ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd24f09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK067805.1| Oryza sativa (japonica cultivar-group) cDNA clon... 153 9e-34
2ref|XM_550252.1| Oryza sativa (japonica cultivar-group), mRNA 145 2e-31
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 84 7e-13
4dbj|AP003301.3| Oryza sativa (japonica cultivar-group) genomic D... 84 7e-13
5dbj|AP002912.2| Oryza sativa (japonica cultivar-group) genomic D... 84 7e-13
6gb|AY106078.1| Zea mays PCO121381 mRNA sequence 50 0.009
7emb|BX324129.11| Zebrafish DNA sequence from clone CH211-221D5 i... 46 0.14
8gb|AC110520.12| Mus musculus chromosome 7, clone RP23-24N16, com... 44 0.56
9gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, compl... 44 0.56
10gb|AC084621.1|CBRG44O14 Caenorhabditis briggsae cosmid G44O14, c... 42 2.2
11emb|AL132800.4|CNS01DTM Human chromosome 14 DNA sequence BAC R-8... 42 2.2
12gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 42 2.2
13gb|AC122315.5| Mus musculus BAC clone RP23-302P6 from 10, comple... 42 2.2
14gb|AY394958.1| Danio rerio clone RK053A3F02 BAF53 mRNA, complete... 40 8.8
15ref|NM_173240.1| Danio rerio BRG1/brm-associated factor 53A (baf... 40 8.8
16gb|AY510069.1| Fusarium sporotrichioides 5.8S ribosomal RNA gene... 40 8.8
17gb|AF414973.1| Fusarium sporotrichioides var. minor strain BBA 6... 40 8.8
18gb|AF414972.1| Fusarium sporotrichioides strain BBA 69072 16S ri... 40 8.8
19gb|AF414970.1| Fusarium sporotrichioides strain BBA 70746 16S ri... 40 8.8
20gb|AF414969.1| Fusarium pulverosum strain IBT 8051 16S ribosomal... 40 8.8
21gb|BC045889.1| Danio rerio BRG1/brm-associated factor 53A, mRNA ... 40 8.8
22gb|AC113201.15| Mus musculus chromosome 6, clone RP23-271G7, com... 40 8.8
23gb|AY680864.1| Fusarium langsethiae and 5.8S ribosomal RNA genes... 40 8.8
24emb|CR726316.2|CNS0GNDE Tetraodon nigroviridis full-length cDNA 40 8.8
25ref|XM_649251.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 40 8.8
26emb|AL672040.10| Human DNA sequence from clone RP11-449L4 on chr... 40 8.8
27emb|AL513170.16| Human DNA sequence from clone RP11-285B4 on chr... 40 8.8
28gb|AC139034.7| Mus musculus chromosome 6, clone RP23-350J11, com... 40 8.8
29gb|DQ093674.1| Fusarium sporotrichioides isolate aurim1238 small... 40 8.8
30emb|AJ345036.1|TRU345036 Takifugu rubripes a2a1AR gene for alpha... 40 8.8
31gb|AC123903.2| Homo sapiens chromosome 3 clone RP11-182A24, comp... 40 8.8
32gb|AY099520.1| Danio rerio BRG1/brm-associated factor 53A (baf53... 40 8.8
33gb|AC011120.11| Homo sapiens chromosome 17, clone RP11-171G2, co... 40 8.8
34gb|AC007923.7| Homo sapiens chromosome 17, clone RP11-805L22, co... 40 8.8
35gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 40 8.8
36ref|XM_682012.1| PREDICTED: Danio rerio similar to BRG1/brm-asso... 40 8.8
37dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
38gb|AC152159.6| Mus musculus chromosome 15, clone RP23-10O8, comp... 40 8.8
39gb|AC011529.4| Homo sapiens chromosome 19 clone LLNLR-227F11, co... 40 8.8
40dbj|AP003512.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
41dbj|AP004681.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
42ref|XM_556836.1| Anopheles gambiae str. PEST ENSANGP00000027170 ... 40 8.8
43ref|XM_309080.2| Anopheles gambiae str. PEST ENSANGP00000019588 ... 40 8.8
44emb|AM162681.1| Uncultured Fusarium sp. ITS1, 5.8S rRNA gene and... 40 8.8
45gb|AF111059.1|AF111059 Fusarium chlamydosporum strain BBA62170 1... 40 8.8
46gb|AF111055.1|AF111055 Fusarium sporotrichioides strain BBA69073... 40 8.8
47gb|AF111053.1|AF111053 Fusarium sporotrichioides strain RUS446 1... 40 8.8
48gb|U85541.1|FSU85541 Fusarium sporotrichioides internal transcri... 40 8.8
49gb|AF006348.1|AF006348 Fusarium sporotrichioides NRRL 25479 inte... 40 8.8
50gb|AF006347.1|AF006347 Fusarium sporotrichioides NRRL 25474 inte... 40 8.8
51gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome 40 8.8
52gb|AC132480.5| Mus musculus BAC clone RP23-11I14 from 6, complet... 40 8.8
53gb|U85533.1|GAU85533 Gibberella acuminata internal transcribed s... 40 8.8
54emb|AL928701.7| Zebrafish DNA sequence from clone CH211-201H21, ... 40 8.8
55emb|AL808141.8| Zebrafish DNA sequence from clone CH211-260N19, ... 40 8.8
56gb|U38553.1|FSU38553 Fusarium sporotrichioides 5.8S ribosomal RN... 40 8.8
57gb|U38551.1|FSU38551 Fusarium sporotrichioides 5.8S ribosomal RN... 40 8.8
58gb|AC080037.11| Homo sapiens chromosome 17, clone CTD-3010D24, c... 40 8.8
59gb|AY188917.1| Fusarium sporotrichioides 18S ribosomal RNA gene,... 40 8.8
60dbj|D88424.1| Cyanidium caldarium mRNA for plasma membrane H+-AT... 40 8.8 
>dbj|AK067805.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119N08, full
           insert sequence
          Length = 1301

 Score =  153 bits (77), Expect = 9e-34
 Identities = 203/245 (82%)
 Strand = Plus / Plus

                                                                       
Query: 257 caggattaacttcggcaaacggaaagctgtgtgtactgtgtgagcaatactcaaccgaag 316
           |||| |||||||| || || ||||||||||||  ||| || ||||| |||||||| ||||
Sbjct: 413 cagggttaacttcagccaatggaaagctgtgtcaactatgcgagcagtactcaacggaag 472

                                                                       
Query: 317 ctctggtctacctgcgacaaaaagaaacccaaaccgagattctcagtgtcctccaccaca 376
           ||||| ||||||| | |||||| ||||||||||| |||||||| ||  ||||||||||  
Sbjct: 473 ctctgttctacctccaacaaaatgaaacccaaactgagattcttagcatcctccaccatg 532

                                                                       
Query: 377 cgtgtgcaagtcttggtcctctaagacagcagtgcatgacgctggtcgactactacattc 436
           | || ||||   |||| ||||||| |||||||||||| || ||||| |||||||||||||
Sbjct: 533 catgcgcaaacgttggacctctaaaacagcagtgcatcactctggttgactactacattc 592

                                                                       
Query: 437 ccgctttcttcttggaggtttctgtgcttaaacctgaggagttatgtgaatcagcgcacc 496
           ||  ||||||||||||||||||  || | | ||||||  |||| |||||||||| ||| |
Sbjct: 593 cccttttcttcttggaggtttcgatggtaacacctgaaaagttctgtgaatcagtgcatc 652

                
Query: 497 tctgc 501
           |||||
Sbjct: 653 tctgc 657



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 87/102 (85%)
 Strand = Plus / Plus

                                                                       
Query: 544 tgcggcctatgccatcatgttcttgttgaagttcttaccatgcttaaagatcccaacacc 603
           |||||| |||||||||||||||||||||||||||||| |||||| || |||||  |||  
Sbjct: 700 tgcggcatatgccatcatgttcttgttgaagttcttatcatgctaaaggatcctgacatg 759

                                                     
Query: 604 aagctggagatagtcgggcttcttttcaaaacatgcagcaag 645
            ||||||||||||||| | |  || ||||| |||||||||||
Sbjct: 760 cagctggagatagtcgagatatttctcaaagcatgcagcaag 801
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>ref|XM_550252.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1301

 Score =  145 bits (73), Expect = 2e-31
 Identities = 202/245 (82%)
 Strand = Plus / Plus

                                                                       
Query: 257 caggattaacttcggcaaacggaaagctgtgtgtactgtgtgagcaatactcaaccgaag 316
           |||| |||||||| || || ||||||||||||  ||| || ||||| |||||||| ||||
Sbjct: 413 cagggttaacttcagccaatggaaagctgtgtcaactatgcgagcagtactcaacggaag 472

                                                                       
Query: 317 ctctggtctacctgcgacaaaaagaaacccaaaccgagattctcagtgtcctccaccaca 376
           | ||| ||||||| | |||||| ||||||||||| |||||||| ||  ||||||||||  
Sbjct: 473 cactgttctacctccaacaaaatgaaacccaaactgagattcttagcatcctccaccatg 532

                                                                       
Query: 377 cgtgtgcaagtcttggtcctctaagacagcagtgcatgacgctggtcgactactacattc 436
           | || ||||   |||| ||||||| |||||||||||| || ||||| |||||||||||||
Sbjct: 533 catgcgcaaacgttggacctctaaaacagcagtgcatcactctggttgactactacattc 592

                                                                       
Query: 437 ccgctttcttcttggaggtttctgtgcttaaacctgaggagttatgtgaatcagcgcacc 496
           ||  ||||||||||||||||||  || | | ||||||  |||| |||||||||| ||| |
Sbjct: 593 cccttttcttcttggaggtttcgatggtaacacctgaaaagttctgtgaatcagtgcatc 652

                
Query: 497 tctgc 501
           |||||
Sbjct: 653 tctgc 657



 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 87/102 (85%)
 Strand = Plus / Plus

                                                                       
Query: 544 tgcggcctatgccatcatgttcttgttgaagttcttaccatgcttaaagatcccaacacc 603
           |||||| |||||||||||||||||||||||||||||| |||||| || |||||  |||  
Sbjct: 700 tgcggcatatgccatcatgttcttgttgaagttcttatcatgctaaaggatcctgacatg 759

                                                     
Query: 604 aagctggagatagtcgggcttcttttcaaaacatgcagcaag 645
            ||||||||||||||| | |  || ||||| |||||||||||
Sbjct: 760 cagctggagatagtcgagatatttctcaaagcatgcagcaag 801
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 99/118 (83%)
 Strand = Plus / Plus

                                                                           
Query: 257     caggattaacttcggcaaacggaaagctgtgtgtactgtgtgagcaatactcaaccgaag 316
               |||| |||||||| || || ||||||||||||  ||| || ||||| |||||||| ||||
Sbjct: 3423090 cagggttaacttcagccaatggaaagctgtgtcaactatgcgagcagtactcaacggaag 3423149

                                                                         
Query: 317     ctctggtctacctgcgacaaaaagaaacccaaaccgagattctcagtgtcctccacca 374
               | ||| ||||||| | |||||| ||||||||||| |||||||| ||  ||||||||||
Sbjct: 3423150 cactgttctacctccaacaaaatgaaacccaaactgagattcttagcatcctccacca 3423207



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 49/53 (92%)
 Strand = Plus / Plus

                                                                    
Query: 544     tgcggcctatgccatcatgttcttgttgaagttcttaccatgcttaaagatcc 596
               |||||| |||||||||||||||||||||||||||||| |||||| || |||||
Sbjct: 3423468 tgcggcatatgccatcatgttcttgttgaagttcttatcatgctaaaggatcc 3423520



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 81/96 (84%)
 Strand = Plus / Plus

                                                                           
Query: 406     cagtgcatgacgctggtcgactactacattcccgctttcttcttggaggtttctgtgctt 465
               |||||||| || ||||| |||||||||||||||  ||||||||||||||||||  || | 
Sbjct: 3423330 cagtgcatcactctggttgactactacattccccttttcttcttggaggtttcgatggta 3423389

                                                   
Query: 466     aaacctgaggagttatgtgaatcagcgcacctctgc 501
               | ||||||  |||| |||||||||| ||| ||||||
Sbjct: 3423390 acacctgaaaagttctgtgaatcagtgcatctctgc 3423425
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>dbj|AP003301.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0701D05
          Length = 172161

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 99/118 (83%)
 Strand = Plus / Plus

                                                                          
Query: 257    caggattaacttcggcaaacggaaagctgtgtgtactgtgtgagcaatactcaaccgaag 316
              |||| |||||||| || || ||||||||||||  ||| || ||||| |||||||| ||||
Sbjct: 101460 cagggttaacttcagccaatggaaagctgtgtcaactatgcgagcagtactcaacggaag 101519

                                                                        
Query: 317    ctctggtctacctgcgacaaaaagaaacccaaaccgagattctcagtgtcctccacca 374
              | ||| ||||||| | |||||| ||||||||||| |||||||| ||  ||||||||||
Sbjct: 101520 cactgttctacctccaacaaaatgaaacccaaactgagattcttagcatcctccacca 101577



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 49/53 (92%)
 Strand = Plus / Plus

                                                                   
Query: 544    tgcggcctatgccatcatgttcttgttgaagttcttaccatgcttaaagatcc 596
              |||||| |||||||||||||||||||||||||||||| |||||| || |||||
Sbjct: 101838 tgcggcatatgccatcatgttcttgttgaagttcttatcatgctaaaggatcc 101890



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 81/96 (84%)
 Strand = Plus / Plus

                                                                          
Query: 406    cagtgcatgacgctggtcgactactacattcccgctttcttcttggaggtttctgtgctt 465
              |||||||| || ||||| |||||||||||||||  ||||||||||||||||||  || | 
Sbjct: 101700 cagtgcatcactctggttgactactacattccccttttcttcttggaggtttcgatggta 101759

                                                  
Query: 466    aaacctgaggagttatgtgaatcagcgcacctctgc 501
              | ||||||  |||| |||||||||| ||| ||||||
Sbjct: 101760 acacctgaaaagttctgtgaatcagtgcatctctgc 101795
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>dbj|AP002912.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0028E10
          Length = 140791

 Score = 83.8 bits (42), Expect = 7e-13
 Identities = 99/118 (83%)
 Strand = Plus / Plus

                                                                        
Query: 257  caggattaacttcggcaaacggaaagctgtgtgtactgtgtgagcaatactcaaccgaag 316
            |||| |||||||| || || ||||||||||||  ||| || ||||| |||||||| ||||
Sbjct: 9850 cagggttaacttcagccaatggaaagctgtgtcaactatgcgagcagtactcaacggaag 9909

                                                                      
Query: 317  ctctggtctacctgcgacaaaaagaaacccaaaccgagattctcagtgtcctccacca 374
            | ||| ||||||| | |||||| ||||||||||| |||||||| ||  ||||||||||
Sbjct: 9910 cactgttctacctccaacaaaatgaaacccaaactgagattcttagcatcctccacca 9967



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 49/53 (92%)
 Strand = Plus / Plus

                                                                  
Query: 544   tgcggcctatgccatcatgttcttgttgaagttcttaccatgcttaaagatcc 596
             |||||| |||||||||||||||||||||||||||||| |||||| || |||||
Sbjct: 10228 tgcggcatatgccatcatgttcttgttgaagttcttatcatgctaaaggatcc 10280



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 81/96 (84%)
 Strand = Plus / Plus

                                                                         
Query: 406   cagtgcatgacgctggtcgactactacattcccgctttcttcttggaggtttctgtgctt 465
             |||||||| || ||||| |||||||||||||||  ||||||||||||||||||  || | 
Sbjct: 10090 cagtgcatcactctggttgactactacattccccttttcttcttggaggtttcgatggta 10149

                                                 
Query: 466   aaacctgaggagttatgtgaatcagcgcacctctgc 501
             | ||||||  |||| |||||||||| ||| ||||||
Sbjct: 10150 acacctgaaaagttctgtgaatcagtgcatctctgc 10185
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>gb|AY106078.1| Zea mays PCO121381 mRNA sequence
          Length = 740

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                            
Query: 553 tgccatcatgttcttgttgaagttcttaccatgcttaaagatcccaaca 601
           ||||| |||||| |||||||  |||||| |||||||||||| |||||||
Sbjct: 645 tgccaccatgttgttgttgagattcttatcatgcttaaagaccccaaca 693



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                            
Query: 407 agtgcatgacgctggtcgactactacattcccgctttcttcttggaggt 455
           ||||||| |||||||| ||||||||| | |||  |||||||||||||||
Sbjct: 499 agtgcatcacgctggttgactactacgtaccccttttcttcttggaggt 547
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>emb|BX324129.11| Zebrafish DNA sequence from clone CH211-221D5 in linkage group 2,
             complete sequence
          Length = 111186

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 448   ttggaggtttctgtgcttaaacc 470
             |||||||||||||||||||||||
Sbjct: 21917 ttggaggtttctgtgcttaaacc 21939
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>gb|AC110520.12| Mus musculus chromosome 7, clone RP23-24N16, complete sequence
          Length = 248540

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 231    aagcttccctcttgcaagcaaa 252
              ||||||||||||||||||||||
Sbjct: 167113 aagcttccctcttgcaagcaaa 167134
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>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 415    acgctggtcgactactacattc 436
              ||||||||||||||||||||||
Sbjct: 330329 acgctggtcgactactacattc 330350
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>gb|AC084621.1|CBRG44O14 Caenorhabditis briggsae cosmid G44O14, complete sequence
          Length = 42064

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 217 atattgacccaggaaagcttc 237
           |||||||||||||||||||||
Sbjct: 554 atattgacccaggaaagcttc 574
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>emb|AL132800.4|CNS01DTM Human chromosome 14 DNA sequence BAC R-80A15 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 185251

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 439    gctttcttcttggaggtttct 459
              |||||||||||||||||||||
Sbjct: 171329 gctttcttcttggaggtttct 171309
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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 142     ctcgcgctggcctttaccgcc 162
               |||||||||||||||||||||
Sbjct: 2040255 ctcgcgctggcctttaccgcc 2040235



 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 136     ctgctgctcgcgctggcctt 155
               ||||||||||||||||||||
Sbjct: 1856070 ctgctgctcgcgctggcctt 1856051
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>gb|AC122315.5| Mus musculus BAC clone RP23-302P6 from 10, complete sequence
          Length = 197288

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 387   tcttggtcctctaagacagcagtgc 411
             ||||||||||||||| |||||||||
Sbjct: 48357 tcttggtcctctaaggcagcagtgc 48333
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>gb|AY394958.1| Danio rerio clone RK053A3F02 BAF53 mRNA, complete cds
          Length = 1929

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 431 acattcccgctttcttcttg 450
           ||||||||||||||||||||
Sbjct: 623 acattcccgctttcttcttg 642
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>ref|NM_173240.1| Danio rerio BRG1/brm-associated factor 53A (baf53a), mRNA
          Length = 1820

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 431 acattcccgctttcttcttg 450
           ||||||||||||||||||||
Sbjct: 543 acattcccgctttcttcttg 562
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>gb|AY510069.1| Fusarium sporotrichioides 5.8S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 2, complete
           sequence; and 28S ribosomal RNA gene, partial sequence
          Length = 339

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 591 agatcccaacaccaagctgg 610
           ||||||||||||||||||||
Sbjct: 68  agatcccaacaccaagctgg 49
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>gb|AF414973.1| Fusarium sporotrichioides var. minor strain BBA 62425 16S ribosomal
           RNA gene, partial sequence; internal transcribed spacer
           1, 5.8S ribosomal RNA gene and internal transcribed
           spacer 2, complete sequence; and 28S ribosomal RNA gene,
           partial sequence
          Length = 537

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 591 agatcccaacaccaagctgg 610
           ||||||||||||||||||||
Sbjct: 369 agatcccaacaccaagctgg 350
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>gb|AF414972.1| Fusarium sporotrichioides strain BBA 69072 16S ribosomal RNA gene,
           partial sequence; internal transcribed spacer 1, 5.8S
           ribosomal RNA gene and internal transcribed spacer 2,
           complete sequence; and 28S ribosomal RNA gene, partial
           sequence
          Length = 537

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 591 agatcccaacaccaagctgg 610
           ||||||||||||||||||||
Sbjct: 369 agatcccaacaccaagctgg 350
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>gb|AF414970.1| Fusarium sporotrichioides strain BBA 70746 16S ribosomal RNA gene,
           partial sequence; internal transcribed spacer 1, 5.8S
           ribosomal RNA gene and internal transcribed spacer 2,
           complete sequence; and 28S ribosomal RNA gene, partial
           sequence
          Length = 537

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 591 agatcccaacaccaagctgg 610
           ||||||||||||||||||||
Sbjct: 369 agatcccaacaccaagctgg 350
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>gb|AF414969.1| Fusarium pulverosum strain IBT 8051 16S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, 5.8S ribosomal
           RNA gene and internal transcribed spacer 2, complete
           sequence; and 28S ribosomal RNA gene, partial sequence
          Length = 537

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 591 agatcccaacaccaagctgg 610
           ||||||||||||||||||||
Sbjct: 369 agatcccaacaccaagctgg 350
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>gb|BC045889.1| Danio rerio BRG1/brm-associated factor 53A, mRNA (cDNA clone
           MGC:56056 IMAGE:3820465), complete cds
          Length = 1862

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 431 acattcccgctttcttcttg 450
           ||||||||||||||||||||
Sbjct: 553 acattcccgctttcttcttg 572
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>gb|AC113201.15| Mus musculus chromosome 6, clone RP23-271G7, complete sequence
          Length = 205816

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 281   agctgtgtgtactgtgtgagcaat 304
             |||||||||||||||||| |||||
Sbjct: 39990 agctgtgtgtactgtgtgtgcaat 39967
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>gb|AY680864.1| Fusarium langsethiae and 5.8S ribosomal RNA genes and internal
           transcribed spacer 2, complete sequence
          Length = 458

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 591 agatcccaacaccaagctgg 610
           ||||||||||||||||||||
Sbjct: 339 agatcccaacaccaagctgg 320
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>emb|CR726316.2|CNS0GNDE Tetraodon nigroviridis full-length cDNA
          Length = 1402

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 596 ccaacaccaagctggagata 615
           ||||||||||||||||||||
Sbjct: 359 ccaacaccaagctggagata 378
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>ref|XM_649251.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (56.t00004)
           partial mRNA
          Length = 615

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 560 atgttcttgttgaagttctt 579
           ||||||||||||||||||||
Sbjct: 378 atgttcttgttgaagttctt 359
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>emb|AL672040.10| Human DNA sequence from clone RP11-449L4 on chromosome X, complete
              sequence
          Length = 117297

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 624    tcttttcaaaacatgcagca 643
              ||||||||||||||||||||
Sbjct: 100445 tcttttcaaaacatgcagca 100464
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>emb|AL513170.16| Human DNA sequence from clone RP11-285B4 on chromosome 1, complete
            sequence
          Length = 96748

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 222  gacccaggaaagcttccctc 241
            ||||||||||||||||||||
Sbjct: 7150 gacccaggaaagcttccctc 7169
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>gb|AC139034.7| Mus musculus chromosome 6, clone RP23-350J11, complete sequence
          Length = 247394

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 281    agctgtgtgtactgtgtgagcaat 304
              |||||||||||||||||| |||||
Sbjct: 206196 agctgtgtgtactgtgtgtgcaat 206173
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>gb|DQ093674.1| Fusarium sporotrichioides isolate aurim1238 small subunit ribosomal
           RNA gene, partial sequence; internal transcribed spacer
           1, 5.8S ribosomal RNA gene, and internal transcribed
           spacer 2, complete sequence; and large subunit ribosomal
           RNA gene, partial sequence
          Length = 524

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 591 agatcccaacaccaagctgg 610
           ||||||||||||||||||||
Sbjct: 378 agatcccaacaccaagctgg 359
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>emb|AJ345036.1|TRU345036 Takifugu rubripes a2a1AR gene for alpha2 a1 adrenergic receptor, exon
            1
          Length = 3601

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 267  ttcggcaaacggaaagctgt 286
            ||||||||||||||||||||
Sbjct: 3403 ttcggcaaacggaaagctgt 3422
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>gb|AC123903.2| Homo sapiens chromosome 3 clone RP11-182A24, complete sequence
          Length = 162351

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 165   ggttgcagagagcagagatg 184
             ||||||||||||||||||||
Sbjct: 46391 ggttgcagagagcagagatg 46372
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>gb|AY099520.1| Danio rerio BRG1/brm-associated factor 53A (baf53a) mRNA, complete
           cds
          Length = 1820

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 431 acattcccgctttcttcttg 450
           ||||||||||||||||||||
Sbjct: 543 acattcccgctttcttcttg 562
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>gb|AC011120.11| Homo sapiens chromosome 17, clone RP11-171G2, complete sequence
          Length = 167746

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 211    gcctgcatattgacccagga 230
              ||||||||||||||||||||
Sbjct: 101274 gcctgcatattgacccagga 101255
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>gb|AC007923.7| Homo sapiens chromosome 17, clone RP11-805L22, complete sequence
          Length = 180270

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 165    ggttgcagagagcagagatg 184
              ||||||||||||||||||||
Sbjct: 138813 ggttgcagagagcagagatg 138794
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>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 404     agcagtgcatgacgctggtc 423
               ||||||||||||||||||||
Sbjct: 3202829 agcagtgcatgacgctggtc 3202810
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>ref|XM_682012.1| PREDICTED: Danio rerio similar to BRG1/brm-associated factor 53A
           (LOC572888), partial mRNA
          Length = 1379

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 431 acattcccgctttcttcttg 450
           ||||||||||||||||||||
Sbjct: 604 acattcccgctttcttcttg 623
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 207      atatgcctgcatattgaccc 226
                ||||||||||||||||||||
Sbjct: 16100921 atatgcctgcatattgaccc 16100902
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>gb|AC152159.6| Mus musculus chromosome 15, clone RP23-10O8, complete sequence
          Length = 217045

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 277   ggaaagctgtgtgtactgtg 296
             ||||||||||||||||||||
Sbjct: 90801 ggaaagctgtgtgtactgtg 90782
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>gb|AC011529.4| Homo sapiens chromosome 19 clone LLNLR-227F11, complete sequence
          Length = 37522

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 165  ggttgcagagagcagagatg 184
            ||||||||||||||||||||
Sbjct: 6553 ggttgcagagagcagagatg 6534
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>dbj|AP003512.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0618D11
          Length = 150103

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 207    atatgcctgcatattgaccc 226
              ||||||||||||||||||||
Sbjct: 129650 atatgcctgcatattgaccc 129631
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>dbj|AP004681.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
            clone:OSJNBa0040M10
          Length = 162790

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 207  atatgcctgcatattgaccc 226
            ||||||||||||||||||||
Sbjct: 5714 atatgcctgcatattgaccc 5695
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>ref|XM_556836.1| Anopheles gambiae str. PEST ENSANGP00000027170
           (ENSANGG00000022991), partial mRNA
          Length = 393

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 330 gcgacaaaaagaaacccaaaccga 353
           |||| |||||||||||||||||||
Sbjct: 59  gcgataaaaagaaacccaaaccga 82
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>ref|XM_309080.2| Anopheles gambiae str. PEST ENSANGP00000019588 (ENSANGG00000017099),
            partial mRNA
          Length = 2481

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 559  catgttcttgttgaagttct 578
            ||||||||||||||||||||
Sbjct: 2085 catgttcttgttgaagttct 2066
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>emb|AM162681.1| Uncultured Fusarium sp. ITS1, 5.8S rRNA gene and ITS2, clone (16)5
          Length = 462

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 591 agatcccaacaccaagctgg 610
           ||||||||||||||||||||
Sbjct: 327 agatcccaacaccaagctgg 308
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>gb|AF111059.1|AF111059 Fusarium chlamydosporum strain BBA62170 18S ribosomal RNA gene,
           partial sequence; internal transcribed spacer 1, 5.8S
           ribosomal RNA gene and internal transcribed spacer 2,
           complete sequence; and 28S ribosomal RNA gene, partial
           sequence
          Length = 492

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 591 agatcccaacaccaagctgg 610
           ||||||||||||||||||||
Sbjct: 339 agatcccaacaccaagctgg 320
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>gb|AF111055.1|AF111055 Fusarium sporotrichioides strain BBA69073 18S ribosomal RNA gene,
           partial sequence; internal transcribed spacer 1, 5.8S
           ribosomal RNA gene and internal transcribed spacer 2,
           complete sequence; and 28S ribosomal RNA gene, partial
           sequence
          Length = 493

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 591 agatcccaacaccaagctgg 610
           ||||||||||||||||||||
Sbjct: 339 agatcccaacaccaagctgg 320
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>gb|AF111053.1|AF111053 Fusarium sporotrichioides strain RUS446 18S ribosomal RNA gene,
           partial sequence; internal transcribed spacer 1, 5.8S
           ribosomal RNA gene and internal transcribed spacer 2,
           complete sequence; and 28S ribosomal RNA gene, partial
           sequence
          Length = 492

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 591 agatcccaacaccaagctgg 610
           ||||||||||||||||||||
Sbjct: 339 agatcccaacaccaagctgg 320
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>gb|U85541.1|FSU85541 Fusarium sporotrichioides internal transcribed spacer ITS1, 5.8S
           ribosomal RNA gene, and internal transcribed spacer
           ITS2, complete sequence
          Length = 522

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 591 agatcccaacaccaagctgg 610
           ||||||||||||||||||||
Sbjct: 369 agatcccaacaccaagctgg 350
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>gb|AF006348.1|AF006348 Fusarium sporotrichioides NRRL 25479 internal transcribed spacer 1,
           5.8S ribosomal RNA gene; and internal transcribed spacer
           2, complete sequence
          Length = 516

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 591 agatcccaacaccaagctgg 610
           ||||||||||||||||||||
Sbjct: 363 agatcccaacaccaagctgg 344
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>gb|AF006347.1|AF006347 Fusarium sporotrichioides NRRL 25474 internal transcribed spacer 1,
           5.8S ribosomal RNA gene; and internal transcribed spacer
           2, complete sequence
          Length = 515

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 591 agatcccaacaccaagctgg 610
           ||||||||||||||||||||
Sbjct: 365 agatcccaacaccaagctgg 346
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>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
          Length = 7215267

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 590     aagatcccaacaccaagctg 609
               ||||||||||||||||||||
Sbjct: 4951075 aagatcccaacaccaagctg 4951094
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>gb|AC132480.5| Mus musculus BAC clone RP23-11I14 from 6, complete sequence
          Length = 230313

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 281   agctgtgtgtactgtgtgagcaat 304
             |||||||||||||||||| |||||
Sbjct: 31610 agctgtgtgtactgtgtgtgcaat 31633
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>gb|U85533.1|GAU85533 Gibberella acuminata internal transcribed spacer ITS1, 5.8S
           ribosomal RNA gene, and internal transcribed spacer
           ITS2, complete sequence
          Length = 522

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 591 agatcccaacaccaagctgg 610
           ||||||||||||||||||||
Sbjct: 369 agatcccaacaccaagctgg 350
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>emb|AL928701.7| Zebrafish DNA sequence from clone CH211-201H21, complete sequence
          Length = 188745

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 431    acattcccgctttcttcttg 450
              ||||||||||||||||||||
Sbjct: 144334 acattcccgctttcttcttg 144353
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>emb|AL808141.8| Zebrafish DNA sequence from clone CH211-260N19, complete sequence
          Length = 147111

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 431    acattcccgctttcttcttg 450
              ||||||||||||||||||||
Sbjct: 142871 acattcccgctttcttcttg 142890
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>gb|U38553.1|FSU38553 Fusarium sporotrichioides 5.8S ribosomal RNA gene, complete
           sequence and internal transcribed spacers 1 and 2
          Length = 457

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 591 agatcccaacaccaagctgg 610
           ||||||||||||||||||||
Sbjct: 338 agatcccaacaccaagctgg 319
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>gb|U38551.1|FSU38551 Fusarium sporotrichioides 5.8S ribosomal RNA gene, complete
           sequence and internal transcribed spacers 1 and 2
          Length = 457

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 591 agatcccaacaccaagctgg 610
           ||||||||||||||||||||
Sbjct: 338 agatcccaacaccaagctgg 319
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>gb|AC080037.11| Homo sapiens chromosome 17, clone CTD-3010D24, complete sequence
          Length = 248996

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 211    gcctgcatattgacccagga 230
              ||||||||||||||||||||
Sbjct: 208377 gcctgcatattgacccagga 208358
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>gb|AY188917.1| Fusarium sporotrichioides 18S ribosomal RNA gene, partial sequence;
           internal transcribed spacer 1, 5.8S ribosomal RNA gene
           and internal transcribed spacer 2, complete sequence;
           and 28S ribosomal RNA gene, partial sequence
          Length = 1135

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 591 agatcccaacaccaagctgg 610
           ||||||||||||||||||||
Sbjct: 369 agatcccaacaccaagctgg 350
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>dbj|D88424.1| Cyanidium caldarium mRNA for plasma membrane H+-ATPase, complete cds
          Length = 3291

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 99   catggcgatggcttgctcga 118
            ||||||||||||||||||||
Sbjct: 1866 catggcgatggcttgctcga 1847


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,812,071
Number of Sequences: 3902068
Number of extensions: 4812071
Number of successful extensions: 107870
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 107547
Number of HSP's gapped (non-prelim): 319
length of query: 645
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 622
effective length of database: 17,143,297,704
effective search space: 10663131171888
effective search space used: 10663131171888
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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