ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd24f07 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1120 bits (565), Expect = 0.0 Identities = 582/585 (99%), Gaps = 2/585 (0%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 120021 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 119964 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119963 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 119904 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119903 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 119844 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119843 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 119784 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119783 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 119724 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 119723 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 119664 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119663 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 119604 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119603 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 119544 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119543 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 119484 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaacgga 585 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119483 aatgagccggcgactcataggcagtggcttggttaagggaacgga 119439 Score = 1120 bits (565), Expect = 0.0 Identities = 582/585 (99%), Gaps = 2/585 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 94873 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 94930 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94931 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 94990 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 94991 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 95050 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95051 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 95110 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95111 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 95170 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 95171 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 95230 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95231 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 95290 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95291 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 95350 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95351 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 95410 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaacgga 585 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95411 aatgagccggcgactcataggcagtggcttggttaagggaacgga 95455
>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11, complete sequence Length = 120228 Score = 1112 bits (561), Expect = 0.0 Identities = 581/585 (99%), Gaps = 2/585 (0%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 118802 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 118745 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 118744 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 118685 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118684 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 118625 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118624 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 118565 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118564 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 118505 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 118504 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 118445 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118444 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 118385 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118384 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 118325 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118324 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 118265 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaacgga 585 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 118264 aatgagccggcgactcataggcagtggcttggttaagggaacgga 118220
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 1112 bits (561), Expect = 0.0 Identities = 581/585 (99%), Gaps = 2/585 (0%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 119886 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 119829 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 119828 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 119769 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119768 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 119709 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119708 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 119649 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119648 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 119589 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 119588 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 119529 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119528 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 119469 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119468 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 119409 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119408 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 119349 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaacgga 585 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119348 aatgagccggcgactcataggcagtggcttggttaagggaacgga 119304 Score = 1112 bits (561), Expect = 0.0 Identities = 581/585 (99%), Gaps = 2/585 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 95270 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 95327 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 95328 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 95387 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95388 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 95447 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95448 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 95507 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95508 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 95567 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 95568 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 95627 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95628 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 95687 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95688 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 95747 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95748 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 95807 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaacgga 585 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95808 aatgagccggcgactcataggcagtggcttggttaagggaacgga 95852
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 1112 bits (561), Expect = 0.0 Identities = 581/585 (99%), Gaps = 2/585 (0%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 119886 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 119829 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 119828 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 119769 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119768 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 119709 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119708 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 119649 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119648 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 119589 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 119588 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 119529 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119528 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 119469 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119468 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 119409 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119408 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 119349 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaacgga 585 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119348 aatgagccggcgactcataggcagtggcttggttaagggaacgga 119304 Score = 1112 bits (561), Expect = 0.0 Identities = 581/585 (99%), Gaps = 2/585 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 95270 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 95327 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 95328 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 95387 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95388 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 95447 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95448 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 95507 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95508 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 95567 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 95568 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 95627 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95628 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 95687 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95688 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 95747 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95748 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 95807 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaacgga 585 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95808 aatgagccggcgactcataggcagtggcttggttaagggaacgga 95852
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 1112 bits (561), Expect = 0.0 Identities = 581/585 (99%), Gaps = 2/585 (0%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 119835 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 119778 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 119777 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 119718 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119717 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 119658 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119657 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 119598 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119597 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 119538 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 119537 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 119478 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119477 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 119418 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119417 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 119358 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119357 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 119298 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaacgga 585 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119297 aatgagccggcgactcataggcagtggcttggttaagggaacgga 119253 Score = 1112 bits (561), Expect = 0.0 Identities = 581/585 (99%), Gaps = 2/585 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 95215 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 95272 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 95273 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 95332 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95333 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 95392 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95393 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 95452 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95453 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 95512 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 95513 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 95572 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95573 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 95632 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95633 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 95692 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95693 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 95752 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaacgga 585 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95753 aatgagccggcgactcataggcagtggcttggttaagggaacgga 95797
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 1112 bits (561), Expect = 0.0 Identities = 581/585 (99%), Gaps = 2/585 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 31507848 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 31507905 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 31507906 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 31507965 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31507966 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 31508025 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508026 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 31508085 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508086 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 31508145 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 31508146 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 31508205 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508206 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 31508265 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508266 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 31508325 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508326 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 31508385 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaacgga 585 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31508386 aatgagccggcgactcataggcagtggcttggttaagggaacgga 31508430
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 1112 bits (561), Expect = 0.0 Identities = 581/585 (99%), Gaps = 2/585 (0%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 84748 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 84691 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 84690 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 84631 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84630 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 84571 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84570 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 84511 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84510 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 84451 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 84450 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 84391 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84390 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 84331 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84330 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 84271 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84270 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 84211 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaacgga 585 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 84210 aatgagccggcgactcataggcagtggcttggttaagggaacgga 84166
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 1112 bits (561), Expect = 0.0 Identities = 581/585 (99%), Gaps = 2/585 (0%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 119855 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 119798 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 119797 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 119738 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119737 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 119678 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119677 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 119618 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119617 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 119558 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 119557 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 119498 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119497 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 119438 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119437 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 119378 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119377 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 119318 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaacgga 585 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119317 aatgagccggcgactcataggcagtggcttggttaagggaacgga 119273 Score = 1112 bits (561), Expect = 0.0 Identities = 581/585 (99%), Gaps = 2/585 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 95263 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 95320 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 95321 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 95380 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95381 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 95440 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95441 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 95500 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95501 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 95560 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 95561 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 95620 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95621 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 95680 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95681 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 95740 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95741 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 95800 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaacgga 585 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95801 aatgagccggcgactcataggcagtggcttggttaagggaacgga 95845
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 1112 bits (561), Expect = 0.0 Identities = 581/585 (99%), Gaps = 2/585 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 122312 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 122369 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 122370 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 122429 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122430 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 122489 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122490 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 122549 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122550 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 122609 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 122610 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 122669 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122670 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 122729 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122730 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 122789 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122790 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 122849 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaacgga 585 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122850 aatgagccggcgactcataggcagtggcttggttaagggaacgga 122894 Score = 1104 bits (557), Expect = 0.0 Identities = 580/585 (99%), Gaps = 2/585 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 14037 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 14094 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 14095 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 14154 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14155 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 14214 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14215 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 14274 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14275 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 14334 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 14335 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcct 14394 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14395 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 14454 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14455 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 14514 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14515 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 14574 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaacgga 585 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14575 aatgagccggcgactcataggcagtggcttggttaagggaacgga 14619
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 1112 bits (561), Expect = 0.0 Identities = 581/585 (99%), Gaps = 2/585 (0%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 58574 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 58517 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 58516 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 58457 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58456 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 58397 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58396 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 58337 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58336 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 58277 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 58276 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 58217 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58216 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 58157 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58156 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 58097 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58096 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 58037 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaacgga 585 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58036 aatgagccggcgactcataggcagtggcttggttaagggaacgga 57992
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 1112 bits (561), Expect = 0.0 Identities = 581/585 (99%), Gaps = 2/585 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 9268197 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 9268254 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 9268255 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 9268314 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268315 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 9268374 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268375 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 9268434 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268435 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 9268494 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 9268495 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 9268554 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268555 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 9268614 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268615 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 9268674 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268675 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 9268734 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaacgga 585 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9268735 aatgagccggcgactcataggcagtggcttggttaagggaacgga 9268779 Score = 1112 bits (561), Expect = 0.0 Identities = 581/585 (99%), Gaps = 2/585 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 9227697 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 9227754 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 9227755 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 9227814 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227815 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 9227874 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227875 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 9227934 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9227935 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 9227994 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 9227995 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 9228054 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228055 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 9228114 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228115 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 9228174 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228175 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 9228234 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaacgga 585 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9228235 aatgagccggcgactcataggcagtggcttggttaagggaacgga 9228279 Score = 1112 bits (561), Expect = 0.0 Identities = 581/585 (99%), Gaps = 2/585 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 9164286 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 9164343 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 9164344 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 9164403 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164404 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 9164463 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164464 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 9164523 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164524 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 9164583 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 9164584 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 9164643 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164644 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 9164703 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164704 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 9164763 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164764 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 9164823 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaacgga 585 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9164824 aatgagccggcgactcataggcagtggcttggttaagggaacgga 9164868 Score = 1104 bits (557), Expect = 0.0 Identities = 580/585 (99%), Gaps = 2/585 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 9056111 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 9056168 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 9056169 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 9056228 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056229 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 9056288 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056289 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 9056348 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056349 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 9056408 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 9056409 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcct 9056468 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056469 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 9056528 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056529 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 9056588 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056589 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 9056648 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaacgga 585 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9056649 aatgagccggcgactcataggcagtggcttggttaagggaacgga 9056693 Score = 165 bits (83), Expect = 2e-37 Identities = 101/107 (94%) Strand = Plus / Minus Query: 404 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 463 |||||| |||||||||||||| || |||||||||||| |||||||||||||||||||||| Sbjct: 25171513 ggtgactgatagcgaagtagtgccatgagggaaaggtaaaaagaacccccagtgggtagt 25171454 Query: 464 gaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 510 |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 25171453 gaaatagaacatgaaaccgtgctgagctcccaagcagtggtagggga 25171407
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 1112 bits (561), Expect = 0.0 Identities = 581/585 (99%), Gaps = 2/585 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 19938182 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 19938239 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 19938240 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 19938299 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938300 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 19938359 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938360 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 19938419 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938420 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 19938479 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 19938480 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 19938539 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938540 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 19938599 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938600 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 19938659 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938660 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 19938719 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaacgga 585 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19938720 aatgagccggcgactcataggcagtggcttggttaagggaacgga 19938764 Score = 1112 bits (561), Expect = 0.0 Identities = 581/585 (99%), Gaps = 2/585 (0%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 10277249 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 10277192 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 10277191 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 10277132 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277131 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 10277072 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277071 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 10277012 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10277011 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 10276952 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 10276951 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 10276892 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276891 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 10276832 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276831 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 10276772 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276771 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 10276712 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaacgga 585 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10276711 aatgagccggcgactcataggcagtggcttggttaagggaacgga 10276667 Score = 1104 bits (557), Expect = 0.0 Identities = 580/585 (99%), Gaps = 2/585 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 10387049 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 10387106 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 10387107 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 10387166 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387167 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 10387226 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387227 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 10387286 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387287 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 10387346 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 10387347 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 10387406 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387407 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 10387466 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 10387467 tagtaccgtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacgtgaaac 10387526 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387527 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 10387586 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaacgga 585 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10387587 aatgagccggcgactcataggcagtggcttggttaagggaacgga 10387631 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 422 agtaccgtgagggaaaggtgaaaagaacccc 452 ||||||||||||||||||||||||||||||| Sbjct: 2736641 agtaccgtgagggaaaggtgaaaagaacccc 2736611 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 ttgtgctgctaggcgaagcggttgagtgc 275 ||||||| ||||| ||||||||||||||| Sbjct: 8517723 ttgtgcttctaggtgaagcggttgagtgc 8517751
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 1112 bits (561), Expect = 0.0 Identities = 581/585 (99%), Gaps = 2/585 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 31598364 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 31598421 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 31598422 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 31598481 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598482 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 31598541 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598542 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 31598601 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598602 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 31598661 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 31598662 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 31598721 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598722 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 31598781 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598782 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 31598841 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598842 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 31598901 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaacgga 585 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31598902 aatgagccggcgactcataggcagtggcttggttaagggaacgga 31598946
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 1112 bits (561), Expect = 0.0 Identities = 581/585 (99%), Gaps = 2/585 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 33525680 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 33525737 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 33525738 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 33525797 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525798 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 33525857 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525858 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 33525917 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33525918 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 33525977 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 33525978 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 33526037 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526038 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 33526097 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526098 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 33526157 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526158 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 33526217 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaacgga 585 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33526218 aatgagccggcgactcataggcagtggcttggttaagggaacgga 33526262 Score = 301 bits (152), Expect = 1e-78 Identities = 158/160 (98%) Strand = Plus / Minus Query: 426 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 485 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 16678101 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 16678042 Query: 486 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 545 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 16678041 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 16677982 Query: 546 gccggcgactcataggcagtggcttggttaagggaacgga 585 |||||||||||||||||||||||||||||||||||||||| Sbjct: 16677981 gccggcgactcataggcagtggcttggttaagggaacgga 16677942 Score = 194 bits (98), Expect = 2e-46 Identities = 107/110 (97%) Strand = Plus / Minus Query: 440 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 499 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 32744772 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 32744713 Query: 500 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 549 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 32744712 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 32744663 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 406 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 452 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33538588 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33538634 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 406 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 452 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 33499956 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 33500002 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 433 ggaaaggtgaaaagaacccccagtgggtagtgaaataga 471 |||||||||||||||||||| ||| |||||||||||||| Sbjct: 37705382 ggaaaggtgaaaagaacccctagtaggtagtgaaataga 37705420 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 2 agggcgtagcaagcgacgaaatgcttc 28 ||||| ||||||||||||||||||||| Sbjct: 19455170 agggcatagcaagcgacgaaatgcttc 19455196
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 1112 bits (561), Expect = 0.0 Identities = 581/585 (99%), Gaps = 2/585 (0%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 47861 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 47804 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 47803 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 47744 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47743 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 47684 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47683 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 47624 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47623 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 47564 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 47563 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 47504 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47503 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 47444 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47443 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 47384 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47383 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 47324 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaacgga 585 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 47323 aatgagccggcgactcataggcagtggcttggttaagggaacgga 47279
>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0557A01 Length = 147201 Score = 1112 bits (561), Expect = 0.0 Identities = 581/585 (99%), Gaps = 2/585 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 70877 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 70934 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 70935 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 70994 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70995 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 71054 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71055 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 71114 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71115 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 71174 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 71175 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 71234 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71235 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 71294 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71295 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 71354 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71355 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 71414 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaacgga 585 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71415 aatgagccggcgactcataggcagtggcttggttaagggaacgga 71459 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 406 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 452 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 83785 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 83831 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 406 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 452 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 45153 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 45199
>dbj|AK106979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-H06, full insert sequence Length = 1684 Score = 1112 bits (561), Expect = 0.0 Identities = 581/585 (99%), Gaps = 2/585 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 49 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 106 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 107 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 166 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 167 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 226 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 227 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 286 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 287 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 346 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 347 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 406 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 407 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 466 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 467 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 526 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 527 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 586 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaacgga 585 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 587 aatgagccggcgactcataggcagtggcttggttaagggaacgga 631
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 1112 bits (561), Expect = 0.0 Identities = 581/585 (99%), Gaps = 2/585 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 19949458 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 19949515 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 19949516 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 19949575 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949576 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 19949635 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949636 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 19949695 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949696 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 19949755 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 19949756 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 19949815 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949816 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 19949875 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949876 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 19949935 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949936 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 19949995 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaacgga 585 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19949996 aatgagccggcgactcataggcagtggcttggttaagggaacgga 19950040 Score = 1112 bits (561), Expect = 0.0 Identities = 581/585 (99%), Gaps = 2/585 (0%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 10283288 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 10283231 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 10283230 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 10283171 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283170 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 10283111 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283110 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 10283051 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10283050 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 10282991 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 10282990 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 10282931 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282930 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 10282871 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282870 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 10282811 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282810 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 10282751 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaacgga 585 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10282750 aatgagccggcgactcataggcagtggcttggttaagggaacgga 10282706 Score = 1104 bits (557), Expect = 0.0 Identities = 580/585 (99%), Gaps = 2/585 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 10393088 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 10393145 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 10393146 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 10393205 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393206 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 10393265 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393266 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 10393325 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393326 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 10393385 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 10393386 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 10393445 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393446 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 10393505 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 10393506 tagtaccgtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacgtgaaac 10393565 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393566 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 10393625 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaacgga 585 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10393626 aatgagccggcgactcataggcagtggcttggttaagggaacgga 10393670 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 406 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 452 ||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 2736608 tgaccgatagcatacaagtaccgtgagggaaaggtgaaaagaacccc 2736562 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 ttgtgctgctaggcgaagcggttgagtgc 275 ||||||| ||||| ||||||||||||||| Sbjct: 8522822 ttgtgcttctaggtgaagcggttgagtgc 8522850
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 1112 bits (561), Expect = 0.0 Identities = 581/585 (99%), Gaps = 2/585 (0%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 119829 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 119772 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 119771 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 119712 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119711 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 119652 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119651 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 119592 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119591 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 119532 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 119531 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 119472 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119471 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 119412 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119411 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 119352 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119351 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 119292 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaacgga 585 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 119291 aatgagccggcgactcataggcagtggcttggttaagggaacgga 119247 Score = 1112 bits (561), Expect = 0.0 Identities = 581/585 (99%), Gaps = 2/585 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 95210 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 95267 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 95268 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 95327 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95328 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 95387 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95388 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 95447 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95448 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 95507 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 95508 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 95567 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95568 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 95627 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95628 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 95687 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95688 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 95747 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaacgga 585 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95748 aatgagccggcgactcataggcagtggcttggttaagggaacgga 95792
>dbj|AK059835.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-C02, full insert sequence Length = 1395 Score = 1108 bits (559), Expect = 0.0 Identities = 579/583 (99%), Gaps = 2/583 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 46 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 103 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 104 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 163 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 223 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 224 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 283 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 284 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 343 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 344 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 403 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 404 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 463 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 464 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 523 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 524 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 583 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaacg 583 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 584 aatgagccggcgactcataggcagtggcttggttaagggaacg 626
>gb|DQ490949.1| Festuca arundinacea 23S ribosomal RNA gene, partial sequence; chloroplast Length = 982 Score = 1104 bits (557), Expect = 0.0 Identities = 577/581 (99%), Gaps = 2/581 (0%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 932 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 875 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 874 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 815 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 814 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 755 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 754 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 695 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 694 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 635 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 634 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 575 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 574 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 515 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 514 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 455 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 454 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 395 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaa 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 394 aatgagccggcgactcataggcagtggcttggttaagggaa 354
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 1104 bits (557), Expect = 0.0 Identities = 580/585 (99%), Gaps = 2/585 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 140845 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 140902 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 140903 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 140962 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140963 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 141022 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141023 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 141082 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141083 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 141142 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 141143 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcct 141202 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141203 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 141262 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141263 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 141322 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141323 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 141382 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaacgga 585 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141383 aatgagccggcgactcataggcagtggcttggttaagggaacgga 141427
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 1104 bits (557), Expect = 0.0 Identities = 580/585 (99%), Gaps = 2/585 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 93441 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 93498 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 93499 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 93558 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93559 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 93618 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93619 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 93678 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93679 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 93738 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 93739 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 93798 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93799 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 93858 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 93859 tagtaccgtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacgtgaaac 93918 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93919 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 93978 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaacgga 585 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 93979 aatgagccggcgactcataggcagtggcttggttaagggaacgga 94023
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 1104 bits (557), Expect = 0.0 Identities = 577/581 (99%), Gaps = 2/581 (0%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 44846 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 44789 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 44788 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 44729 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44728 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 44669 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44668 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 44609 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44608 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 44549 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 44548 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 44489 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44488 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 44429 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44428 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 44369 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 44368 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 44309 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaa 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 44308 aatgagccggcgactcataggcagtggcttggttaagggaa 44268 Score = 1104 bits (557), Expect = 0.0 Identities = 577/581 (99%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 20272 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 20329 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 20330 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 20389 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20390 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 20449 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20450 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 20509 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20510 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 20569 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 20570 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 20629 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20630 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 20689 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20690 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 20749 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20750 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 20809 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaa 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 20810 aatgagccggcgactcataggcagtggcttggttaagggaa 20850
>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence; tRNA-Ala (trnA) gene, complete sequence; hypothetical protein gene, complete cds; ACR pseudogene, complete sequence; tRNA-Ile (trnI) gene, partial sequence; and ORF72 pseudogene, partial sequence; chloroplast genes for chloroplast products Length = 3026 Score = 1104 bits (557), Expect = 0.0 Identities = 577/581 (99%), Gaps = 2/581 (0%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1475 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 1418 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1417 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 1358 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1357 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 1298 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1297 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 1238 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1237 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 1178 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1177 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 1118 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1117 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 1058 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1057 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 998 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 997 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 938 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaa 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 937 aatgagccggcgactcataggcagtggcttggttaagggaa 897
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 1104 bits (557), Expect = 0.0 Identities = 580/585 (99%), Gaps = 2/585 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 27505 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 27562 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 27563 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 27622 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27623 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 27682 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27683 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 27742 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27743 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 27802 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 27803 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 27862 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27863 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 27922 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 27923 tagtaccgtgagggaaaggtgagaagaacccccagtgggtagtgaaatagaacgtgaaac 27982 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27983 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 28042 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaacgga 585 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28043 aatgagccggcgactcataggcagtggcttggttaagggaacgga 28087
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 1104 bits (557), Expect = 0.0 Identities = 577/581 (99%), Gaps = 2/581 (0%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 123685 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 123628 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 123627 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 123568 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123567 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 123508 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123507 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 123448 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123447 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 123388 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 123387 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 123328 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123327 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 123268 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123267 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 123208 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123207 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 123148 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaa 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 123147 aatgagccggcgactcataggcagtggcttggttaagggaa 123107 Score = 1104 bits (557), Expect = 0.0 Identities = 577/581 (99%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 99152 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 99209 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 99210 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 99269 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99270 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 99329 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99330 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 99389 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99390 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 99449 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 99450 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 99509 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99510 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 99569 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99570 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 99629 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99630 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 99689 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaa 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 99690 aatgagccggcgactcataggcagtggcttggttaagggaa 99730
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 1104 bits (557), Expect = 0.0 Identities = 577/581 (99%), Gaps = 2/581 (0%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 124402 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 124345 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 124344 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 124285 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124284 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 124225 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124224 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 124165 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124164 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 124105 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 124104 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 124045 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124044 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 123985 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123984 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 123925 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123924 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 123865 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaa 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 123864 aatgagccggcgactcataggcagtggcttggttaagggaa 123824 Score = 1104 bits (557), Expect = 0.0 Identities = 577/581 (99%), Gaps = 2/581 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 99829 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 99886 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 99887 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 99946 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99947 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 100006 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100007 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 100066 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100067 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 100126 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 100127 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 100186 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100187 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 100246 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100247 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 100306 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 100307 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 100366 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaa 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 100367 aatgagccggcgactcataggcagtggcttggttaagggaa 100407
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 1096 bits (553), Expect = 0.0 Identities = 579/585 (98%), Gaps = 2/585 (0%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 9242084 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 9242027 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 9242026 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 9241967 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241966 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 9241907 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241906 tagcagcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 9241847 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241846 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 9241787 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 9241786 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 9241727 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241726 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 9241667 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241666 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 9241607 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9241606 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 9241547 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaacgga 585 ||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 9241546 aatgagctggcgactcataggcagtggcttggttaagggaacgga 9241502 Score = 67.9 bits (34), Expect = 4e-08 Identities = 34/34 (100%) Strand = Plus / Minus Query: 129 actgaaacatcttagtagccagaggaaaagaaag 162 |||||||||||||||||||||||||||||||||| Sbjct: 10177929 actgaaacatcttagtagccagaggaaaagaaag 10177896
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 1096 bits (553), Expect = 0.0 Identities = 579/585 (98%), Gaps = 2/585 (0%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 53297 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 53240 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 53239 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 53180 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53179 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 53120 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53119 tagcagcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 53060 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53059 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 53000 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 52999 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 52940 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52939 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 52880 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52879 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 52820 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 52819 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 52760 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaacgga 585 ||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 52759 aatgagctggcgactcataggcagtggcttggttaagggaacgga 52715
>dbj|AK111158.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-176-H09, full insert sequence Length = 3614 Score = 1090 bits (550), Expect = 0.0 Identities = 576/582 (98%), Gaps = 2/582 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 6 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 63 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 64 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 123 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 183 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 184 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcagta 243 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 303 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 304 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 363 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 423 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 424 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 483 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 484 cgtgctgagctcccaagcagtgggaggggaaattgatctctgaccgcgtgcctgttgaag 543 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaac 582 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 544 aatgagccggcgactcataggcagtggcttggttaagggaac 585
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 1051 bits (530), Expect = 0.0 Identities = 569/578 (98%), Gaps = 3/578 (0%) Strand = Plus / Minus Query: 4 ggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagnatt 63 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| Sbjct: 123621 ggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag-att 123564 Query: 64 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacct 123 |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 123563 cccaaataggtcaaccttttgaactgcctgccgaatccatgagcaggcaagagacaacct 123504 Query: 124 ggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123503 ggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtag 123444 Query: 184 cggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaa 243 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 123443 cggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggtgagcaatacaa 123384 Query: 244 gcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtag 303 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 123383 gcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctatagtccagtag 123324 Query: 304 ccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtg 363 |||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 123323 ccgatagcatcact-gcttacgctctgacccgagtagcatggggcacgtggaatcccgtg 123265 Query: 364 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtag 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123264 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtag 123205 Query: 424 taccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgt 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123204 taccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgt 123145 Query: 484 gctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaat 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123144 gctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaat 123085 Query: 544 gagccggcgactcataggcagtggcttggttaagggaa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 123084 gagccggcgactcataggcagtggcttggttaagggaa 123047 Score = 1051 bits (530), Expect = 0.0 Identities = 569/578 (98%), Gaps = 3/578 (0%) Strand = Plus / Plus Query: 4 ggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagnatt 63 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| Sbjct: 99116 ggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag-att 99173 Query: 64 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacct 123 |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 99174 cccaaataggtcaaccttttgaactgcctgccgaatccatgagcaggcaagagacaacct 99233 Query: 124 ggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99234 ggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtag 99293 Query: 184 cggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaa 243 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 99294 cggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggtgagcaatacaa 99353 Query: 244 gcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtag 303 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 99354 gcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctatagtccagtag 99413 Query: 304 ccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtg 363 |||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 99414 ccgatagcatcact-gcttacgctctgacccgagtagcatggggcacgtggaatcccgtg 99472 Query: 364 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtag 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99473 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtag 99532 Query: 424 taccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgt 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99533 taccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgt 99592 Query: 484 gctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaat 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 99593 gctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaat 99652 Query: 544 gagccggcgactcataggcagtggcttggttaagggaa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 99653 gagccggcgactcataggcagtggcttggttaagggaa 99690
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 1051 bits (530), Expect = 0.0 Identities = 569/578 (98%), Gaps = 3/578 (0%) Strand = Plus / Plus Query: 4 ggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagnatt 63 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| Sbjct: 5469 ggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag-att 5526 Query: 64 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacct 123 |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 5527 cccaaataggtcaaccttttgaactgcctgccgaatccatgagcaggcaagagacaacct 5586 Query: 124 ggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5587 ggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtag 5646 Query: 184 cggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaa 243 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 5647 cggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggtgagcaatacaa 5706 Query: 244 gcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtag 303 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 5707 gcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctatagtccagtag 5766 Query: 304 ccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtg 363 |||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 5767 ccgatagcatcact-gcttacgctctgacccgagtagcatggggcacgtggaatcccgtg 5825 Query: 364 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtag 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5826 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtag 5885 Query: 424 taccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgt 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5886 taccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgt 5945 Query: 484 gctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaat 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5946 gctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaat 6005 Query: 544 gagccggcgactcataggcagtggcttggttaagggaa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 6006 gagccggcgactcataggcagtggcttggttaagggaa 6043
>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA Length = 3079 Score = 1051 bits (530), Expect = 0.0 Identities = 569/578 (98%), Gaps = 3/578 (0%) Strand = Plus / Plus Query: 4 ggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagnatt 63 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| Sbjct: 57 ggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag-att 114 Query: 64 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacct 123 |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 115 cccaaataggtcaaccttttgaactgcctgccgaatccatgagcaggcaagagacaacct 174 Query: 124 ggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtag 183 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 175 ggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtag 234 Query: 184 cggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaa 243 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 235 cggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggtgagcaatacaa 294 Query: 244 gcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtag 303 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 295 gcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctatagtccagtag 354 Query: 304 ccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtg 363 |||| ||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 355 ccgatagcatcact-gcttacgctctgacccgagtagcatggggcacgtggaatcccgtg 413 Query: 364 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtag 423 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 414 tgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtag 473 Query: 424 taccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgt 483 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 474 taccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgt 533 Query: 484 gctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaat 543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 534 gctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaat 593 Query: 544 gagccggcgactcataggcagtggcttggttaagggaa 581 |||||||||||||||||||||||||||||||||||||| Sbjct: 594 gagccggcgactcataggcagtggcttggttaagggaa 631
>dbj|AK104167.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-D12, full insert sequence Length = 1223 Score = 1037 bits (523), Expect = 0.0 Identities = 536/539 (99%), Gaps = 1/539 (0%) Strand = Plus / Plus Query: 47 catagatccggagnattcccaaataggtcaaccttttaaactgcctgctgaatccatgag 106 ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 1 catagatccggag-attcccaaataggtcaaccttttgaactgcctgctgaatccatgag 59 Query: 107 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 caggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 119 Query: 167 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 agcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggtt 179 Query: 227 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 180 gtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctaga 239 Query: 287 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 346 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 240 tggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggg 299 Query: 347 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 359 Query: 407 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 gaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaa 419 Query: 467 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 420 atagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccg 479 Query: 527 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 585 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 480 cgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 538
>dbj|AK105837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F02, full insert sequence Length = 1822 Score = 1021 bits (515), Expect = 0.0 Identities = 531/535 (99%), Gaps = 1/535 (0%) Strand = Plus / Plus Query: 51 gatccggagnattcccaaataggtcaaccttttaaactgcctgctgaatccatgagcagg 110 ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1 gatccggag-attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcagg 59 Query: 111 caagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcg 170 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 caagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcg 119 Query: 171 attcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgg 230 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 attcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgg 179 Query: 231 gagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggc 290 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 180 gagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggc 239 Query: 291 taaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcac 350 |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 240 taaagtccagtagccgaaagcatcgctagcttacgctctgacccgagtagcatggggcac 299 Query: 351 gtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgacc 410 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 gtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgacc 359 Query: 411 gatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatag 470 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 gatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatag 419 Query: 471 aacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtg 530 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 420 aacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtg 479 Query: 531 cctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 585 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 480 cctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 534
>dbj|AK060204.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-H12, full insert sequence Length = 1872 Score = 963 bits (486), Expect = 0.0 Identities = 489/490 (99%) Strand = Plus / Plus Query: 85 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagt 60 Query: 145 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 agccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcag 120 Query: 205 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 cctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaag 180 Query: 265 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttat 324 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 cggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttac 240 Query: 325 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 300 Query: 385 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 360 Query: 445 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 420 Query: 505 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcag 564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcag 480 Query: 565 tggcttggtt 574 |||||||||| Sbjct: 481 tggcttggtt 490
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 928 bits (468), Expect = 0.0 Identities = 557/582 (95%), Gaps = 6/582 (1%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 139535 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 139478 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 139477 attcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 139419 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139418 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 139359 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139358 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 139299 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 ||||||| |||||||||||||||||||| |||| | |||||||||||||| | ||||||| Sbjct: 139298 caagcgtcgtgctgctaggcgaagcggtggagtactgcaccctagatggcgagagtccag 139239 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 139238 tagccgaaagcatcactggcttacgctctgacccgagtagcatggggcacgtggaatccc 139179 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139178 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 139119 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 139118 tagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 139059 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 || |||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 139058 cg---tgagctcccaagcagtgggaggagaatttgatctctgaccgcgtgcctgttgaag 139002 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaac 582 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 139001 aatgagccggcgactcataggcagtggcttggttaagggaac 138960 Score = 928 bits (468), Expect = 0.0 Identities = 557/582 (95%), Gaps = 6/582 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 110410 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 110467 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 110468 attcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 110526 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110527 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 110586 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110587 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 110646 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 ||||||| |||||||||||||||||||| |||| | |||||||||||||| | ||||||| Sbjct: 110647 caagcgtcgtgctgctaggcgaagcggtggagtactgcaccctagatggcgagagtccag 110706 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 110707 tagccgaaagcatcactggcttacgctctgacccgagtagcatggggcacgtggaatccc 110766 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110767 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 110826 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 110827 tagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 110886 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 || |||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 110887 cg---tgagctcccaagcagtgggaggagaatttgatctctgaccgcgtgcctgttgaag 110943 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaac 582 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 110944 aatgagccggcgactcataggcagtggcttggttaagggaac 110985
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 928 bits (468), Expect = 0.0 Identities = 557/582 (95%), Gaps = 6/582 (1%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 134172 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 134115 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 134114 attcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 134056 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134055 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 133996 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133995 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 133936 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 ||||||| ||||||||||||||||| || || ||| |||||||||||||| | ||||||| Sbjct: 133935 caagcgtcgtgctgctaggcgaagcagtggaatgctgcaccctagatggcgagagtccag 133876 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 133875 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 133816 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133815 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 133756 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 133755 tagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 133696 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 || | |||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 133695 cg---taagctcccaagcagtgggaggagaatgtgatctctgaccgcgtgcctgttgaag 133639 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaac 582 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 133638 aatgagccggcgactcataggcagtggcttggttaagggaac 133597 Score = 928 bits (468), Expect = 0.0 Identities = 557/582 (95%), Gaps = 6/582 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 103799 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 103856 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 103857 attcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 103915 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103916 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 103975 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103976 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 104035 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 ||||||| ||||||||||||||||| || || ||| |||||||||||||| | ||||||| Sbjct: 104036 caagcgtcgtgctgctaggcgaagcagtggaatgctgcaccctagatggcgagagtccag 104095 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 104096 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 104155 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104156 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 104215 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 104216 tagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 104275 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 || | |||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 104276 cg---taagctcccaagcagtgggaggagaatgtgatctctgaccgcgtgcctgttgaag 104332 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaac 582 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 104333 aatgagccggcgactcataggcagtggcttggttaagggaac 104374
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 926 bits (467), Expect = 0.0 Identities = 556/581 (95%), Gaps = 6/581 (1%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 127813 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 127756 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 127755 attcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 127697 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 127696 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccatag 127637 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127636 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 127577 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 ||||||| ||||||||||||||||||| |||||| |||||||||||||| | ||||||| Sbjct: 127576 caagcgtcatgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccag 127517 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 127516 tagccgaaaacatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 127457 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 127456 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 127397 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 127396 tagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 127337 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 || |||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 127336 cg---tgagctcccaagcagtgggaggagaatgtgatctctgaccgcgtgcctgttgaag 127280 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaa 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 127279 aatgagccggcgactcataggcagtggcttggttaagggaa 127239 Score = 926 bits (467), Expect = 0.0 Identities = 556/581 (95%), Gaps = 6/581 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 107109 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 107166 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 107167 attcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 107225 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 107226 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccatag 107285 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107286 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 107345 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 ||||||| ||||||||||||||||||| |||||| |||||||||||||| | ||||||| Sbjct: 107346 caagcgtcatgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccag 107405 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 107406 tagccgaaaacatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 107465 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107466 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 107525 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 107526 tagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 107585 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 || |||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 107586 cg---tgagctcccaagcagtgggaggagaatgtgatctctgaccgcgtgcctgttgaag 107642 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaa 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 107643 aatgagccggcgactcataggcagtggcttggttaagggaa 107683
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 912 bits (460), Expect = 0.0 Identities = 555/582 (95%), Gaps = 6/582 (1%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 142057 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 142000 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||| ||||||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 141999 attcccgaatgggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 141941 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141940 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 141881 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 141880 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 141821 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 ||||||| ||||||||||||||||||||||||| | |||||||||||||| | ||||||| Sbjct: 141820 caagcgtcgtgctgctaggcgaagcggttgagtactgcaccctagatggcgagagtccag 141761 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 || |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 141760 taaccgaaagcatcactggcttacgctctgacccgagtagcatggggcacgtggaatccc 141701 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 141700 gtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcgaag 141641 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 141640 tagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 141581 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 || |||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 141580 cg---tgagctcccaagcagtgggaggagaatttgatctctgaccgcgtgcctgttgaag 141524 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaac 582 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 141523 aatgagccggcgactcataggcagtggcttggttaagggaac 141482 Score = 912 bits (460), Expect = 0.0 Identities = 555/582 (95%), Gaps = 6/582 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 111600 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 111657 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||| ||||||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 111658 attcccgaatgggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 111716 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111717 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 111776 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111777 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 111836 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 ||||||| ||||||||||||||||||||||||| | |||||||||||||| | ||||||| Sbjct: 111837 caagcgtcgtgctgctaggcgaagcggttgagtactgcaccctagatggcgagagtccag 111896 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 || |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct: 111897 taaccgaaagcatcactggcttacgctctgacccgagtagcatggggcacgtggaatccc 111956 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 111957 gtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcgaag 112016 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 112017 tagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 112076 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 || |||||||||||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 112077 cg---tgagctcccaagcagtgggaggagaatttgatctctgaccgcgtgcctgttgaag 112133 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaac 582 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 112134 aatgagccggcgactcataggcagtggcttggttaagggaac 112175
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 902 bits (455), Expect = 0.0 Identities = 554/582 (95%), Gaps = 10/582 (1%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 134930 aagggcgtagtaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 134873 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 134872 attcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 134814 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134813 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 134754 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134753 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 134694 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 ||||||| ||||||||||||||||| || |||||| |||||||||||||||| ||||||| Sbjct: 134693 caagcgtcgtgctgctaggcgaagcagtggagtgctgcaccctagatggctagagtccag 134634 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||| Sbjct: 134633 tagccgaaagcatcactagcttacgttctaacccgagtagcatggggcacgtggaatccc 134574 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134573 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 134514 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 134513 tagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 134454 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 || |||||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 134453 cg---tgagctcccaagcagtgggaggagaa----atctctgaccgcgtgcctgttgaag 134401 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaac 582 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 134400 aatgagccggcgactcataggcagtggcttggttaagggaac 134359 Score = 902 bits (455), Expect = 0.0 Identities = 554/582 (95%), Gaps = 10/582 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 105352 aagggcgtagtaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 105409 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 105410 attcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 105468 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105469 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 105528 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105529 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 105588 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 ||||||| ||||||||||||||||| || |||||| |||||||||||||||| ||||||| Sbjct: 105589 caagcgtcgtgctgctaggcgaagcagtggagtgctgcaccctagatggctagagtccag 105648 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||| Sbjct: 105649 tagccgaaagcatcactagcttacgttctaacccgagtagcatggggcacgtggaatccc 105708 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105709 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 105768 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 105769 tagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 105828 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 || |||||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 105829 cg---tgagctcccaagcagtgggaggagaa----atctctgaccgcgtgcctgttgaag 105881 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaac 582 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 105882 aatgagccggcgactcataggcagtggcttggttaagggaac 105923
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 898 bits (453), Expect = 0.0 Identities = 554/582 (95%), Gaps = 8/582 (1%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 136540 aagggcgtagtaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 136483 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||| Sbjct: 136482 attcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaa 136424 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136423 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 136364 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136363 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 136304 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 ||||||| |||||||||||||||||||| |||||| |||||||||||||| | ||||||| Sbjct: 136303 caagcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccag 136244 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 136243 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 136184 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136183 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 136124 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 136123 tagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 136064 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 || | |||||||||||||||||||| | || | ||||||||||||||||||||||| Sbjct: 136063 cg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaag 136009 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaac 582 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 136008 aatgagccggcgactcataggcagtggcttggttaagggaac 135967 Score = 898 bits (453), Expect = 0.0 Identities = 554/582 (95%), Gaps = 8/582 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 105885 aagggcgtagtaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 105942 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||| Sbjct: 105943 attcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaa 106001 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106002 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 106061 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106062 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 106121 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 ||||||| |||||||||||||||||||| |||||| |||||||||||||| | ||||||| Sbjct: 106122 caagcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccag 106181 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 106182 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 106241 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106242 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 106301 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 106302 tagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 106361 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 || | |||||||||||||||||||| | || | ||||||||||||||||||||||| Sbjct: 106362 cg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaag 106416 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaac 582 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 106417 aatgagccggcgactcataggcagtggcttggttaagggaac 106458
>dbj|AK105328.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-A07, full insert sequence Length = 1055 Score = 882 bits (445), Expect = 0.0 Identities = 465/469 (99%), Gaps = 2/469 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 50 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 107 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 108 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 167 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 168 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 227 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 228 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 287 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 288 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 347 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 348 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 407 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 408 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 467 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 469 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 468 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 516
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 880 bits (444), Expect = 0.0 Identities = 552/582 (94%), Gaps = 7/582 (1%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 132724 aagggcgtagtaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 132667 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||| ||||||| ||||||| ||||||||||||| ||||||||||||||| Sbjct: 132666 attcccgaataggttaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaa 132608 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132607 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 132548 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132547 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 132488 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 ||||||| ||||||||||||||||| || || ||| |||||||||||||| ||||||||| Sbjct: 132487 caagcgtcgtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaagtccag 132428 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132427 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 132368 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132367 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 132308 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 132307 tagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 132248 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 || | |||||||||||||||||||| | | | ||||||||||||||||||||||| Sbjct: 132247 cg---taagctcccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaag 132192 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaac 582 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 132191 aatgagccggcgactcataggcagtggcttggttaagggaac 132150 Score = 880 bits (444), Expect = 0.0 Identities = 552/582 (94%), Gaps = 7/582 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 104154 aagggcgtagtaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 104211 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||| ||||||| ||||||| ||||||||||||| ||||||||||||||| Sbjct: 104212 attcccgaataggttaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaa 104270 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104271 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 104330 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104331 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 104390 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 ||||||| ||||||||||||||||| || || ||| |||||||||||||| ||||||||| Sbjct: 104391 caagcgtcgtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaagtccag 104450 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104451 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 104510 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104511 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 104570 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 104571 tagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 104630 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 || | |||||||||||||||||||| | | | ||||||||||||||||||||||| Sbjct: 104631 cg---taagctcccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaag 104686 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaac 582 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 104687 aatgagccggcgactcataggcagtggcttggttaagggaac 104728
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 880 bits (444), Expect = 0.0 Identities = 552/582 (94%), Gaps = 7/582 (1%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 132947 aagggcgtagtaagcgacgaaatgcttcgggg-agttgaaaataagcgtagatccggag- 132890 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||| |||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 132889 attcccgaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaagagacaa 132831 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132830 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 132771 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132770 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 132711 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||| |||||||||||||||||||| ||||||||||||||||||||| | ||||||| Sbjct: 132710 aaagcgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtccag 132651 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132650 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 132591 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132590 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 132531 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 132530 tagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 132471 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 || | |||||||||||||||||||| | || ||||||||||||||||||||||| Sbjct: 132470 cg---taagctcccaagcagtgggaggag-ccctgggctctgaccgcgtgcctgttgaag 132415 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaac 582 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 132414 aatgagccggcgactcataggcagtggcttggttaagggaac 132373 Score = 880 bits (444), Expect = 0.0 Identities = 552/582 (94%), Gaps = 7/582 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 103817 aagggcgtagtaagcgacgaaatgcttcgggg-agttgaaaataagcgtagatccggag- 103874 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||| |||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 103875 attcccgaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaagagacaa 103933 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103934 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 103993 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103994 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 104053 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||| |||||||||||||||||||| ||||||||||||||||||||| | ||||||| Sbjct: 104054 aaagcgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtccag 104113 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104114 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 104173 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104174 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 104233 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 104234 tagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 104293 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 || | |||||||||||||||||||| | || ||||||||||||||||||||||| Sbjct: 104294 cg---taagctcccaagcagtgggaggag-ccctgggctctgaccgcgtgcctgttgaag 104349 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaac 582 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 104350 aatgagccggcgactcataggcagtggcttggttaagggaac 104391
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 880 bits (444), Expect = 0.0 Identities = 552/582 (94%), Gaps = 7/582 (1%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 132717 aagggcgtagtaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 132660 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||| ||||||| ||||||| ||||||||||||| ||||||||||||||| Sbjct: 132659 attcccgaataggttaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaa 132601 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132600 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 132541 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132540 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 132481 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 ||||||| ||||||||||||||||| || || ||| |||||||||||||| ||||||||| Sbjct: 132480 caagcgtcgtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaagtccag 132421 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132420 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 132361 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132360 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 132301 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 132300 tagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 132241 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 || | |||||||||||||||||||| | | | ||||||||||||||||||||||| Sbjct: 132240 cg---taagctcccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaag 132185 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaac 582 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 132184 aatgagccggcgactcataggcagtggcttggttaagggaac 132143 Score = 880 bits (444), Expect = 0.0 Identities = 552/582 (94%), Gaps = 7/582 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 104152 aagggcgtagtaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 104209 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||| ||||||| ||||||| ||||||||||||| ||||||||||||||| Sbjct: 104210 attcccgaataggttaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaa 104268 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104269 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 104328 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104329 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 104388 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 ||||||| ||||||||||||||||| || || ||| |||||||||||||| ||||||||| Sbjct: 104389 caagcgtcgtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaagtccag 104448 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104449 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 104508 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104509 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 104568 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 104569 tagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 104628 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 || | |||||||||||||||||||| | | | ||||||||||||||||||||||| Sbjct: 104629 cg---taagctcccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaag 104684 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaac 582 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 104685 aatgagccggcgactcataggcagtggcttggttaagggaac 104726
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 872 bits (440), Expect = 0.0 Identities = 551/582 (94%), Gaps = 7/582 (1%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 131616 aagggcgtagtaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 131559 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||| ||||||| ||||||| ||||||||||||| ||||||||||||||| Sbjct: 131558 attcccgaataggttaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaa 131500 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131499 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 131440 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131439 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 131380 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 ||||||| ||||||||||||||||| || || ||| |||||||||||||| ||||||||| Sbjct: 131379 caagcgtcgtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaagtccag 131320 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 131319 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 131260 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131259 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 131200 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 131199 tagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 131140 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 || | |||||||||||||||||||| | | | ||||||||||||||||||||||| Sbjct: 131139 cg---taagctcccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaag 131084 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaac 582 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 131083 aatgagccggcgactcataggcagtggcttggttaagggaac 131042 Score = 872 bits (440), Expect = 0.0 Identities = 551/582 (94%), Gaps = 7/582 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 103019 aagggcgtagtaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 103076 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||| ||||||| ||||||| ||||||||||||| ||||||||||||||| Sbjct: 103077 attcccgaataggttaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaa 103135 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103136 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 103195 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103196 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 103255 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 ||||||| ||||||||||||||||| || || ||| |||||||||||||| ||||||||| Sbjct: 103256 caagcgtcgtgctgctaggcgaagcagtagaatgctgcaccctagatggcgaaagtccag 103315 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 103316 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 103375 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103376 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 103435 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 103436 tagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 103495 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 || | |||||||||||||||||||| | | | ||||||||||||||||||||||| Sbjct: 103496 cg---taagctcccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaag 103551 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaac 582 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 103552 aatgagccggcgactcataggcagtggcttggttaagggaac 103593
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 872 bits (440), Expect = 0.0 Identities = 551/582 (94%), Gaps = 7/582 (1%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 133908 aagggcgtagtaagcgacgaaatgcttcgggg-agttgaaaataagcgtagatccggag- 133851 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||| |||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 133850 attcccgaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaagagacaa 133792 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133791 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 133732 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 133731 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaaaa 133672 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||| |||||||||||||||||||| ||||||||||||||||||||| | ||||||| Sbjct: 133671 aaagcgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtccag 133612 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133611 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 133552 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 133551 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 133492 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 133491 tagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 133432 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 || | |||||||||||||||||||| | || ||||||||||||||||||||||| Sbjct: 133431 cg---taagctcccaagcagtgggaggag-ccctgggctctgaccgcgtgcctgttgaag 133376 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaac 582 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 133375 aatgagccggcgactcataggcagtggcttggttaagggaac 133334 Score = 872 bits (440), Expect = 0.0 Identities = 551/582 (94%), Gaps = 7/582 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 104741 aagggcgtagtaagcgacgaaatgcttcgggg-agttgaaaataagcgtagatccggag- 104798 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||| |||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 104799 attcccgaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaagagacaa 104857 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104858 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 104917 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 104918 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaaaa 104977 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||| |||||||||||||||||||| ||||||||||||||||||||| | ||||||| Sbjct: 104978 aaagcgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtccag 105037 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105038 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 105097 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105098 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 105157 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 105158 tagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 105217 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 || | |||||||||||||||||||| | || ||||||||||||||||||||||| Sbjct: 105218 cg---taagctcccaagcagtgggaggag-ccctgggctctgaccgcgtgcctgttgaag 105273 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaac 582 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 105274 aatgagccggcgactcataggcagtggcttggttaagggaac 105315
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 864 bits (436), Expect = 0.0 Identities = 550/582 (94%), Gaps = 7/582 (1%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 140309 aagggcgtagtaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 140252 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 140251 attcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 140193 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140192 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 140133 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 140132 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 140073 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 ||||||| ||||||||||||||||||| || ||| |||||||||||||| | ||||||| Sbjct: 140072 caagcgtcgtgctgctaggcgaagcggcggaatgctgcaccctagatggcgagagtccag 140013 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 140012 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 139953 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139952 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 139893 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 139892 tagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 139833 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 || | || ||||||||||||||||| | | | | ||||||||||||||||||||||| Sbjct: 139832 cg---taagttcccaagcagtgggaggag-acgggggctctgaccgcgtgcctgttgaag 139777 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaac 582 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 139776 aatgagccggcgactcataggcagtggcttggttaagggaac 139735 Score = 864 bits (436), Expect = 0.0 Identities = 550/582 (94%), Gaps = 7/582 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 109751 aagggcgtagtaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 109808 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 109809 attcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 109867 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109868 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 109927 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109928 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 109987 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 ||||||| ||||||||||||||||||| || ||| |||||||||||||| | ||||||| Sbjct: 109988 caagcgtcgtgctgctaggcgaagcggcggaatgctgcaccctagatggcgagagtccag 110047 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 110048 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 110107 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110108 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 110167 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 110168 tagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 110227 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 || | || ||||||||||||||||| | | | | ||||||||||||||||||||||| Sbjct: 110228 cg---taagttcccaagcagtgggaggag-acgggggctctgaccgcgtgcctgttgaag 110283 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaac 582 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 110284 aatgagccggcgactcataggcagtggcttggttaagggaac 110325
>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence Length = 1750 Score = 864 bits (436), Expect = 0.0 Identities = 550/582 (94%), Gaps = 7/582 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 50 aagggcgtagtaagcgacgaaatgcttcgggg-agttgaaaataagcgtagatccggag- 107 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||| |||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 108 attcccgaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaagagacaa 166 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 167 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 226 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 227 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaaaa 286 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||| |||||||||||||||||||| ||||||||||||||||||||| | ||||||| Sbjct: 287 aaagcgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtccag 346 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 347 tagccgagagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 406 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 407 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 466 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 467 tagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 526 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 || | |||||||||||||||||||| | || ||||||||||||||||||||||| Sbjct: 527 cg---taagctcccaagcagtgggaggag-ccctgggctctgaccgcgtgcctgttgaag 582 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaac 582 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 583 aatgagccggcgactcataggcagtggcttggttaagggaac 624
>gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2873 Score = 864 bits (436), Expect = 0.0 Identities = 550/582 (94%), Gaps = 7/582 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 59 aagggcgtagtaagcgacgaaatgcttcgggg-agttgaaaataagcgtagatccggag- 116 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||| Sbjct: 117 attcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaa 175 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 176 cctggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcccgtag 235 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 236 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 295 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 ||||||| ||||||||||||||||| || |||||| |||||||||||||| | ||||||| Sbjct: 296 caagcgtcgtgctgctaggcgaagcagtggagtgctgcaccctagatggcgagagtccag 355 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 356 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 415 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 416 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 475 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 476 tagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 535 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 || | |||||||||||||||||||| | | | ||||||||||||||||||||||| Sbjct: 536 cg---taagctcccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaag 591 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaac 582 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 592 aatgagccggcgactcataggcagtggcttggttaagggaac 633
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 852 bits (430), Expect = 0.0 Identities = 550/583 (94%), Gaps = 9/583 (1%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| || |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 136249 aagggcgtagtaatcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 136192 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 136191 attcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 136133 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136132 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 136073 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136072 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 136013 Query: 241 caagcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctagatggctaaagtcca 299 ||||||| ||||||||||||||||| | || ||| |||||||||||||| |||||||| Sbjct: 136012 caagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtcca 135953 Query: 300 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135952 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 135893 Query: 360 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135892 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 135833 Query: 420 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 479 ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 135832 gtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 135773 Query: 480 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 539 ||| | |||||||||||||||||||| | || | |||||||||||||||||||||| Sbjct: 135772 ccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaa 135718 Query: 540 gaatgagccggcgactcataggcagtggcttggttaagggaac 582 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135717 gaatgagccggcgactcataggcagtggcttggttaagggaac 135675 Score = 852 bits (430), Expect = 0.0 Identities = 550/583 (94%), Gaps = 9/583 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| || |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 106381 aagggcgtagtaatcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 106438 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 106439 attcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 106497 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106498 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 106557 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106558 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 106617 Query: 241 caagcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctagatggctaaagtcca 299 ||||||| ||||||||||||||||| | || ||| |||||||||||||| |||||||| Sbjct: 106618 caagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtcca 106677 Query: 300 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106678 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 106737 Query: 360 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106738 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 106797 Query: 420 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 479 ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 106798 gtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 106857 Query: 480 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 539 ||| | |||||||||||||||||||| | || | |||||||||||||||||||||| Sbjct: 106858 ccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaa 106912 Query: 540 gaatgagccggcgactcataggcagtggcttggttaagggaac 582 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106913 gaatgagccggcgactcataggcagtggcttggttaagggaac 106955
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 852 bits (430), Expect = 0.0 Identities = 550/583 (94%), Gaps = 9/583 (1%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| || |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 136887 aagggcgtagtaatcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 136830 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 136829 attcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 136771 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136770 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 136711 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136710 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 136651 Query: 241 caagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtcca 299 ||||||| ||||||||||||||||| | ||| ||| |||||||||||||| |||||||| Sbjct: 136650 caagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtcca 136591 Query: 300 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 359 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 136590 gtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcc 136531 Query: 360 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136530 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 136471 Query: 420 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 479 ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 136470 gtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 136411 Query: 480 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 539 ||| | |||||||||||||||||||| | || | |||||||||||||||||||||| Sbjct: 136410 ccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaa 136356 Query: 540 gaatgagccggcgactcataggcagtggcttggttaagggaac 582 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136355 gaatgagccggcgactcataggcagtggcttggttaagggaac 136313 Score = 852 bits (430), Expect = 0.0 Identities = 550/583 (94%), Gaps = 9/583 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| || |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 106670 aagggcgtagtaatcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 106727 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 106728 attcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 106786 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106787 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 106846 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106847 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 106906 Query: 241 caagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtcca 299 ||||||| ||||||||||||||||| | ||| ||| |||||||||||||| |||||||| Sbjct: 106907 caagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtcca 106966 Query: 300 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 359 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 106967 gtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcc 107026 Query: 360 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107027 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 107086 Query: 420 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 479 ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 107087 gtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 107146 Query: 480 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 539 ||| | |||||||||||||||||||| | || | |||||||||||||||||||||| Sbjct: 107147 ccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaa 107201 Query: 540 gaatgagccggcgactcataggcagtggcttggttaagggaac 582 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107202 gaatgagccggcgactcataggcagtggcttggttaagggaac 107244
>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA intergenic spacer region and 23S ribosomal RNA gene, partial sequences Length = 3735 Score = 852 bits (430), Expect = 0.0 Identities = 550/583 (94%), Gaps = 9/583 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| || |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1575 aagggcgtagtaatcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 1632 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 1633 attcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 1691 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1692 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 1751 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1752 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 1811 Query: 241 caagcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctagatggctaaagtcca 299 ||||||| ||||||||||||||||| | || ||| |||||||||||||| |||||||| Sbjct: 1812 caagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtcca 1871 Query: 300 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1872 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 1931 Query: 360 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1932 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 1991 Query: 420 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 479 ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 1992 gtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 2051 Query: 480 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 539 ||| | |||||||||||||||||||| | || | |||||||||||||||||||||| Sbjct: 2052 ccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaa 2106 Query: 540 gaatgagccggcgactcataggcagtggcttggttaagggaac 582 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2107 gaatgagccggcgactcataggcagtggcttggttaagggaac 2149
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 852 bits (430), Expect = 0.0 Identities = 550/583 (94%), Gaps = 9/583 (1%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| || |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 135495 aagggcgtagtaatcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 135438 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 135437 attcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 135379 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135378 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 135319 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135318 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 135259 Query: 241 caagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtcca 299 ||||||| ||||||||||||||||| | ||| ||| |||||||||||||| |||||||| Sbjct: 135258 caagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtcca 135199 Query: 300 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 359 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 135198 gtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcc 135139 Query: 360 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135138 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 135079 Query: 420 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 479 ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 135078 gtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 135019 Query: 480 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 539 ||| | |||||||||||||||||||| | || | |||||||||||||||||||||| Sbjct: 135018 ccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaa 134964 Query: 540 gaatgagccggcgactcataggcagtggcttggttaagggaac 582 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 134963 gaatgagccggcgactcataggcagtggcttggttaagggaac 134921 Score = 852 bits (430), Expect = 0.0 Identities = 550/583 (94%), Gaps = 9/583 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| || |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 105541 aagggcgtagtaatcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 105598 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 105599 attcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 105657 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105658 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 105717 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105718 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 105777 Query: 241 caagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtcca 299 ||||||| ||||||||||||||||| | ||| ||| |||||||||||||| |||||||| Sbjct: 105778 caagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtcca 105837 Query: 300 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 359 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 105838 gtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcc 105897 Query: 360 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105898 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 105957 Query: 420 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 479 ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 105958 gtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 106017 Query: 480 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 539 ||| | |||||||||||||||||||| | || | |||||||||||||||||||||| Sbjct: 106018 ccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaa 106072 Query: 540 gaatgagccggcgactcataggcagtggcttggttaagggaac 582 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106073 gaatgagccggcgactcataggcagtggcttggttaagggaac 106115
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 852 bits (430), Expect = 0.0 Identities = 550/583 (94%), Gaps = 9/583 (1%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| || |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 135630 aagggcgtagtaatcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 135573 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 135572 attcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 135514 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135513 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 135454 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135453 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 135394 Query: 241 caagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtcca 299 ||||||| ||||||||||||||||| | ||| ||| |||||||||||||| |||||||| Sbjct: 135393 caagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtcca 135334 Query: 300 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 359 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 135333 gtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcc 135274 Query: 360 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135273 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 135214 Query: 420 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 479 ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 135213 gtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 135154 Query: 480 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 539 ||| | |||||||||||||||||||| | || | |||||||||||||||||||||| Sbjct: 135153 ccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaa 135099 Query: 540 gaatgagccggcgactcataggcagtggcttggttaagggaac 582 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135098 gaatgagccggcgactcataggcagtggcttggttaagggaac 135056 Score = 852 bits (430), Expect = 0.0 Identities = 550/583 (94%), Gaps = 9/583 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| || |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 105713 aagggcgtagtaatcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 105770 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 105771 attcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 105829 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105830 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 105889 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105890 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 105949 Query: 241 caagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtcca 299 ||||||| ||||||||||||||||| | ||| ||| |||||||||||||| |||||||| Sbjct: 105950 caagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtcca 106009 Query: 300 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 359 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 106010 gtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcc 106069 Query: 360 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106070 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 106129 Query: 420 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 479 ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 106130 gtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 106189 Query: 480 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 539 ||| | |||||||||||||||||||| | || | |||||||||||||||||||||| Sbjct: 106190 ccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaa 106244 Query: 540 gaatgagccggcgactcataggcagtggcttggttaagggaac 582 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106245 gaatgagccggcgactcataggcagtggcttggttaagggaac 106287
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 852 bits (430), Expect = 0.0 Identities = 550/583 (94%), Gaps = 9/583 (1%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| || |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 135628 aagggcgtagtaatcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 135571 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 135570 attcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 135512 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135511 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 135452 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135451 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 135392 Query: 241 caagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtcca 299 ||||||| ||||||||||||||||| | ||| ||| |||||||||||||| |||||||| Sbjct: 135391 caagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtcca 135332 Query: 300 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 359 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 135331 gtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcc 135272 Query: 360 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135271 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 135212 Query: 420 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 479 ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 135211 gtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 135152 Query: 480 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 539 ||| | |||||||||||||||||||| | || | |||||||||||||||||||||| Sbjct: 135151 ccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaa 135097 Query: 540 gaatgagccggcgactcataggcagtggcttggttaagggaac 582 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135096 gaatgagccggcgactcataggcagtggcttggttaagggaac 135054 Score = 852 bits (430), Expect = 0.0 Identities = 550/583 (94%), Gaps = 9/583 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| || |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 105710 aagggcgtagtaatcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 105767 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 105768 attcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 105826 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105827 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 105886 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105887 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 105946 Query: 241 caagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtcca 299 ||||||| ||||||||||||||||| | ||| ||| |||||||||||||| |||||||| Sbjct: 105947 caagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtcca 106006 Query: 300 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 359 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 106007 gtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcc 106066 Query: 360 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106067 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 106126 Query: 420 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 479 ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 106127 gtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 106186 Query: 480 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 539 ||| | |||||||||||||||||||| | || | |||||||||||||||||||||| Sbjct: 106187 ccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaa 106241 Query: 540 gaatgagccggcgactcataggcagtggcttggttaagggaac 582 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106242 gaatgagccggcgactcataggcagtggcttggttaagggaac 106284
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 852 bits (430), Expect = 0.0 Identities = 550/583 (94%), Gaps = 9/583 (1%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| || |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 135540 aagggcgtagtaatcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 135483 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 135482 attcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 135424 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135423 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 135364 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135363 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 135304 Query: 241 caagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtcca 299 ||||||| ||||||||||||||||| | ||| ||| |||||||||||||| |||||||| Sbjct: 135303 caagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtcca 135244 Query: 300 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 359 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 135243 gtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcc 135184 Query: 360 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135183 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 135124 Query: 420 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 479 ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 135123 gtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 135064 Query: 480 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 539 ||| | |||||||||||||||||||| | || | |||||||||||||||||||||| Sbjct: 135063 ccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaa 135009 Query: 540 gaatgagccggcgactcataggcagtggcttggttaagggaac 582 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135008 gaatgagccggcgactcataggcagtggcttggttaagggaac 134966 Score = 852 bits (430), Expect = 0.0 Identities = 550/583 (94%), Gaps = 9/583 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| || |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 105588 aagggcgtagtaatcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 105645 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 105646 attcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 105704 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105705 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 105764 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105765 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 105824 Query: 241 caagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtcca 299 ||||||| ||||||||||||||||| | ||| ||| |||||||||||||| |||||||| Sbjct: 105825 caagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtcca 105884 Query: 300 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 359 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 105885 gtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcc 105944 Query: 360 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105945 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 106004 Query: 420 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 479 ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 106005 gtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 106064 Query: 480 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 539 ||| | |||||||||||||||||||| | || | |||||||||||||||||||||| Sbjct: 106065 ccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaa 106119 Query: 540 gaatgagccggcgactcataggcagtggcttggttaagggaac 582 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106120 gaatgagccggcgactcataggcagtggcttggttaagggaac 106162
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 852 bits (430), Expect = 0.0 Identities = 550/583 (94%), Gaps = 9/583 (1%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| || |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 136247 aagggcgtagtaatcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 136190 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 136189 attcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 136131 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136130 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 136071 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136070 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 136011 Query: 241 caagcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctagatggctaaagtcca 299 ||||||| ||||||||||||||||| | || ||| |||||||||||||| |||||||| Sbjct: 136010 caagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtcca 135951 Query: 300 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135950 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 135891 Query: 360 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135890 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 135831 Query: 420 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 479 ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 135830 gtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 135771 Query: 480 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 539 ||| | |||||||||||||||||||| | || | |||||||||||||||||||||| Sbjct: 135770 ccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaa 135716 Query: 540 gaatgagccggcgactcataggcagtggcttggttaagggaac 582 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135715 gaatgagccggcgactcataggcagtggcttggttaagggaac 135673 Score = 852 bits (430), Expect = 0.0 Identities = 550/583 (94%), Gaps = 9/583 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| || |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 106379 aagggcgtagtaatcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 106436 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 106437 attcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 106495 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106496 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 106555 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106556 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 106615 Query: 241 caagcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctagatggctaaagtcca 299 ||||||| ||||||||||||||||| | || ||| |||||||||||||| |||||||| Sbjct: 106616 caagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtcca 106675 Query: 300 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106676 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 106735 Query: 360 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106736 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 106795 Query: 420 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 479 ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 106796 gtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 106855 Query: 480 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 539 ||| | |||||||||||||||||||| | || | |||||||||||||||||||||| Sbjct: 106856 ccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaa 106910 Query: 540 gaatgagccggcgactcataggcagtggcttggttaagggaac 582 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106911 gaatgagccggcgactcataggcagtggcttggttaagggaac 106953
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 848 bits (428), Expect = 0.0 Identities = 548/582 (94%), Gaps = 7/582 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| ||||||||||||||||||||| ||||| |||||||| ||||||||||| Sbjct: 106056 aagggcgtagtaagcgacgaaatgcttcgggg-agttgcaaataagcgtagatccggag- 106113 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||| Sbjct: 106114 attcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaa 106172 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106173 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 106232 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106233 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 106292 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 ||||||| ||||||||||||||||| || ||||| |||||||||||||| | ||||||| Sbjct: 106293 caagcgtcgtgctgctaggcgaagcagtggagtgttgcaccctagatggcgagagtccag 106352 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 106353 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 106412 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 106413 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaag 106472 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 106473 tagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 106532 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 || | |||| ||||||||||||||| | | | | ||||||||||||||||||||||| Sbjct: 106533 cg---taagcttccaagcagtgggaggag-acgaggactctgaccgcgtgcctgttgaag 106588 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaac 582 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 106589 aatgagccggcgactcataggcagtggcttggttaagggaac 106630 Score = 799 bits (403), Expect = 0.0 Identities = 547/585 (93%), Gaps = 10/585 (1%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| ||||||||||||||||||||| ||||| |||||||| ||||||||||| Sbjct: 135853 aagggcgtagtaagcgacgaaatgcttcgggg-agttgcaaataagcgtagatccggag- 135796 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||| Sbjct: 135795 attcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaa 135737 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135736 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 135677 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc-aat 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 135676 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaaat 135617 Query: 240 acaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcca 299 |||||||| ||||||||||||||||| || ||||| |||||||||||||| | |||||| Sbjct: 135616 acaagcgtcgtgctgctaggcgaagcagtggagtgttgcaccctagatggcgagagtcca 135557 Query: 300 gtagccgaaagcatcactagcttatg-ctctgacccgagtagcatggggcacgtggaatc 358 |||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||| Sbjct: 135556 gtagccgaaagcatcactagcttacgcccctgacccgagtagcatggggcacgtggaatc 135497 Query: 359 ccgtgtgaatcag-caaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 417 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 135496 ccgtgtgaatcagccaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtg 135437 Query: 418 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 477 ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 135436 aagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatga 135377 Query: 478 aaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttg 537 ||||| | |||| ||||||||||||||| | | | | |||||||||||||||||||| Sbjct: 135376 aaccg---taagcttccaagcagtgggaggag-acgaggactctgaccgcgtgcctgttg 135321 Query: 538 aagaatgagccggcgactcataggcagtggcttggttaagggaac 582 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135320 aagaatgagccggcgactcataggcagtggcttggttaagggaac 135276
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 848 bits (428), Expect = 0.0 Identities = 548/582 (94%), Gaps = 7/582 (1%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| ||||||||||||||||||||| ||||| |||||||| ||||||||||| Sbjct: 136129 aagggcgtagtaagcgacgaaatgcttcgggg-agttgcaaataagcgtagatccggag- 136072 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||| Sbjct: 136071 attcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaa 136013 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 136012 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 135953 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135952 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 135893 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 ||||||| ||||||||||||||||| || ||||| |||||||||||||| | ||||||| Sbjct: 135892 caagcgtcgtgctgctaggcgaagcagtggagtgttgcaccctagatggcgagagtccag 135833 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 135832 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 135773 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 135772 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaag 135713 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 135712 tagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 135653 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 || | |||| ||||||||||||||| | | | | ||||||||||||||||||||||| Sbjct: 135652 cg---taagcttccaagcagtgggaggag-acgaggactctgaccgcgtgcctgttgaag 135597 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaac 582 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 135596 aatgagccggcgactcataggcagtggcttggttaagggaac 135555 Score = 848 bits (428), Expect = 0.0 Identities = 548/582 (94%), Gaps = 7/582 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| ||||||||||||||||||||| ||||| |||||||| ||||||||||| Sbjct: 106278 aagggcgtagtaagcgacgaaatgcttcgggg-agttgcaaataagcgtagatccggag- 106335 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||| Sbjct: 106336 attcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaa 106394 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106395 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 106454 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106455 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 106514 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 ||||||| ||||||||||||||||| || ||||| |||||||||||||| | ||||||| Sbjct: 106515 caagcgtcgtgctgctaggcgaagcagtggagtgttgcaccctagatggcgagagtccag 106574 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 106575 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 106634 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 106635 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaag 106694 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 106695 tagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 106754 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 || | |||| ||||||||||||||| | | | | ||||||||||||||||||||||| Sbjct: 106755 cg---taagcttccaagcagtgggaggag-acgaggactctgaccgcgtgcctgttgaag 106810 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaac 582 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 106811 aatgagccggcgactcataggcagtggcttggttaagggaac 106852
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 846 bits (427), Expect = 0.0 Identities = 549/583 (94%), Gaps = 9/583 (1%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| || |||||||||||||||||| |||||||||||||||||||||||| | Sbjct: 135978 aagggcgtagtaatcgacgaaatgcttcgggg-agttgaaaataagcatagatccgg-gg 135921 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 135920 attcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 135862 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135861 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 135802 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135801 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 135742 Query: 241 caagcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctagatggctaaagtcca 299 ||||||| ||||||||||||||||| | || ||| |||||||||||||| |||||||| Sbjct: 135741 caagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtcca 135682 Query: 300 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135681 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 135622 Query: 360 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135621 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 135562 Query: 420 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 479 ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 135561 gtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 135502 Query: 480 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 539 ||| | |||||||||||||||||||| | || | |||||||||||||||||||||| Sbjct: 135501 ccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaa 135447 Query: 540 gaatgagccggcgactcataggcagtggcttggttaagggaac 582 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135446 gaatgagccggcgactcataggcagtggcttggttaagggaac 135404 Score = 846 bits (427), Expect = 0.0 Identities = 549/583 (94%), Gaps = 9/583 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| || |||||||||||||||||| |||||||||||||||||||||||| | Sbjct: 106160 aagggcgtagtaatcgacgaaatgcttcgggg-agttgaaaataagcatagatccgg-gg 106217 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 106218 attcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 106276 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106277 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 106336 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106337 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 106396 Query: 241 caagcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctagatggctaaagtcca 299 ||||||| ||||||||||||||||| | || ||| |||||||||||||| |||||||| Sbjct: 106397 caagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtcca 106456 Query: 300 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106457 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 106516 Query: 360 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106517 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 106576 Query: 420 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 479 ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 106577 gtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 106636 Query: 480 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 539 ||| | |||||||||||||||||||| | || | |||||||||||||||||||||| Sbjct: 106637 ccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaa 106691 Query: 540 gaatgagccggcgactcataggcagtggcttggttaagggaac 582 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 106692 gaatgagccggcgactcataggcagtggcttggttaagggaac 106734
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 844 bits (426), Expect = 0.0 Identities = 549/583 (94%), Gaps = 9/583 (1%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| || |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 135507 aagggcgtagtaatcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 135450 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 135449 attcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 135391 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135390 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 135331 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135330 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 135271 Query: 241 caagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtcca 299 ||||||| ||||||||||||||||| | ||| ||| |||||||||||||| |||||||| Sbjct: 135270 caagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtcca 135211 Query: 300 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 359 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 135210 gtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcc 135151 Query: 360 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 135150 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 135091 Query: 420 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 479 ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 135090 gtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 135031 Query: 480 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 539 ||| | |||||||||||||||||||| | || | |||||||||||||||||||||| Sbjct: 135030 ccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaa 134976 Query: 540 gaatgagccggcgactcataggcagtggcttggttaagggaac 582 |||||||||||||||| |||||||||||||||||||||||||| Sbjct: 134975 gaatgagccggcgactaataggcagtggcttggttaagggaac 134933 Score = 844 bits (426), Expect = 0.0 Identities = 549/583 (94%), Gaps = 9/583 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| || |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 105555 aagggcgtagtaatcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 105612 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 105613 attcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 105671 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105672 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 105731 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105732 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 105791 Query: 241 caagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtcca 299 ||||||| ||||||||||||||||| | ||| ||| |||||||||||||| |||||||| Sbjct: 105792 caagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccctagatggcgaaagtcca 105851 Query: 300 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 359 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 105852 gtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcc 105911 Query: 360 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 105912 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 105971 Query: 420 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 479 ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 105972 gtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 106031 Query: 480 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 539 ||| | |||||||||||||||||||| | || | |||||||||||||||||||||| Sbjct: 106032 ccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaa 106086 Query: 540 gaatgagccggcgactcataggcagtggcttggttaagggaac 582 |||||||||||||||| |||||||||||||||||||||||||| Sbjct: 106087 gaatgagccggcgactaataggcagtggcttggttaagggaac 106129
>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene Length = 2811 Score = 842 bits (425), Expect = 0.0 Identities = 549/583 (94%), Gaps = 8/583 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 51 aagggcgtagtaagcgacgaaatgcttcgggg-agttgaaaataagcgtagatccggag- 108 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||| Sbjct: 109 attcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaa 167 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 168 cctaacgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 227 Query: 181 tagc-ggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaat 239 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 228 tagcaggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaat 287 Query: 240 acaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcca 299 |||||||| |||||||||||||||||||| ||||||| |||||||||||||| |||||| Sbjct: 288 acaagcgtcgtgctgctaggcgaagcggtgaagtgccgaaccctagatggctagagtcca 347 Query: 300 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 359 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 348 gtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcc 407 Query: 360 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 408 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaa 467 Query: 420 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 479 ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 468 gtagtaccgtgagggaagggtgaaaagaacccccaccggggagtgaaatagaacatgaaa 527 Query: 480 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 539 ||| | |||||||||||||||||||| | | | |||||||||||||||||||||| Sbjct: 528 ccg---taagctcccaagcagtgggaggagcctg-gggctctgaccgcgtgcctgttgaa 583 Query: 540 gaatgagccggcgactcataggcagtggcttggttaagggaac 582 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 584 gaatgagccggcgactcataggcagtggcttggttaagggaac 626
>dbj|AK059024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-B07, full insert sequence Length = 1462 Score = 841 bits (424), Expect = 0.0 Identities = 427/428 (99%) Strand = Plus / Plus Query: 158 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 217 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 gaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaa 60 Query: 218 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 277 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 aacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccg 120 Query: 278 caccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgag 337 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 121 caccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgag 180 Query: 338 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 397 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 240 Query: 398 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 457 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 300 Query: 458 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 360 Query: 518 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 577 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 420 Query: 578 ggaacgga 585 |||||||| Sbjct: 421 ggaacgga 428
>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full insert sequence Length = 2390 Score = 837 bits (422), Expect = 0.0 Identities = 425/426 (99%) Strand = Plus / Plus Query: 160 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 219 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 220 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 279 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 280 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 339 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180 Query: 340 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 399 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240 Query: 400 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 459 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 300 Query: 460 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 519 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 360 Query: 520 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 579 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 420 Query: 580 aacgga 585 |||||| Sbjct: 421 aacgga 426
>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full insert sequence Length = 1896 Score = 837 bits (422), Expect = 0.0 Identities = 425/426 (99%) Strand = Plus / Plus Query: 160 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 219 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaa 60 Query: 220 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 279 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 cggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgca 120 Query: 280 ccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagta 339 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 121 ccctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagta 180 Query: 340 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 399 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 gcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatact 240 Query: 400 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 459 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 cctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtggg 300 Query: 460 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 519 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatct 360 Query: 520 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 579 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 420 Query: 580 aacgga 585 |||||| Sbjct: 421 aacgga 426
>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full insert sequence Length = 1463 Score = 835 bits (421), Expect = 0.0 Identities = 424/425 (99%) Strand = Plus / Plus Query: 161 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 220 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 60 Query: 221 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 280 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 120 Query: 281 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 340 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 121 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 180 Query: 341 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 400 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 240 Query: 401 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 460 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 300 Query: 461 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 520 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 360 Query: 521 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 580 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 420 Query: 581 acgga 585 ||||| Sbjct: 421 acgga 425
>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full insert sequence Length = 1109 Score = 835 bits (421), Expect = 0.0 Identities = 424/425 (99%) Strand = Plus / Plus Query: 161 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 220 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4 agcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaac 63 Query: 221 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 280 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 64 ggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcac 123 Query: 281 cctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtag 340 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 124 cctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtag 183 Query: 341 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 400 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 catggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactc 243 Query: 401 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 460 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 244 ctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggt 303 Query: 461 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 520 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 304 agtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctc 363 Query: 521 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 580 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 364 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 423 Query: 581 acgga 585 ||||| Sbjct: 424 acgga 428
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 833 bits (420), Expect = 0.0 Identities = 546/582 (93%), Gaps = 7/582 (1%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 ||||||||| || |||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 131740 aagggcgtattaatcgacgaaatgcttcgggg-agttgaaaataagcagagatccggag- 131683 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||||||||||| |||| | ||||||||||||| ||||||||||||||| Sbjct: 131682 attcccgaataggtcaacctttcgaacttc-tgctgaatccatgggcaggcaagagacaa 131624 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131623 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 131564 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131563 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 131504 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 ||||||| ||||||||||||||| | || |||||| | ||||||||||| ||||||||| Sbjct: 131503 caagcgtcgtgctgctaggcgaatcagtggagtgcggaaccctagatggtgaaagtccag 131444 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131443 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 131384 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131383 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 131324 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 131323 tagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 131264 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 || | ||||| |||||||||||||||| | || | ||||||||||||||||||||| Sbjct: 131263 cg---taagctctcaagcagtgggagggggaccaga-ccctgaccgcgtgcctgttgaag 131208 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaac 582 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 131207 aatgagccggcgactcataggcagtggcttggttaagggaac 131166 Score = 833 bits (420), Expect = 0.0 Identities = 546/582 (93%), Gaps = 7/582 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 ||||||||| || |||||||||||||||||| ||||||||||||||| |||||||||| Sbjct: 101705 aagggcgtattaatcgacgaaatgcttcgggg-agttgaaaataagcagagatccggag- 101762 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||||||||||| |||| | ||||||||||||| ||||||||||||||| Sbjct: 101763 attcccgaataggtcaacctttcgaacttc-tgctgaatccatgggcaggcaagagacaa 101821 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101822 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 101881 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 101882 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 101941 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 ||||||| ||||||||||||||| | || |||||| | ||||||||||| ||||||||| Sbjct: 101942 caagcgtcgtgctgctaggcgaatcagtggagtgcggaaccctagatggtgaaagtccag 102001 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102002 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 102061 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102062 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 102121 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 102122 tagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 102181 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 || | ||||| |||||||||||||||| | || | ||||||||||||||||||||| Sbjct: 102182 cg---taagctctcaagcagtgggagggggaccaga-ccctgaccgcgtgcctgttgaag 102237 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaac 582 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 102238 aatgagccggcgactcataggcagtggcttggttaagggaac 102279
>dbj|AK119504.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E12, full insert sequence Length = 1517 Score = 831 bits (419), Expect = 0.0 Identities = 422/423 (99%) Strand = Plus / Plus Query: 163 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 222 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 caaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacgg 60 Query: 223 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 282 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 ggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccc 120 Query: 283 tagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagca 342 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 121 tagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagca 180 Query: 343 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 402 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcct 240 Query: 403 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 462 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtag 300 Query: 463 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctg 522 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctg 360 Query: 523 accgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac 582 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 accgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac 420 Query: 583 gga 585 ||| Sbjct: 421 gga 423
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 829 bits (418), Expect = 0.0 Identities = 547/583 (93%), Gaps = 9/583 (1%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 139453 aagggcgtagtaagcgacgaaatgcttcgggg-agttgaaaataagcgtagatccggag- 139396 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||||||||||| |||||| ||||||||||||| |||| |||||||||| Sbjct: 139395 attcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcagacaagagacaa 139337 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 139336 cctggcgaactgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccgtag 139277 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139276 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 139217 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||| |||||||||||||||||||| ||||||| |||||||||||| | ||||||| Sbjct: 139216 aaagcgtcgtgctgctaggcgaagcggtgaagtgccgaaccctagatggcgatagtccag 139157 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 139156 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 139097 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139096 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 139037 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||| |||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 139036 tagtaccgtgagggaagggtgaaaagaacccccgtcggggagtgaaatagaacatgaaac 138977 Query: 481 cgtgctgagctcccaagcagtgggagg-ggaaagtgatctctgaccgcgtgcctgttgaa 539 || | |||||||||||||||||||| | || | |||||||||||||||||||||| Sbjct: 138976 cg---taagctcccaagcagtgggaggagcccaggg--ctctgaccgcgtgcctgttgaa 138922 Query: 540 gaatgagccggcgactcataggcagtggcttggttaagggaac 582 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 138921 gaatgagccggcgactcataggcagtggcttggttaagggaac 138879 Score = 829 bits (418), Expect = 0.0 Identities = 547/583 (93%), Gaps = 9/583 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 109644 aagggcgtagtaagcgacgaaatgcttcgggg-agttgaaaataagcgtagatccggag- 109701 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||||||||||| |||||| ||||||||||||| |||| |||||||||| Sbjct: 109702 attcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcagacaagagacaa 109760 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 109761 cctggcgaactgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccgtag 109820 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109821 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 109880 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||| |||||||||||||||||||| ||||||| |||||||||||| | ||||||| Sbjct: 109881 aaagcgtcgtgctgctaggcgaagcggtgaagtgccgaaccctagatggcgatagtccag 109940 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 109941 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 110000 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110001 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 110060 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||| |||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 110061 tagtaccgtgagggaagggtgaaaagaacccccgtcggggagtgaaatagaacatgaaac 110120 Query: 481 cgtgctgagctcccaagcagtgggagg-ggaaagtgatctctgaccgcgtgcctgttgaa 539 || | |||||||||||||||||||| | || | |||||||||||||||||||||| Sbjct: 110121 cg---taagctcccaagcagtgggaggagcccaggg--ctctgaccgcgtgcctgttgaa 110175 Query: 540 gaatgagccggcgactcataggcagtggcttggttaagggaac 582 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110176 gaatgagccggcgactcataggcagtggcttggttaagggaac 110218
>gb|BT014358.1| Lycopersicon esculentum clone 133635F, mRNA sequence Length = 838 Score = 829 bits (418), Expect = 0.0 Identities = 548/583 (93%), Gaps = 10/583 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| || |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 26 aagggcgtagtaatcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 83 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 84 attcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 142 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 143 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 202 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 203 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 262 Query: 241 caagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtcca 299 ||||||| ||||||||||||||||| | ||| ||| |||||| | ||||| |||||||| Sbjct: 263 caagcgtcgtgctgctaggcgaagcagcctgaatgctgcaccc-atatggcgaaagtcca 321 Query: 300 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 359 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 322 gtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcc 381 Query: 360 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 441 Query: 420 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 479 ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 442 gtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 501 Query: 480 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 539 ||| | |||||||||||||||||||| | || | |||||||||||||||||||||| Sbjct: 502 ccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaa 556 Query: 540 gaatgagccggcgactcataggcagtggcttggttaagggaac 582 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 557 gaatgagccggcgactcataggcagtggcttggttaagggaac 599
>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3033 Score = 827 bits (417), Expect = 0.0 Identities = 542/579 (93%), Gaps = 6/579 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 52 aagggcgtagcaagcgacgaaatgcttcgggg-agctgaaaataagcatagatccggag- 109 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||| ||| |||||||| |||||| |||||||| ||| ||||||||||||||| Sbjct: 110 attcccgaatgggttaaccttttgaactgc-tgctgaattcataggcaggcaagagacaa 168 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 169 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 228 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 229 tagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagcaata 288 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 ||| |||||| ||||||||||||||||||||| |||||||| |||||| | ||||||| Sbjct: 289 taagtgttgtgttgctaggcgaagcggttgagtcccgcaccccagatggtgagagtccag 348 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 349 tagccgaaagcatcactagcttacgctctaacccgagtagcatggggcacgtggaatccc 408 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 409 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 468 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 469 tagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 528 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 || | |||||||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 529 cg---taagctcccaagcagtgggaggagaatcggatctctgaccgcgtgcctgttgaag 585 Query: 541 aatgagccggcgactcataggcagtggcttggttaaggg 579 ||||||||||||||| ||||| |||||| |||||||||| Sbjct: 586 aatgagccggcgacttataggtagtggcctggttaaggg 624
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 825 bits (416), Expect = 0.0 Identities = 548/585 (93%), Gaps = 9/585 (1%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 139662 aagggcgtagtaagcgacgaaatgcttcgggg-agttgaaaataagcgtagatccggag- 139605 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 139604 attcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 139546 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139545 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 139486 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139485 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 139426 Query: 241 caagcgttgtgctgctaggcgaagcggt-tgagtgccgcaccctagatggctaaagtcca 299 ||||||| ||||||||||||||||| || || ||| ||||||||||||| | |||||| Sbjct: 139425 caagcgtcgtgctgctaggcgaagcagtgcgaatgctgcaccctagatggtgagagtcca 139366 Query: 300 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 359 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 139365 gtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcc 139306 Query: 360 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 419 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 139305 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgacccatagcgaa 139246 Query: 420 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 479 ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 139245 gtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 139186 Query: 480 ccgtgctgagctcccaagcagtgggagggga--aagtgatctctgaccgcgtgcctgttg 537 ||| | |||||||||||||||||||| || | | |||||||||||||||||||| Sbjct: 139185 ccg---taagctcccaagcagtgggaggagactactaggactctgaccgcgtgcctgttg 139129 Query: 538 aagaatgagccggcgactcataggcagtggcttggttaagggaac 582 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 139128 aagaatgagccggcgactcataggcagtggcttggttaagggaac 139084 Score = 825 bits (416), Expect = 0.0 Identities = 548/585 (93%), Gaps = 9/585 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 109637 aagggcgtagtaagcgacgaaatgcttcgggg-agttgaaaataagcgtagatccggag- 109694 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 109695 attcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 109753 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109754 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 109813 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 109814 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 109873 Query: 241 caagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctagatggctaaagtcca 299 ||||||| ||||||||||||||||| || || ||| ||||||||||||| | |||||| Sbjct: 109874 caagcgtcgtgctgctaggcgaagcagtgcgaatgctgcaccctagatggtgagagtcca 109933 Query: 300 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 359 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 109934 gtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcc 109993 Query: 360 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 419 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 109994 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgacccatagcgaa 110053 Query: 420 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 479 ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 110054 gtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 110113 Query: 480 ccgtgctgagctcccaagcagtgggagggga--aagtgatctctgaccgcgtgcctgttg 537 ||| | |||||||||||||||||||| || | | |||||||||||||||||||| Sbjct: 110114 ccg---taagctcccaagcagtgggaggagactactaggactctgaccgcgtgcctgttg 110170 Query: 538 aagaatgagccggcgactcataggcagtggcttggttaagggaac 582 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110171 aagaatgagccggcgactcataggcagtggcttggttaagggaac 110215
>dbj|AK060245.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-G06, full insert sequence Length = 1707 Score = 815 bits (411), Expect = 0.0 Identities = 424/427 (99%), Gaps = 1/427 (0%) Strand = Plus / Plus Query: 39 aaaataagcatagatccggagnattcccaaataggtcaaccttttaaactgcctgctgaa 98 ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 1 aaaataagcatagatccggag-attcccaaataggtcaaccttttgaactgcctgctgaa 59 Query: 99 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 158 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 119 Query: 159 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 218 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 179 Query: 219 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 278 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 180 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 239 Query: 279 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 338 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 240 accctagatggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagt 299 Query: 339 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 398 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 359 Query: 399 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 458 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 360 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 419 Query: 459 gtagtga 465 ||||||| Sbjct: 420 gtagtga 426
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 811 bits (409), Expect = 0.0 Identities = 542/581 (93%), Gaps = 8/581 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct: 4282 aagggcgtagtaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccg-agg 4339 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||||||||||| |||||| |||||||| || ||||||||||||||||| Sbjct: 4340 attcccgaataggtcaacctttcgaactgc-tgctgaattcacgagcaggcaagagacaa 4398 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4399 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 4458 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 4459 tagcggcgagcgaaatgggaacagcctaaaccgtgaaaacggggttgtgggagagcaata 4518 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 ||||||| ||| ||||||||||||| | || || ||||||||||||| ||||||||| Sbjct: 4519 caagcgtcgtgttgctaggcgaagcaatcgaatgttgcaccctagatggtgaaagtccag 4578 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4579 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 4638 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 4639 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaag 4698 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 4699 tagtaccgtgagggaaaggtgaaaagaacccctgtcggggagtgaaatagaacatgaaac 4758 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 || | |||||||||||||||||||| | | | ||||||||||||||||||||||| Sbjct: 4759 cg---taagctcccaagcagtgggaggagctgggg--ctctgaccgcgtgcctgttgaag 4813 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaa 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 4814 aatgagccggcgactcataggcagtggcttggttaagggaa 4854
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 811 bits (409), Expect = 0.0 Identities = 542/581 (93%), Gaps = 8/581 (1%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct: 23643 aagggcgtagtaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccg-agg 23586 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||||||||||| |||||| |||||||| || ||||||||||||||||| Sbjct: 23585 attcccgaataggtcaacctttcgaactgc-tgctgaattcacgagcaggcaagagacaa 23527 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23526 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 23467 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 23466 tagcggcgagcgaaatgggaacagcctaaaccgtgaaaacggggttgtgggagagcaata 23407 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 ||||||| ||| ||||||||||||| | || || ||||||||||||| ||||||||| Sbjct: 23406 caagcgtcgtgttgctaggcgaagcaatcgaatgttgcaccctagatggtgaaagtccag 23347 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23346 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 23287 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 23286 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaag 23227 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 23226 tagtaccgtgagggaaaggtgaaaagaacccctgtcggggagtgaaatagaacatgaaac 23167 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 || | |||||||||||||||||||| | | | ||||||||||||||||||||||| Sbjct: 23166 cg---taagctcccaagcagtgggaggagctgggg--ctctgaccgcgtgcctgttgaag 23112 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaa 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 23111 aatgagccggcgactcataggcagtggcttggttaagggaa 23071
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 811 bits (409), Expect = 0.0 Identities = 543/581 (93%), Gaps = 9/581 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct: 4551 aagggcgtagtaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccg-agg 4608 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||||||||||| |||||| |||||||| || ||||||||||||||||| Sbjct: 4609 attcccgaataggtcaacctttcgaactgc-tgctgaattcacgagcaggcaagagacaa 4667 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4668 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 4727 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4728 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 4787 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 ||||||| ||||||||||||||||| || || || ||||||||||||| ||||||||| Sbjct: 4788 caagcgtcgtgctgctaggcgaagcagtcgaatgttgcaccctagatggtgaaagtccag 4847 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 4848 tagccgaaagcatcactagcttatgctctgacccgagtaacatggggcacgtgaaatccc 4907 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 4908 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaag 4967 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||| | ||| ||||||||||||| |||||| Sbjct: 4968 tagtaccgtgagggaaaggtgaaaagaacccctggcggggagtgaaatagaacatgaaac 5027 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 || | ||||||||| |||||||||| | | | ||||||||||||||||||||||| Sbjct: 5028 cg---taagctcccaa-cagtgggaggagctgggg--ctctgaccgcgtgcctgttgaag 5081 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaa 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 5082 aatgagccggcgactcataggcagtggcttggttaagggaa 5122
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 811 bits (409), Expect = 0.0 Identities = 543/581 (93%), Gaps = 9/581 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct: 4551 aagggcgtagtaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccg-agg 4608 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||||||||||| |||||| |||||||| || ||||||||||||||||| Sbjct: 4609 attcccgaataggtcaacctttcgaactgc-tgctgaattcacgagcaggcaagagacaa 4667 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4668 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 4727 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4728 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 4787 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 ||||||| ||||||||||||||||| || || || ||||||||||||| ||||||||| Sbjct: 4788 caagcgtcgtgctgctaggcgaagcagtcgaatgttgcaccctagatggtgaaagtccag 4847 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| Sbjct: 4848 tagccgaaagcatcactagcttatgctctgacccgagtaacatggggcacgtgaaatccc 4907 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 4908 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaag 4967 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||| | ||| ||||||||||||| |||||| Sbjct: 4968 tagtaccgtgagggaaaggtgaaaagaacccctggcggggagtgaaatagaacatgaaac 5027 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 || | ||||||||| |||||||||| | | | ||||||||||||||||||||||| Sbjct: 5028 cg---taagctcccaa-cagtgggaggagctgggg--ctctgaccgcgtgcctgttgaag 5081 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaa 581 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 5082 aatgagccggcgactcataggcagtggcttggttaagggaa 5122
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 805 bits (406), Expect = 0.0 Identities = 544/583 (93%), Gaps = 9/583 (1%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 142828 aagggcgtagtaagcgacgaaatgcttcgggg-agttgaaaataagcgcagatccggag- 142771 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||| ||||||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 142770 attcccgaatgggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 142712 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142711 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 142652 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 142651 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagtcata 142592 Query: 241 caagcgttgtgctgctaggcgaagcggttg-agtgccgcaccctagatggctaaagtcca 299 ||||||| ||||||||||||||||| | || ||||| ||||||||||||| | |||||| Sbjct: 142591 caagcgtcgtgctgctaggcgaagcagctggagtgctgcaccctagatggtgagagtcca 142532 Query: 300 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 359 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 142531 gtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcc 142472 Query: 360 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 419 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 142471 cgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcgaa 142412 Query: 420 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 479 ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 142411 gtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 142352 Query: 480 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 539 ||| | ||||||||||||||||||| | || | |||||||||||||||||||||| Sbjct: 142351 ccg---taggctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaa 142297 Query: 540 gaatgagccggcgactcataggcagtggcttggttaagggaac 582 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 142296 gaatgagccggcgactcataggcagtggcttggttaagggaac 142254 Score = 805 bits (406), Expect = 0.0 Identities = 544/583 (93%), Gaps = 9/583 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 110500 aagggcgtagtaagcgacgaaatgcttcgggg-agttgaaaataagcgcagatccggag- 110557 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||| ||||||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 110558 attcccgaatgggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 110616 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110617 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 110676 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 110677 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagtcata 110736 Query: 241 caagcgttgtgctgctaggcgaagcggttg-agtgccgcaccctagatggctaaagtcca 299 ||||||| ||||||||||||||||| | || ||||| ||||||||||||| | |||||| Sbjct: 110737 caagcgtcgtgctgctaggcgaagcagctggagtgctgcaccctagatggtgagagtcca 110796 Query: 300 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 359 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 110797 gtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcc 110856 Query: 360 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 419 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 110857 cgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcgaa 110916 Query: 420 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 479 ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 110917 gtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 110976 Query: 480 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 539 ||| | ||||||||||||||||||| | || | |||||||||||||||||||||| Sbjct: 110977 ccg---taggctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaa 111031 Query: 540 gaatgagccggcgactcataggcagtggcttggttaagggaac 582 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 111032 gaatgagccggcgactcataggcagtggcttggttaagggaac 111074
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 799 bits (403), Expect = 0.0 Identities = 543/584 (92%), Gaps = 8/584 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||| | ||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 86313 aagggcgtggtaagcgacgaaatgcttcgggg-agttgaaaatgagcatagatccggag- 86370 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||| |||| ||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 86371 attcccgaataggttaacccttttaactgc-tgctgaatccatgggcaggcaagagacaa 86429 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 86430 cctggcgaactgaaacatcttagtagccagaggaatagaaagcaaaagcgattcccgtag 86489 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc--aa 238 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 86490 tagtggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcccaa 86549 Query: 239 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 298 || |||| |||||||||||||||||||||||||| | ||||||||||||| | ||||| Sbjct: 86550 tataagctctgtgctgctaggcgaagcggttgagtcctgcaccctagatggtgagagtcc 86609 Query: 299 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 358 ||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||||| Sbjct: 86610 agtagccgaaagcatcattggcttacgctctaacccgagtagcatggggcacgtggaatc 86669 Query: 359 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 86670 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 86729 Query: 419 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 478 |||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 86730 agtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaa 86789 Query: 479 accgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttga 538 |||| | |||||||||||||||||||| || |||||||||||||||||||||||| Sbjct: 86790 accg---taagctcccaagcagtgggaggaaaattagatctctgaccgcgtgcctgttga 86846 Query: 539 agaatgagccggcgactcataggcagtggcttggttaagggaac 582 ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 86847 agaatgagccggcgacttataggcagtggcttggttaagggaac 86890
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 799 bits (403), Expect = 0.0 Identities = 543/584 (92%), Gaps = 8/584 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||| | ||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 88399 aagggcgtggtaagcgacgaaatgcttcgggg-agttgaaaattagcatagatccggag- 88456 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||| |||||||| ||||| ||||||||||||| ||||||||||||||| Sbjct: 88457 attcccgaataggttaacctttttcactgc-tgctgaatccatgggcaggcaagagacaa 88515 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 88516 cctggtgaactgaaacatcttagtagccagaggaatagaaagcaaaagcgattcccgtag 88575 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagca--a 238 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 88576 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcacaa 88635 Query: 239 tacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcc 298 || |||| |||||||||||||||||||||||||| | ||||||||||||| | ||||| Sbjct: 88636 tataagctctgtgctgctaggcgaagcggttgagtcctgcaccctagatggtgagagtcc 88695 Query: 299 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 358 ||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||||| Sbjct: 88696 agtagccgaaagcatcattggcttacgctctaacccgagtagcatggggcacgtggaatc 88755 Query: 359 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88756 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 88815 Query: 419 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 478 |||||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||| Sbjct: 88816 agtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaa 88875 Query: 479 accgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttga 538 |||| | |||||||||||||||||||| || |||||||||||||||||||||||| Sbjct: 88876 accg---taagctcccaagcagtgggaggaaaattagatctctgaccgcgtgcctgttga 88932 Query: 539 agaatgagccggcgactcataggcagtggcttggttaagggaac 582 ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 88933 agaatgagccggcgacttataggcagtggcttggttaagggaac 88976
>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S ribosomal RNA genes, complete sequence; chloroplast genes for chloroplast products Length = 5157 Score = 793 bits (400), Expect = 0.0 Identities = 534/569 (93%), Gaps = 11/569 (1%) Strand = Plus / Plus Query: 17 acgaaatgcttcggggnagttgaaaataagcatagatccggagnattcccaaataggtca 76 |||||||||||||||| |||||||||||||||||||||||||| |||||| |||||| || Sbjct: 1833 acgaaatgcttcgggg-agttgaaaataagcatagatccggag-attcccgaatagggca 1890 Query: 77 accttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaac 136 |||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||| | Sbjct: 1891 acctttcgaactgc-tgctgaatccatgggcaggcaagagacaacctggcgaactgaacc 1949 Query: 137 atcttagtagccagaggaaaagaaagcaaaag-cgattcccgtagtagcggcgagcgaaa 195 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1950 atcttagtagccagaggaaaagaaagcaaaaggcgattcccgtagtagcggcgagcgaaa 2009 Query: 196 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtt-gtgctg 254 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 2010 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcggccgtgctg 2069 Query: 255 ctaggcgaagcggtt-gagtgccgcaccctagatggctaaagtccagtagccgaaagcat 313 ||||||||||| | || ||| |||||||||||||| |||||||||||||||||||||| Sbjct: 2070 ctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtccagtagccgaaagcat 2129 Query: 314 cactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagca 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2130 cactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagca 2189 Query: 374 aggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagg 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2190 aggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagg 2249 Query: 434 gaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcc 493 ||| ||||||||||||||||| ||| ||||||||||||| |||||||| | |||||| Sbjct: 2250 gaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg---taagctcc 2306 Query: 494 caagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcga 553 |||||||||||||| | || | |||||||||||||||||||||||||||||||||||| Sbjct: 2307 caagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcga 2364 Query: 554 ctcataggcagtggcttggttaagggaac 582 ||||||||||||||||||||||||||||| Sbjct: 2365 ctcataggcagtggcttggttaagggaac 2393
>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast gene for chloroplast product Length = 3322 Score = 791 bits (399), Expect = 0.0 Identities = 542/583 (92%), Gaps = 10/583 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 ||||||||| || |||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 547 aagggcgtattaatcgacgaaatgcttcgggg-agttgaaaataagccgagatccggag- 604 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| |||||| |||||||| |||| | ||||||||||||| ||||||||||||||| Sbjct: 605 attcccgaatagggcaacctttcgaacttc-tgctgaatccatgggcaggcaagagacaa 663 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 664 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 723 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 724 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 783 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 ||||||| ||||||||||||||| | || |||||| | ||||||||||| ||||||||| Sbjct: 784 caagcgtcgtgctgctaggcgaatctgtggagtgcggtaccctagatggtgaaagtccag 843 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 844 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 903 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 904 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagccaaa 963 Query: 421 tagta-ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 479 ||||| ||||||||||||||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 964 tagtacccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 1023 Query: 480 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 539 ||| | ||||| |||||||||||||| || || |||||||||||||||||||||| Sbjct: 1024 ccg---taagctctcaagcagtgggaggagacag---gctctgaccgcgtgcctgttgaa 1077 Query: 540 gaatgagccggcgactcataggcagtggcttggttaagggaac 582 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1078 gaatgagccggcgactcataggcagtggcttggttaagggaac 1120
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 783 bits (395), Expect = 0.0 Identities = 481/505 (95%), Gaps = 6/505 (1%) Strand = Plus / Minus Query: 3 gggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagnat 62 |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 130482 gggcgtagtaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag-at 130425 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||||||||||| |||| | ||||||||||||| ||||||||||||||||| Sbjct: 130424 tcccgaataggtcaacctttcgaactac-tgctgaatccatgggcaggcaagagacaacc 130366 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130365 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 130306 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 130305 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagctataca 130246 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 ||||| |||||||||||||||||||| ||||||||||||||||||||| | ||||||||| Sbjct: 130245 agcgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtccagta 130186 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130185 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 130126 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 130125 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagta 130066 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 130065 gtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 130006 Query: 483 tgctgagctcccaagcagtgggagg 507 | |||||||||||||||||||| Sbjct: 130005 ---taagctcccaagcagtgggagg 129984 Score = 783 bits (395), Expect = 0.0 Identities = 481/505 (95%), Gaps = 6/505 (1%) Strand = Plus / Plus Query: 3 gggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagnat 62 |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 101974 gggcgtagtaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag-at 102031 Query: 63 tcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacc 122 |||| ||||||||||||||| |||| | ||||||||||||| ||||||||||||||||| Sbjct: 102032 tcccgaataggtcaacctttcgaactac-tgctgaatccatgggcaggcaagagacaacc 102090 Query: 123 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 182 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102091 tggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagta 102150 Query: 183 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaataca 242 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 102151 gcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagctataca 102210 Query: 243 agcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagta 302 ||||| |||||||||||||||||||| ||||||||||||||||||||| | ||||||||| Sbjct: 102211 agcgtcgtgctgctaggcgaagcggtggagtgccgcaccctagatggcgagagtccagta 102270 Query: 303 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 362 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102271 gccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgt 102330 Query: 363 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagta 422 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 102331 gtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtgaagta 102390 Query: 423 gtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccg 482 |||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||||| Sbjct: 102391 gtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaaccg 102450 Query: 483 tgctgagctcccaagcagtgggagg 507 | |||||||||||||||||||| Sbjct: 102451 ---taagctcccaagcagtgggagg 102472 Score = 119 bits (60), Expect = 1e-23 Identities = 63/64 (98%) Strand = Plus / Minus Query: 518 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 577 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 129969 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggttaag 129910 Query: 578 ggaa 581 |||| Sbjct: 129909 ggaa 129906 Score = 119 bits (60), Expect = 1e-23 Identities = 63/64 (98%) Strand = Plus / Plus Query: 518 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 577 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 102487 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggtagtggcttggttaag 102546 Query: 578 ggaa 581 |||| Sbjct: 102547 ggaa 102550
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 779 bits (393), Expect = 0.0 Identities = 544/585 (92%), Gaps = 11/585 (1%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||| | Sbjct: 131820 aagggcgtagtaagcgacgaaatgcttcgggg-agttgaaaataagcgtagatccgg-gg 131763 Query: 61 attcccaa-ataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagaca 119 |||||| | |||||||||||||| |||||| ||||||||||| | |||||||||||||| Sbjct: 131762 attcccgatataggtcaacctttcgaactgc-tgctgaatccacgggcaggcaagagaca 131704 Query: 120 acctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 179 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131703 acctggtgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 131644 Query: 180 gtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaat 239 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 131643 gtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagctat 131584 Query: 240 acaagcgttgtgctgctaggcgaagcggttgag--tgccgcaccctagatggctaaagtc 297 ||||| || ||||||||||||||||| | ||| ||| |||||||||||||| | |||| Sbjct: 131583 acaagtgtcgtgctgctaggcgaagcagcagagaatgctgcaccctagatggcgagagtc 131524 Query: 298 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 357 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 131523 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 131464 Query: 358 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 131463 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtg 131404 Query: 418 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 477 ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 131403 aagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatga 131344 Query: 478 aaccgtgctgagctcccaagcagtgggagg-ggaaagtgatctctgaccgcgtgcctgtt 536 ||||| | |||||||||||||||||||| || | || ||||||||||||||||||| Sbjct: 131343 aaccg---taagctcccaagcagtgggaggaggctcggga-ctctgaccgcgtgcctgtt 131288 Query: 537 gaagaatgagccggcgactcataggcagtggcttggttaagggaa 581 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 131287 gaagaatgagccggcgactcataggcagtggcttggttaagggaa 131243 Score = 779 bits (393), Expect = 0.0 Identities = 544/585 (92%), Gaps = 11/585 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||| | Sbjct: 103574 aagggcgtagtaagcgacgaaatgcttcgggg-agttgaaaataagcgtagatccgg-gg 103631 Query: 61 attcccaa-ataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagaca 119 |||||| | |||||||||||||| |||||| ||||||||||| | |||||||||||||| Sbjct: 103632 attcccgatataggtcaacctttcgaactgc-tgctgaatccacgggcaggcaagagaca 103690 Query: 120 acctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 179 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 103691 acctggtgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 103750 Query: 180 gtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaat 239 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 103751 gtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagctat 103810 Query: 240 acaagcgttgtgctgctaggcgaagcggttgag--tgccgcaccctagatggctaaagtc 297 ||||| || ||||||||||||||||| | ||| ||| |||||||||||||| | |||| Sbjct: 103811 acaagtgtcgtgctgctaggcgaagcagcagagaatgctgcaccctagatggcgagagtc 103870 Query: 298 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 357 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 103871 cagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaat 103930 Query: 358 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcg 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 103931 cccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagtg 103990 Query: 418 aagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtga 477 ||||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||| Sbjct: 103991 aagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatga 104050 Query: 478 aaccgtgctgagctcccaagcagtgggagg-ggaaagtgatctctgaccgcgtgcctgtt 536 ||||| | |||||||||||||||||||| || | || ||||||||||||||||||| Sbjct: 104051 aaccg---taagctcccaagcagtgggaggaggctcggga-ctctgaccgcgtgcctgtt 104106 Query: 537 gaagaatgagccggcgactcataggcagtggcttggttaagggaa 581 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 104107 gaagaatgagccggcgactcataggcagtggcttggttaagggaa 104151
>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes Length = 3166 Score = 779 bits (393), Expect = 0.0 Identities = 544/584 (93%), Gaps = 14/584 (2%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| || |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 151 aagggcgtagtaatcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 208 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 209 attcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 267 Query: 121 cctggcgaactgaaacatcttagt-agccagaggaaaagaaagcaaaagcgattcccgta 179 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 268 cctggcgaactgaaacatcttagtgagccagaggaaaagaaagcaaaagcgattcccgta 327 Query: 180 gtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaat 239 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 328 gtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggg-ttgtgggagagcaat 386 Query: 240 acaagcgttgtgctgctaggcgaag-cggttgagtgccgcaccctagatggctaaagtcc 298 |||||||| |||||||||||||||| || || ||| |||||||||||||| ||||||| Sbjct: 387 acaagcgtcgtgctgctaggcgaagacgcccgaatgctgcaccctagatggcgaaagtcc 446 Query: 299 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 358 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 447 agtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 506 Query: 359 ccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 418 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 507 ccgtgtgaatcgacaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcga 566 Query: 419 agtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaa 478 |||||||||||||||||| ||||||||||| ||||| ||| ||||||||||||| |||| Sbjct: 567 agtagtaccgtgagggaagggtgaaaagaa-ccccatcggggagtgaaatagaacatgaa 625 Query: 479 accgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttga 538 |||| | |||||||||||||||||||| | | ||||||||||||||||||||| Sbjct: 626 accg---taagctcccaagcagtgggaggcca----gggctctgaccgcgtgcctgttga 678 Query: 539 agaatgagccggcgactcataggcagtggcttggttaagggaac 582 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 679 agaatgagccggcgactcataggcagtggcttggttaagggaac 722
>gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2899 Score = 773 bits (390), Expect = 0.0 Identities = 538/582 (92%), Gaps = 9/582 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 ||||||||| || |||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 59 aagggcgtattaatcgacgaaatgcttcgggg-agttgaaaataagccgagatccggag- 116 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| |||||| |||||||| |||| | ||||||||||||| ||||||||||||||| Sbjct: 117 attcccgaatagggcaacctttcgaacttc-tgctgaatccatgggcaggcaagagacaa 175 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 176 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 235 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 236 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 295 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 ||||||| ||||||||||||||| | || |||||| | ||||||||||| ||||||||| Sbjct: 296 caagcgtcgtgctgctaggcgaatctgtggagtgcggtaccctagatggtgaaagtccag 355 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 356 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 415 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 416 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 475 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 || ||||||||||||| ||||||||||||||||| ||| ||||||||| ||| |||||| Sbjct: 476 taataccgtgagggaagggtgaaaagaacccccatcggggagtgaaataaaacatgaaac 535 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 || | ||||| |||||||||||||| || || |||||| ||||||||||||||| Sbjct: 536 cg---taagctctcaagcagtgggaggagacag---gctctgaacgcgtgcctgttgaaa 589 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaac 582 ||||||||||||||||||| |||||||||||||||||||||| Sbjct: 590 aatgagccggcgactcatacgcagtggcttggttaagggaac 631
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 771 bits (389), Expect = 0.0 Identities = 481/507 (94%), Gaps = 6/507 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 ||||||||| || |||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 46303 aagggcgtattaatcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 46360 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||||||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 46361 attcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 46419 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 46420 cctggcgaactgaaacatcttactagccagaggaaaagaaagcaaaagcgattcccgtag 46479 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 46480 tagcggcgagcgaaatgggaacagcctaaaccgtgaaaacggggttgtgggagagcaata 46539 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 ||||||| |||||||||||||||||||| |||| |||||||||||||||||| ||||||| Sbjct: 46540 caagcgtcgtgctgctaggcgaagcggtggagtaccgcaccctagatggctagagtccag 46599 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46600 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 46659 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46660 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 46719 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 46720 tagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 46779 Query: 481 cgtgctgagctcccaagcagtgggagg 507 || | ||||| |||||||||||||| Sbjct: 46780 cg---taagctctcaagcagtgggagg 46803 Score = 129 bits (65), Expect = 1e-26 Identities = 65/65 (100%) Strand = Plus / Plus Query: 518 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 577 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 46818 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 46877 Query: 578 ggaac 582 ||||| Sbjct: 46878 ggaac 46882
>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2867 Score = 771 bits (389), Expect = 0.0 Identities = 481/507 (94%), Gaps = 6/507 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 59 aagggcgtagtaagcgacgaaatgcttcgggg-agttgaaaataagcgtagatccggag- 116 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||| Sbjct: 117 attcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaa 175 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 176 cctggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcccgtag 235 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 236 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 295 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 ||||||| |||||||||||||||||||| |||||| |||||||||||||| | ||||||| Sbjct: 296 caagcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccag 355 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 356 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 415 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 416 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 475 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 || ||||||||||||| ||||||||||||||||| ||| ||||||||| ||| |||||| Sbjct: 476 tactaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataaaacatgaaac 535 Query: 481 cgtgctgagctcccaagcagtgggagg 507 || | |||||||||||||||||||| Sbjct: 536 cg---taagctcccaagcagtgggagg 559 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 552 gactcataggcagtggcttggttaagggaac 582 ||||||||| |||||||||||||||||||| Sbjct: 592 gactcatagtaagtggcttggttaagggaac 622
>gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2883 Score = 771 bits (389), Expect = 0.0 Identities = 481/507 (94%), Gaps = 6/507 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 59 aagggcgtagtaagcgacgaaatgcttcgggg-agttgaaaataagcgtagatccggag- 116 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||| Sbjct: 117 attcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaa 175 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 176 cctggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcccgtag 235 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 236 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 295 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 ||||||| |||||||||||||||||||| |||||| |||||||||||||| | ||||||| Sbjct: 296 caagcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccag 355 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 356 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 415 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 416 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 475 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 || ||||||||||||| ||||||||||||||||| || ||||||||||||| |||||| Sbjct: 476 tactaccgtgagggaagggtgaaaagaacccccatccgggagtgaaatagaacatgaaac 535 Query: 481 cgtgctgagctcccaagcagtgggagg 507 || | |||||||||||||||||||| Sbjct: 536 cg---taagctcccaagcagtgggagg 559 Score = 105 bits (53), Expect = 2e-19 Identities = 62/65 (95%) Strand = Plus / Plus Query: 518 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 577 |||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaagaattaaccggcgactcataggcagtggcttggttaag 640 Query: 578 ggaac 582 ||||| Sbjct: 641 ggaac 645
>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2902 Score = 765 bits (386), Expect = 0.0 Identities = 480/507 (94%), Gaps = 6/507 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||| Sbjct: 59 aagggcgtagtaagcgacgaaatgcttcggggg-gttgaaaataagcgtagatccggag- 116 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||| Sbjct: 117 attcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaa 175 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 176 cctggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcccgtag 235 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 236 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 295 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 ||||||| |||||||||||||||||||| |||||| |||||||||||||| | ||||||| Sbjct: 296 caagcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccag 355 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 356 tagccgaaagcatccctagcttacgctctgacccgagtagcatggggcacgtggaatccc 415 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 416 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 475 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 || ||||||||||||| ||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 476 taataccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 535 Query: 481 cgtgctgagctcccaagcagtgggagg 507 || | |||||||||||||||||||| Sbjct: 536 cg---taagctcccaagcagtgggagg 559 Score = 97.6 bits (49), Expect = 4e-17 Identities = 62/65 (95%), Gaps = 1/65 (1%) Strand = Plus / Plus Query: 518 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 577 |||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaa-aatgagccggcgactcataggaagtggcttggttaag 639 Query: 578 ggaac 582 ||||| Sbjct: 640 ggaac 644
>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2913 Score = 763 bits (385), Expect = 0.0 Identities = 480/507 (94%), Gaps = 6/507 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 59 aagggcgtagtaagcgacgaaatgcttcgggg-agttgaaaataagcgtagatccggag- 116 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||| Sbjct: 117 attcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaa 175 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 176 cctggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcccgtag 235 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 236 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 295 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 ||||||| |||||||||||||||||||| |||||| |||||||||||||| | ||||||| Sbjct: 296 caagcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccag 355 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 356 tagccgaaagcatccctagcttacgctctgacccgagtagcatggggcacgtggaatccc 415 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 416 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 475 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 || ||||||||||||| ||||||||||||||||| || ||||||||||||| |||||| Sbjct: 476 taataccgtgagggaagggtgaaaagaacccccatccgggagtgaaatagaacatgaaac 535 Query: 481 cgtgctgagctcccaagcagtgggagg 507 || | |||||||||||||||||||| Sbjct: 536 cg---taagctcccaagcagtgggagg 559 Score = 61.9 bits (31), Expect = 2e-06 Identities = 53/59 (89%), Gaps = 1/59 (1%) Strand = Plus / Plus Query: 518 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 576 |||||| ||||||||||||||| ||||| || |||| ||||| |||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgttgaaaaatga-cccgcgaatcataagcagtggcttggttaa 638
>gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2894 Score = 763 bits (385), Expect = 0.0 Identities = 480/507 (94%), Gaps = 6/507 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 59 aagggcgtagtaagcgacgaaatgcttcgggg-agttgaaaataagcgtagatccggag- 116 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||| Sbjct: 117 attcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaa 175 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 176 cctggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcccgtag 235 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 236 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 295 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 ||||||| |||||||||||||||||||| |||||| |||||||||||||| | ||||||| Sbjct: 296 caagcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtccag 355 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 356 tagccgaaagcatccctagcttacgctctgacccgagtagcatggggcacgtggaatccc 415 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 416 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 475 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 || ||||||||||||| ||||||||||||||||| ||| ||||||||| ||| |||||| Sbjct: 476 taataccgtgagggaagggtgaaaagaacccccatcggggagtgaaataaaacatgaaac 535 Query: 481 cgtgctgagctcccaagcagtgggagg 507 || | |||||||||||||||||||| Sbjct: 536 cg---taagctcccaagcagtgggagg 559 Score = 81.8 bits (41), Expect = 2e-12 Identities = 60/65 (92%), Gaps = 1/65 (1%) Strand = Plus / Plus Query: 518 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 577 |||||| |||||||||||| || ||||||||| ||||||||||| ||||||||||||||| Sbjct: 581 ctctgaacgcgtgcctgtttaaaaatgagccg-cgactcataggaagtggcttggttaag 639 Query: 578 ggaac 582 ||||| Sbjct: 640 ggaac 644
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 761 bits (384), Expect = 0.0 Identities = 528/569 (92%), Gaps = 9/569 (1%) Strand = Plus / Minus Query: 15 cgacgaaatgcttcggggnagttgaaaataagcatagatccggagnattcccaaataggt 74 |||||||||||||||||| |||||||||||||||||||||||||| |||||| |||||| Sbjct: 52621 cgacgaaatgcttcgggg-agttgaaaataagcatagatccggag-attcccgaataggg 52564 Query: 75 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 134 ||||||||| |||||| ||||||||||||| |||| ||||||| |||||||||||||||| Sbjct: 52563 caaccttttgaactgc-tgctgaatccatgggcagacaagagataacctggcgaactgaa 52505 Query: 135 acatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaa 194 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 52504 acatcttagtagccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaa 52445 Query: 195 atgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctg 254 ||||||||||||||||||| |||||||||||||||||||||||||| ||| || |||||| Sbjct: 52444 atgggagcagcctaaaccgcgaaaacggggttgtgggagagcaataaaagtgtcgtgctg 52385 Query: 255 ctaggcgaa-gcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcat 313 ||||||||| | | |||| ||| |||||||||||||| |||||||||||||||||||||| Sbjct: 52384 ctaggcgaacgagcttgaatgctgcaccctagatggcgaaagtccagtagccgaaagcat 52325 Query: 314 cactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagca 373 || |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 52324 cattagcttgtgctctgacccgagtagcatgggacacgtggaatcccgtgtgaatcagca 52265 Query: 374 aggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagg 433 ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 52264 aggaccaccttgcaaggctaaatactcctgggtaaccgatagttaagtagtaccgtgagg 52205 Query: 434 gaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcc 493 ||| ||||||||||||||||| |||| ||||||||||||| |||||||| | |||||| Sbjct: 52204 gaagggtgaaaagaacccccattggggagtgaaatagaacatgaaaccg---taagctcc 52148 Query: 494 caagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcga 553 |||||||||||||| | || | |||||||||||||||||||||||||||||||||||| Sbjct: 52147 caagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcga 52090 Query: 554 ctcataggcagtggcttggttaagggaac 582 ||||||||||| ||||||||||||||||| Sbjct: 52089 ctcataggcagcggcttggttaagggaac 52061 Score = 761 bits (384), Expect = 0.0 Identities = 528/569 (92%), Gaps = 9/569 (1%) Strand = Plus / Plus Query: 15 cgacgaaatgcttcggggnagttgaaaataagcatagatccggagnattcccaaataggt 74 |||||||||||||||||| |||||||||||||||||||||||||| |||||| |||||| Sbjct: 37207 cgacgaaatgcttcgggg-agttgaaaataagcatagatccggag-attcccgaataggg 37264 Query: 75 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 134 ||||||||| |||||| ||||||||||||| |||| ||||||| |||||||||||||||| Sbjct: 37265 caaccttttgaactgc-tgctgaatccatgggcagacaagagataacctggcgaactgaa 37323 Query: 135 acatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaa 194 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 37324 acatcttagtagccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaa 37383 Query: 195 atgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctg 254 ||||||||||||||||||| |||||||||||||||||||||||||| ||| || |||||| Sbjct: 37384 atgggagcagcctaaaccgcgaaaacggggttgtgggagagcaataaaagtgtcgtgctg 37443 Query: 255 ctaggcgaa-gcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcat 313 ||||||||| | | |||| ||| |||||||||||||| |||||||||||||||||||||| Sbjct: 37444 ctaggcgaacgagcttgaatgctgcaccctagatggcgaaagtccagtagccgaaagcat 37503 Query: 314 cactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagca 373 || |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 37504 cattagcttgtgctctgacccgagtagcatgggacacgtggaatcccgtgtgaatcagca 37563 Query: 374 aggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagg 433 ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 37564 aggaccaccttgcaaggctaaatactcctgggtaaccgatagttaagtagtaccgtgagg 37623 Query: 434 gaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcc 493 ||| ||||||||||||||||| |||| ||||||||||||| |||||||| | |||||| Sbjct: 37624 gaagggtgaaaagaacccccattggggagtgaaatagaacatgaaaccg---taagctcc 37680 Query: 494 caagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcga 553 |||||||||||||| | || | |||||||||||||||||||||||||||||||||||| Sbjct: 37681 caagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcga 37738 Query: 554 ctcataggcagtggcttggttaagggaac 582 ||||||||||| ||||||||||||||||| Sbjct: 37739 ctcataggcagcggcttggttaagggaac 37767
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 761 bits (384), Expect = 0.0 Identities = 528/569 (92%), Gaps = 9/569 (1%) Strand = Plus / Plus Query: 15 cgacgaaatgcttcggggnagttgaaaataagcatagatccggagnattcccaaataggt 74 |||||||||||||||||| |||||||||||||||||||||||||| |||||| |||||| Sbjct: 4135 cgacgaaatgcttcgggg-agttgaaaataagcatagatccggag-attcccgaataggg 4192 Query: 75 caaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaa 134 ||||||||| |||||| ||||||||||||| |||| ||||||| |||||||||||||||| Sbjct: 4193 caaccttttgaactgc-tgctgaatccatgggcagacaagagataacctggcgaactgaa 4251 Query: 135 acatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaa 194 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 4252 acatcttagtagccagaggaaaagaaagcaaaagcgattcccatagtagcggcgagcgaa 4311 Query: 195 atgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctg 254 ||||||||||||||||||| |||||||||||||||||||||||||| ||| || |||||| Sbjct: 4312 atgggagcagcctaaaccgcgaaaacggggttgtgggagagcaataaaagtgtcgtgctg 4371 Query: 255 ctaggcgaa-gcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcat 313 ||||||||| | | |||| ||| |||||||||||||| |||||||||||||||||||||| Sbjct: 4372 ctaggcgaacgagcttgaatgctgcaccctagatggcgaaagtccagtagccgaaagcat 4431 Query: 314 cactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagca 373 || |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 4432 cattagcttgtgctctgacccgagtagcatgggacacgtggaatcccgtgtgaatcagca 4491 Query: 374 aggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagg 433 ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 4492 aggaccaccttgcaaggctaaatactcctgggtaaccgatagttaagtagtaccgtgagg 4551 Query: 434 gaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcc 493 ||| ||||||||||||||||| |||| ||||||||||||| |||||||| | |||||| Sbjct: 4552 gaagggtgaaaagaacccccattggggagtgaaatagaacatgaaaccg---taagctcc 4608 Query: 494 caagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcga 553 |||||||||||||| | || | |||||||||||||||||||||||||||||||||||| Sbjct: 4609 caagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcga 4666 Query: 554 ctcataggcagtggcttggttaagggaac 582 ||||||||||| ||||||||||||||||| Sbjct: 4667 ctcataggcagcggcttggttaagggaac 4695
>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome Length = 138829 Score = 759 bits (383), Expect = 0.0 Identities = 540/588 (91%), Gaps = 12/588 (2%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 ||||||||||||| |||||||||||||||||| || |||||| |||||||||||||||| Sbjct: 128395 aagggcgtagcaatcgacgaaatgcttcgggg-agctgaaaacaagcatagatccggag- 128338 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||| |||||||| |||||| |||||||| ||| ||||||||||||||| Sbjct: 128337 attcccgaataggttaaccttttgaactgc-tgctgaattcataggcaggcaagagacaa 128279 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 128278 cctggcgaactgaaacatcttagtagccagaggaaaggaaagcaaacgcgattcccgtag 128219 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc---- 236 |||||||||||||| |||||| ||||||||||||||||||||||||||||| |||| Sbjct: 128218 tagcggcgagcgaagtgggagtagcctaaaccgtgaaaacggggttgtgggggagcgata 128159 Query: 237 --aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 294 ||||||||| ||||||||||||||||||||||||||| |||||||||||||||| | | Sbjct: 128158 caaatacaagctttgtgctgctaggcgaagcggttgagtcccgcaccctagatggcaaga 128099 Query: 295 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 354 ||||||||||||||||||||||||||| | ||||| |||| ||||||||||||||||||| Sbjct: 128098 gtccagtagccgaaagcatcactagctcacgctctaacccaagtagcatggggcacgtgg 128039 Query: 355 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 414 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128038 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 127979 Query: 415 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 474 |||||| ||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 127978 gcgaagcagtaccgtgagggaagggtgaaaagaacccccataggggagtgaaatagaaca 127919 Query: 475 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 534 |||||||| | |||||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 127918 tgaaaccg---taagctcccaagcagtgggaggagaattggatctctgaccgcatgcctg 127862 Query: 535 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaac 582 |||| ||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 127861 ttgaggaatgagccggcgactcataggcagtggcctggttaagggaac 127814 Score = 759 bits (383), Expect = 0.0 Identities = 540/588 (91%), Gaps = 12/588 (2%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 ||||||||||||| |||||||||||||||||| || |||||| |||||||||||||||| Sbjct: 95052 aagggcgtagcaatcgacgaaatgcttcgggg-agctgaaaacaagcatagatccggag- 95109 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||| |||||||| |||||| |||||||| ||| ||||||||||||||| Sbjct: 95110 attcccgaataggttaaccttttgaactgc-tgctgaattcataggcaggcaagagacaa 95168 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 95169 cctggcgaactgaaacatcttagtagccagaggaaaggaaagcaaacgcgattcccgtag 95228 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc---- 236 |||||||||||||| |||||| ||||||||||||||||||||||||||||| |||| Sbjct: 95229 tagcggcgagcgaagtgggagtagcctaaaccgtgaaaacggggttgtgggggagcgata 95288 Query: 237 --aatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 294 ||||||||| ||||||||||||||||||||||||||| |||||||||||||||| | | Sbjct: 95289 caaatacaagctttgtgctgctaggcgaagcggttgagtcccgcaccctagatggcaaga 95348 Query: 295 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 354 ||||||||||||||||||||||||||| | ||||| |||| ||||||||||||||||||| Sbjct: 95349 gtccagtagccgaaagcatcactagctcacgctctaacccaagtagcatggggcacgtgg 95408 Query: 355 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 414 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 95409 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 95468 Query: 415 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 474 |||||| ||||||||||||||| ||||||||||||||||| ||| ||||||||||||| Sbjct: 95469 gcgaagcagtaccgtgagggaagggtgaaaagaacccccataggggagtgaaatagaaca 95528 Query: 475 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 534 |||||||| | |||||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 95529 tgaaaccg---taagctcccaagcagtgggaggagaattggatctctgaccgcatgcctg 95585 Query: 535 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaac 582 |||| ||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 95586 ttgaggaatgagccggcgactcataggcagtggcctggttaagggaac 95633
>emb|AJ538560.1|NTA538560 Nicotiana tabacum cDNA-AFLP-fragment BC3-M22-001 Length = 501 Score = 755 bits (381), Expect = 0.0 Identities = 462/486 (95%), Gaps = 6/486 (1%) Strand = Plus / Plus Query: 91 ctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccag 150 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 17 ctgctgaatccatgggcaggcaagagacaacctggcgaactgaaacatcttagtagccag 76 Query: 151 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 210 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77 aggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaa 136 Query: 211 ccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggtt- 269 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct: 137 ccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgctaggcgaagcagccc 196 Query: 270 gagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctct 329 || ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 197 gaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctct 256 Query: 330 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 389 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 257 gacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaag 316 Query: 390 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaac 449 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 317 gctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaac 376 Query: 450 ccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 509 ||||| ||| ||||||||||||| |||||||| | |||||||||||||||||||| | Sbjct: 377 ccccatcggggagtgaaatagaacatgaaaccg---taagctcccaagcagtgggaggag 433 Query: 510 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 569 || | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 434 ccaggg--ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 491 Query: 570 tggtta 575 |||||| Sbjct: 492 tggtta 497
>emb|AJ538655.1|NTA538655 Nicotiana tabacum cDNA-AFLP-fragment BC34-M2-001 Length = 512 Score = 753 bits (380), Expect = 0.0 Identities = 483/513 (94%), Gaps = 7/513 (1%) Strand = Plus / Minus Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| |||||| |||||||| |||||| ||||||||||||| ||||||||||||||| Sbjct: 507 attcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagacaa 449 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 448 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 389 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 388 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 329 Query: 241 caagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctagatggctaaagtcca 299 ||||||| ||||||||||||||||| | || ||| |||||||||||||| |||||||| Sbjct: 328 caagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtcca 269 Query: 300 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 268 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 209 Query: 360 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 419 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 208 cgtgtgaatcagcaaggaccgccttgcaaggctaaatactcctgggtgaccgatagcgaa 149 Query: 420 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 479 ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 148 gtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 89 Query: 480 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 539 ||| | |||||||||||||||||||| | || | |||||||||||||||||||||| Sbjct: 88 ccg---taagctcccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaa 34 Query: 540 gaatgagccggcgactcataggcagtggcttgg 572 ||||||||||||||||||||||||||||||||| Sbjct: 33 gaatgagccggcgactcataggcagtggcttgg 1
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 749 bits (378), Expect = 0.0 Identities = 534/580 (92%), Gaps = 7/580 (1%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| || |||||||||| |||||||||||| Sbjct: 116158 aagggcgtagcaagcgacgaaatgcttcgggg-agctgaaaataagtatagatccggag- 116101 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||| ||||||| ||||||| |||||||| ||| |||| |||||||||| Sbjct: 116100 attcccgaataggttaacctttgaaactgc-tgctgaattcataggcagacaagagacaa 116042 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 116041 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattctcgtag 115982 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||| |||||||||||||||||||||| ||||||| |||| | | Sbjct: 115981 tagcggcgagcgaaatgggaacagcctaaaccgtgaaaacggg-ttgtgggggagctaaa 115923 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 ||| |||||| ||||||||||||| ||||||| | ||||||||||||| ||||||||| Sbjct: 115922 taagtgttgtgttgctaggcgaagcagttgagtcctgcaccctagatggtgaaagtccag 115863 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 || ||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 115862 taaccgaaagcagcactagcttaggctctaacccgagtagcatggggcacgtggaatccc 115803 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 115802 gtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcgaag 115743 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 115742 tagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 115683 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 || | |||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 115682 cg---taagctcccaagcagtgggaggagaattgaatctctgaccgcgtgcctgttgaag 115626 Query: 541 aatgagccggcgactcataggcagtggcttggttaaggga 580 ||||||||||||||| |||||||||||| ||||||||||| Sbjct: 115625 aatgagccggcgacttataggcagtggcctggttaaggga 115586 Score = 749 bits (378), Expect = 0.0 Identities = 534/580 (92%), Gaps = 7/580 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| || |||||||||| |||||||||||| Sbjct: 85962 aagggcgtagcaagcgacgaaatgcttcgggg-agctgaaaataagtatagatccggag- 86019 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||| ||||||| ||||||| |||||||| ||| |||| |||||||||| Sbjct: 86020 attcccgaataggttaacctttgaaactgc-tgctgaattcataggcagacaagagacaa 86078 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 86079 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattctcgtag 86138 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||| |||||||||||||||||||||| ||||||| |||| | | Sbjct: 86139 tagcggcgagcgaaatgggaacagcctaaaccgtgaaaacggg-ttgtgggggagctaaa 86197 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 ||| |||||| ||||||||||||| ||||||| | ||||||||||||| ||||||||| Sbjct: 86198 taagtgttgtgttgctaggcgaagcagttgagtcctgcaccctagatggtgaaagtccag 86257 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 || ||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct: 86258 taaccgaaagcagcactagcttaggctctaacccgagtagcatggggcacgtggaatccc 86317 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 86318 gtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcgaag 86377 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 86378 tagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 86437 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 || | |||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 86438 cg---taagctcccaagcagtgggaggagaattgaatctctgaccgcgtgcctgttgaag 86494 Query: 541 aatgagccggcgactcataggcagtggcttggttaaggga 580 ||||||||||||||| |||||||||||| ||||||||||| Sbjct: 86495 aatgagccggcgacttataggcagtggcctggttaaggga 86534
>gb|AF497435.1| Gossypium hirsutum clone T1F05 unknown chloroplast sequence Length = 640 Score = 749 bits (378), Expect = 0.0 Identities = 509/546 (93%), Gaps = 9/546 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 100 aagggcgtagtaagcgacgaaatgcttcgggg-agttgaaaataagcgtagatccggag- 157 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||||||||||| |||||| ||||||||||||| |||| |||||||||| Sbjct: 158 attcccgaataggtcaacctttcgaactgc-tgctgaatccatgggcagacaagagacaa 216 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 217 cctggcgaactgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccgtag 276 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 277 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 336 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||| |||||||||||||||||||| ||||||| |||||||||||| | ||||||| Sbjct: 337 aaagcgtcgtgctgctaggcgaagcggtgaagtgccgaaccctagatggcgatagtccag 396 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 397 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 456 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 457 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 516 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||| |||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 517 tagtaccgtgagggaagggtgaaaagaacccccgtcggggagtgaaatagaacatgaaac 576 Query: 481 cgtgctgagctcccaagcagtgggagg-ggaaagtgatctctgaccgcgtgcctgttgaa 539 || | ||||||||||||| |||||| | || | |||||||||||||||||||||| Sbjct: 577 cg---taagctcccaagcagngggaggagcccaggg--ctctgaccgcgtgcctgttgaa 631 Query: 540 gaatga 545 |||||| Sbjct: 632 gaatga 637
>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3020 Score = 745 bits (376), Expect = 0.0 Identities = 534/582 (91%), Gaps = 6/582 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||| Sbjct: 52 aagggcgtagcaagcgacgaaatgcttcgggg-agctgaaaataagcatggatccggag- 109 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||| |||||||| |||||| |||||||| ||| |||| |||||||||| Sbjct: 110 attcccgaataggttaaccttttgaactgc-tgctgaattcataggcagacaagagacaa 168 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 169 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccatag 228 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 229 tagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggggagcaaag 288 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 | |||||||| |||||||||||| ||||| | | ||||| ||||||| | ||||||| Sbjct: 289 taggcgttgtgtcgctaggcgaagcagttgaatcctgcaccatagatggtgagagtccag 348 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| Sbjct: 349 tagccgaaagcatcactagtttatgctctaacccgagtagcatggggcacgtggaatccc 408 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 409 gtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcgaag 468 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 469 tagtaccgtgagggaaaggtgaaaagaacccccataggggagtgaaatagaacatgaaac 528 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 || | |||||||||||||||||||| ||| ||||||||||||||||||||||||| Sbjct: 529 cg---taagctcccaagcagtgggaggagaatcgaatctctgaccgcgtgcctgttgaag 585 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaac 582 ||||||||||||||| ||||| |||||| ||||||||||||| Sbjct: 586 aatgagccggcgacttataggtagtggcctggttaagggaac 627
>dbj|AB064524.1| Physcomitrella patens subsp. patens chloroplast genes for tRNA-Ile(GAU), tRNA-Ala(UGC), 23S rRNA, partial sequence Length = 2767 Score = 739 bits (373), Expect = 0.0 Identities = 535/583 (91%), Gaps = 7/583 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 2095 aagggcgtagcaagcgacgaaatgcttcgggg-agctgaaaataagcatagatccggag- 2152 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||| |||||||| |||||| |||||||| ||| ||||||||||||||| Sbjct: 2153 attcccgaataggttaaccttttgaactgc-tgctgaattcataggcaggcaagagacaa 2211 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 2212 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccatag 2271 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | Sbjct: 2272 tagcggcgagcgaaatgggactagcctaaaccgtgaaaacggggttgtgggagagcaaaa 2331 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 ||| ||||| ||||||||||||| ||||||| | ||||||||||||| | ||||||| Sbjct: 2332 taagtgttgttttgctaggcgaagcagttgagtcctgcaccctagatggtgagagtccag 2391 Query: 301 tagccgaaagcatcacta-gcttatgctctgacccgagtagcatggggcacgtggaatcc 359 ||||||||||||| || | || ||||||| ||||||||||||||||||||||||||||| Sbjct: 2392 tagccgaaagcataacaacactcatgctctaacccgagtagcatggggcacgtggaatcc 2451 Query: 360 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 419 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 2452 cgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagtgaa 2511 Query: 420 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 479 ||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 2512 gtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 2571 Query: 480 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 539 ||| | |||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 2572 ccg---taagctcccaagcagtgggaggagaatcgaatctctgaccgcgtgcctgttgaa 2628 Query: 540 gaatgagccggcgactcataggcagtggcttggttaagggaac 582 |||||||||||||||| ||||| |||||| ||||||||||||| Sbjct: 2629 gaatgagccggcgacttataggtagtggcctggttaagggaac 2671
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 739 bits (373), Expect = 0.0 Identities = 535/583 (91%), Gaps = 7/583 (1%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 118098 aagggcgtagcaagcgacgaaatgcttcgggg-agctgaaaataagcatagatccggag- 118041 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||| |||||||| |||||| |||||||| ||| ||||||||||||||| Sbjct: 118040 attcccgaataggttaaccttttgaactgc-tgctgaattcataggcaggcaagagacaa 117982 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 117981 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccatag 117922 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | Sbjct: 117921 tagcggcgagcgaaatgggactagcctaaaccgtgaaaacggggttgtgggagagcaaaa 117862 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 ||| ||||| ||||||||||||| ||||||| | ||||||||||||| | ||||||| Sbjct: 117861 taagtgttgttttgctaggcgaagcagttgagtcctgcaccctagatggtgagagtccag 117802 Query: 301 tagccgaaagcatcacta-gcttatgctctgacccgagtagcatggggcacgtggaatcc 359 ||||||||||||| || | || ||||||| ||||||||||||||||||||||||||||| Sbjct: 117801 tagccgaaagcataacaacactcatgctctaacccgagtagcatggggcacgtggaatcc 117742 Query: 360 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 419 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 117741 cgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagtgaa 117682 Query: 420 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 479 ||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 117681 gtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 117622 Query: 480 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 539 ||| | |||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 117621 ccg---taagctcccaagcagtgggaggagaatcgaatctctgaccgcgtgcctgttgaa 117565 Query: 540 gaatgagccggcgactcataggcagtggcttggttaagggaac 582 |||||||||||||||| ||||| |||||| ||||||||||||| Sbjct: 117564 gaatgagccggcgacttataggtagtggcctggttaagggaac 117522 Score = 739 bits (373), Expect = 0.0 Identities = 535/583 (91%), Gaps = 7/583 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 90004 aagggcgtagcaagcgacgaaatgcttcgggg-agctgaaaataagcatagatccggag- 90061 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||| |||||||| |||||| |||||||| ||| ||||||||||||||| Sbjct: 90062 attcccgaataggttaaccttttgaactgc-tgctgaattcataggcaggcaagagacaa 90120 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 90121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccatag 90180 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | Sbjct: 90181 tagcggcgagcgaaatgggactagcctaaaccgtgaaaacggggttgtgggagagcaaaa 90240 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 ||| ||||| ||||||||||||| ||||||| | ||||||||||||| | ||||||| Sbjct: 90241 taagtgttgttttgctaggcgaagcagttgagtcctgcaccctagatggtgagagtccag 90300 Query: 301 tagccgaaagcatcacta-gcttatgctctgacccgagtagcatggggcacgtggaatcc 359 ||||||||||||| || | || ||||||| ||||||||||||||||||||||||||||| Sbjct: 90301 tagccgaaagcataacaacactcatgctctaacccgagtagcatggggcacgtggaatcc 90360 Query: 360 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 419 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 90361 cgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagtgaa 90420 Query: 420 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 479 ||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 90421 gtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 90480 Query: 480 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 539 ||| | |||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct: 90481 ccg---taagctcccaagcagtgggaggagaatcgaatctctgaccgcgtgcctgttgaa 90537 Query: 540 gaatgagccggcgactcataggcagtggcttggttaagggaac 582 |||||||||||||||| ||||| |||||| ||||||||||||| Sbjct: 90538 gaatgagccggcgacttataggtagtggcctggttaagggaac 90580
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 735 bits (371), Expect = 0.0 Identities = 532/581 (91%), Gaps = 6/581 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| || |||||| |||||||||||||||| Sbjct: 3941 aagggcgtagcaagcgacgaaatgcttcgggg-agctgaaaagaagcatagatccggag- 3998 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||| |||||||| |||||| |||||||| || || | ||||||||||| Sbjct: 3999 attcccgaataggttaaccttttgaactgc-tgctgaattcacaagtaagcaagagacaa 4057 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 | ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 4058 cttggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcccgtag 4117 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 4118 tagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagcaata 4177 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||||||||||||||| ||||| ||||||| | |||||| |||||| | ||||||| Sbjct: 4178 taagcgttgtgctgctaggtgaagcagttgagttctgcaccccagatggtgagagtccag 4237 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 |||||||||||| |||| |||| || | |||||||||||||||||||||||||||||| Sbjct: 4238 tagccgaaagcaccactgtcttacactttaacccgagtagcatggggcacgtggaatccc 4297 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4298 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 4357 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 4358 tagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaat 4417 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 || | |||| |||||||||| |||| ||| |||||||||||||||||||||||||| Sbjct: 4418 cg---taagcttccaagcagtgagaggagaatcggatctctgaccgcgtgcctgttgaag 4474 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaa 581 ||||||||||||||| |||||||||||| |||||||||||| Sbjct: 4475 aatgagccggcgacttataggcagtggcctggttaagggaa 4515
>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2989 Score = 735 bits (371), Expect = 0.0 Identities = 536/586 (91%), Gaps = 10/586 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| || |||||||||| || ||||||||| Sbjct: 52 aagggcgtagcaagcgacgaaatgcttcgggg-agctgaaaataagtatggatccggag- 109 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||| ||||||||||||||| |||||||| ||| || |||||||||||| Sbjct: 110 attcccgaataggttaaccttttaaactgc-tgctgaattcataggcgggcaagagacaa 168 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 || ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| Sbjct: 169 cccggcgaactgaaacatcttagtagccggaggaaaagaaagcaaaagcgattctcgtag 228 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||| |||||||||||||||||||||||||||| |||| ||| Sbjct: 229 tagcggcgagcgaaatgggagcggcctaaaccgtgaaaacggggttgtgggggagctata 288 Query: 241 caa----gcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagt 296 ||| || ||| ||||||||||||||| ||||||| | |||||| |||||| | ||| Sbjct: 289 caaataagcattgcgctgctaggcgaagcagttgagtcctgcaccccagatggtgagagt 348 Query: 297 ccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaa 356 |||||| |||||||||| || | |||||||||| |||||||||||||||||||||||||| Sbjct: 349 ccagtaaccgaaagcataacaatcttatgctctaacccgagtagcatggggcacgtggaa 408 Query: 357 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 416 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 409 tcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagc 468 Query: 417 gaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtg 476 |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| || Sbjct: 469 gaagtagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatg 528 Query: 477 aaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgtt 536 |||||| | |||||||||||||||||||| ||| |||||||||||||||||||||| Sbjct: 529 aaaccg---taagctcccaagcagtgggaggagaatcggatctctgaccgcgtgcctgtt 585 Query: 537 gaagaatgagccggcgactcataggcagtggcttggttaagggaac 582 ||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct: 586 gaagaatgagccggcgacttataggcagtggcctggttaagggaac 631
>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2945 Score = 735 bits (371), Expect = 0.0 Identities = 532/581 (91%), Gaps = 6/581 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| || |||||||||| |||||||||||| Sbjct: 35 aagggcgtagcaagcgacgaaatgcttcgggg-agctgaaaataagtatagatccggag- 92 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||| ||||||||||||||| |||||||||||| || |||||||||||| Sbjct: 93 attcccgaataggttaaccttttaaactgc-tgctgaatccataggcgggcaagagacaa 151 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||| Sbjct: 152 cctggcgaactgaaacatcttagtagccggaggaagagaaagcaaaagcgattctcgtag 211 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| | | Sbjct: 212 tagcggcgagcgaaacgggagcagcctaaaccgtgaaaacggggttgtgggggagctaaa 271 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||| |||| ||||||||||||| ||||||| | ||||||||||||| | ||||||| Sbjct: 272 gaagcattgtattgctaggcgaagcagttgagtcctgcaccctagatggtgagagtccag 331 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 || |||||||||| || ||||| ||||| ||||||||| |||||||||||||||||||| Sbjct: 332 taaccgaaagcattacaagcttgggctctaacccgagtaacatggggcacgtggaatccc 391 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 392 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 451 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 452 tagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaac 511 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 || | |||| ||||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 512 cg---taagcttccaagcagtgggaggagaatcggatctctgaccgcgtgcctgttgaag 568 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaa 581 ||||||||||||||| |||||||||||| |||||||||||| Sbjct: 569 aatgagccggcgacttataggcagtggcctggttaagggaa 609
>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence Length = 2819 Score = 735 bits (371), Expect = 0.0 Identities = 532/581 (91%), Gaps = 6/581 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| || |||||| |||||||||||||||| Sbjct: 51 aagggcgtagcaagcgacgaaatgcttcgggg-agctgaaaagaagcatagatccggag- 108 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||| |||||||| |||||| |||||||| || || | ||||||||||| Sbjct: 109 attcccgaataggttaaccttttgaactgc-tgctgaattcacaagtaagcaagagacaa 167 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 | ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 168 cttggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcccgtag 227 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 228 tagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagcaata 287 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||||||||||||||| ||||| ||||||| | |||||| |||||| | ||||||| Sbjct: 288 taagcgttgtgctgctaggtgaagcagttgagttctgcaccccagatggtgagagtccag 347 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 |||||||||||| |||| |||| || | |||||||||||||||||||||||||||||| Sbjct: 348 tagccgaaagcaccactgtcttacactttaacccgagtagcatggggcacgtggaatccc 407 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 408 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 467 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 468 tagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaat 527 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 || | |||| |||||||||| |||| ||| |||||||||||||||||||||||||| Sbjct: 528 cg---taagcttccaagcagtgagaggagaatcggatctctgaccgcgtgcctgttgaag 584 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaa 581 ||||||||||||||| |||||||||||| |||||||||||| Sbjct: 585 aatgagccggcgacttataggcagtggcctggttaagggaa 625
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 735 bits (371), Expect = 0.0 Identities = 532/581 (91%), Gaps = 6/581 (1%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| || |||||| |||||||||||||||| Sbjct: 151194 aagggcgtagcaagcgacgaaatgcttcgggg-agctgaaaagaagcatagatccggag- 151137 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||| |||||||| |||||| |||||||| || || | ||||||||||| Sbjct: 151136 attcccgaataggttaaccttttgaactgc-tgctgaattcacaagtaagcaagagacaa 151078 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 | ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 151077 cttggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcccgtag 151018 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 151017 tagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagcaata 150958 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||||||||||||||| ||||| ||||||| | |||||| |||||| | ||||||| Sbjct: 150957 taagcgttgtgctgctaggtgaagcagttgagttctgcaccccagatggtgagagtccag 150898 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 |||||||||||| |||| |||| || | |||||||||||||||||||||||||||||| Sbjct: 150897 tagccgaaagcaccactgtcttacactttaacccgagtagcatggggcacgtggaatccc 150838 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 150837 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 150778 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 150777 tagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaat 150718 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 || | |||| |||||||||| |||| ||| |||||||||||||||||||||||||| Sbjct: 150717 cg---taagcttccaagcagtgagaggagaatcggatctctgaccgcgtgcctgttgaag 150661 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaa 581 ||||||||||||||| |||||||||||| |||||||||||| Sbjct: 150660 aatgagccggcgacttataggcagtggcctggttaagggaa 150620 Score = 735 bits (371), Expect = 0.0 Identities = 532/581 (91%), Gaps = 6/581 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| || |||||| |||||||||||||||| Sbjct: 117472 aagggcgtagcaagcgacgaaatgcttcgggg-agctgaaaagaagcatagatccggag- 117529 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||| |||||||| |||||| |||||||| || || | ||||||||||| Sbjct: 117530 attcccgaataggttaaccttttgaactgc-tgctgaattcacaagtaagcaagagacaa 117588 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 | ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 117589 cttggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcccgtag 117648 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 117649 tagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagcaata 117708 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||||||||||||||| ||||| ||||||| | |||||| |||||| | ||||||| Sbjct: 117709 taagcgttgtgctgctaggtgaagcagttgagttctgcaccccagatggtgagagtccag 117768 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 |||||||||||| |||| |||| || | |||||||||||||||||||||||||||||| Sbjct: 117769 tagccgaaagcaccactgtcttacactttaacccgagtagcatggggcacgtggaatccc 117828 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 117829 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 117888 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 117889 tagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaat 117948 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 || | |||| |||||||||| |||| ||| |||||||||||||||||||||||||| Sbjct: 117949 cg---taagcttccaagcagtgagaggagaatcggatctctgaccgcgtgcctgttgaag 118005 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaa 581 ||||||||||||||| |||||||||||| |||||||||||| Sbjct: 118006 aatgagccggcgacttataggcagtggcctggttaagggaa 118046
>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete sequence Length = 3503 Score = 735 bits (371), Expect = 0.0 Identities = 532/581 (91%), Gaps = 6/581 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| || |||||| |||||||||||||||| Sbjct: 51 aagggcgtagcaagcgacgaaatgcttcgggg-agctgaaaagaagcatagatccggag- 108 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||| |||||||| |||||| |||||||| || || | ||||||||||| Sbjct: 109 attcccgaataggttaaccttttgaactgc-tgctgaattcacaagtaagcaagagacaa 167 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 | ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 168 cttggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcccgtag 227 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 228 tagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagcaata 287 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||||||||||||||| ||||| ||||||| | |||||| |||||| | ||||||| Sbjct: 288 taagcgttgtgctgctaggtgaagcagttgagttctgcaccccagatggtgagagtccag 347 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 |||||||||||| |||| |||| || | |||||||||||||||||||||||||||||| Sbjct: 348 tagccgaaagcaccactgtcttacactttaacccgagtagcatggggcacgtggaatccc 407 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 408 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 467 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 468 tagtaccgtgagggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaat 527 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 || | |||| |||||||||| |||| ||| |||||||||||||||||||||||||| Sbjct: 528 cg---taagcttccaagcagtgagaggagaatcggatctctgaccgcgtgcctgttgaag 584 Query: 541 aatgagccggcgactcataggcagtggcttggttaagggaa 581 ||||||||||||||| |||||||||||| |||||||||||| Sbjct: 585 aatgagccggcgacttataggcagtggcctggttaagggaa 625
>dbj|AB061306.1| Citrus jambhiri mitochondrial ACRS gene for ACR toxin-sensitivity inducing protein, complete cds Length = 2303 Score = 726 bits (366), Expect = 0.0 Identities = 540/583 (92%), Gaps = 20/583 (3%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 682 aagggcgtagtaagcgacgaaatgcttcgggg-agttgaaaataagcgtagatccggag- 625 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||||| ||| |||| |||||||||||||| |||||||||||||| Sbjct: 624 attcccgaataggtca--ctt---gactg-ctgctgaatccatg-gcaggcaagagaca- 573 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaa-gcaaaagcgattcccgta 179 || |||| ||| ||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 572 -ct-gcga--tga-acatcttagtagccagaggaaaagaaaggcaaaagcgattcccgta 518 Query: 180 gtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaat 239 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 517 gtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcgat 458 Query: 240 acaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtcca 299 |||||||| |||||||||||||||||||| |||||| |||||||||||||| | |||||| Sbjct: 457 acaagcgtcgtgctgctaggcgaagcggtggagtgctgcaccctagatggcgagagtcca 398 Query: 300 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 359 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 397 gtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatcc 338 Query: 360 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 337 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 278 Query: 420 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 479 ||||||||||||||||| ||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 277 gtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaatagaacatgaaa 218 Query: 480 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 539 ||| | |||||||||||||||||||| | | | |||||||||||||||||||||| Sbjct: 217 ccg---taagctcccaagcagtgggaggagcccg-gggctctgaccgcgtgcctgttgaa 162 Query: 540 gaatgagccggcgactcataggcagtggcttggttaagggaac 582 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 161 gaatgagccggcgactcataggcagtggcttggttaagggaac 119
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 724 bits (365), Expect = 0.0 Identities = 533/583 (91%), Gaps = 7/583 (1%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| || ||||||| ||||| ||||||||| Sbjct: 146508 aagggcgtagcaagcgacgaaatgcttcgggg-agctgaaaatgagcatggatccggag- 146451 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||| |||||||| |||| | |||||||| ||| |||||| |||||||| Sbjct: 146450 attcccgaataggttaaccttttgaactac-tgctgaattcataggcaggcgagagacaa 146392 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 146391 cctggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcccgtag 146332 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 146331 tagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagcaata 146272 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 ||||||| |||||||||||||||| ||||||| | | ||||||||||| | ||||||| Sbjct: 146271 taagcgttttgctgctaggcgaagcagttgagtcctgtaccctagatggtgagagtccag 146212 Query: 301 tagccgaaagcatcactagc-ttatgctctgacccgagtagcatggggcacgtggaatcc 359 ||||||||||||||||| || |||||||| ||||||||||||||||||||| |||||| Sbjct: 146211 tagccgaaagcatcactggctttatgctccaacccgagtagcatggggcacgcagaatcc 146152 Query: 360 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 419 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || Sbjct: 146151 cgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcaaa 146092 Query: 420 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 479 |||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 146091 gtagtaccgtgagggaaaggtgaaaagaacccccgtcggggagtgaaatagaacatgaaa 146032 Query: 480 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 539 ||| | ||||||||||||||||||| ||| |||| |||||||||||||||||||| Sbjct: 146031 ccg---taggctcccaagcagtgggaggagaatcggatccctgaccgcgtgcctgttgaa 145975 Query: 540 gaatgagccggcgactcataggcagtggcttggttaagggaac 582 |||||||||||||||| |||||||||||| ||||||||||||| Sbjct: 145974 gaatgagccggcgacttataggcagtggcctggttaagggaac 145932 Score = 724 bits (365), Expect = 0.0 Identities = 533/583 (91%), Gaps = 7/583 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| || ||||||| ||||| ||||||||| Sbjct: 111954 aagggcgtagcaagcgacgaaatgcttcgggg-agctgaaaatgagcatggatccggag- 112011 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||| |||||||| |||| | |||||||| ||| |||||| |||||||| Sbjct: 112012 attcccgaataggttaaccttttgaactac-tgctgaattcataggcaggcgagagacaa 112070 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 112071 cctggcgaactgaaacatcttagtagccagaggaagagaaagcaaaagcgattcccgtag 112130 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 112131 tagcggcgagcgaaatgggagtagcctaaaccgtgaaaacggggttgtgggagagcaata 112190 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 ||||||| |||||||||||||||| ||||||| | | ||||||||||| | ||||||| Sbjct: 112191 taagcgttttgctgctaggcgaagcagttgagtcctgtaccctagatggtgagagtccag 112250 Query: 301 tagccgaaagcatcactagc-ttatgctctgacccgagtagcatggggcacgtggaatcc 359 ||||||||||||||||| || |||||||| ||||||||||||||||||||| |||||| Sbjct: 112251 tagccgaaagcatcactggctttatgctccaacccgagtagcatggggcacgcagaatcc 112310 Query: 360 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 419 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || Sbjct: 112311 cgtgtgaatcagcaaggaccaccttgtaaggctaaatactcctgggtgaccgatagcaaa 112370 Query: 420 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 479 |||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||| Sbjct: 112371 gtagtaccgtgagggaaaggtgaaaagaacccccgtcggggagtgaaatagaacatgaaa 112430 Query: 480 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 539 ||| | ||||||||||||||||||| ||| |||| |||||||||||||||||||| Sbjct: 112431 ccg---taggctcccaagcagtgggaggagaatcggatccctgaccgcgtgcctgttgaa 112487 Query: 540 gaatgagccggcgactcataggcagtggcttggttaagggaac 582 |||||||||||||||| |||||||||||| ||||||||||||| Sbjct: 112488 gaatgagccggcgacttataggcagtggcctggttaagggaac 112530
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 712 bits (359), Expect = 0.0 Identities = 398/412 (96%), Gaps = 13/412 (3%) Strand = Plus / Minus Query: 175 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 234 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75478 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 75419 Query: 235 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 294 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75418 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 75359 Query: 295 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 354 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 75358 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 75299 Query: 355 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 409 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 75298 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 75239 Query: 410 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75238 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 75179 Query: 470 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 529 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 75178 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 75127 Query: 530 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 581 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75126 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 75075 Score = 315 bits (159), Expect = 9e-83 Identities = 176/179 (98%), Gaps = 2/179 (1%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 75661 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 75604 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 75603 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 75544 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 179 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75543 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 75485 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 106 gcaggcaagagacaacctggcgaactgaaacatcttagta 145 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 430381 gcaggcaagagacaacctagcgaactgaaacatcttagta 430342 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 406 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 452 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 400814 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 400860
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 712 bits (359), Expect = 0.0 Identities = 398/412 (96%), Gaps = 13/412 (3%) Strand = Plus / Plus Query: 175 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 234 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382060 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 382119 Query: 235 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 294 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382120 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 382179 Query: 295 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 354 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 382180 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 382239 Query: 355 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 409 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 382240 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 382299 Query: 410 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382300 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 382359 Query: 470 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 529 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 382360 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 382411 Query: 530 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 581 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 382412 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 382463 Score = 315 bits (159), Expect = 9e-83 Identities = 176/179 (98%), Gaps = 2/179 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 381877 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 381934 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 381935 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 381994 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 179 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 381995 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 382053 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 106 gcaggcaagagacaacctggcgaactgaaacatcttagta 145 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 254042 gcaggcaagagacaacctagcgaactgaaacatcttagta 254081 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Plus Query: 106 gcaggcaagagacaacctggcgaactgaaacatcttagta 145 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 125350 gcaggcaagagacaacctagcgaactgaaacatcttagta 125389 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 406 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 452 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 283605 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 283559 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 406 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 452 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 154913 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 154867
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 712 bits (359), Expect = 0.0 Identities = 398/412 (96%), Gaps = 13/412 (3%) Strand = Plus / Minus Query: 175 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 234 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113569 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 113510 Query: 235 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 294 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113509 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 113450 Query: 295 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 354 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 113449 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 113390 Query: 355 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 409 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 113389 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 113330 Query: 410 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113329 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 113270 Query: 470 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 529 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 113269 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 113218 Query: 530 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 581 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113217 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 113166 Score = 315 bits (159), Expect = 9e-83 Identities = 176/179 (98%), Gaps = 2/179 (1%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 113752 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 113695 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 113694 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 113635 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 179 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 113634 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 113576 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 106 gcaggcaagagacaacctggcgaactgaaacatcttagta 145 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 323068 gcaggcaagagacaacctagcgaactgaaacatcttagta 323029 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 406 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 452 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 293448 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 293494
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 712 bits (359), Expect = 0.0 Identities = 398/412 (96%), Gaps = 13/412 (3%) Strand = Plus / Minus Query: 175 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 234 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368251 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 368192 Query: 235 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 294 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368191 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 368132 Query: 295 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 354 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 368131 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 368072 Query: 355 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 409 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 368071 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 368012 Query: 410 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368011 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 367952 Query: 470 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 529 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 367951 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 367900 Query: 530 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 581 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367899 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 367848 Score = 712 bits (359), Expect = 0.0 Identities = 398/412 (96%), Gaps = 13/412 (3%) Strand = Plus / Minus Query: 175 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 234 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184856 ccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 184797 Query: 235 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 294 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184796 gcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaa 184737 Query: 295 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 354 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 184736 gtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtgg 184677 Query: 355 aatcccgtgtgaatcagc-----aaggaccaccttgcaaggctaaatactcctgggtgac 409 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 184676 aatcccgtgtgaatcagcaaggaaaggaccaccttgcaaggctaaatactcctgggtgac 184617 Query: 410 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184616 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 184557 Query: 470 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 529 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 184556 gaacgtgaaaccgtgctgagctccc--------ggaggggaaagtgatctctgaccgcgt 184505 Query: 530 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 581 |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184504 gcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaa 184453 Score = 315 bits (159), Expect = 9e-83 Identities = 176/179 (98%), Gaps = 2/179 (1%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 368434 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 368377 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 368376 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 368317 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 179 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 368316 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 368258 Score = 315 bits (159), Expect = 9e-83 Identities = 176/179 (98%), Gaps = 2/179 (1%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 185039 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 184982 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 184981 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 184922 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 179 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184921 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 184863 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 106 gcaggcaagagacaacctggcgaactgaaacatcttagta 145 |||||||||||||||||| ||||||||||||||||||||| Sbjct: 295897 gcaggcaagagacaacctagcgaactgaaacatcttagta 295858 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Plus Query: 406 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 452 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 266283 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 266329
>gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2927 Score = 696 bits (351), Expect = 0.0 Identities = 477/513 (92%), Gaps = 7/513 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 ||||||||| || |||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 59 aagggcgtattaatcgacgaaatgcttcgggg-agttgaaaataagccgagatccggag- 116 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| |||||| |||||||| |||| | ||||||||||||| ||||||||||||||| Sbjct: 117 attcccgaatagggcaacctttcgaacttc-tgctgaatccatgggcaggcaagagacaa 175 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 176 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 235 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 236 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 295 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 ||||||| ||||||||||||||| | || |||||| | ||||||||||| ||||||||| Sbjct: 296 caagcgtcgtgctgctaggcgaatctgtggagtgcggtaccctagatggtgaaagtccag 355 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 356 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 415 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 416 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 475 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||| ||||||||||| ||||| ||| ||||||||| ||| |||||| Sbjct: 476 tagtaccgtgagggaagggtgaaaagaa-ccccatcggggagtgaaataaaacatgaaac 534 Query: 481 cgtgctgagctcccaagcagtgggaggggaaag 513 || | ||||| |||||||||||||| ||||| Sbjct: 535 cg---taagctctcaagcagtgggaggagaaag 564
>dbj|AK107856.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-B02, full insert sequence Length = 998 Score = 696 bits (351), Expect = 0.0 Identities = 364/367 (99%), Gaps = 1/367 (0%) Strand = Plus / Plus Query: 48 atagatccggagnattcccaaataggtcaaccttttaaactgcctgctgaatccatgagc 107 |||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1 atagatccggag-attcccaaataggtcaaccttttgaactgcctgctgaatccatgagc 59 Query: 108 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 60 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 119 Query: 168 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 120 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 179 Query: 228 tgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagat 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 180 tgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagat 239 Query: 288 ggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatgggg 347 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 240 ggctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatgggg 299 Query: 348 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 300 cacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtg 359 Query: 408 accgata 414 ||||||| Sbjct: 360 accgata 366
>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA genes, complete sequence; chloroplast Length = 3069 Score = 686 bits (346), Expect = 0.0 Identities = 431/453 (95%), Gaps = 6/453 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 48 aagggcgtagtaagcgacgaaatgcttcgggg-agttgaaaataagcgtagatccggag- 105 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||||||||||| ||||||| ||||||||||||| ||||||||||||||| Sbjct: 106 attcccgaataggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaa 164 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 165 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 224 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 225 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 284 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 ||||||| |||||||||||||||||||| || | | |||||||||||||| | ||||||| Sbjct: 285 caagcgtcgtgctgctaggcgaagcggtggaatactgcaccctagatggcgatagtccag 344 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 345 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 404 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 ||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||| Sbjct: 405 gtgtgaatcagcaaggaccaccttgcaaggctaaatactac--ggtgaccgatagtgaag 462 Query: 421 tagtaccgtgagggaaaggtgaaaagaaccccc 453 |||||||||||||||| |||| ||||||||||| Sbjct: 463 tagtaccgtgagggaagggtg-aaagaaccccc 494
>gb|DQ166037.1| Passiflora edulis 23S ribosomal RNA gene, partial sequence; chloroplast Length = 467 Score = 680 bits (343), Expect = 0.0 Identities = 421/443 (95%), Gaps = 3/443 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct: 28 aagggcgtagtaagcgacgaaatgcttcgggg-agttgaaaataagcgtagatccggag- 85 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||||||||||| ||||||| ||| ||||||||| ||||||||||||||| Sbjct: 86 attcccgaataggtcaacctttcaaactgc-tgccgaatccatgggcaggcaagagacaa 144 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 145 cctggcgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgattcccgtag 204 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 205 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 264 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 ||||||| ||||||||||||||||||| || ||||||||||||||| ||||||| Sbjct: 265 caagcgtcgtgctgctaggcgaagcggccgaacaccgcaccctagatggtgggagtccag 324 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 325 tagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacgtggaatccc 384 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 385 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 444 Query: 421 tagtaccgtgagggaaaggtgaa 443 |||||||||||||||| |||||| Sbjct: 445 tagtaccgtgagggaagggtgaa 467
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 646 bits (326), Expect = 0.0 Identities = 352/358 (98%), Gaps = 2/358 (0%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 123419 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaattaagcatagatccggag- 123362 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 123361 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 123302 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123301 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 123242 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123241 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 123182 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123181 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 123122 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 358 ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 123121 tagccgaaagcatcactagcttacgctctgccccgagtagcatggggcacgtggaatc 123064 Score = 442 bits (223), Expect = e-121 Identities = 235/238 (98%), Gaps = 2/238 (0%) Strand = Plus / Minus Query: 350 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122820 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 122761 Query: 410 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122760 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 122701 Query: 470 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 529 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122700 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 122641 Query: 530 gcctgttgaagaatgagccggcgactcataggca--gtggcttggttaagggaacgga 585 ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| Sbjct: 122640 gcctgttgaagaatgagccggtgactcataggcagtgtggcttggttaagggaacgga 122583
>emb|X59768.1|CA23SRR C.americana 23S rRNA gene Length = 2902 Score = 646 bits (326), Expect = 0.0 Identities = 525/583 (90%), Gaps = 10/583 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 ||||| |||| || |||||||||||||||||| ||||||||||||||||||||||| || Sbjct: 51 aagggtgtagtaatcgacgaaatgcttcgggg-agttgaaaataagcatagatccgtag- 108 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||| || ||||||| | ||||| |||| |||||||| ||||| ||||||||| Sbjct: 109 attcccgaatggggtaacctttcacactgc-tgctcaatccatgggcaggaaagagacaa 167 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| Sbjct: 168 cctggcgaactgaaacatcttagtagccagaggaaaataaagcaaaagcgattcccatag 227 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| Sbjct: 228 tagcggcgagcgaaatgggatcagcctaaaccgcgaaaacggggttgtgggagagcaata 287 Query: 241 caagcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctagatggctaaagtcca 299 |||||| ||||||||||||||||| | || | || |||||||||||||| |||||||| Sbjct: 288 aaagcgtcgtgctgctaggcgaagcagcttaaatgatgcaccctagatggcgaaagtcca 347 Query: 300 gtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcc 359 |||| | |||||||||||| || |||||||||||||||||||||| |||||| ||||| Sbjct: 348 gtagtcaaaagcatcactacgttgcgctctgacccgagtagcatgggacacgtgtaatcc 407 Query: 360 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaa 419 ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| || Sbjct: 408 cgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtaaccaatagtaaa 467 Query: 420 gtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaa 479 ||||||||||||||||| ||||||||||| ||||| |||| ||||||||||||| ||||| Sbjct: 468 gtagtaccgtgagggaagggtgaaaagaa-ccccattggggagtgaaatagaacatgaaa 526 Query: 480 ccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaa 539 ||| | |||| ||||||||||||||| | || | |||||||||||||||||||||| Sbjct: 527 ccg---taagctaccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaa 581 Query: 540 gaatgagccggcgactcataggcagtggcttggttaagggaac 582 ||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 582 gaatgagccggcgactcataggcagcggcttggttaagggaac 624
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 646 bits (326), Expect = 0.0 Identities = 352/358 (98%), Gaps = 2/358 (0%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| Sbjct: 12825960 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaattaagcatagatccggag- 12825903 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 12825902 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 12825843 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825842 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 12825783 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825782 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 12825723 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825722 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 12825663 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatc 358 ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 12825662 tagccgaaagcatcactagcttacgctctgccccgagtagcatggggcacgtggaatc 12825605 Score = 442 bits (223), Expect = e-121 Identities = 235/238 (98%), Gaps = 2/238 (0%) Strand = Plus / Minus Query: 350 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825361 cgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgac 12825302 Query: 410 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825301 cgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaata 12825242 Query: 470 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 529 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12825241 gaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgt 12825182 Query: 530 gcctgttgaagaatgagccggcgactcataggca--gtggcttggttaagggaacgga 585 ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| Sbjct: 12825181 gcctgttgaagaatgagccggtgactcataggcagtgtggcttggttaagggaacgga 12825124 Score = 87.7 bits (44), Expect = 4e-14 Identities = 56/60 (93%) Strand = Plus / Plus Query: 295 gtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtgg 354 ||||||||||||||||||||||||||||||||||||| || |||||||||| ||| |||| Sbjct: 16021783 gtccagtagccgaaagcatcactagcttatgctctgaaccaagtagcatggcgcatgtgg 16021842
>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full insert sequence Length = 2589 Score = 581 bits (293), Expect = e-162 Identities = 296/297 (99%) Strand = Plus / Plus Query: 289 gctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggc 348 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1 gctaaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggc 60 Query: 349 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 acgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtga 120 Query: 409 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 ccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaat 180 Query: 469 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 528 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 agaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcg 240 Query: 529 tgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 585 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 tgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 297
>gb|DQ160037.1| Taraxacum officinale To27-3 mRNA, partial sequence Length = 336 Score = 563 bits (284), Expect = e-157 Identities = 321/332 (96%), Gaps = 1/332 (0%) Strand = Plus / Minus Query: 76 aaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaa 135 ||||||| ||||||| ||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 335 aacctttcaaactgc-tgctgaatccatgggcaggcaggagacaacctggcgaactgaaa 277 Query: 136 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 195 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 276 catcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaa 217 Query: 196 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgtgctgc 255 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 216 tgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgtcgtgctgc 157 Query: 256 taggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatca 315 |||||||||| || || ||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 156 taggcgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatca 97 Query: 316 ctagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 375 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 96 ctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaag 37 Query: 376 gaccaccttgcaaggctaaatactcctgggtg 407 |||||||||||||||||||||||||||||||| Sbjct: 36 gaccaccttgcaaggctaaatactcctgggtg 5
>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome Length = 150568 Score = 486 bits (245), Expect = e-134 Identities = 498/579 (86%), Gaps = 5/579 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||| |||| |||||||||||||||||| || ||||||| | |||||||||||| Sbjct: 143970 aagggcgtggcaaacgacgaaatgcttcgggg-agccgaaaataggtatagatccggag- 144027 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||| |||||| |||||||||||||||| || ||||| |||||||||| Sbjct: 144028 attcccgaataggttaaccttccaaactgcctgctgaattcagaagcagacaagagacaa 144087 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 || ||||||||||||||||||||||||| ||||| | |||||||||||||||||| ||| Sbjct: 144088 cccggcgaactgaaacatcttagtagccggaggaggaaaaagcaaaagcgattcccctag 144147 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 || ||||||| |||| |||| ||||||||||||||| ||||||||||||||||| || Sbjct: 144148 taacggcgagtgaaacgggaagagcctaaaccgtgaagacggggttgtgggagagtgatg 144207 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 || | || | ||||||||||| ||||||||| |||||| |||||| | ||||||| Sbjct: 144208 agggcttcgttttactaggcgaagcagttgagtgctgcaccccagatggtgatagtccag 144267 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 |||||| ||| | |||||| | |||| |||| |||||||||||||||| |||||| Sbjct: 144268 tagccggaagtacagctagctcacgctccaacccaagtagcatggggcacgcaaaatccc 144327 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||| |||||||||||| ||||||||||| ||||| |||||||||||||||| Sbjct: 144328 gtgtgaatcagcgaggaccaccttgtaaggctaaatattcctgagtgaccgatagcgaag 144387 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 144388 cagtaccgtgagggaaaggtgaaaagaacccccgtcggggagtgaaatagaacatgaaac 144447 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 || ||||||||||||||||||||| ||| | ||||||| |||||||||||||||||| Sbjct: 144448 cg---cgagctcccaagcagtgggaggagaatgagatctctaaccgcgtgcctgttgaag 144504 Query: 541 aatgagccggcgactcataggcagtggcttggttaaggg 579 ||||||||||||||| ||||| ||||| ||||||||| Sbjct: 144505 aatgagccggcgacttgtaggcggtggcccggttaaggg 144543 Score = 486 bits (245), Expect = e-134 Identities = 498/579 (86%), Gaps = 5/579 (0%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||| |||| |||||||||||||||||| || ||||||| | |||||||||||| Sbjct: 88881 aagggcgtggcaaacgacgaaatgcttcgggg-agccgaaaataggtatagatccggag- 88824 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||| |||||| |||||||||||||||| || ||||| |||||||||| Sbjct: 88823 attcccgaataggttaaccttccaaactgcctgctgaattcagaagcagacaagagacaa 88764 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 || ||||||||||||||||||||||||| ||||| | |||||||||||||||||| ||| Sbjct: 88763 cccggcgaactgaaacatcttagtagccggaggaggaaaaagcaaaagcgattcccctag 88704 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 || ||||||| |||| |||| ||||||||||||||| ||||||||||||||||| || Sbjct: 88703 taacggcgagtgaaacgggaagagcctaaaccgtgaagacggggttgtgggagagtgatg 88644 Query: 241 caagcgttgtgctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccag 300 || | || | ||||||||||| ||||||||| |||||| |||||| | ||||||| Sbjct: 88643 agggcttcgttttactaggcgaagcagttgagtgctgcaccccagatggtgatagtccag 88584 Query: 301 tagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatccc 360 |||||| ||| | |||||| | |||| |||| |||||||||||||||| |||||| Sbjct: 88583 tagccggaagtacagctagctcacgctccaacccaagtagcatggggcacgcaaaatccc 88524 Query: 361 gtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaag 420 |||||||||||| |||||||||||| ||||||||||| ||||| |||||||||||||||| Sbjct: 88523 gtgtgaatcagcgaggaccaccttgtaaggctaaatattcctgagtgaccgatagcgaag 88464 Query: 421 tagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaac 480 |||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| Sbjct: 88463 cagtaccgtgagggaaaggtgaaaagaacccccgtcggggagtgaaatagaacatgaaac 88404 Query: 481 cgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaag 540 || ||||||||||||||||||||| ||| | ||||||| |||||||||||||||||| Sbjct: 88403 cg---cgagctcccaagcagtgggaggagaatgagatctctaaccgcgtgcctgttgaag 88347 Query: 541 aatgagccggcgactcataggcagtggcttggttaaggg 579 ||||||||||||||| ||||| ||||| ||||||||| Sbjct: 88346 aatgagccggcgacttgtaggcggtggcccggttaaggg 88308
>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full insert sequence Length = 1634 Score = 482 bits (243), Expect = e-133 Identities = 246/247 (99%) Strand = Plus / Plus Query: 339 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 398 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 60 Query: 399 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 458 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 120 Query: 459 gtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 518 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gtagtgaaataggacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatc 180 Query: 519 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 578 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 240 Query: 579 gaacgga 585 ||||||| Sbjct: 241 gaacgga 247
>gb|M37149.1|SOYCPRTG Soybean chloroplast 16S rRNA (3' end), 18S rRNA (5' end), Ile-tRNA, and Ala-tRNA genes Length = 3022 Score = 482 bits (243), Expect = e-133 Identities = 349/377 (92%), Gaps = 7/377 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||| | Sbjct: 2650 aagggcgtagtaagcgacgaaatgcttcgggg-agttgaaaataagcgtagatccgg-gg 2707 Query: 61 attcccaa-ataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagaca 119 |||||| | |||||||||||||| |||||| ||||||||||| | |||||||||||||| Sbjct: 2708 attcccgatataggtcaacctttcgaactgc-tgctgaatccacgggcaggcaagagaca 2766 Query: 120 acctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 179 || ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2767 acttggtgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 2826 Query: 180 gtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaat 239 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 2827 gtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagctat 2886 Query: 240 acaagcgttgtgctgctaggcgaagcggttgag--tgccgcaccctagatggctaaagtc 297 ||||| || ||||||||||||||||| | ||| ||| |||||||||||||| | |||| Sbjct: 2887 acaagtgtcgtgctgctaggcgaagcagcagagaatgctgcaccctagatggcgagagtc 2946 Query: 298 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 357 |||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||| Sbjct: 2947 cagtagccgaaagcatcact-gcttacgctctgacccgagtagcatagggcacgtggaat 3005 Query: 358 cccgtgtgaatcagcaa 374 ||||||||||||||||| Sbjct: 3006 cccgtgtgaatcagcaa 3022
>gb|M21402.1|SOYRDNASPA Soybean chloroplast 16S/23S ribosomal intergenic spacer DNA Length = 1277 Score = 482 bits (243), Expect = e-133 Identities = 349/377 (92%), Gaps = 7/377 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||| | Sbjct: 905 aagggcgtagtaagcgacgaaatgcttcgggg-agttgaaaataagcgtagatccgg-gg 962 Query: 61 attcccaa-ataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagaca 119 |||||| | |||||||||||||| |||||| ||||||||||| | |||||||||||||| Sbjct: 963 attcccgatataggtcaacctttcgaactgc-tgctgaatccacgggcaggcaagagaca 1021 Query: 120 acctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 179 || ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1022 acttggtgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 1081 Query: 180 gtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaat 239 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1082 gtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagctat 1141 Query: 240 acaagcgttgtgctgctaggcgaagcggttgag--tgccgcaccctagatggctaaagtc 297 ||||| || ||||||||||||||||| | ||| ||| |||||||||||||| | |||| Sbjct: 1142 acaagtgtcgtgctgctaggcgaagcagcagagaatgctgcaccctagatggcgagagtc 1201 Query: 298 cagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaat 357 |||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||| Sbjct: 1202 cagtagccgaaagcatcact-gcttacgctctgacccgagtagcatagggcacgtggaat 1260 Query: 358 cccgtgtgaatcagcaa 374 ||||||||||||||||| Sbjct: 1261 cccgtgtgaatcagcaa 1277
>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full insert sequence Length = 1935 Score = 458 bits (231), Expect = e-125 Identities = 231/231 (100%) Strand = Plus / Plus Query: 355 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 414 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 aatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgata 60 Query: 415 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 474 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacg 120 Query: 475 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 534 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctg 180 Query: 535 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 585 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ttgaagaatgagccggcgactcataggcagtggcttggttaagggaacgga 231
>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome Length = 144170 Score = 450 bits (227), Expect = e-123 Identities = 417/478 (87%), Gaps = 8/478 (1%) Strand = Plus / Minus Query: 109 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 168 |||||||||| ||| ||||||| |||||||| | ||||| | |||| |||| ||||||| Sbjct: 139114 ggcaagagacgacccggcgaaccgaaacatccaaatagccgggggaagagaaggcaaaag 139055 Query: 169 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 228 ||||||||| |||||||||||||||| ||||| ||||||||||||| ||||||||||| Sbjct: 139054 cgattcccgcagtagcggcgagcgaagagggagtagcctaaaccgtgggaacggggttgt 138995 Query: 229 gggagagcaatac----aagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 284 |||||||| ||| ||| ||||||||| |||| |||||||| |||| ||||| || | Sbjct: 138994 gggagagcgataagtataag-gttgtgctgttaggtgaagcggtcgagtcccgcatccca 138936 Query: 285 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 344 || || || ||||| ||||||| ||||| ||| ||||| |||||||||||||||||||| Sbjct: 138935 gacggttagagtccggtagccggaagcagcacaggcttacgctctgacccgagtagcatg 138876 Query: 345 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 404 ||||||||||||||||||| |||||||| |||||||||| | ||||||||||||| |||| Sbjct: 138875 gggcacgtggaatcccgtgcgaatcagcgaggaccacctcgtaaggctaaatacttctgg 138816 Query: 405 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 464 ||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 138815 gtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaacccccatcggggagtg 138756 Query: 465 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 524 ||||||||| |||||||| | ||||||| |||||||||||| ||| |||||||||| Sbjct: 138755 aaatagaacatgaaaccg---taagctcccgagcagtgggaggagaattggatctctgac 138699 Query: 525 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac 582 ||||||||||||||||||||||||||||||| |||||| | ||| ||||||||||||| Sbjct: 138698 cgcgtgcctgttgaagaatgagccggcgacttataggcggcggcctggttaagggaac 138641 Score = 450 bits (227), Expect = e-123 Identities = 417/478 (87%), Gaps = 8/478 (1%) Strand = Plus / Plus Query: 109 ggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaag 168 |||||||||| ||| ||||||| |||||||| | ||||| | |||| |||| ||||||| Sbjct: 82763 ggcaagagacgacccggcgaaccgaaacatccaaatagccgggggaagagaaggcaaaag 82822 Query: 169 cgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgt 228 ||||||||| |||||||||||||||| ||||| ||||||||||||| ||||||||||| Sbjct: 82823 cgattcccgcagtagcggcgagcgaagagggagtagcctaaaccgtgggaacggggttgt 82882 Query: 229 gggagagcaatac----aagcgttgtgctgctaggcgaagcggttgagtgccgcacccta 284 |||||||| ||| ||| ||||||||| |||| |||||||| |||| ||||| || | Sbjct: 82883 gggagagcgataagtataag-gttgtgctgttaggtgaagcggtcgagtcccgcatccca 82941 Query: 285 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatg 344 || || || ||||| ||||||| ||||| ||| ||||| |||||||||||||||||||| Sbjct: 82942 gacggttagagtccggtagccggaagcagcacaggcttacgctctgacccgagtagcatg 83001 Query: 345 gggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgg 404 ||||||||||||||||||| |||||||| |||||||||| | ||||||||||||| |||| Sbjct: 83002 gggcacgtggaatcccgtgcgaatcagcgaggaccacctcgtaaggctaaatacttctgg 83061 Query: 405 gtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtg 464 ||||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 83062 gtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaacccccatcggggagtg 83121 Query: 465 aaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgac 524 ||||||||| |||||||| | ||||||| |||||||||||| ||| |||||||||| Sbjct: 83122 aaatagaacatgaaaccg---taagctcccgagcagtgggaggagaattggatctctgac 83178 Query: 525 cgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagggaac 582 ||||||||||||||||||||||||||||||| |||||| | ||| ||||||||||||| Sbjct: 83179 cgcgtgcctgttgaagaatgagccggcgacttataggcggcggcctggttaagggaac 83236
>dbj|AK104484.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-H11, full insert sequence Length = 1091 Score = 450 bits (227), Expect = e-123 Identities = 244/247 (98%), Gaps = 2/247 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 49 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 106 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 107 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 166 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 167 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 226 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 227 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 286 Query: 241 caagcgt 247 ||||||| Sbjct: 287 caagcgt 293
>dbj|AK060870.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H08, full insert sequence Length = 1091 Score = 450 bits (227), Expect = e-123 Identities = 244/247 (98%), Gaps = 2/247 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 49 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 106 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 107 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 166 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 167 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 226 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 227 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 286 Query: 241 caagcgt 247 ||||||| Sbjct: 287 caagcgt 293
>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and Ile) genes Length = 9493 Score = 448 bits (226), Expect = e-123 Identities = 330/364 (90%), Gaps = 3/364 (0%) Strand = Plus / Minus Query: 216 aaaacggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgc 275 ||||||||||||||||||||||||| |||||||||| |||||| ||||| ||||||| | Sbjct: 6284 aaaacggggttgtgggagagcaatataagcgttgtgtcgctaggtgaagcagttgagtcc 6225 Query: 276 cgcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccg 335 ||||||||||||| | |||||||||| ||||||| || | ||||| ||||| ||||| Sbjct: 6224 tgcaccctagatggtgagagtccagtagtcgaaagcggcattggcttacgctctaacccg 6165 Query: 336 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 395 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6164 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 6105 Query: 396 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 455 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 6104 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccctat 6045 Query: 456 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 515 ||| ||||||||||||| |||||||| | ||| ||||||||||||||| ||| | Sbjct: 6044 cggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggagaatgga 5988 Query: 516 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 575 |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| Sbjct: 5987 atctctgaccgcgtgccttttgaagaatgagccggcgacttataggcagtggcttggtta 5928 Query: 576 aggg 579 |||| Sbjct: 5927 aggg 5924 Score = 234 bits (118), Expect = 3e-58 Identities = 185/202 (91%), Gaps = 4/202 (1%) Strand = Plus / Minus Query: 13 agcgacgaaatgcttcggggnagttgaaaataagcatagatccggagnattcccaaatag 72 |||||||||||||||||||| ||||| || | |||||||||||||| |||||| ||||| Sbjct: 6512 agcgacgaaatgcttcgggg-agttgtaattc-gcatagatccggag-attcccgaatag 6456 Query: 73 gtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactg 132 || |||||||| |||||| ||||||||||||| ||||| ||| | |||||||| |||||| Sbjct: 6455 gttaaccttttgaactgc-tgctgaatccatgggcaggtaaggggcaacctggtgaactg 6397 Query: 133 aaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcg 192 ||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 6396 aaacatcttagtaaccagaggaagagaaagcaaaagcgattcccgtagtagcggcgagcg 6337 Query: 193 aaatgggagcagcctaaaccgt 214 |||||||||||||||||||||| Sbjct: 6336 aaatgggagcagcctaaaccgt 6315
>dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete genome Length = 430597 Score = 424 bits (214), Expect = e-115 Identities = 308/334 (92%), Gaps = 4/334 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| || |||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 177082 aagggcgtagtaatcgacgaaatgcttcgggg-agttgaaaatcagcatagatccggag- 177139 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| |||||| |||||||| |||||| ||||||||||||| |||||||||||| || Sbjct: 177140 attcccgaatagggcaacctttcgaactgc-tgctgaatccatgggcaggcaagagagaa 177198 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 || |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177199 ccaggcgaactgaaagatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 177258 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaata 240 |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 177259 tagcggcgggcgaaatgggagctgcctaaaccgtgaaaacggggttgtgggagagcaata 177318 Query: 241 caagcgttgtgctgctaggcgaagc-ggttgagtgccgcaccctagatggctaaagtcca 299 ||||||| |||| |||||||||||| | || ||| |||||||||||||| |||||||| Sbjct: 177319 caagcgtcgtgcagctaggcgaagcagcccgaatgctgcaccctagatggcgaaagtcca 177378 Query: 300 gtagccgaaagcatcactagcttatgctctgacc 333 |||||||||||||||||||||||| ||||||||| Sbjct: 177379 gtagccgaaagcatcactagcttaggctctgacc 177412 Score = 129 bits (65), Expect = 1e-26 Identities = 65/65 (100%) Strand = Plus / Plus Query: 518 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 577 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177405 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 177464 Query: 578 ggaac 582 ||||| Sbjct: 177465 ggaac 177469 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 406 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 418398 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 418443 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 406 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 67648 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 67693 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 125 gcgaactgaaacatcttagtagc 147 ||||||||||||||||||||||| Sbjct: 417776 gcgaactgaaacatcttagtagc 417798 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 125 gcgaactgaaacatcttagtagc 147 ||||||||||||||||||||||| Sbjct: 67026 gcgaactgaaacatcttagtagc 67048
>gb|DQ160136.1| Taraxacum officinale To110-2 mRNA, partial sequence Length = 282 Score = 416 bits (210), Expect = e-113 Identities = 264/280 (94%), Gaps = 4/280 (1%) Strand = Plus / Plus Query: 292 aaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacg 351 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3 aaagtccagtagccgaaagcatcactagcttacgctctgacccgagtagcatggggcacg 62 Query: 352 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 411 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63 tggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccg 122 Query: 412 atagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaataga 471 ||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| Sbjct: 123 atagcgaagtagtaccgtgagggaagggtgaaaagaacccccatcggggagtgaaataga 182 Query: 472 acgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgc 531 || |||||||| | |||||||||||||||||||||| | | |||||||||||||| Sbjct: 183 acatgaaaccg---taagctcccaagcagtgggaggggcccg-gggctctgaccgcgtgc 238 Query: 532 ctgttgaagaatgagccggcgactcataggcagtggcttg 571 |||||||||||||||||||||||||||||||||||||||| Sbjct: 239 ctgttgaagaatgagccggcgactcataggcagtggcttg 278
>gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Met, and atp9 genes, complete sequence; and atp6 pseudogene, partial sequence; mitochondrial Length = 10403 Score = 410 bits (207), Expect = e-111 Identities = 292/319 (91%), Gaps = 1/319 (0%) Strand = Plus / Minus Query: 71 aggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaac 130 |||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||| ||| Sbjct: 3695 aggtcaacctttcaaactgc-tgctgaatccatgggcaggcaagagacaacctggcaaac 3637 Query: 131 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 190 ||||| |||||||||||||||||||||||||||||||| ||||||||||||| || |||| Sbjct: 3636 tgaaatatcttagtagccagaggaaaagaaagcaaaagtgattcccgtagtaacgacgag 3577 Query: 191 cgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagcaatacaagcgttgt 250 ||||||||||||||||||||||| |||| | ||||||||||||||||| ||| ||| || Sbjct: 3576 tgaaatgggagcagcctaaaccgtaaaaatgaggttgtgggagagcaatgcaaacgtagt 3517 Query: 251 gctgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaag 310 || ||||||| ||||||| ||||| |||||||||||||| | ||| |||||||||||| Sbjct: 3516 gccgctaggcaaagcggtggagtgttgcaccctagatggcgagagtttagtagccgaaag 3457 Query: 311 catcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatca 370 |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| | Sbjct: 3456 catccctagcttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatta 3397 Query: 371 gcaaggaccaccttgcaag 389 ||||||||||||||||||| Sbjct: 3396 gcaaggaccaccttgcaag 3378 Score = 105 bits (53), Expect = 2e-19 Identities = 62/65 (95%) Strand = Plus / Minus Query: 518 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 577 |||||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 3249 ctctgaccgcgtacctattgaagaatgagccgacgactcataggcagtggcttggttaag 3190 Query: 578 ggaac 582 ||||| Sbjct: 3189 ggaac 3185 Score = 95.6 bits (48), Expect = 2e-16 Identities = 75/84 (89%) Strand = Plus / Minus Query: 398 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 457 ||||||| ||||| |||| |||||||||||||||||||| ||||||||||||||||| | Sbjct: 3365 ctcctggctgacctatagtgaagtagtaccgtgagggaagggtgaaaagaacccccatcg 3306 Query: 458 ggtagtgaaatagaacgtgaaacc 481 || |||||||||||| ||||||| Sbjct: 3305 gggagtgaaatagaagatgaaacc 3282
>gb|DQ460110.1| Nicotiana tabacum cDNA-AFLP fragment H-N_BC3M12-1 sequence Length = 249 Score = 404 bits (204), Expect = e-109 Identities = 238/248 (95%), Gaps = 1/248 (0%) Strand = Plus / Plus Query: 168 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttg 227 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 1 gcgattcccgtagtagcggcgagcgaaatgggagcagcctagaccgtgaaaacggggttg 60 Query: 228 tgggagagcaatacaagcgttgtgctgctaggcgaagcggtt-gagtgccgcaccctaga 286 |||||||||||||||||||| ||||||||||||||||| | || ||| |||||||||| Sbjct: 61 tgggagagcaatacaagcgtcgtgctgctaggcgaagcagcccgaatgctgcaccctaga 120 Query: 287 tggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 346 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggg 180 Query: 347 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggt 406 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 181 gcacgtggaatcccgtgtgaatcagcaaggaccaccttgctaggctaaatactcctgggt 240 Query: 407 gaccgata 414 |||||||| Sbjct: 241 gaccgata 248
>emb|AJ538583.1|NTA538583 Nicotiana tabacum cDNA-AFLP-fragment BC3-M31-041 Length = 226 Score = 355 bits (179), Expect = 1e-94 Identities = 200/207 (96%) Strand = Plus / Plus Query: 277 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 336 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10 gcaccctagatggcgaaagtccagtagccgaaagcatcactagcttatgctctgacccga 69 Query: 337 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 396 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 70 gtagcatggggcacgtggaatcccgtgtgaatcaacaaggaccaccttgcaaggctaaat 129 Query: 397 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 456 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 130 actcctgggtgaccgatagcgaagtagtaccgtgagggaagggtgaaaagaacccccatc 189 Query: 457 gggtagtgaaatagaacgtgaaaccgt 483 ||| ||||||||||||| ||||||||| Sbjct: 190 ggggagtgaaatagaacatgaaaccgt 216
>emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21 on chromosome 3, complete sequence Length = 121331 Score = 347 bits (175), Expect = 3e-92 Identities = 219/230 (95%), Gaps = 3/230 (1%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct: 79719 aagggcgtagtaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccg-agg 79662 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||||||||||||||| |||||| |||||||| || ||||||||||||||||| Sbjct: 79661 attcccgaataggtcaacctttcgaactgc-tgctgaattcacgagcaggcaagagacaa 79603 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79602 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 79543 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgg 230 |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 79542 tagcggcgagcgaaatgggaacagcctaaaccgtgaaaacggggttgtgg 79493
>gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2716 Score = 333 bits (168), Expect = 4e-88 Identities = 456/542 (84%), Gaps = 15/542 (2%) Strand = Plus / Plus Query: 39 aaaataagcatagatccggagnattcccaaataggtcaaccttttaaactgcctgctgaa 98 ||||||| ||||||||||||| |||||| ||||||| ||||||| |||||| |||| | Sbjct: 88 aaaataaacatagatccggag-attcccgaataggtaaaccttt--aactgc-tgcttat 143 Query: 99 tccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaag 158 |||||| |||| ||||||| ||||||| ||||||||||||||||||||||||||||||| Sbjct: 144 tccatg-gcagacaagaga-aacctggtgaactgaaacatcttagtagccagaggaaaat 201 Query: 159 aaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaa 218 |||||||||| |||||| |||||| ||| | |||| |||| ||||||||| || ||| Sbjct: 202 aaagcaaaagttattcccatagtagtggcaaatgaaaagggaacagcctaaatcgctaaa 261 Query: 219 acggggttgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgc 278 | ||||||| || ||||||| ||| || || |||||| || || || |||| | | Sbjct: 262 atggggttgggg---agcaataaaagtattttgttgctagacggagtagtggagttctga 318 Query: 279 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctga-cccgag 337 ||||||||||| | |||||||||| |||| |||| ||||||||||| | | |||||| Sbjct: 319 accctagatggtgagagtccagtagtataaagtatcattagcttatgcttttaacccgag 378 Query: 338 tagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaata 397 ||||||||| || |||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 379 tagcatgggacatatggaatcccgtgtgaatcagcaaggaccaccttgaaaggctaaata 438 Query: 398 ctcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtg 457 ||| ||||||||| |||| |||||||||||||||||||| ||||||||||||||||| || Sbjct: 439 ctcttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaacccccattg 498 Query: 458 ggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtgat 517 || |||||| |||||| ||||| | | ||| ||||||||||||||| || || | Sbjct: 499 gggagtgaactagaacatgaaaac---atatgctaccaagcagtgggaggagacaggg-- 553 Query: 518 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 577 |||||||| |||||| ||||||||||||| |||||||||||| | |||||| |||||||| Sbjct: 554 ctctgaccacgtgcccgttgaagaatgagtcggcgactcataagtagtggcctggttaag 613 Query: 578 gg 579 || Sbjct: 614 gg 615
>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome Length = 452528 Score = 327 bits (165), Expect = 2e-86 Identities = 182/185 (98%), Gaps = 2/185 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 75817 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 75874 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 75875 attcccaaataggtcaaccttttaaactgcctgcggaatccatgagcaggcaagagacaa 75934 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 75935 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 75994 Query: 181 tagcg 185 ||||| Sbjct: 75995 tagcg 75999 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 406 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 452 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 374093 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 374047 Score = 69.9 bits (35), Expect = 9e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 406 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccc 452 |||||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 262355 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaacccc 262309 Score = 40.1 bits (20), Expect = 8.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 ggcgaactgaaacatcttag 143 |||||||||||||||||||| Sbjct: 320856 ggcgaactgaaacatcttag 320837
>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2669 Score = 321 bits (162), Expect = 1e-84 Identities = 227/248 (91%), Gaps = 3/248 (1%) Strand = Plus / Plus Query: 331 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 390 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 378 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 437 Query: 391 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 450 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 438 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 497 Query: 451 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 510 |||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| || Sbjct: 498 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggaga 554 Query: 511 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 570 | | |||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 555 atggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcct 614 Query: 571 ggttaagg 578 |||||||| Sbjct: 615 ggttaagg 622 Score = 234 bits (118), Expect = 3e-58 Identities = 192/214 (89%), Gaps = 2/214 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| || ||| || |||||| ||||||||| Sbjct: 39 aagggcgtagcaagcgacgaaatgcttcgggg-agctgagaacaagcattgatccggag- 96 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 || ||| |||||| ||||| || |||||||||||||| || | ||||||||||||| Sbjct: 97 atgcccgaataggggaacctatttgactgcctgctgaattgatagggaggcaagagacaa 156 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 157 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctgag 216 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgt 214 ||| |||||||||||||||| ||||||||||||| Sbjct: 217 tagtggcgagcgaaatgggaacagcctaaaccgt 250
>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2825 Score = 321 bits (162), Expect = 1e-84 Identities = 227/248 (91%), Gaps = 3/248 (1%) Strand = Plus / Plus Query: 331 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 390 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| | |||| Sbjct: 391 acccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaagg 450 Query: 391 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 450 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 451 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 510 Query: 451 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 510 |||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| || Sbjct: 511 cccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggaga 567 Query: 511 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 570 | | |||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct: 568 atggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcct 627 Query: 571 ggttaagg 578 |||||||| Sbjct: 628 ggttaagg 635 Score = 234 bits (118), Expect = 3e-58 Identities = 192/214 (89%), Gaps = 2/214 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| || ||| || |||||| ||||||||| Sbjct: 52 aagggcgtagcaagcgacgaaatgcttcgggg-agctgagaacaagcattgatccggag- 109 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 || ||| |||||| ||||| || |||||||||||||| || | ||||||||||||| Sbjct: 110 atgcccgaataggggaacctatttgactgcctgctgaattgatagggaggcaagagacaa 169 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 170 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctgag 229 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgt 214 ||| |||||||||||||||| ||||||||||||| Sbjct: 230 tagtggcgagcgaaatgggaacagcctaaaccgt 263
>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome Length = 157089 Score = 319 bits (161), Expect = 6e-84 Identities = 226/247 (91%), Gaps = 3/247 (1%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 496 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 555 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 556 taaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 615 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 511 ||| ||| ||||||||||||| |||||||| | ||| ||||||||||||||| ||| Sbjct: 616 ccatcggggagtgaaatagaacatgaaaccg---taagcctccaagcagtgggaggagaa 672 Query: 512 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 571 | |||||||||||||||||||||||||||||||||||||||| |||||||||||| || Sbjct: 673 tggaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcctg 732 Query: 572 gttaagg 578 ||||||| Sbjct: 733 gttaagg 739 Score = 226 bits (114), Expect = 6e-56 Identities = 190/213 (89%), Gaps = 2/213 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 ||||||||||||||||||||||||||||||| || ||| || |||||| ||||||||| Sbjct: 156 aagggcgtagcaagcgacgaaatgcttcggg-aagctgagaacaagcattgatccggag- 213 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 || ||| |||||| ||||| || |||||||||||||| || | ||||||||||||| Sbjct: 214 atgcccgaataggggaacctatttgactgcctgctgaattgatagggaggcaagagacaa 273 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 274 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctgag 333 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccg 213 ||| |||||||||||||||| |||||||||||| Sbjct: 334 tagtggcgagcgaaatgggaacagcctaaaccg 366
>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2754 Score = 301 bits (152), Expect = 1e-78 Identities = 244/273 (89%), Gaps = 5/273 (1%) Strand = Plus / Plus Query: 307 aaagcatcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtga 366 |||| |||| ||||||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct: 373 aaagtatcattagcttatgctttgacccgagtagcatgggacacgtggaatcccgtgtga 432 Query: 367 atcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtac 426 |||||||||||||||||||||||||||||||||| ||||||||| |||| |||||||||| Sbjct: 433 atcagcaaggaccaccttgcaaggctaaatactcttgggtgaccaatagtgaagtagtac 492 Query: 427 cgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgct 486 | |||||||| ||||||||||||||| | |||| ||||||||||||| ||||| | | Sbjct: 493 catgagggaagggtgaaaagaacccctattggggagtgaaatagaacatgaaaac---at 549 Query: 487 gagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgag 546 |||| ||||||||||||||| | || | ||||||||||||||||||||||||||||| Sbjct: 550 aagctaccaagcagtgggaggagccaggg--ctctgaccgcgtgcctgttgaagaatgag 607 Query: 547 ccggcgactcataggcagtggcttggttaaggg 579 ||||||||||||| | |||||| |||||||||| Sbjct: 608 ccggcgactcataagtagtggcctggttaaggg 640 Score = 133 bits (67), Expect = 7e-28 Identities = 154/181 (85%), Gaps = 4/181 (2%) Strand = Plus / Plus Query: 106 gcaggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaa 165 |||| ||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct: 149 gcagacaagaga-aacctggtgaactgaaacatcttagtagccagaggaaaataaagcaa 207 Query: 166 aagcgattcccgtagtagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggt 225 ||| |||||| |||||| ||||||||||| |||| |||||||||||| |||| ||||| Sbjct: 208 aagttattcccatagtagtggcgagcgaaaagggaacagcctaaaccgctaaaatggggt 267 Query: 226 tgtgggagagcaatacaagcgttgtgctgctaggcgaagcggttgagtgccgcaccctag 285 | || |||||||| ||| ||||| |||||| |||||| || |||| | | ||||||| Sbjct: 268 t---ggggagcaataaaagtattgtgttgctagacgaagcagtggagttctgaaccctag 324 Query: 286 a 286 | Sbjct: 325 a 325
>dbj|AP004610.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1109A06 Length = 171438 Score = 301 bits (152), Expect = 1e-78 Identities = 158/160 (98%) Strand = Plus / Minus Query: 426 ccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgc 485 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 108050 ccgtgagggaaaggtgaaaagaacccccagtgggtaatgaaatagaacgtgaaaccgtgc 107991 Query: 486 tgagctcccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 545 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107990 tgagctcccaaccagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatga 107931 Query: 546 gccggcgactcataggcagtggcttggttaagggaacgga 585 |||||||||||||||||||||||||||||||||||||||| Sbjct: 107930 gccggcgactcataggcagtggcttggttaagggaacgga 107891
>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2875 Score = 299 bits (151), Expect = 5e-78 Identities = 285/329 (86%), Gaps = 3/329 (0%) Strand = Plus / Plus Query: 253 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 312 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 302 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 361 Query: 313 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 372 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 362 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 421 Query: 373 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 432 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 422 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 481 Query: 433 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 492 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 482 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 538 Query: 493 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 552 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 539 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 598 Query: 553 actcataggcagtggcttggttaagggaa 581 ||| |||||||||||| |||||||||||| Sbjct: 599 acttataggcagtggcgtggttaagggaa 627 Score = 222 bits (112), Expect = 1e-54 Identities = 207/236 (87%), Gaps = 2/236 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||| | ||||||||||||||||||||| || || || ||||||||||||| || Sbjct: 52 aagggcgtggtaagcgacgaaatgcttcgggg-agctgcgaacaagcatagatccgaag- 109 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 | ||| |||||| |||||| || ||| | |||||||||||| ||| | |||||| || Sbjct: 110 acccccgaatagggcaacctcttgtactacttgctgaatccataggcaagaaagagataa 169 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 170 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctgag 229 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 236 ||||||||||||||| |||| |||||||||||| |||| ||||||||||||||||| Sbjct: 230 tagcggcgagcgaaacgggatcagcctaaaccgcgaaagcggggttgtgggagagc 285
>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome Length = 131183 Score = 299 bits (151), Expect = 5e-78 Identities = 285/329 (86%), Gaps = 3/329 (0%) Strand = Plus / Minus Query: 253 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 312 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 124963 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 124904 Query: 313 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 372 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 124903 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 124844 Query: 373 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 432 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 124843 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 124784 Query: 433 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 492 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 124783 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 124727 Query: 493 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 552 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 124726 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 124667 Query: 553 actcataggcagtggcttggttaagggaa 581 ||| |||||||||||| |||||||||||| Sbjct: 124666 acttataggcagtggcgtggttaagggaa 124638 Score = 299 bits (151), Expect = 5e-78 Identities = 285/329 (86%), Gaps = 3/329 (0%) Strand = Plus / Plus Query: 253 tgctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagca 312 ||||||| ||||| |||||| | ||||| ||||||| | ||||||||| | |||||| Sbjct: 94903 tgctaggtgaagcagttgagaactgcaccgtagatggtgatagtccagtaatcaaaagca 94962 Query: 313 tcactagcttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagc 372 | ||| ||| ||||| |||||||||||||||| |||||| |||||||||||||||||| Sbjct: 94963 tatctaacttttgctccaacccgagtagcatgggacacgtgaaatcccgtgtgaatcagc 95022 Query: 373 aaggaccaccttgcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgag 432 |||||||||| | ||||||||||||||||||||||||||||| |||| ||||||| ||| Sbjct: 95023 gaggaccacctcgtaaggctaaatactcctgggtgaccgatagagaagaagtaccgcgag 95082 Query: 433 ggaaaggtgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctc 492 |||||||||||||||||||||| ||| ||||||||||||| ||||| || | |||| Sbjct: 95083 ggaaaggtgaaaagaacccccatcggggagtgaaatagaacatgaaatcg---taagctt 95139 Query: 493 ccaagcagtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcg 552 |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct: 95140 tcaagcagtgggaggagaattcaatctctgaccgcgtgcctgttgaagaatgagccggcg 95199 Query: 553 actcataggcagtggcttggttaagggaa 581 ||| |||||||||||| |||||||||||| Sbjct: 95200 acttataggcagtggcgtggttaagggaa 95228 Score = 222 bits (112), Expect = 1e-54 Identities = 207/236 (87%), Gaps = 2/236 (0%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||| | ||||||||||||||||||||| || || || ||||||||||||| || Sbjct: 125213 aagggcgtggtaagcgacgaaatgcttcgggg-agctgcgaacaagcatagatccgaag- 125156 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 | ||| |||||| |||||| || ||| | |||||||||||| ||| | |||||| || Sbjct: 125155 acccccgaatagggcaacctcttgtactacttgctgaatccataggcaagaaagagataa 125096 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 125095 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctgag 125036 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 236 ||||||||||||||| |||| |||||||||||| |||| ||||||||||||||||| Sbjct: 125035 tagcggcgagcgaaacgggatcagcctaaaccgcgaaagcggggttgtgggagagc 124980 Score = 222 bits (112), Expect = 1e-54 Identities = 207/236 (87%), Gaps = 2/236 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||| | ||||||||||||||||||||| || || || ||||||||||||| || Sbjct: 94653 aagggcgtggtaagcgacgaaatgcttcgggg-agctgcgaacaagcatagatccgaag- 94710 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 | ||| |||||| |||||| || ||| | |||||||||||| ||| | |||||| || Sbjct: 94711 acccccgaatagggcaacctcttgtactacttgctgaatccataggcaagaaagagataa 94770 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 94771 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattccctgag 94830 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggagagc 236 ||||||||||||||| |||| |||||||||||| |||| ||||||||||||||||| Sbjct: 94831 tagcggcgagcgaaacgggatcagcctaaaccgcgaaagcggggttgtgggagagc 94886
>gb|AC137922.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0046A04, complete sequence Length = 141001 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 285 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 343 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 95252 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 95311 Query: 344 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 403 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 95312 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 95371 Query: 404 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 463 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 95372 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 95431 Query: 464 gaaatagaacgtgaaaccgtgctgagctcc 493 |||||||||||||||||||||||||||||| Sbjct: 95432 gaaatagaacgtgaaaccgtgctgagctcc 95461
>gb|AC135558.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007C02, complete sequence Length = 148265 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Minus Query: 285 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 343 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 937 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 878 Query: 344 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 403 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 877 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 818 Query: 404 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 463 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 817 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 758 Query: 464 gaaatagaacgtgaaaccgtgctgagctcc 493 |||||||||||||||||||||||||||||| Sbjct: 757 gaaatagaacgtgaaaccgtgctgagctcc 728
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 285 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 343 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 11893525 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11893584 Query: 344 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 403 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11893585 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11893644 Query: 404 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 463 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 11893645 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 11893704 Query: 464 gaaatagaacgtgaaaccgtgctgagctcc 493 |||||||||||||||||||||||||||||| Sbjct: 11893705 gaaatagaacgtgaaaccgtgctgagctcc 11893734 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 486 tgagctcccaagcagtgggaggggaaagtgatc 518 |||||||||||| |||||||| ||||||||||| Sbjct: 9056543 tgagctcccaagtagtgggagaggaaagtgatc 9056575
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 289 bits (146), Expect = 5e-75 Identities = 195/210 (92%), Gaps = 1/210 (0%) Strand = Plus / Plus Query: 285 gatggctaaagtccagtagccgaaagcatcactagcttatgctctgaccc-gagtagcat 343 ||||| |||| |||||||||||||||||||||||||||| ||||| |||| ||||||||| Sbjct: 11971932 gatggataaaatccagtagccgaaagcatcactagcttacgctctaaccccgagtagcat 11971991 Query: 344 ggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctg 403 ||| ||||||||||| ||||||| || |||| |||||||||||||||||||||||||| Sbjct: 11971992 gggaaacgtggaatcctgtgtgaaccaacaagagccaccttgcaaggctaaatactcctg 11972051 Query: 404 ggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagt 463 ||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||| Sbjct: 11972052 ggtgaccgatagcgatgtagtacggtgagggaaaggtgaaaagaacccctagtgggtagt 11972111 Query: 464 gaaatagaacgtgaaaccgtgctgagctcc 493 |||||||||||||||||||||||||||||| Sbjct: 11972112 gaaatagaacgtgaaaccgtgctgagctcc 11972141 Score = 50.1 bits (25), Expect = 0.008 Identities = 31/33 (93%) Strand = Plus / Plus Query: 486 tgagctcccaagcagtgggaggggaaagtgatc 518 |||||||||||| |||||||| ||||||||||| Sbjct: 9128240 tgagctcccaagtagtgggagaggaaagtgatc 9128272
>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 287 bits (145), Expect = 2e-74 Identities = 222/247 (89%), Gaps = 3/247 (1%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 378 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 437 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 438 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 497 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 511 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 498 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 554 Query: 512 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 571 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| | Sbjct: 555 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctag 614 Query: 572 gttaagg 578 ||||||| Sbjct: 615 gttaagg 621 Score = 151 bits (76), Expect = 3e-33 Identities = 94/100 (94%) Strand = Plus / Plus Query: 113 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 172 ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 149 agagacaacctggtgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 208 Query: 173 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 212 |||| |||||||||||||||||| |||| ||| ||||||| Sbjct: 209 tcccttagtagcggcgagcgaaaggggaacagtctaaacc 248
>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome Length = 118360 Score = 287 bits (145), Expect = 2e-74 Identities = 222/247 (89%), Gaps = 3/247 (1%) Strand = Plus / Minus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 115284 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 115225 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 115224 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 115165 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 511 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 115164 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 115108 Query: 512 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 571 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| | Sbjct: 115107 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctag 115048 Query: 572 gttaagg 578 ||||||| Sbjct: 115047 gttaagg 115041 Score = 287 bits (145), Expect = 2e-74 Identities = 222/247 (89%), Gaps = 3/247 (1%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||| | Sbjct: 86704 cccgagtagcatggggcacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaagac 86763 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 86764 taaatactcctgggtgaccgatagcgaaatagtaccgtgagggaaaggtgaaaagaaccc 86823 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 511 ||| ||| ||||||||||||| ||||||||| |||| |||||||||||||| | Sbjct: 86824 ccatcggggagtgaaatagaacatgaaaccgta---agcttacaagcagtgggaggaggt 86880 Query: 512 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 571 |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| | Sbjct: 86881 tttgatctctgaccgcgtgcctattgaagaatgagccggcgacttataggcagtggctag 86940 Query: 572 gttaagg 578 ||||||| Sbjct: 86941 gttaagg 86947 Score = 151 bits (76), Expect = 3e-33 Identities = 94/100 (94%) Strand = Plus / Minus Query: 113 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 172 ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 115514 agagacaacctggtgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 115455 Query: 173 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 212 |||| |||||||||||||||||| |||| ||| ||||||| Sbjct: 115454 tcccttagtagcggcgagcgaaaggggaacagtctaaacc 115415 Score = 151 bits (76), Expect = 3e-33 Identities = 94/100 (94%) Strand = Plus / Plus Query: 113 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 172 ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 86474 agagacaacctggtgaattgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 86533 Query: 173 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 212 |||| |||||||||||||||||| |||| ||| ||||||| Sbjct: 86534 tcccttagtagcggcgagcgaaaggggaacagtctaaacc 86573
>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2674 Score = 287 bits (145), Expect = 2e-74 Identities = 222/247 (89%), Gaps = 3/247 (1%) Strand = Plus / Plus Query: 331 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 390 |||||||||||||||||||||||||||||||||||||||||| |||||||||| | |||| Sbjct: 337 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagg 396 Query: 391 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 450 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 397 ctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 456 Query: 451 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 510 ||| ||| ||||||||||||| |||||||| | ||| |||||||||||||| || Sbjct: 457 cccgtaggggagtgaaatagaacatgaaaccg---taagcctacaagcagtgggaggaga 513 Query: 511 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 570 | |||||||||||||||||||||||||||||||||||||||| ||| | |||||| | Sbjct: 514 atagaatctctgaccgcgtgcctgttgaagaatgagccggcgacttataagtagtggcct 573 Query: 571 ggttaag 577 ||||||| Sbjct: 574 ggttaag 580 Score = 159 bits (80), Expect = 1e-35 Identities = 95/100 (95%) Strand = Plus / Plus Query: 113 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 172 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 116 agagataacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 175 Query: 173 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 212 |||| ||||| |||||||||||||||| ||||||||||| Sbjct: 176 tccctcagtagtggcgagcgaaatgggaacagcctaaacc 215
>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 7651 Score = 276 bits (139), Expect = 8e-71 Identities = 264/305 (86%), Gaps = 3/305 (0%) Strand = Plus / Plus Query: 277 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 336 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 4370 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 4429 Query: 337 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 396 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 4430 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 4489 Query: 397 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 456 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 4490 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 4549 Query: 457 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 516 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 4550 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 4606 Query: 517 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 576 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4607 tctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 4666 Query: 577 gggaa 581 ||||| Sbjct: 4667 gggaa 4671 Score = 186 bits (94), Expect = 6e-44 Identities = 184/210 (87%), Gaps = 3/210 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| ||||||||||||||||||||| ||| ||||| | |||||||||||||| Sbjct: 4085 aagggcgtagtaagcgacgaaatgcttcgggg-agtcgaaaacaggcatagatccggag- 4142 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||| || |||| || |||||| ||||||||||| || | |||||| || Sbjct: 4143 attcccgaatggggtaaccccttgtactgcc-gctgaatccataggcggataagagagaa 4201 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| || Sbjct: 4202 cctggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcgattccctgag 4261 Query: 181 tagcggcgagcgaaatgggagcagcctaaa 210 ||||||||||||||||||||| |||||||| Sbjct: 4262 tagcggcgagcgaaatgggagaagcctaaa 4291
>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3257 Score = 276 bits (139), Expect = 8e-71 Identities = 264/305 (86%), Gaps = 3/305 (0%) Strand = Plus / Plus Query: 277 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 336 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396 Query: 337 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 396 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456 Query: 397 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 456 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 457 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 516 Query: 457 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 516 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 517 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 573 Query: 517 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 576 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 574 tctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 633 Query: 577 gggaa 581 ||||| Sbjct: 634 gggaa 638 Score = 178 bits (90), Expect = 1e-41 Identities = 183/210 (87%), Gaps = 3/210 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| ||||||||||||||||||||| ||| ||||| | |||||||||||||| Sbjct: 52 aagggcgtagtaagcgacgaaatgcttcgggg-agtcgaaaacaggcatagatccggag- 109 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||| || |||| || |||||| ||||||| ||| || | |||||| || Sbjct: 110 attcccgaatggggtaaccccttgtactgcc-gctgaatacataggcggataagagagaa 168 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| || Sbjct: 169 cctggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcgattccctgag 228 Query: 181 tagcggcgagcgaaatgggagcagcctaaa 210 ||||||||||||||||||||| |||||||| Sbjct: 229 tagcggcgagcgaaatgggagaagcctaaa 258
>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3277 Score = 276 bits (139), Expect = 8e-71 Identities = 264/305 (86%), Gaps = 3/305 (0%) Strand = Plus / Plus Query: 277 gcaccctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccga 336 |||||||||| || |||||||||||| |||||||| ||| ||||| ||||| |||| | Sbjct: 337 gcaccctagacggtgaaagtccagtagtcgaaagcaacacaagctttagctctaacccaa 396 Query: 337 gtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaat 396 |||||||||| |||| | ||||| |||||||| || |||||||||| | |||||||||| Sbjct: 397 gtagcatgggacacgggaaatcctgtgtgaatttgcgaggaccacctcgtaaggctaaat 456 Query: 397 actcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagt 456 |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 457 actcctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaaagaacccccata 516 Query: 457 gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtga 516 ||| ||||||| ||||| |||||||| | || |||||||||||||| ||| | Sbjct: 517 ggggagtgaaagagaacatgaaaccg---taggccttcaagcagtgggaggagaattgta 573 Query: 517 tctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 576 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 574 tctttgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaa 633 Query: 577 gggaa 581 ||||| Sbjct: 634 gggaa 638 Score = 186 bits (94), Expect = 6e-44 Identities = 184/210 (87%), Gaps = 3/210 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| ||||||||||||||||||||| ||| ||||| | |||||||||||||| Sbjct: 52 aagggcgtagtaagcgacgaaatgcttcgggg-agtcgaaaacaggcatagatccggag- 109 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| ||| || |||| || |||||| ||||||||||| || | |||||| || Sbjct: 110 attcccgaatggggtaaccccttgtactgcc-gctgaatccataggcggataagagagaa 168 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 ||||| ||||||||||||||||||||||||||||||| |||||||||||||||||| || Sbjct: 169 cctggtgaactgaaacatcttagtagccagaggaaaaaaaagcaaaagcgattccctgag 228 Query: 181 tagcggcgagcgaaatgggagcagcctaaa 210 ||||||||||||||||||||| |||||||| Sbjct: 229 tagcggcgagcgaaatgggagaagcctaaa 258
>gb|L49157.1|STXCPRGOL Stigeoclonium helveticum chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 6393 Score = 274 bits (138), Expect = 3e-70 Identities = 222/247 (89%), Gaps = 6/247 (2%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 410 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 469 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 470 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 529 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 511 || | ||| ||||||||||||| ||||||||| | ||| |||||||||||| |||| Sbjct: 530 ccggaggggagtgaaatagaacatgaaaccgtcc---gctgacaagcagtggga--ggaa 584 Query: 512 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 571 | ||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 585 atagat-tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttg 643 Query: 572 gttaagg 578 ||||||| Sbjct: 644 gttaagg 650 Score = 95.6 bits (48), Expect = 2e-16 Identities = 87/100 (87%) Strand = Plus / Plus Query: 112 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 171 ||||| ||||| || ||| ||||||||||||||| || ||||||||||||||||| |||| Sbjct: 148 aagaggcaacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaacgcga 207 Query: 172 ttcccgtagtagcggcgagcgaaatgggagcagcctaaac 211 || || ||||||||||||||||| || | |||||||||| Sbjct: 208 tttcctgagtagcggcgagcgaaacggaatcagcctaaac 247
>gb|L42993.1|URMCPRGOL Uronema belkae large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2619 Score = 274 bits (138), Expect = 3e-70 Identities = 222/247 (89%), Gaps = 6/247 (2%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||| ||||||||||||||| |||||||| |||||||||| ||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggagaaaagaaccc 490 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 511 || | ||| |||||||||||||| |||||||| | ||| |||||||||||| |||| Sbjct: 491 ccggaggggagtgaaatagaacgcgaaaccgtcc---gctgacaagcagtggga--ggaa 545 Query: 512 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 571 ||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct: 546 gaagat-tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcttg 604 Query: 572 gttaagg 578 ||||||| Sbjct: 605 gttaagg 611 Score = 109 bits (55), Expect = 1e-20 Identities = 76/83 (91%) Strand = Plus / Plus Query: 112 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 171 ||||||||||| || ||| ||||||||||||||| || |||||||||||||||||||||| Sbjct: 140 aagagacaacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaaagcga 199 Query: 172 ttcccgtagtagcggcgagcgaa 194 || || ||||||||||||||||| Sbjct: 200 tttccttagtagcggcgagcgaa 222
>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast gene for chloroplast product Length = 2691 Score = 260 bits (131), Expect = 5e-66 Identities = 223/253 (88%), Gaps = 3/253 (1%) Strand = Plus / Plus Query: 326 ctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttg 385 |||| |||||||||||||| |||||||| || | |||||||||||| |||||||||| | Sbjct: 338 ctctaacccgagtagcatgaggcacgtgaaaccttgtgtgaatcagcgaggaccacctcg 397 Query: 386 caaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa 445 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 398 taaggctaaatactcctgggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaa 457 Query: 446 gaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggga 505 ||||||||| |||| ||||||||||| |||||||| | ||| |||||||||||| Sbjct: 458 gaacccccactggggagtgaaatagataatgaaaccg---taagcctacaagcagtggga 514 Query: 506 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagt 565 || || | || ||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 515 ggaaaatataatttctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagt 574 Query: 566 ggcttggttaagg 578 ||| ||||||||| Sbjct: 575 ggcctggttaagg 587 Score = 139 bits (70), Expect = 1e-29 Identities = 88/94 (93%) Strand = Plus / Plus Query: 119 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgt 178 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct: 125 aacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgatttcctt 184 Query: 179 agtagcggcgagcgaaatgggagcagcctaaacc 212 ||||| ||||||||||| || | ||||||||||| Sbjct: 185 agtagtggcgagcgaaacggaatcagcctaaacc 218 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcgg 30 |||||||||| ||||||||||| ||||||| Sbjct: 13 aagggcgtagtaagcgacgaaacgcttcgg 42
>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 3349 Score = 252 bits (127), Expect = 1e-63 Identities = 225/257 (87%), Gaps = 3/257 (1%) Strand = Plus / Plus Query: 325 gctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccacctt 384 ||||| |||| ||||||||||| |||||| ||||||||||||||| || |||||||||| Sbjct: 380 gctctaacccaagtagcatgggacacgtgaaatcccgtgtgaatctgcgaggaccacctc 439 Query: 385 gcaaggctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa 444 ||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 440 gcaaggctaaatacttctgggtaaccgatagcgaaaaagtaccgtgagggaaaggtgaaa 499 Query: 445 agaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtggg 504 |||||||||| ||| ||||||| ||||| |||||||| | ||| ||||||||||| Sbjct: 500 agaacccccataggggagtgaaaaagaacatgaaaccg---taggctttcaagcagtggg 556 Query: 505 aggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcag 564 || ||| | |||| |||||||||||||||||||||||||||||||||||||||| || Sbjct: 557 agaagaattttatctttgaccgcgtgcctgttgaagaatgagccggcgactcatagatag 616 Query: 565 tggcttggttaagggaa 581 ||||| ||||||||||| Sbjct: 617 tggctgggttaagggaa 633 Score = 157 bits (79), Expect = 5e-35 Identities = 182/211 (86%), Gaps = 4/211 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| ||||||||||| ||||||||| ||| ||||| | | ||||||||||| Sbjct: 52 aagggcgtagtaagcgacgaaacgcttcgggg-agtcgaaaacagacgtagatccggag- 109 Query: 61 attcccaaataggtcaacct-tttaaactgcctgctgaatccatgagcaggcaagagaca 119 |||||| ||| || |||| ||| |||||| ||||||| ||| ||| | |||||||| Sbjct: 110 attcccgaatggggtaacccctttgtactgcc-gctgaattcataagcggataagagaca 168 Query: 120 acctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgta 179 |||||| ||||||||||||||||||| ||||||||||||||||||||||||||| || | Sbjct: 169 acctggtgaactgaaacatcttagtaaccagaggaaaagaaagcaaaagcgatttcctga 228 Query: 180 gtagcggcgagcgaaatgggagcagcctaaa 210 |||||||||||||||||||||| |||||||| Sbjct: 229 gtagcggcgagcgaaatgggagaagcctaaa 259
>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene, partial sequence; chloroplast gene for chloroplast product Length = 2571 Score = 242 bits (122), Expect = 1e-60 Identities = 217/247 (87%), Gaps = 5/247 (2%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 376 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 435 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 || |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 436 tacatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 495 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 511 || ||| ||||||| ||| | |||||||| || ||| |||||||||||||||| Sbjct: 496 ccgcaggggagtgaaaaagatcatgaaaccg---tgtgcttacaagcagtgggagggg-- 550 Query: 512 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttg 571 ||| | |||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 551 cctgagccctgaccgcgtgcctgttgaagaatgagccggcgacttttagcaagtggcttg 610 Query: 572 gttaagg 578 ||||||| Sbjct: 611 gttaagg 617 Score = 135 bits (68), Expect = 2e-28 Identities = 110/124 (88%) Strand = Plus / Plus Query: 90 cctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacatcttagtagcca 149 |||||||||| ||| ||||| |||| |||| || |||||||||||||||||||||| Sbjct: 126 cctgctgaattcataggcagggtagaggaaacccggtgaactgaaacatcttagtagccg 185 Query: 150 gaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgggagcagcctaa 209 ||||||||||||||||| ||||||||| |||||||||||||||||| |||| |||||||| Sbjct: 186 gaggaaaagaaagcaaacgcgattcccttagtagcggcgagcgaaacgggaccagcctaa 245 Query: 210 accg 213 |||| Sbjct: 246 accg 249
>gb|DQ160045.1| Taraxacum officinale To45-1 mRNA, partial sequence Length = 329 Score = 240 bits (121), Expect = 4e-60 Identities = 145/153 (94%) Strand = Plus / Minus Query: 260 cgaagcggttgagtgccgcaccctagatggctaaagtccagtagccgaaagcatcactag 319 |||||| || || ||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 329 cgaagcagtagaatgctgcaccctagatggcgaaagtccagtagccgaaagcatcactag 270 Query: 320 cttatgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 379 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 cttacgctctgacccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggacc 210 Query: 380 accttgcaaggctaaatactcctgggtgaccga 412 |||||||||||||||||||||||| | |||||| Sbjct: 209 accttgcaaggctaaatactcctgcgggaccga 177
>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2665 Score = 240 bits (121), Expect = 4e-60 Identities = 209/237 (88%), Gaps = 6/237 (2%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 398 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 457 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 458 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 517 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 511 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 518 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 574 Query: 512 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 568 | | | |||||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 575 a---agccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcactggc 628 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 113 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 172 |||| |||||| | ||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 149 agaggcaacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgat 208 Query: 173 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 213 |||| |||||||||||||| || |||| |||||||||||| Sbjct: 209 tccctgagtagcggcgagcggaaagggaacagcctaaaccg 249
>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; and large subunit ribosomal RNA (rrl) gene, partial sequence; chloroplast genes for chloroplast products Length = 4577 Score = 240 bits (121), Expect = 4e-60 Identities = 209/237 (88%), Gaps = 6/237 (2%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 2167 cccgagtagcatggggcacgtgaaatcccgtgtgaatctacgaggaccacctcgtaaggc 2226 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 2227 taaatactcctgggtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 2286 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 511 ||| ||| ||||||| ||||| ||||||||| |||| |||||||||||||||| | Sbjct: 2287 ccatcggggagtgaaaaagaacatgaaaccgta---agcttacaagcagtgggaggggta 2343 Query: 512 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 568 | | | |||||||||||||||||||||||||||||||||||| ||||||| |||| Sbjct: 2344 a---agccctgaccgcgtgcctgttgaagaatgagccggcgacttataggcactggc 2397 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 113 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 172 |||| |||||| | ||||||||||||||||||||| || ||||||||||||||||||||| Sbjct: 1915 agaggcaacctagtgaactgaaacatcttagtagctagtggaaaagaaagcaaaagcgat 1974 Query: 173 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 213 |||| |||||||||||||| || |||| |||||||||||| Sbjct: 1975 tccctgagtagcggcgagcggaaagggaacagcctaaaccg 2015
>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2622 Score = 238 bits (120), Expect = 2e-59 Identities = 219/249 (87%), Gaps = 6/249 (2%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 355 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 414 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaa-gaacc 450 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 415 taaatactcctgggtaaccgatagtgaagtagtaccgtgagggaaaggtgaaaaagaacc 474 Query: 451 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 510 || | ||| ||||||| ||||| ||||||| || |||| |||||||||||| ||| Sbjct: 475 cctggaggggagtgaaaaagaacatgaaacc---ctaagctgacaagcagtggga--gga 529 Query: 511 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 570 | | |||||||||||||||||||||||||||||||||||||| || | |||||||| Sbjct: 530 cttttaagtctgaccgcgtgcctgttgaagaatgagccggcgactcctaagaagtggctt 589 Query: 571 ggttaaggg 579 ||||||||| Sbjct: 590 ggttaaggg 598 Score = 123 bits (62), Expect = 7e-25 Identities = 86/94 (91%) Strand = Plus / Plus Query: 118 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 177 ||||| || ||| |||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 64 caacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcgattcccc 123 Query: 178 tagtagcggcgagcgaaatgggagcagcctaaac 211 |||||||||||||||||| |||| |||||||||| Sbjct: 124 tagtagcggcgagcgaaaagggaacagcctaaac 157
>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome Length = 165372 Score = 236 bits (119), Expect = 7e-59 Identities = 217/249 (87%), Gaps = 3/249 (1%) Strand = Plus / Plus Query: 331 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 390 |||||||||||||| |||||||| || | ||||||||||||| |||||||||| | |||| Sbjct: 784 acccgagtagcatgaggcacgtgaaacctcgtgtgaatcagcgaggaccacctcgtaagg 843 Query: 391 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 450 |||||||||||| ||||| |||||| |||| ||||||||||||||||||||||||||||| Sbjct: 844 ctaaatactcctaggtgatcgatagtgaagaagtaccgtgagggaaaggtgaaaagaacc 903 Query: 451 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 510 |||| ||| ||||||||||| |||||||| | |||| ||||||||||||| || Sbjct: 904 cccataggggagtgaaatagactatgaaaccg---taagcttacaagcagtgggagaaga 960 Query: 511 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 570 | | |||| ||||||||||||||||||||||||||||||||||| ||| |||||||| | Sbjct: 961 atctaatctttgaccgcgtgcctgttgaagaatgagccggcgacttataagcagtggcct 1020 Query: 571 ggttaaggg 579 ||||||||| Sbjct: 1021 ggttaaggg 1029 Score = 155 bits (78), Expect = 2e-34 Identities = 136/154 (88%), Gaps = 1/154 (0%) Strand = Plus / Plus Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| |||||| |||||| | ||||||| |||||||| ||| || | ||||||||| Sbjct: 511 attcccgaatagggcaacctgt-aaactgcttgctgaattcataggcgagtaagagacaa 569 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 ||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||| ||| Sbjct: 570 cctggtgaactgaaacatcttagtaaccagaggaacagaaagcaaaagcgattcccttag 629 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgt 214 ||| ||||||||||| |||| ||||||||||||| Sbjct: 630 tagtggcgagcgaaacgggaacagcctaaaccgt 663 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcgg 30 |||||||||| ||||||||||||||||||| Sbjct: 455 aagggcgtagaaagcgacgaaatgcttcgg 484
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 234 bits (118), Expect = 3e-58 Identities = 135/138 (97%), Gaps = 2/138 (1%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 19434055 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 19433998 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 19433997 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 19433938 Query: 121 cctggcgaactgaaacat 138 |||||||||||||||||| Sbjct: 19433937 cctggcgaactgaaacat 19433920 Score = 83.8 bits (42), Expect = 6e-13 Identities = 42/42 (100%) Strand = Plus / Minus Query: 506 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 547 |||||||||||||||||||||||||||||||||||||||||| Sbjct: 12182494 ggggaaagtgatctctgaccgcgtgcctgttgaagaatgagc 12182453 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 424 taccgtgagggaaaggtgaaaagaacc 450 |||||||||||||||||||||| |||| Sbjct: 14553517 taccgtgagggaaaggtgaaaataacc 14553543
>dbj|AP004790.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0476H10 Length = 151703 Score = 234 bits (118), Expect = 3e-58 Identities = 135/138 (97%), Gaps = 2/138 (1%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 51582 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 51525 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 51524 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 51465 Query: 121 cctggcgaactgaaacat 138 |||||||||||||||||| Sbjct: 51464 cctggcgaactgaaacat 51447
>dbj|AP004879.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0475F05 Length = 147522 Score = 234 bits (118), Expect = 3e-58 Identities = 135/138 (97%), Gaps = 2/138 (1%) Strand = Plus / Minus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 119546 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 119489 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 119488 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 119429 Query: 121 cctggcgaactgaaacat 138 |||||||||||||||||| Sbjct: 119428 cctggcgaactgaaacat 119411
>emb|AJ535053.1|OSA535053 Oryza sativa (japonica cultivar-group) pdr2 gene for PDR-like ABC transporter, exons 1-22 Length = 15112 Score = 234 bits (118), Expect = 3e-58 Identities = 135/138 (97%), Gaps = 2/138 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 6076 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 6133 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 6134 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 6193 Query: 121 cctggcgaactgaaacat 138 |||||||||||||||||| Sbjct: 6194 cctggcgaactgaaacat 6211
>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2737 Score = 232 bits (117), Expect = 1e-57 Identities = 180/201 (89%) Strand = Plus / Plus Query: 279 accctagatggctaaagtccagtagccgaaagcatcactagcttatgctctgacccgagt 338 ||||||||||| | |||||||||| |||| |||| ||||||||||| |||| ||||| Sbjct: 332 accctagatggtgagagtccagtagtataaagtatcattagcttatgctttgactcgagt 391 Query: 339 agcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatac 398 |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 392 agcatgggacacgtggaatcccgtgtgaatcagcaaggatcaccttgcaaggctaaatac 451 Query: 399 tcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgg 458 || ||||||||| |||| |||||||||||||||||||| ||||||||||||| | | ||| Sbjct: 452 tcttgggtgaccaatagtgaagtagtaccgtgagggaagggtgaaaagaacctctactgg 511 Query: 459 gtagtgaaatagaacgtgaaa 479 | ||||||||||||| ||||| Sbjct: 512 ggagtgaaatagaacatgaaa 532 Score = 145 bits (73), Expect = 2e-31 Identities = 180/209 (86%), Gaps = 5/209 (2%) Strand = Plus / Plus Query: 19 gaaatgcttcggggnagttgaaaataagcatagatccggagnattcccaaataggtcaac 78 |||||||||||||| |||| ||||||| ||||||||||||| |||||| ||||||| ||| Sbjct: 68 gaaatgcttcgggg-agttaaaaataaacatagatccggag-attcccgaataggtaaac 125 Query: 79 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 138 |||| ||||||| |||| | |||||| |||| ||| ||| ||||||| |||||||| ||| Sbjct: 126 ctttaaaactgc-tgcttattccatg-gcagacaaaaga-aacctggtgaactgaatcat 182 Query: 139 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 198 |||||||| |||||||||| |||||||||| ||| || |||||| |||||| |||| || Sbjct: 183 cttagtagacagaggaaaataaagcaaaagttattaccatagtagtggcgagtgaaaagg 242 Query: 199 gagcagcctaaaccgtgaaaacggggttg 227 || |||||||||||| |||| ||||||| Sbjct: 243 gaacagcctaaaccgctaaaatggggttg 271 Score = 91.7 bits (46), Expect = 2e-15 Identities = 58/62 (93%) Strand = Plus / Plus Query: 518 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 577 ||||||| |||| ||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct: 566 ctctgactgcgttcctgttgaagaatgagccggcgactcataagtagtggcttggttaag 625 Query: 578 gg 579 || Sbjct: 626 gg 627
>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2888 Score = 230 bits (116), Expect = 4e-57 Identities = 214/246 (86%), Gaps = 3/246 (1%) Strand = Plus / Plus Query: 336 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 395 ||||| ||||| |||||| |||||| | |||||| |||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatctacaaggaccaccttgtaaggctaaa 444 Query: 396 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 455 |||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgcgagggaaaggtgaaaagaacccccat 504 Query: 456 tgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagtg 515 ||| ||||||||||||| ||||||| | |||| |||||||||||||| | | Sbjct: 505 aggggagtgaaatagaacatgaaacc---ataagctttcaagcagtgggaggaggattga 561 Query: 516 atctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggtta 575 | || ||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct: 562 acctttgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggtta 621 Query: 576 agggaa 581 |||||| Sbjct: 622 agggaa 627 Score = 159 bits (80), Expect = 1e-35 Identities = 196/232 (84%), Gaps = 2/232 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| |||||||||||||||||||| || || || ||||||| ||||| || Sbjct: 52 aagggcgtagtcagcgacgaaatgcttcgggg-agctgcgaacaagcataaatccgaag- 109 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| |||||| ||||| || ||| |||| |||| || | |||| ||||| || Sbjct: 110 attcccgaatagggtaacctcttgtactacctgtagaattaataatcaggttagagaaaa 169 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 ||| | ||||||||||||||||||||| |||||||||||||||||||||||||||| || Sbjct: 170 cctagtgaactgaaacatcttagtagctagaggaaaagaaagcaaaagcgattccctcag 229 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggga 232 ||| ||||||||||| |||| |||||||||||| |||| ||||||||||||| Sbjct: 230 tagtggcgagcgaaacgggaacagcctaaaccgcgaaagcggggttgtggga 281
>dbj|AK059621.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-H01, full insert sequence Length = 1729 Score = 230 bits (116), Expect = 4e-57 Identities = 133/136 (97%), Gaps = 2/136 (1%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1596 aagggcgtagcaagcgacgaaatgcttcgggg-agttgaaaataagcatagatccggag- 1653 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1654 attcccaaataggtcaaccttttgaactgcctgctgaatccatgagcaggcaagagacaa 1713 Query: 121 cctggcgaactgaaac 136 |||||||||||||||| Sbjct: 1714 cctggcgaactgaaac 1729
>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 294 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 353 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 354 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 413 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 414 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 473 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 474 gtgaaa 479 ||||| Sbjct: 504 atgaaa 509 Score = 119 bits (60), Expect = 1e-23 Identities = 162/191 (84%), Gaps = 4/191 (2%) Strand = Plus / Plus Query: 19 gaaatgcttcggggnagttgaaaataagcatagatccggagnattcccaaataggtcaac 78 |||||||||||||| | ||||||| ||||||||||||| |||||| ||||||| ||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggag-attcccgaataggtaaac 126 Query: 79 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 138 |||| ||||||| |||| | |||||| | || ||||||| |||| || |||||||||||| Sbjct: 127 ctttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacat 183 Query: 139 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 198 ||||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| || Sbjct: 184 cttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaagg 243 Query: 199 gagcagcctaa 209 || || ||||| Sbjct: 244 gaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 518 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 577 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 578 gg 579 || Sbjct: 602 gg 603
>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 294 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 353 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 354 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 413 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 414 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 473 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 474 gtgaaa 479 ||||| Sbjct: 503 atgaaa 508 Score = 119 bits (60), Expect = 1e-23 Identities = 162/191 (84%), Gaps = 4/191 (2%) Strand = Plus / Plus Query: 19 gaaatgcttcggggnagttgaaaataagcatagatccggagnattcccaaataggtcaac 78 |||||||||||||| | ||||||| ||||||||||||| |||||| ||||||| ||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggag-attcccgaataggtaaac 126 Query: 79 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 138 |||| ||||||| |||| | |||||| | || ||||||| |||| || |||||||||||| Sbjct: 127 ctttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacat 183 Query: 139 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 198 ||||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| || Sbjct: 184 cttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaagg 243 Query: 199 gagcagcctaa 209 || || ||||| Sbjct: 244 gaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 518 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 577 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 600 Query: 578 gg 579 || Sbjct: 601 gg 602
>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 294 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 353 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 354 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 413 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 414 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 473 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 474 gtgaaa 479 ||||| Sbjct: 504 atgaaa 509 Score = 119 bits (60), Expect = 1e-23 Identities = 162/191 (84%), Gaps = 4/191 (2%) Strand = Plus / Plus Query: 19 gaaatgcttcggggnagttgaaaataagcatagatccggagnattcccaaataggtcaac 78 |||||||||||||| | ||||||| ||||||||||||| |||||| ||||||| ||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggag-attcccgaataggtaaac 126 Query: 79 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 138 |||| ||||||| |||| | |||||| | || ||||||| |||| || |||||||||||| Sbjct: 127 ctttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacat 183 Query: 139 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 198 ||||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| || Sbjct: 184 cttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaagg 243 Query: 199 gagcagcctaa 209 || || ||||| Sbjct: 244 gaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 518 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 577 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 578 gg 579 || Sbjct: 602 gg 603
>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 294 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 353 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 354 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 413 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 414 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 473 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 474 gtgaaa 479 ||||| Sbjct: 504 atgaaa 509 Score = 119 bits (60), Expect = 1e-23 Identities = 162/191 (84%), Gaps = 4/191 (2%) Strand = Plus / Plus Query: 19 gaaatgcttcggggnagttgaaaataagcatagatccggagnattcccaaataggtcaac 78 |||||||||||||| | ||||||| ||||||||||||| |||||| ||||||| ||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggag-attcccgaataggtaaac 126 Query: 79 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 138 |||| ||||||| |||| | |||||| | || ||||||| |||| || |||||||||||| Sbjct: 127 ctttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacat 183 Query: 139 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 198 ||||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| || Sbjct: 184 cttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaagg 243 Query: 199 gagcagcctaa 209 || || ||||| Sbjct: 244 gaacaacctaa 254 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 518 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 577 |||||||| ||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccacgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 578 gg 579 || Sbjct: 602 gg 603
>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 294 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 353 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 354 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 413 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 414 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 473 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 474 gtgaaa 479 ||||| Sbjct: 504 atgaaa 509 Score = 119 bits (60), Expect = 1e-23 Identities = 162/191 (84%), Gaps = 4/191 (2%) Strand = Plus / Plus Query: 19 gaaatgcttcggggnagttgaaaataagcatagatccggagnattcccaaataggtcaac 78 |||||||||||||| | ||||||| ||||||||||||| |||||| ||||||| ||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggag-attcccgaataggtaaac 126 Query: 79 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 138 |||| ||||||| |||| | |||||| | || ||||||| |||| || |||||||||||| Sbjct: 127 ctttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacat 183 Query: 139 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 198 ||||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| || Sbjct: 184 cttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaagg 243 Query: 199 gagcagcctaa 209 || || ||||| Sbjct: 244 gaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 518 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 577 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 578 gg 579 || Sbjct: 602 gg 603
>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 294 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 353 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 354 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 413 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 414 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 473 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 474 gtgaaa 479 ||||| Sbjct: 504 atgaaa 509 Score = 119 bits (60), Expect = 1e-23 Identities = 156/183 (85%), Gaps = 4/183 (2%) Strand = Plus / Plus Query: 19 gaaatgcttcggggnagttgaaaataagcatagatccggagnattcccaaataggtcaac 78 |||||||||||||| | ||||||| ||||||||||||| |||||| ||||||| ||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggag-attcccgaataggtaaac 126 Query: 79 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 138 |||| ||||||| |||| | |||||| | || ||||||| |||| || |||||||||||| Sbjct: 127 ctttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacat 183 Query: 139 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 198 ||||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| || Sbjct: 184 cttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaagg 243 Query: 199 gag 201 ||| Sbjct: 244 gag 246 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 518 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 577 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 578 gg 579 || Sbjct: 602 gg 603
>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2696 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 294 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 353 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 323 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 382 Query: 354 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 413 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 383 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 442 Query: 414 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 473 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 443 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 502 Query: 474 gtgaaa 479 ||||| Sbjct: 503 atgaaa 508 Score = 119 bits (60), Expect = 1e-23 Identities = 162/191 (84%), Gaps = 4/191 (2%) Strand = Plus / Plus Query: 19 gaaatgcttcggggnagttgaaaataagcatagatccggagnattcccaaataggtcaac 78 |||||||||||||| | ||||||| ||||||||||||| |||||| ||||||| ||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggag-attcccgaataggtaaac 126 Query: 79 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 138 |||| ||||||| |||| | |||||| | || ||||||| |||| || |||||||||||| Sbjct: 127 ctttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacat 183 Query: 139 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 198 ||||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| || Sbjct: 184 cttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaagg 243 Query: 199 gagcagcctaa 209 || || ||||| Sbjct: 244 gaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 518 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 577 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 541 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 600 Query: 578 gg 579 || Sbjct: 601 gg 602
>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 294 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 353 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 354 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 413 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 414 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 473 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 474 gtgaaa 479 ||||| Sbjct: 504 atgaaa 509 Score = 119 bits (60), Expect = 1e-23 Identities = 162/191 (84%), Gaps = 4/191 (2%) Strand = Plus / Plus Query: 19 gaaatgcttcggggnagttgaaaataagcatagatccggagnattcccaaataggtcaac 78 |||||||||||||| | ||||||| ||||||||||||| |||||| ||||||| ||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggag-attcccgaataggtaaac 126 Query: 79 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 138 |||| ||||||| |||| | |||||| | || ||||||| |||| || |||||||||||| Sbjct: 127 ctttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacat 183 Query: 139 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 198 ||||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| || Sbjct: 184 cttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaagg 243 Query: 199 gagcagcctaa 209 || || ||||| Sbjct: 244 gaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 518 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 577 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 578 gg 579 || Sbjct: 602 gg 603
>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 294 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 353 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 354 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 413 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 414 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 473 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 474 gtgaaa 479 ||||| Sbjct: 504 atgaaa 509 Score = 119 bits (60), Expect = 1e-23 Identities = 162/191 (84%), Gaps = 4/191 (2%) Strand = Plus / Plus Query: 19 gaaatgcttcggggnagttgaaaataagcatagatccggagnattcccaaataggtcaac 78 |||||||||||||| | ||||||| ||||||||||||| |||||| ||||||| ||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggag-attcccgaataggtaaac 126 Query: 79 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 138 |||| ||||||| |||| | |||||| | || ||||||| |||| || |||||||||||| Sbjct: 127 ctttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacat 183 Query: 139 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 198 ||||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| || Sbjct: 184 cttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaagg 243 Query: 199 gagcagcctaa 209 || || ||||| Sbjct: 244 gaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 518 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 577 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 578 gg 579 || Sbjct: 602 gg 603
>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 294 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 353 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 354 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 413 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 414 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 473 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 474 gtgaaa 479 ||||| Sbjct: 504 atgaaa 509 Score = 119 bits (60), Expect = 1e-23 Identities = 162/191 (84%), Gaps = 4/191 (2%) Strand = Plus / Plus Query: 19 gaaatgcttcggggnagttgaaaataagcatagatccggagnattcccaaataggtcaac 78 |||||||||||||| | ||||||| ||||||||||||| |||||| ||||||| ||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggag-attcccgaataggtaaac 126 Query: 79 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 138 |||| ||||||| |||| | |||||| | || ||||||| |||| || |||||||||||| Sbjct: 127 ctttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacat 183 Query: 139 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 198 ||||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| || Sbjct: 184 cttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaagg 243 Query: 199 gagcagcctaa 209 || || ||||| Sbjct: 244 gaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 518 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 577 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 578 gg 579 || Sbjct: 602 gg 603
>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 294 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 353 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 354 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 413 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 414 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 473 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 474 gtgaaa 479 ||||| Sbjct: 504 atgaaa 509 Score = 127 bits (64), Expect = 4e-26 Identities = 163/191 (85%), Gaps = 4/191 (2%) Strand = Plus / Plus Query: 19 gaaatgcttcggggnagttgaaaataagcatagatccggagnattcccaaataggtcaac 78 |||||||||||||| | ||||||| ||||||||||||| |||||| ||||||| ||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggag-attcccgaataggtaaac 126 Query: 79 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 138 |||| ||||||| |||| | |||||| | || ||||||| |||| ||||||||||||||| Sbjct: 127 ctttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggcgaactgaaacat 183 Query: 139 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 198 ||||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| || Sbjct: 184 cttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaagg 243 Query: 199 gagcagcctaa 209 || || ||||| Sbjct: 244 gaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 518 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 577 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 578 gg 579 || Sbjct: 602 gg 603
>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 294 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 353 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 354 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 413 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 414 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 473 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 474 gtgaaa 479 ||||| Sbjct: 504 atgaaa 509 Score = 119 bits (60), Expect = 1e-23 Identities = 162/191 (84%), Gaps = 4/191 (2%) Strand = Plus / Plus Query: 19 gaaatgcttcggggnagttgaaaataagcatagatccggagnattcccaaataggtcaac 78 |||||||||||||| | ||||||| ||||||||||||| |||||| ||||||| ||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggag-attcccgaataggtaaac 126 Query: 79 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 138 |||| ||||||| |||| | |||||| | || ||||||| |||| || |||||||||||| Sbjct: 127 ctttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacat 183 Query: 139 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 198 ||||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| || Sbjct: 184 cttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaagg 243 Query: 199 gagcagcctaa 209 || || ||||| Sbjct: 244 gaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 518 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 577 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 578 gg 579 || Sbjct: 602 gg 603
>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 294 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 353 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 354 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 413 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 414 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 473 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 474 gtgaaa 479 ||||| Sbjct: 504 atgaaa 509 Score = 119 bits (60), Expect = 1e-23 Identities = 162/191 (84%), Gaps = 4/191 (2%) Strand = Plus / Plus Query: 19 gaaatgcttcggggnagttgaaaataagcatagatccggagnattcccaaataggtcaac 78 |||||||||||||| | ||||||| ||||||||||||| |||||| ||||||| ||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggag-attcccgaataggtaaac 126 Query: 79 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 138 |||| ||||||| |||| | |||||| | || ||||||| |||| || |||||||||||| Sbjct: 127 ctttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacat 183 Query: 139 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 198 ||||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| || Sbjct: 184 cttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaagg 243 Query: 199 gagcagcctaa 209 || || ||||| Sbjct: 244 gaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 518 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 577 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 578 gg 579 || Sbjct: 602 gg 603
>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2689 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 294 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 353 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 354 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 413 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 414 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 473 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 474 gtgaaa 479 ||||| Sbjct: 504 atgaaa 509 Score = 119 bits (60), Expect = 1e-23 Identities = 162/191 (84%), Gaps = 4/191 (2%) Strand = Plus / Plus Query: 19 gaaatgcttcggggnagttgaaaataagcatagatccggagnattcccaaataggtcaac 78 |||||||||||||| | ||||||| ||||||||||||| |||||| ||||||| ||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggag-attcccgaataggtaaac 126 Query: 79 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 138 |||| ||||||| |||| | |||||| | || ||||||| |||| || |||||||||||| Sbjct: 127 ctttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacat 183 Query: 139 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 198 ||||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| || Sbjct: 184 cttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaagg 243 Query: 199 gagcagcctaa 209 || || ||||| Sbjct: 244 gaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 518 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 577 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 578 gg 579 || Sbjct: 602 gg 603
>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 218 bits (110), Expect = 2e-53 Identities = 167/186 (89%) Strand = Plus / Plus Query: 294 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 353 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 354 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 413 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 414 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 473 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 474 gtgaaa 479 ||||| Sbjct: 504 atgaaa 509 Score = 119 bits (60), Expect = 1e-23 Identities = 162/191 (84%), Gaps = 4/191 (2%) Strand = Plus / Plus Query: 19 gaaatgcttcggggnagttgaaaataagcatagatccggagnattcccaaataggtcaac 78 |||||||||||||| | ||||||| ||||||||||||| |||||| ||||||| ||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggag-attcccgaataggtaaac 126 Query: 79 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 138 |||| ||||||| |||| | |||||| | || ||||||| |||| || |||||||||||| Sbjct: 127 ctttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacat 183 Query: 139 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 198 ||||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| || Sbjct: 184 cttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaagg 243 Query: 199 gagcagcctaa 209 || || ||||| Sbjct: 244 gaacaacctaa 254 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 518 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 577 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 578 gg 579 || Sbjct: 602 gg 603
>gb|L43352.1|CRECPRRNLC Chlamydomonas frankii chloroplast large subunit ribosomal RNA (rrnL) gene Length = 6750 Score = 218 bits (110), Expect = 2e-53 Identities = 216/249 (86%), Gaps = 8/249 (3%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg--g 509 | ||| ||||||||||||| ||||||||| | ||| ||||||||||||||| | Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563 Query: 510 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 569 ||| || |||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct: 564 aaa---atgcctgaccgcgtgcctattgaagaatgagccggcgacttatagggagtggct 620 Query: 570 tggttaagg 578 ||||||||| Sbjct: 621 tggttaagg 629 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 127 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 186 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 176 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 235 Query: 187 cgagcgaaatgggagcagcctaaacc 212 |||||||| |||| ||||||||||| Sbjct: 236 cgagcgaaccgggatcagcctaaacc 261
>emb|X68905.1|CHCFRRNL1 Chloroplast Chlamydomonas frankii rrnL gene, exon 1 Length = 1282 Score = 218 bits (110), Expect = 2e-53 Identities = 216/249 (86%), Gaps = 8/249 (3%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 ||||||||||||||| |||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 387 cccgagtagcatgggacacgtgaaatcccgtgtgaatccgcgaggaccacctcgtaaggc 446 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||| ||||||||||||||| |||||| |||| |||| |||||||||||||| Sbjct: 447 taaatactcctgagtgaccgatagcgaaatagtacagtgatggaacggtgaaaagaaccc 506 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg--g 509 | ||| ||||||||||||| ||||||||| | ||| ||||||||||||||| | Sbjct: 507 ctgtgggggagtgaaatagaacatgaaaccgtac---gctgacaagcagtgggagggttg 563 Query: 510 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 569 ||| || |||||||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct: 564 aaa---atgcctgaccgcgtgcctattgaagaatgagccggcgacttatagggagtggct 620 Query: 570 tggttaagg 578 ||||||||| Sbjct: 621 tggttaagg 629 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 127 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 186 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 176 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 235 Query: 187 cgagcgaaatgggagcagcctaaacc 212 |||||||| |||| ||||||||||| Sbjct: 236 cgagcgaaccgggatcagcctaaacc 261
>gb|L49155.1|NEHCPRGOLA Neochloris aquatica chloroplast large-subunit ribosomal RNA (rrnL) gene Length = 5569 Score = 214 bits (108), Expect = 2e-52 Identities = 206/237 (86%), Gaps = 5/237 (2%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||| | Sbjct: 517 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaagac 576 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||| | ||||||||||||| |||||| | || ||||||||||||||||||| Sbjct: 577 taaatactcctgagagaccgatagcgaaatagtacagcgatggaaaggtgaaaagaaccc 636 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 511 || ||| ||||||||||||| ||||| || |||||| |||||||||||| ||| Sbjct: 637 ccgtaggggagtgaaatagaacatgaaatcg---tgagctgacaagcagtggga--ggat 691 Query: 512 agtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 568 ||| ||||||||||||||||||||||||||||||||||||| ||| | |||||| Sbjct: 692 tttgaaatctgaccgcgtgcctgttgaagaatgagccggcgacttataaggagtggc 748 Score = 129 bits (65), Expect = 1e-26 Identities = 83/89 (93%) Strand = Plus / Plus Query: 112 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 171 ||||| |||||||| |||||||||||||| ||||||||||||| ||||| |||||||||| Sbjct: 148 aagaggcaacctggtgaactgaaacatctcagtagccagaggagaagaacgcaaaagcga 207 Query: 172 ttcccgtagtagcggcgagcgaaatggga 200 ||||| ||||||||||||||||||||||| Sbjct: 208 ttcccttagtagcggcgagcgaaatggga 236
>gb|L42985.1|RTCCPRGOL Carteria crucifera large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2920 Score = 212 bits (107), Expect = 1e-51 Identities = 140/151 (92%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 601 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 660 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||| Sbjct: 661 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtaaaaagaaccc 720 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccg 482 || |||| ||||||||||||| |||||||| Sbjct: 721 ccgttggggagtgaaatagaacatgaaaccg 751 Score = 137 bits (69), Expect = 5e-29 Identities = 96/105 (91%) Strand = Plus / Plus Query: 108 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 167 |||||||||| |||| || |||||||||||||| ||||||| ||||||||||||||||| Sbjct: 136 aggcaagagagaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaac 195 Query: 168 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 212 ||||||||| |||||||||||||||||| |||| ||||||||||| Sbjct: 196 gcgattcccatagtagcggcgagcgaaaagggaacagcctaaacc 240 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 520 ctgaccgcgtgcctgttgaagaatgagccggcgact 555 |||||||||||||||||||||||||||||||||||| Sbjct: 796 ctgaccgcgtgcctgttgaagaatgagccggcgact 831
>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2690 Score = 210 bits (106), Expect = 4e-51 Identities = 166/186 (89%) Strand = Plus / Plus Query: 294 agtccagtagccgaaagcatcactagcttatgctctgacccgagtagcatggggcacgtg 353 |||||||||| |||| |||| ||||||||||| |||||||||||||||||| |||| Sbjct: 324 agtccagtagtataaagtatcattagcttatgctttgacccgagtagcatgggacacgga 383 Query: 354 gaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaatactcctgggtgaccgat 413 ||||||| |||||||||||||||||||||||||||||||| |||||| ||||||||| || Sbjct: 384 gaatcccatgtgaatcagcaaggaccaccttgcaaggctagatactcttgggtgaccaat 443 Query: 414 agcgaagtagtaccgtgagggaaaggtgaaaagaacccccagtgggtagtgaaatagaac 473 || |||||||||||||||||||| |||||||||||||| | |||| ||||||||||||| Sbjct: 444 agtgaagtagtaccgtgagggaagggtgaaaagaacccttattggggagtgaaatagaac 503 Query: 474 gtgaaa 479 ||||| Sbjct: 504 atgaaa 509 Score = 119 bits (60), Expect = 1e-23 Identities = 156/183 (85%), Gaps = 4/183 (2%) Strand = Plus / Plus Query: 19 gaaatgcttcggggnagttgaaaataagcatagatccggagnattcccaaataggtcaac 78 |||||||||||||| | ||||||| ||||||||||||| |||||| ||||||| ||| Sbjct: 68 gaaatgcttcggggagttaaaaaataaacatagatccggag-attcccgaataggtaaac 126 Query: 79 cttttaaactgcctgctgaatccatgagcaggcaagagacaacctggcgaactgaaacat 138 |||| ||||||| |||| | |||||| | || ||||||| |||| || |||||||||||| Sbjct: 127 ctttaaaactgc-tgcttattccatg-gaagacaagaga-aacccggtgaactgaaacat 183 Query: 139 cttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagcgaaatgg 198 ||||||| ||||||||||| |||||||||| |||||| |||||| ||||| ||||| || Sbjct: 184 cttagtatccagaggaaaataaagcaaaagttattcccatagtagtggcgaacgaaaagg 243 Query: 199 gag 201 ||| Sbjct: 244 gag 246 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Plus Query: 518 ctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaag 577 |||||||||||||| || |||||||||||||||| ||||||| | ||||| |||||||| Sbjct: 542 ctctgaccgcgtgcgtgctgaagaatgagccggcaactcataagtagtggactggttaag 601 Query: 578 gg 579 || Sbjct: 602 gg 603
>gb|L43500.1|RTCCPRRNL Carteria olivieri Length = 5667 Score = 206 bits (104), Expect = 6e-50 Identities = 140/152 (92%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 691 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 750 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||||||||||||||||||| |||||||| ||||||| ||| |||||||||| Sbjct: 751 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaagggtaaaaagaaccc 810 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgt 483 || |||| ||||||||||||| ||||||||| Sbjct: 811 ccgttggggagtgaaatagaacatgaaaccgt 842 Score = 145 bits (73), Expect = 2e-31 Identities = 97/105 (92%) Strand = Plus / Plus Query: 108 aggcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaa 167 |||||||||| |||| || |||||||||||||| ||||||| |||||||||||||||||| Sbjct: 137 aggcaagagagaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaa 196 Query: 168 gcgattcccgtagtagcggcgagcgaaatgggagcagcctaaacc 212 ||||||||| |||||||||||||||||| |||| ||||||||||| Sbjct: 197 gcgattcccttagtagcggcgagcgaaaagggaacagcctaaacc 241 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 520 ctgaccgcgtgcctgttgaagaatgagccggcgact 555 |||||||||||||||||||||||||||||||||||| Sbjct: 895 ctgaccgcgtgcctgttgaagaatgagccggcgact 930
>gb|L42860.1|CGZCPRGOL Chlorogonium elongatum chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CelI gene Length = 3779 Score = 206 bits (104), Expect = 6e-50 Identities = 142/152 (93%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 409 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 468 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 469 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 528 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgt 483 || || || ||||||||||||| ||||||||| Sbjct: 529 cc-gtagg-agtgaaatagaacatgaaaccgt 558 Score = 123 bits (62), Expect = 7e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 131 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 190 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 164 tgaaacatcttagtagctggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 223 Query: 191 cgaaatgggagcagcctaaacc 212 |||| |||| ||||||||||| Sbjct: 224 cgaaccgggaacagcctaaacc 245 Score = 75.8 bits (38), Expect = 1e-10 Identities = 47/50 (94%) Strand = Plus / Plus Query: 519 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 568 ||||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 585 tctgaccgcgtgcctgttgaagaatgagccggcgacttagaggaagtggc 634
>gb|L42859.1|CRECPRGOL Chlamydomonas mutabilis chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmuI gene Length = 3744 Score = 206 bits (104), Expect = 6e-50 Identities = 207/238 (86%), Gaps = 10/238 (4%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 |||||||||||||| |||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 436 cccgagtagcatggaacacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 495 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||| ||||||||||||||||||||| |||||| | || |||||||||||||| |||| Sbjct: 496 taaatattcctgggtgaccgatagcgaaatagtactgcgaaggaaaggtgaaaagtaccc 555 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagggg 509 || |||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 556 ccgttggggagtgaaatagaacatgaaaccgtttgctga-----caagcagtgggagggt 610 Query: 510 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtgg 567 | | || | |||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 611 aca--gaac-ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtgg 665 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 127 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 186 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 157 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 216 Query: 187 cgagcgaaatgggagcagcctaaacc 212 |||||||| |||| ||||||||||| Sbjct: 217 cgagcgaaccgggaacagcctaaacc 242
>gb|L42986.1|RTCCPRGOLA Carteria lunzensis Length = 4448 Score = 202 bits (102), Expect = 9e-49 Identities = 217/248 (87%), Gaps = 8/248 (3%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 442 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 501 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 450 |||||||||||||||||||||||||||| |||||||| ||||||| ||| ||| |||||| Sbjct: 502 taaatactcctgggtgaccgatagcgaaatagtaccgcgagggaatggttaaatagaacc 561 Query: 451 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 510 ||| || || ||||||||||||| ||||||||| | ||| |||||||||||||||| Sbjct: 562 ccc-gtagg-agtgaaatagaacatgaaaccgttc---gctgacaagcagtgggagggg- 615 Query: 511 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 570 ||| | |||||||||||||||||||||||||||||||||||| ||| | |||||| Sbjct: 616 gtttga-ccctgaccgcgtgcctgttgaagaatgagccggcgacttataagaagtggcca 674 Query: 571 ggttaagg 578 |||||||| Sbjct: 675 ggttaagg 682 Score = 139 bits (70), Expect = 1e-29 Identities = 94/102 (92%) Strand = Plus / Plus Query: 112 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 171 ||||| ||||| || ||| |||||||||||||||||| |||||||||||||||||||||| Sbjct: 141 aagaggcaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaaagcga 200 Query: 172 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 213 |||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 201 ttcccggagtagcggcgagcgaaacgggaacagcctaaaccg 242
>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2840 Score = 202 bits (102), Expect = 9e-49 Identities = 117/122 (95%) Strand = Plus / Plus Query: 331 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 390 ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| Sbjct: 373 acccgagtagcatggggcacgtgaaatcccgtgtgaatccgcaaggaccaccttgcaagg 432 Query: 391 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 450 |||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 433 ctaaatactcctagatgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaacc 492 Query: 451 cc 452 || Sbjct: 493 cc 494 Score = 159 bits (80), Expect = 1e-35 Identities = 98/104 (94%) Strand = Plus / Plus Query: 110 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagc 169 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 147 gcaagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaacgc 206 Query: 170 gattcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 213 ||||||| ||||||||||||||||| |||| ||||||||||| Sbjct: 207 gattcccttagtagcggcgagcgaagcgggaatagcctaaaccg 250 Score = 105 bits (53), Expect = 2e-19 Identities = 56/57 (98%) Strand = Plus / Plus Query: 522 gaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 578 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 562 gaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaagg 618
>emb|X52737.1|CHCO23S Coleochaete orbicularis chloroplast DNA for transfer RNA-Ala, transfer RNA-Ile and 23S ribosomal RNA Length = 2305 Score = 202 bits (102), Expect = 9e-49 Identities = 135/146 (92%) Strand = Plus / Plus Query: 336 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 395 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 2152 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 2211 Query: 396 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 455 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 2212 tactcctgggtgaccgatagcgaagaagtaccgtgagggaaaggtgaaaagaacccccat 2271 Query: 456 tgggtagtgaaatagaacgtgaaacc 481 ||| ||||||||||||| ||||||| Sbjct: 2272 aggggagtgaaatagaacatgaaacc 2297 Score = 143 bits (72), Expect = 7e-31 Identities = 194/232 (83%), Gaps = 2/232 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| ||||||||||||||||||||| || || || ||| ||| ||||| || Sbjct: 1819 aagggcgtagtaagcgacgaaatgcttcgggg-agctgcgaacaagtataaatccgaag- 1876 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| |||||| ||||| || ||| |||| |||| || | |||| ||||| || Sbjct: 1877 attcccgaatagggtaacctcttgtactacctgtataatcaataatcaggttagagaaaa 1936 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 ||| | ||||||||||||||||||||| ||||||| | |||||||||||||||||| ||| Sbjct: 1937 cctagtgaactgaaacatcttagtagctagaggaataaaaagcaaaagcgattcccttag 1996 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtggga 232 ||| ||||||||||| |||| | ||||||||||| ||| ||||||||||||| Sbjct: 1997 tagtggcgagcgaaacgggaaccgcctaaaccgttaaagcggggttgtggga 2048
>gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast, complete genome Length = 161452 Score = 200 bits (101), Expect = 4e-48 Identities = 214/249 (85%), Gaps = 12/249 (4%) Strand = Plus / Minus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 155833 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 155774 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 450 |||||||||||| ||||||||||| |||| ||||| | || |||||||||||| |||||| Sbjct: 155773 taaatactcctgagtgaccgatagtgaagaagtacagcgatggaaaggtgaaatagaacc 155714 Query: 451 cccagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 509 ||| || ||| ||||||| ||||| |||||||| | |||| |||||||||||||| Sbjct: 155713 ccctgtcggggagtgaaagagaacatgaaaccg---taagctgacaagcagtgggaggat 155657 Query: 510 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 569 || ||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 155656 aa-------tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggca 155604 Query: 570 tggttaagg 578 |||||||| Sbjct: 155603 gggttaagg 155595 Score = 200 bits (101), Expect = 4e-48 Identities = 214/249 (85%), Gaps = 12/249 (4%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 78059 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 78118 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 450 |||||||||||| ||||||||||| |||| ||||| | || |||||||||||| |||||| Sbjct: 78119 taaatactcctgagtgaccgatagtgaagaagtacagcgatggaaaggtgaaatagaacc 78178 Query: 451 cccagt-gggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggg 509 ||| || ||| ||||||| ||||| |||||||| | |||| |||||||||||||| Sbjct: 78179 ccctgtcggggagtgaaagagaacatgaaaccg---taagctgacaagcagtgggaggat 78235 Query: 510 aaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 569 || ||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 78236 aa-------tctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggca 78288 Query: 570 tggttaagg 578 |||||||| Sbjct: 78289 gggttaagg 78297 Score = 145 bits (73), Expect = 2e-31 Identities = 94/101 (93%) Strand = Plus / Minus Query: 112 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 171 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 156138 aagaggcaacccggtgaactgaaacatctcagtagccggaggaaaagaaagcaaaagcga 156079 Query: 172 ttcccgtagtagcggcgagcgaaatgggagcagcctaaacc 212 |||||| |||||||||||||||||||||| ||||||||||| Sbjct: 156078 ttcccggagtagcggcgagcgaaatgggaacagcctaaacc 156038 Score = 145 bits (73), Expect = 2e-31 Identities = 94/101 (93%) Strand = Plus / Plus Query: 112 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 171 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 77754 aagaggcaacccggtgaactgaaacatctcagtagccggaggaaaagaaagcaaaagcga 77813 Query: 172 ttcccgtagtagcggcgagcgaaatgggagcagcctaaacc 212 |||||| |||||||||||||||||||||| ||||||||||| Sbjct: 77814 ttcccggagtagcggcgagcgaaatgggaacagcctaaacc 77854
>gb|L42989.1|CRECPRGOLC Chlamydomonas humicola chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-ChuI gene Length = 4005 Score = 198 bits (100), Expect = 1e-47 Identities = 209/242 (86%), Gaps = 10/242 (4%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 403 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 462 Query: 392 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 450 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 463 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 522 Query: 451 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 508 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 523 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 577 Query: 509 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 568 | | | | |||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 578 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgacttagagggagtggc 635 Query: 569 tt 570 || Sbjct: 636 tt 637 Score = 103 bits (52), Expect = 6e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 131 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 190 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 178 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 237 Query: 191 cgaa 194 |||| Sbjct: 238 cgaa 241
>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CmoI genes Length = 8176 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 558 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 617 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 618 taaatactcctgggtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaacct 677 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgt 483 | | | ||||||||||||| ||||||||| Sbjct: 678 ctgaagaggagtgaaatagaacatgaaaccgt 709 Score = 131 bits (66), Expect = 3e-27 Identities = 78/82 (95%) Strand = Plus / Plus Query: 131 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 190 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 160 tgaaacatcttagtagccggaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 219 Query: 191 cgaaatgggagcagcctaaacc 212 |||| ||||| |||||||||| Sbjct: 220 cgaactgggactagcctaaacc 241 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 520 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 568 |||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 745 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggc 793
>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CkoI genes Length = 5105 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgt 483 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 113 bits (57), Expect = 7e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 127 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 186 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 234 Query: 187 cgagcgaaatgggagcagcctaaac 211 |||||||| ||||| |||||||||| Sbjct: 235 cgagcgaactgggaacagcctaaac 259 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 521 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 569 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629
>gb|L43356.1|CRECPRRNLG Chlamydomonas zebra chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4038 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgt 483 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 127 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 186 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 187 cgagcgaaatgggagcagcctaaacc 212 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 91.7 bits (46), Expect = 2e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 521 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 578 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 635 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggttaagg 692
>gb|L43351.1|CRECPRRNLB Chlamydomonas agloeformis chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3978 Score = 198 bits (100), Expect = 1e-47 Identities = 141/152 (92%), Gaps = 2/152 (1%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 412 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 471 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||| ||||||||||| ||| |||||||| |||||||||||||||||||||| Sbjct: 472 taaatactcctgagtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaagaaccc 531 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgt 483 || || || ||||||||||||| ||||||||| Sbjct: 532 cc-gtagg-agtgaaatagaacatgaaaccgt 561 Score = 123 bits (62), Expect = 7e-25 Identities = 77/82 (93%) Strand = Plus / Plus Query: 131 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 190 ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctggaggaaaataaagcaaaagcgattcccgtagtagcggcgag 218 Query: 191 cgaaatgggagcagcctaaacc 212 ||||| |||| ||||||||||| Sbjct: 219 cgaaacgggaacagcctaaacc 240 Score = 75.8 bits (38), Expect = 1e-10 Identities = 54/58 (93%), Gaps = 1/58 (1%) Strand = Plus / Plus Query: 520 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc-ttggttaa 576 |||||||||||||||||||||||||||||||||||| | ||| |||||| |||||||| Sbjct: 593 ctgaccgcgtgcctgttgaagaatgagccggcgacttagaggaagtggcattggttaa 650
>gb|L42988.1|CRECPRGOLB Chlamydomonas applanata large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2863 Score = 198 bits (100), Expect = 1e-47 Identities = 209/242 (86%), Gaps = 10/242 (4%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 384 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 443 Query: 392 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 450 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 444 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 503 Query: 451 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 508 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 504 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 558 Query: 509 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 568 | | | | |||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 559 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgacttagagggagtggc 616 Query: 569 tt 570 || Sbjct: 617 tt 618 Score = 103 bits (52), Expect = 6e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 131 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 190 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 159 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 218 Query: 191 cgaa 194 |||| Sbjct: 219 cgaa 222
>tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloroplast, complete genome Length = 203828 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Minus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 151990 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 151931 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 151930 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 151871 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgt 483 | |||| ||||||||||||| ||||||||| Sbjct: 151870 ctgttggggagtgaaatagaacatgaaaccgt 151839 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 42213 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 42272 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 42273 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 42332 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgt 483 | |||| ||||||||||||| ||||||||| Sbjct: 42333 ctgttggggagtgaaatagaacatgaaaccgt 42364 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 127 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 186 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 152206 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 152147 Query: 187 cgagcgaaatgggagcagcctaaacc 212 |||||||| |||| ||||||||||| Sbjct: 152146 cgagcgaaccgggaacagcctaaacc 152121 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 127 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 186 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 41997 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 42056 Query: 187 cgagcgaaatgggagcagcctaaacc 212 |||||||| |||| ||||||||||| Sbjct: 42057 cgagcgaaccgggaacagcctaaacc 42082 Score = 91.7 bits (46), Expect = 2e-15 Identities = 55/58 (94%) Strand = Plus / Minus Query: 521 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 578 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 151806 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggttaagg 151749 Score = 91.7 bits (46), Expect = 2e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 521 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 578 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 42397 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggttaagg 42454
>emb|X68921.1|CHCHRRNL1 Chloroplast Chlamydomonas humicola rrnL gene, exon 1 Length = 2524 Score = 198 bits (100), Expect = 1e-47 Identities = 209/242 (86%), Gaps = 10/242 (4%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 403 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 462 Query: 392 ta-aatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 450 || |||||||||| ||||||||||| ||| ||||||| ||||||||||||||||| ||| Sbjct: 463 tataatactcctgagtgaccgatagtgaaagagtaccgcgagggaaaggtgaaaagtacc 522 Query: 451 cccagtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggaggg 508 ||| ||| ||||||||||||| |||||||| |||||| ||||||||||||||| Sbjct: 523 cccgtaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggaggg 577 Query: 509 gaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 568 | | | | |||||||||||||||||||||||||||||||||||| | ||| |||||| Sbjct: 578 gttatgg--ccctgaccgcgtgcctgttgaagaatgagccggcgacttagagggagtggc 635 Query: 569 tt 570 || Sbjct: 636 tt 637 Score = 103 bits (52), Expect = 6e-19 Identities = 61/64 (95%) Strand = Plus / Plus Query: 131 tgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgag 190 ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 178 tgaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcggcgag 237 Query: 191 cgaa 194 |||| Sbjct: 238 cgaa 241
>emb|X68919.1|CHCZRRNL1 Chloroplast Chlamydomonas zebra rrnL gene, exon 1 Length = 2572 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 451 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 510 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 511 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 570 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgt 483 | |||| ||||||||||||| ||||||||| Sbjct: 571 ctgttggggagtgaaatagaacatgaaaccgt 602 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 127 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 186 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 187 cgagcgaaatgggagcagcctaaacc 212 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 91.7 bits (46), Expect = 2e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 521 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 578 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 635 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggttaagg 692
>emb|X68927.1|CHCKRRNL1 Chloroplast Chlamydomonas komma rrnL gene, exon 1 Length = 1285 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgt 483 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 113 bits (57), Expect = 7e-22 Identities = 78/85 (91%) Strand = Plus / Plus Query: 127 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 186 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 234 Query: 187 cgagcgaaatgggagcagcctaaac 211 |||||||| ||||| |||||||||| Sbjct: 235 cgagcgaactgggaacagcctaaac 259 Score = 81.8 bits (41), Expect = 2e-12 Identities = 47/49 (95%) Strand = Plus / Plus Query: 521 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggct 569 ||||||||||||||||||||||||||||||||||| ||||| ||||||| Sbjct: 581 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggct 629
>emb|X16686.1|CHCR7S3S C. reinhardtii plastid DNA for 7S, 3S and 23S rRNA Length = 2603 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 385 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 444 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 445 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 504 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgt 483 | |||| ||||||||||||| ||||||||| Sbjct: 505 ctgttggggagtgaaatagaacatgaaaccgt 536 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 127 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 186 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 169 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 228 Query: 187 cgagcgaaatgggagcagcctaaacc 212 |||||||| |||| ||||||||||| Sbjct: 229 cgagcgaaccgggaacagcctaaacc 254 Score = 91.7 bits (46), Expect = 2e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 521 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 578 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 569 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggttaagg 626
>gb|J01398.1|CRECPRG23 c.reinhardtii (algae) chloroplast 3s, 7s & 23s(5') rrna gene Length = 814 Score = 198 bits (100), Expect = 1e-47 Identities = 139/152 (91%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 470 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 529 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 530 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 589 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgt 483 | |||| ||||||||||||| ||||||||| Sbjct: 590 ctgttggggagtgaaatagaacatgaaaccgt 621 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 127 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 186 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 254 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 313 Query: 187 cgagcgaaatgggagcagcctaaacc 212 |||||||| |||| ||||||||||| Sbjct: 314 cgagcgaaccgggaacagcctaaacc 339 Score = 91.7 bits (46), Expect = 2e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 521 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 578 ||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 654 tgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggctgggttaagg 711
>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial sequence Length = 2446 Score = 196 bits (99), Expect = 6e-47 Identities = 197/229 (86%), Gaps = 3/229 (1%) Strand = Plus / Plus Query: 335 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 394 ||||||||||||||||| |||||||| ||||||||||| |||||||||| | |||||||| Sbjct: 1 gagtagcatggggcacgaggaatcccatgtgaatcagcgaggaccacctcgtaaggctaa 60 Query: 395 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 454 ||||| ||| ||||||||||| ||| ||||||| ||||||||||||||||||||||| Sbjct: 61 atactactgtgtgaccgatagtgaaccagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 455 gtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaaagt 514 ||| ||||||||||||| |||||||| | |||| |||||||||||||| | | Sbjct: 121 aaggggagtgaaatagaacatgaaaccg---ttagcttacaagcagtgggaggactattt 177 Query: 515 gatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggca 563 | ||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 178 aaagtctgaccgcgtgcctgttgaagaatgagccggcgacttataggca 226
>dbj|AP006444.1| Brassica napus mitochondrial DNA, complete genome Length = 221853 Score = 196 bits (99), Expect = 6e-47 Identities = 151/163 (92%), Gaps = 4/163 (2%) Strand = Plus / Minus Query: 5 gcgtagcaagcgacgaaa-tgcttcggggnagttgaaaataagcatagatccggagnatt 63 |||||| ||||||||||| |||||||||| |||||||||||||| ||||||||||| ||| Sbjct: 89827 gcgtagtaagcgacgaaaatgcttcgggg-agttgaaaataagcgtagatccggag-att 89770 Query: 64 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacct 123 || ||||||| |||||||| |||||| ||||||||||||| |||||||||||||||||| Sbjct: 89769 ccggaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaagagacaacct 89711 Query: 124 ggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 166 ||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 89710 ggcgaactgaaacatcttactagccagaggaaaagaaagcaaa 89668 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 406 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 120438 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 120483
>gb|AC172860.1| Brassica rapa subsp. pekinensis clone KBrB042G11, complete sequence Length = 124347 Score = 196 bits (99), Expect = 6e-47 Identities = 151/163 (92%), Gaps = 4/163 (2%) Strand = Plus / Plus Query: 5 gcgtagcaagcgacgaaa-tgcttcggggnagttgaaaataagcatagatccggagnatt 63 |||||| ||||||||||| |||||||||| |||||||||||||| ||||||||||| ||| Sbjct: 443 gcgtagtaagcgacgaaaatgcttcgggg-agttgaaaataagcgtagatccggag-att 500 Query: 64 cccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaacct 123 || ||||||| |||||||| |||||| ||||||||||||| |||||||||||||||||| Sbjct: 501 ccggaataggttaaccttttgaactgc-tgctgaatccatgggcaggcaagagacaacct 559 Query: 124 ggcgaactgaaacatcttagtagccagaggaaaagaaagcaaa 166 ||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 560 ggcgaactgaaacatcttactagccagaggaaaagaaagcaaa 602 Score = 67.9 bits (34), Expect = 4e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 406 tgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 42056 tgaccgatagcgtacaagtaccgtgagggaaaggtgaaaagaaccc 42101
>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3669 Score = 194 bits (98), Expect = 2e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 371 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 430 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 452 ccagtgggtagtgaaatagaacgtgaaacc 481 | ||| ||||||||||||| ||||||| Sbjct: 491 ctgtaggggagtgaaatagaacatgaaacc 520 Score = 99.6 bits (50), Expect = 1e-17 Identities = 77/86 (89%) Strand = Plus / Plus Query: 127 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 186 ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 155 gaactgaaacatcttagtagctgaaggaaaagaaagcaaacgcgattccctgagtagtgg 214 Query: 187 cgagcgaaatgggagcagcctaaacc 212 |||||||||||||| | ||||||||| Sbjct: 215 cgagcgaaatgggaacggcctaaacc 240 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 520 ctgaccgcgtgcctgttgaagaatgagccggcgact 555 |||||||||||||||||||||||||||||||||||| Sbjct: 554 ctgaccgcgtgcctgttgaagaatgagccggcgact 589
>dbj|AP003265.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0490D09 Length = 154430 Score = 194 bits (98), Expect = 2e-46 Identities = 107/110 (97%) Strand = Plus / Minus Query: 440 tgaaaagaacccccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagca 499 ||||||||||||| || |||||||||||||||||||||||| |||||||||||||||||| Sbjct: 107567 tgaaaagaacccctagggggtagtgaaatagaacgtgaaacagtgctgagctcccaagca 107508 Query: 500 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 549 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 107507 gtgggaggggaaagtgatctctgaccgcgtgcctgttgaagaatgagccg 107458
>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete sequence; chloroplast gene for chloroplast product Length = 2886 Score = 194 bits (98), Expect = 2e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 336 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 395 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 385 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 444 Query: 396 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 455 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 445 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 504 Query: 456 tgggtagtgaaatagaacgtgaaacc 481 ||| ||||||||||||| ||||||| Sbjct: 505 aggggagtgaaatagaacatgaaacc 530 Score = 178 bits (90), Expect = 1e-41 Identities = 200/234 (85%), Gaps = 2/234 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| ||||||||||||||||||||| || || || ||| ||||||||| || Sbjct: 52 aagggcgtagtaagcgacgaaatgcttcgggg-agctgcgaacaagtatagatccgaag- 109 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| |||||| |||||| || ||| |||| ||| ||| | |||| ||||| || Sbjct: 110 attcccgaatagggcaacctcttgtactacctgtaaaatacataatcaggttagagaaaa 169 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 ||| | ||||||||||||||||||||| ||||||| | |||||||||||||||||| ||| Sbjct: 170 cctagtgaactgaaacatcttagtagctagaggaataaaaagcaaaagcgattcccttag 229 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 234 ||| ||||||||||| |||| ||||||||||||||||| ||||||||||||||| Sbjct: 230 tagtggcgagcgaaacgggaacagcctaaaccgtgaaagcggggttgtgggaga 283 Score = 105 bits (53), Expect = 2e-19 Identities = 59/61 (96%) Strand = Plus / Plus Query: 521 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 580 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 567 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 626 Query: 581 a 581 | Sbjct: 627 a 627
>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 6131 Score = 194 bits (98), Expect = 2e-46 Identities = 134/146 (91%) Strand = Plus / Plus Query: 336 agtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaaa 395 ||||| ||||| |||||| |||||| | |||||||||||||||||||||| ||||||||| Sbjct: 3419 agtagtatgggacacgtgaaatcccttatgaatcagcaaggaccaccttgtaaggctaaa 3478 Query: 396 tactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacccccag 455 |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| Sbjct: 3479 tactcctgggtgaccgatagtgaagaagtaccgtgagggaaaggtgaaaagaacccccat 3538 Query: 456 tgggtagtgaaatagaacgtgaaacc 481 ||| ||||||||||||| ||||||| Sbjct: 3539 aggggagtgaaatagaacatgaaacc 3564 Score = 163 bits (82), Expect = 8e-37 Identities = 198/234 (84%), Gaps = 2/234 (0%) Strand = Plus / Plus Query: 1 aagggcgtagcaagcgacgaaatgcttcggggnagttgaaaataagcatagatccggagn 60 |||||||||| |||||||||||||||| |||| || || || ||| ||||||||| || Sbjct: 3086 aagggcgtagtaagcgacgaaatgctttgggg-agctgcgaacaagtatagatccgaag- 3143 Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| |||||| |||||| || ||| |||| ||| ||| |||| ||||| || Sbjct: 3144 attcccgaatagggcaacctcttgtactacctgtaaaatacatagtcaggttagagaaaa 3203 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 ||| | ||||||||||||||||||||| ||||||| | |||||||||||||||||| ||| Sbjct: 3204 cctagtgaactgaaacatcttagtagctagaggaataaaaagcaaaagcgattcccttag 3263 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccgtgaaaacggggttgtgggaga 234 ||| ||||||||||| |||| ||||||||||||||||| ||||||||||||||| Sbjct: 3264 tagtggcgagcgaaacgggaacagcctaaaccgtgaaagcggggttgtgggaga 3317 Score = 105 bits (53), Expect = 2e-19 Identities = 59/61 (96%) Strand = Plus / Plus Query: 521 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggga 580 ||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| Sbjct: 3601 tgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcatggttaaggga 3660 Query: 581 a 581 | Sbjct: 3661 a 3661
>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence Length = 150613 Score = 194 bits (98), Expect = 2e-46 Identities = 137/150 (91%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 25180 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 25239 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 25240 taaatactcctaggtgaccgatagcgaactagtaccgtgagggaaaggtgaaaagaaccc 25299 Query: 452 ccagtgggtagtgaaatagaacgtgaaacc 481 | ||| ||||||||||||| ||||||| Sbjct: 25300 ctgtaggggagtgaaatagaacatgaaacc 25329 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 127 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 186 ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||| || Sbjct: 24964 gaactgaaacatcttagtagctgaaggaaaagaaagcaaacgcgattccctgagtagtgg 25023 Query: 187 cgagcgaaatgggagcagcctaaacc 212 |||||||||||||| ||||||||||| Sbjct: 25024 cgagcgaaatgggaacagcctaaacc 25049 Score = 71.9 bits (36), Expect = 2e-09 Identities = 36/36 (100%) Strand = Plus / Plus Query: 520 ctgaccgcgtgcctgttgaagaatgagccggcgact 555 |||||||||||||||||||||||||||||||||||| Sbjct: 25363 ctgaccgcgtgcctgttgaagaatgagccggcgact 25398
>gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosomal RNA gene, partial sequence Length = 2364 Score = 192 bits (97), Expect = 9e-46 Identities = 136/149 (91%) Strand = Plus / Plus Query: 335 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 394 ||||||||||||||||||| |||||||||||||||| | |||||||||| | |||||||| Sbjct: 1 gagtagcatggggcacgtgaaatcccgtgtgaatcatcgaggaccacctcgaaaggctaa 60 Query: 395 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 454 ||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||| Sbjct: 61 atactcctgtgtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccccgg 120 Query: 455 gtgggtagtgaaatagaacgtgaaaccgt 483 | ||| ||||||||||||| ||||||||| Sbjct: 121 gaggggagtgaaatagaacatgaaaccgt 149 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Plus Query: 528 gtgcctgttgaagaatgagccggcgactcatagg 561 |||||||||||||||||||||||||||| ||||| Sbjct: 191 gtgcctgttgaagaatgagccggcgacttatagg 224
>gb|L42987.1|RTCCPRGOLB Carteria radiosa large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2864 Score = 192 bits (97), Expect = 9e-46 Identities = 196/225 (87%), Gaps = 8/225 (3%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 506 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 565 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 450 |||||||| ||| ||||||||||||||| |||||||| ||||||| ||| ||| |||||| Sbjct: 566 taaatactactgagtgaccgatagcgaaatagtaccgcgagggaacggttaaatagaacc 625 Query: 451 cccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagggga 510 ||| || || ||||||||||||| ||||||||| | ||| |||||||||||||||| Sbjct: 626 ccc-gtagggagtgaaatagaacatgaaaccgttc---gctgacaagcagtgggaggggt 681 Query: 511 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgact 555 || | |||||||||||||||||||||||||||||||||||| Sbjct: 682 tag---accctgaccgcgtgcctgttgaagaatgagccggcgact 723 Score = 139 bits (70), Expect = 1e-29 Identities = 94/102 (92%) Strand = Plus / Plus Query: 112 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 171 ||||| ||||| || |||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 140 aagaggcaacccggtgaactgaaacatctaagtagccggaggaaaagaaagcaaaagcga 199 Query: 172 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 213 |||||| ||||||||||||||||| |||| |||||||||||| Sbjct: 200 ttcccggagtagcggcgagcgaaaagggaacagcctaaaccg 241
>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-CcaI genes Length = 5999 Score = 190 bits (96), Expect = 4e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 |||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 453 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 ||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 454 aaaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 513 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgt 483 | |||| ||||||||||||| ||||||||| Sbjct: 514 ctgttggggagtgaaatagaacatgaaaccgt 545 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 127 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 186 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 157 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 216 Query: 187 cgagcgaaatgggagcagcctaaacc 212 |||||||| |||| ||||||||||| Sbjct: 217 cgagcgaaccgggaacagcctaaacc 242 Score = 83.8 bits (42), Expect = 6e-13 Identities = 54/58 (93%) Strand = Plus / Plus Query: 521 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 578 ||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| Sbjct: 578 tgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggccgggttaagg 635
>gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 3397 Score = 190 bits (96), Expect = 4e-45 Identities = 213/248 (85%), Gaps = 8/248 (3%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 ||||||||||||||| ||||||||||||||||||||||||| |||||||||| | ||||| Sbjct: 567 cccgagtagcatgggacacgtggaatcccgtgtgaatcagcgaggaccacctcgtaaggc 626 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||||||||||||||| | | ||||||| ||||||| ||||| |||||||| Sbjct: 627 taaatactcctgggtgaccgatagtgcaa-agtaccgcgagggaatggtgataagaaccc 685 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggggaa 511 | ||| ||||||||||||| |||||||| | |||| ||||||||||||| | Sbjct: 686 ctgtaggggagtgaaatagaacatgaaaccg---taagctgacaagcagtgggagc---a 739 Query: 512 agtgatctc-tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 570 ||| | || ||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 740 agttaacttgtgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggcaa 799 Query: 571 ggttaagg 578 |||||||| Sbjct: 800 ggttaagg 807 Score = 119 bits (60), Expect = 1e-23 Identities = 90/100 (90%) Strand = Plus / Plus Query: 113 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 172 |||||||||| | ||| ||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 140 agagacaacccagtgaattgaaacatcttagtagctggaggaaaagaaagcaaacgcgat 199 Query: 173 tcccgtagtagcggcgagcgaaatgggagcagcctaaacc 212 |||||||||||||||||||||| |||| ||||||||||| Sbjct: 200 tcccgtagtagcggcgagcgaaccgggatcagcctaaacc 239
>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene Length = 2904 Score = 190 bits (96), Expect = 4e-45 Identities = 138/152 (90%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 ||||||||||||||| |||||| |||||||||||||||||| |||||||||| | ||||| Sbjct: 402 cccgagtagcatgggacacgtgaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 461 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 462 taaatactcctgagtgaccgatagcgaaatagtaccacgagggaaaggtgaaaagaaccc 521 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgt 483 | |||| ||||||||||||| ||||||||| Sbjct: 522 ctgttggggagtgaaatagaacatgaaaccgt 553 Score = 115 bits (58), Expect = 2e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 127 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 186 |||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 175 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagcgg 234 Query: 187 cgagcgaaatgggagcagcctaaacc 212 |||||||| |||| ||||||||||| Sbjct: 235 cgagcgaaccgggaacagcctaaacc 260 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 521 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaaggg 579 |||| |||||||||||||||||||||||||||||| ||||| ||||||| ||||||||| Sbjct: 586 tgactgcgtgcctgttgaagaatgagccggcgacttataggaagtggctaggttaaggg 644
>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome Length = 200799 Score = 186 bits (94), Expect = 6e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Minus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 171123 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 171064 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 171063 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 171004 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 507 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 171003 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 170951 Score = 186 bits (94), Expect = 6e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 121803 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 121862 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 121863 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 121922 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 507 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 121923 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 121975 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Minus Query: 113 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 172 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 171357 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 171298 Query: 173 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 213 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 171297 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 171257 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 113 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 172 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 121569 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 121628 Query: 173 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 213 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 121629 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 121669 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Minus Query: 520 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 578 |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 170941 ctgaccgcgtgcctgttgaagaatgagccggcgacttctagggagtggcttggttaagg 170883 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 520 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 578 |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 121985 ctgaccgcgtgcctgttgaagaatgagccggcgacttctagggagtggcttggttaagg 122043
>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2937 Score = 186 bits (94), Expect = 6e-44 Identities = 156/176 (88%), Gaps = 3/176 (1%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 |||||||||||||||||||||| ||||||||||||||| || |||||||||| | ||||| Sbjct: 394 cccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaaggc 453 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||||||||||||||| ||| |||||||| ||||||| |||||||||||||| Sbjct: 454 taaatactcctgggtgaccgatagtgaattagtaccgcgagggaatggtgaaaagaaccc 513 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggagg 507 ||| ||| ||||||| ||| | |||||||| |||||| |||||||||||||| Sbjct: 514 ccatcggggagtgaaagagaccatgaaaccg---tgagcttacaagcagtgggagg 566 Score = 121 bits (61), Expect = 3e-24 Identities = 91/101 (90%) Strand = Plus / Plus Query: 113 agagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgat 172 |||| |||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 160 agaggcaacctagcgaattgaaacatcttagtagctagaggaaaagaaagcaaacgcgat 219 Query: 173 tcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 213 |||| ||||||||||||||| | |||| |||||||||||| Sbjct: 220 tcccccagtagcggcgagcgacaagggatcagcctaaaccg 260 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 520 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 578 |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct: 576 ctgaccgcgtgcctgttgaagaatgagccggcgacttctagggagtggcttggttaagg 634
>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 2834 Score = 184 bits (93), Expect = 2e-43 Identities = 139/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||||| Sbjct: 446 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaaggc 505 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtg-aaaagaacc 450 |||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||| || Sbjct: 506 taaatactcctgagtgaccgatagcgaactagtaccgtgagggaaaggtgaaaaagatcc 565 Query: 451 cccagtgggtagtgaaatagaacgtgaaaccgt 483 ||| ||| ||||||||||||| ||||||||| Sbjct: 566 cccgtagggaagtgaaatagaacatgaaaccgt 598 Score = 131 bits (66), Expect = 3e-27 Identities = 93/102 (91%) Strand = Plus / Plus Query: 112 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 171 |||||| |||| || ||| ||||||||||||||| || ||||||||||||||||| |||| Sbjct: 148 aagagataacccggtgaattgaaacatcttagtaaccggaggaaaagaaagcaaacgcga 207 Query: 172 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 213 ||||| ||||||||||||||||||||||| |||||||||||| Sbjct: 208 ttcccttagtagcggcgagcgaaatgggaacagcctaaaccg 249 Score = 85.7 bits (43), Expect = 1e-13 Identities = 55/59 (93%) Strand = Plus / Plus Query: 520 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 578 |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 629 ctgaccgcgtgcctgttgaagaatgagccggcgacttataaaaagtggcttggttaagg 687
>gb|L42984.1|ANKCPRGOL Ankistrodesmus stipitatus chloroplast large-subunit ribosomal RNA (rrnL), site-specific DNA endonuclease I-AstI gene Length = 4859 Score = 182 bits (92), Expect = 9e-43 Identities = 203/234 (86%), Gaps = 12/234 (5%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 |||||||||||||||||||||||||||||||||||||| || |||||||||| | ||||| Sbjct: 383 cccgagtagcatggggcacgtggaatcccgtgtgaatctgcgaggaccacctcgtaaggc 442 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaa-agaacc 450 ||||||||| | |||||||||||||||| |||||| |||| |||||| ||||| |||||| Sbjct: 443 taaatactcttaggtgaccgatagcgaaatagtacagtgatggaaagttgaaagagaacc 502 Query: 451 ccc-agtgggtagtgaaatagaacgtgaaaccg--tgctgagctcccaagcagtgggagg 507 ||| ||| ||||||||||||| |||||||| |||||| |||||||||||||| Sbjct: 503 cccttaaggggagtgaaatagaacatgaaaccgtatgctga-----caagcagtgggagg 557 Query: 508 ggaaagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcatagg 561 | ||| || |||||||||||||||||||||||||||||||||||| ||||| Sbjct: 558 gtttagt--tc-ctgaccgcgtgcctgttgaagaatgagccggcgacttatagg 608 Score = 109 bits (55), Expect = 1e-20 Identities = 79/87 (90%) Strand = Plus / Plus Query: 125 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 184 ||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||| Sbjct: 155 gcgaattgaaacatcttagtagctgaaggaaaagaaagcaaaagcgattcccaaagtagc 214 Query: 185 ggcgagcgaaatgggagcagcctaaac 211 |||||||| ||||||| |||||||||| Sbjct: 215 ggcgagcggaatgggaacagcctaaac 241
>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2568 Score = 182 bits (92), Expect = 9e-43 Identities = 137/152 (90%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 |||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||| | Sbjct: 371 cccgagtagcatggggcacgtgaaatcccgtgtgaatcaacgaggaccacctcgtaagac 430 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||| ||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 431 taaatactcctgagtgaccgatagtgaaacagtaccgtgagggaaaggtgaaaagaaccc 490 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgt 483 ||| ||| ||||||||||| | ||||||||| Sbjct: 491 ccataggggagtgaaatagatcatgaaaccgt 522 Score = 137 bits (69), Expect = 5e-29 Identities = 132/153 (86%) Strand = Plus / Plus Query: 61 attcccaaataggtcaaccttttaaactgcctgctgaatccatgagcaggcaagagacaa 120 |||||| |||||| ||||||| || ||| |||| ||||| ||| |||| ||||||||| Sbjct: 97 attcccgaatagggcaaccttatatacttcctgttgaattcatagacaggtaagagacaa 156 Query: 121 cctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtag 180 || |||||| |||||||||||||||||| | ||||||||||||||| ||||||||| ||| Sbjct: 157 cccggcgaattgaaacatcttagtagccggtggaaaagaaagcaaacgcgattcccttag 216 Query: 181 tagcggcgagcgaaatgggagcagcctaaaccg 213 ||| ||||||||||| |||| ||| |||||||| Sbjct: 217 tagtggcgagcgaaaagggatcagtctaaaccg 249 Score = 111 bits (56), Expect = 3e-21 Identities = 59/60 (98%) Strand = Plus / Plus Query: 519 tctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 578 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 556 tctgaccgcgtgcctgttgaagaatgagccggcgacttataggcagtggcttggttaagg 615
>gb|L49148.1|CRECPRGOLF Chlamydomonas mexicana chloroplast large subunit ribosomal RNA (rrnL) gene Length = 4181 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 452 ccagtgggtagtgaaatagaacgtgaaacc 481 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 520 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 578 |||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 582 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggttaagg 640 Score = 91.7 bits (46), Expect = 2e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 127 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 186 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 174 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 233 Query: 187 cgagcgaaatgggagcagcctaaacc 212 ||| |||| |||| |||||||||| Sbjct: 234 cgaacgaaccgggattagcctaaacc 259
>gb|DQ313084.1| Uncultured bacterium clone 3R3F 23S ribosomal RNA gene, partial sequence Length = 629 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 ||||||||||||||| |||| | |||||||||||||||||| |||||||||| | ||||| Sbjct: 243 cccgagtagcatgggacacgagaaatcccgtgtgaatcagcgaggaccacctcgtaaggc 302 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 ||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 303 taaatactcttaggtgaccgatagtgaagtagtaccgtgagggaaaggtgaaaagaaccc 362 Query: 452 ccagtgggtagtgaaatagaacgtgaaacc 481 | ||| ||||||||||||| ||||||| Sbjct: 363 ctgtaggggagtgaaatagaacatgaaacc 392 Score = 107 bits (54), Expect = 4e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 127 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 186 ||||||||||||||||||||| ||||| |||||||||| |||||||||| ||||| || Sbjct: 8 gaactgaaacatcttagtagctgaaggaagagaaagcaaacgcgattcccggagtagtgg 67 Query: 187 cgagcgaaatgggagcagcctaaacc 212 |||||||||||||| ||||||||||| Sbjct: 68 cgagcgaaatgggaacagcctaaacc 93 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 520 ctgaccgcgtgcctgttgaagaatgagccggcgact 555 |||||||||| |||||||||||||| |||||||||| Sbjct: 426 ctgaccgcgtacctgttgaagaatgggccggcgact 461
>emb|X68910.1|CHCMRRNL1 Chloroplast Chlamydomonas mexicana rrnL gene, exon 1 Length = 1965 Score = 178 bits (90), Expect = 1e-41 Identities = 135/150 (90%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 ||||||||| |||||||||||| |||||||| |||||| || |||||||||| | ||||| Sbjct: 398 cccgagtagtatggggcacgtgaaatcccgtatgaatctgcgaggaccacctcgtaaggc 457 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||| Sbjct: 458 taaatactcctgagtgaccgatagcgaaatagtaccgcgagggaaaggtgaaaagaaccc 517 Query: 452 ccagtgggtagtgaaatagaacgtgaaacc 481 | |||| ||||||||||||| ||||||| Sbjct: 518 ctgttggggagtgaaatagaacatgaaacc 547 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 520 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 578 |||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 582 ctgaccgcgtgcctgttgaagaatgagccggcgacttataggaagtggctgggttaagg 640 Score = 91.7 bits (46), Expect = 2e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 127 gaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcgg 186 |||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| || Sbjct: 174 gaactgaaacatctaagtagctggaggaaaagaaagcaaacgcgattcccgtagtagtgg 233 Query: 187 cgagcgaaatgggagcagcctaaacc 212 ||| |||| |||| |||||||||| Sbjct: 234 cgaacgaaccgggattagcctaaacc 259
>gb|M36158.1|CHLCPG C.ellipsoidea chloroplast 23S ribosomal RNA gene, complete sequence Length = 3359 Score = 178 bits (90), Expect = 1e-41 Identities = 210/246 (85%), Gaps = 8/246 (3%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 |||||||||| |||||||||| |||||||||||||| ||| |||||||||| | ||||| Sbjct: 498 cccgagtagctaggggcacgtgaaatcccgtgtgaatgagcgaggaccacctcgtaaggc 557 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 ||||||||||| |||||||||||| ||| |||||||| |||||||||||||||| | || Sbjct: 558 taaatactcctaggtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaaagaacc 617 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgtgctgagctcccaagcagtgggaggg-ga 510 | ||| ||||||| ||||| |||||||| | |||| ||||||||||||||| || Sbjct: 618 ctgtaggggagtgaaacagaacatgaaaccg---taagctgtcaagcagtgggagggcga 674 Query: 511 aagtgatctctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggctt 570 || | | |||||||||||||||||||||||||||||||||||| ||||| |||||| | Sbjct: 675 aa---agc-ctgaccgcgtgcctgttgaagaatgagccggcgacttatagggagtggcgt 730 Query: 571 ggttaa 576 |||||| Sbjct: 731 ggttaa 736 Score = 97.6 bits (49), Expect = 4e-17 Identities = 73/81 (90%) Strand = Plus / Plus Query: 132 gaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggcgagc 191 |||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||||| Sbjct: 280 gaaacatcttagtagctggaggaaaagaaagcaaacgcgattcccttagtagcggcgagc 339 Query: 192 gaaatgggagcagcctaaacc 212 ||||| | ||||||||||| Sbjct: 340 gaaatcccaacagcctaaacc 360
>gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA gene, partial sequence Length = 2451 Score = 176 bits (89), Expect = 5e-41 Identities = 134/149 (89%) Strand = Plus / Plus Query: 335 gagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggctaa 394 ||||||||||||||| ||| |||||| ||||||||||| || |||| || | |||||||| Sbjct: 1 gagtagcatggggcaggtgaaatcccatgtgaatcagcgagaaccatctcgtaaggctaa 60 Query: 395 atactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccccca 454 ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 61 atactcctgtgtgaccgatagcgaagtagtaccgcgagggaaaggtgaaaagaaccccga 120 Query: 455 gtgggtagtgaaatagaacgtgaaaccgt 483 ||| ||||||||||||| ||||||||| Sbjct: 121 aaggggagtgaaatagaacatgaaaccgt 149 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 519 tctgaccgcgtgcctgttgaagaatgagccggcga 553 |||||||| |||||||||||||||||||||||||| Sbjct: 182 tctgaccgtgtgcctgttgaagaatgagccggcga 216
>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA (rrnL) gene Length = 7514 Score = 176 bits (89), Expect = 5e-41 Identities = 138/153 (90%), Gaps = 1/153 (0%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 |||||||||||||||||||||| ||||||||||||||| | |||||||||| | ||||| Sbjct: 527 cccgagtagcatggggcacgtgaaatcccgtgtgaatccacgaggaccacctcgtaaggc 586 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 |||||||||||||||||||||||| ||| |||||||| |||||||||||||||| | || Sbjct: 587 taaatactcctgggtgaccgatagtgaaatagtaccgcgagggaaaggtgaaaaagaacc 646 Query: 452 ccagt-gggtagtgaaatagaacgtgaaaccgt 483 ||||| ||| ||||||||||||| ||||||||| Sbjct: 647 ccagtcggggagtgaaatagaacatgaaaccgt 679 Score = 147 bits (74), Expect = 5e-32 Identities = 95/102 (93%) Strand = Plus / Plus Query: 112 aagagacaacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcga 171 ||||||||||| || ||| |||||||||||||||||| ||||||||||||||||| |||| Sbjct: 148 aagagacaacccggtgaattgaaacatcttagtagccggaggaaaagaaagcaaacgcga 207 Query: 172 ttcccgtagtagcggcgagcgaaatgggagcagcctaaaccg 213 ||||||||||||||||||||||| ||||| |||||||||||| Sbjct: 208 ttcccgtagtagcggcgagcgaactgggaacagcctaaaccg 249 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Plus Query: 521 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggcttggttaagg 578 ||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||| Sbjct: 714 tgaccgcatgcctgttgaagaatgagccggcgacttataaagagtggcttggttaagg 771
>gb|DQ313038.1| Uncultured bacterium clone 3P8C 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgtg 484 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 125 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 184 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 185 ggcgagcgaaatgggagcagcctaaacc 212 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 521 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 561 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ313003.1| Uncultured bacterium clone 3O5G 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgtg 484 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 125 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 184 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 185 ggcgagcgaaatgggagcagcctaaacc 212 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 521 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 561 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ312972.1| Uncultured bacterium clone 3N4D 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgtg 484 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 73.8 bits (37), Expect = 6e-10 Identities = 73/85 (85%) Strand = Plus / Plus Query: 128 aactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagcggc 187 |||||||||||||||||||| ||||||| ||||| |||| ||| |||| ||||||||| Sbjct: 22 aactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagcggc 81 Query: 188 gagcgaaatgggagcagcctaaacc 212 ||||||| |||| |||||||||| Sbjct: 82 gagcgaacggggaagagcctaaacc 106 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 521 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 568 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312883.1| Uncultured bacterium clone 3K4C 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgtg 484 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 125 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 184 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 185 ggcgagcgaaatgggagcagcctaaacc 212 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 521 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 568 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312801.1| Uncultured bacterium clone 3H5F 23S ribosomal RNA gene, partial sequence Length = 793 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 219 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 278 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 279 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 338 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgtg 484 | | ||| ||||||||||||| |||||||||| Sbjct: 339 cgggaggggagtgaaatagaacatgaaaccgtg 371 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 125 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 184 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 6 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 65 Query: 185 ggcgagcgaaatgggagcagcctaaacc 212 |||||||||| |||| |||||||||| Sbjct: 66 ggcgagcgaacggggaagagcctaaacc 93 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 521 tgaccgcgtgcctgttgaagaatgagccggcgactcatagg 561 |||||| |||||||||||||||||||||||||||| ||||| Sbjct: 405 tgaccgtgtgcctgttgaagaatgagccggcgacttatagg 445
>gb|DQ312666.1| Uncultured bacterium clone 3D4G 23S ribosomal RNA gene, partial sequence Length = 806 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgtg 484 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 125 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 184 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 185 ggcgagcgaaatgggagcagcctaaacc 212 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 521 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 568 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312593.1| Uncultured bacterium clone 3B8B 23S ribosomal RNA gene, partial sequence Length = 723 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgtg 484 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 125 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 184 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 185 ggcgagcgaaatgggagcagcctaaacc 212 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 521 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 568 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|DQ312550.1| Uncultured bacterium clone 3B11D 23S ribosomal RNA gene, partial sequence Length = 806 Score = 176 bits (89), Expect = 5e-41 Identities = 137/153 (89%) Strand = Plus / Plus Query: 332 cccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaaggc 391 ||||||||||| || ||||||||||| |||||||||||||| |||||||||| | ||||| Sbjct: 232 cccgagtagcacggagcacgtggaattccgtgtgaatcagcgaggaccacctcgtaaggc 291 Query: 392 taaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaaccc 451 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||| Sbjct: 292 taagtactcctgtgtgaccgatagcgaaacagtaccgcgagggaaaggtgaaaagaaccc 351 Query: 452 ccagtgggtagtgaaatagaacgtgaaaccgtg 484 | | ||| ||||||||||||| |||||||||| Sbjct: 352 cgggaggggagtgaaatagaacatgaaaccgtg 384 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Plus Query: 125 gcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccgtagtagc 184 ||||||||||||||||||||||| ||||||| ||||| |||| ||| |||| |||||| Sbjct: 19 gcgaactgaaacatcttagtagctggaggaaaggaaagtaaaaacgactccctaagtagc 78 Query: 185 ggcgagcgaaatgggagcagcctaaacc 212 |||||||||| |||| |||||||||| Sbjct: 79 ggcgagcgaacggggaagagcctaaacc 106 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 521 tgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 568 |||||| |||||||||||||||||||||||||||| ||||||| |||| Sbjct: 418 tgaccgtgtgcctgttgaagaatgagccggcgacttataggcactggc 465
>gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribosomal RNA gene, complete sequence; chloroplast gene for chloroplast product Length = 2604 Score = 176 bits (89), Expect = 5e-41 Identities = 113/121 (93%) Strand = Plus / Plus Query: 331 acccgagtagcatggggcacgtggaatcccgtgtgaatcagcaaggaccaccttgcaagg 390 ||||||||||||||||||||||| ||||||||||||||| || |||||||||| | |||| Sbjct: 365 acccgagtagcatggggcacgtgaaatcccgtgtgaatctgcgaggaccacctcgtaagg 424 Query: 391 ctaaatactcctgggtgaccgatagcgaagtagtaccgtgagggaaaggtgaaaagaacc 450 |||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 425 ctaaatactcctggatgaccgatagcgaactagtaccgtgagggaagggtgaaaagaacc 484 Query: 451 c 451 | Sbjct: 485 c 485 Score = 135 bits (68), Expect = 2e-28 Identities = 89/96 (92%) Strand = Plus / Plus Query: 118 caacctggcgaactgaaacatcttagtagccagaggaaaagaaagcaaaagcgattcccg 177 |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 150 caacctggcgaactgaaacatcttagtagccagaggaagagaaagcaaacgcgattcccc 209 Query: 178 tagtagcggcgagcgaaatgggagcagcctaaaccg 213 |||||||||||||||| |||| |||||||||||| Sbjct: 210 cagtagcggcgagcgaagagggaacagcctaaaccg 245 Score = 89.7 bits (45), Expect = 1e-14 Identities = 48/49 (97%) Strand = Plus / Plus Query: 520 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcagtggc 568 ||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 551 ctgaccgcgtgcctgttgaagaatgagccggcgactcataggcggtggc 599 Score = 44.1 bits (22), Expect = 0.51 Identities = 43/50 (86%) Strand = Plus / Plus Query: 254 gctaggcgaagcggttgagtgccgcaccctagatggctaaagtccagtag 303 ||||| |||||||||||||| ||||||| |||||| | |||||||||| Sbjct: 287 gctagacgaagcggttgagttccgcaccgcagatggtgagagtccagtag 336 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,977,299 Number of Sequences: 3902068 Number of extensions: 3977299 Number of successful extensions: 118738 Number of sequences better than 10.0: 26586 Number of HSP's better than 10.0 without gapping: 26414 Number of HSP's successfully gapped in prelim test: 207 Number of HSP's that attempted gapping in prelim test: 74882 Number of HSP's gapped (non-prelim): 41595 length of query: 585 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 562 effective length of database: 17,143,297,704 effective search space: 9634533309648 effective search space used: 9634533309648 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
