
to top
>gb|AF069540.1|AF069540 Echinops telfairi 12S ribosomal RNA gene, complete sequence; tRNA-Val
            gene, complete sequence; and 16S ribosomal RNA gene,
            complete sequence; mitochondrial genes for mitochondrial
            RNAs
          Length = 2580

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 364  tttatgtctacaaatgtttt 383
            ||||||||||||||||||||
Sbjct: 1096 tttatgtctacaaatgtttt 1077
to top
>emb|AL928981.7| Mouse DNA sequence from clone RP23-54O14 on chromosome 2, complete
             sequence
          Length = 110096

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 204   agataagggaactaggtgtc 223
             ||||||||||||||||||||
Sbjct: 31434 agataagggaactaggtgtc 31453
to top
>gb|AC173477.2| Mus musculus BAC clone RP24-344P5 from chromosome 17, complete sequence
          Length = 155999

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 521   ttatctcaagtgctgggatg 540
             ||||||||||||||||||||
Sbjct: 58699 ttatctcaagtgctgggatg 58680
to top
>gb|AC100778.5| Homo sapiens chromosome 18, clone RP11-110H1, complete sequence
          Length = 173671

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 405   acatcattgtcagattcaaccaag 428
             |||| |||||||||||||||||||
Sbjct: 77653 acataattgtcagattcaaccaag 77630


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,808,599
Number of Sequences: 3902068
Number of extensions: 6808599
Number of successful extensions: 137443
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 136948
Number of HSP's gapped (non-prelim): 484
length of query: 613
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 590
effective length of database: 17,143,297,704
effective search space: 10114545645360
effective search space used: 10114545645360
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top