ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd24f03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1RF2A_ORYSA (Q69IL4) Transcription factor RF2a 50 3e-06
2POF21_ARATH (Q04088) Probable transcription factor PosF21 (AtbZI... 48 1e-05
3RF2B_ORYSA (Q6S4P4) Transcription factor RF2b 46 5e-05
4ZHANG_HUMAN (Q9NS37) Host cell factor-binding transcription fact... 34 0.20
5HBP1A_WHEAT (P23922) Transcription factor HBP-1a (Histone-specif... 33 0.44
6XBP1_HUMAN (P17861) X box-binding protein 1 (XBP-1) (Tax-respons... 33 0.44
7ZHANG_MOUSE (Q91ZR3) Host cell factor-binding transcription fact... 33 0.44
8EMBP1_WHEAT (P25032) DNA-binding protein EMBP-1 (Histone promote... 33 0.44
9CREB3_HUMAN (O43889) Cyclic AMP-responsive element-binding prote... 32 0.74
10CREB3_BOVIN (Q8SQ19) Cyclic AMP-responsive element-binding prote... 32 0.74
11FCR3_CANAL (Q8X229) Fluconazole resistance protein 3 32 0.97
12XBP1_RAT (Q9R1S4) X box-binding protein 1 (Hepatocarcinogenesis-... 32 0.97
13S39A4_MOUSE (Q78IQ7) Zinc transporter ZIP4 precursor (Solute car... 31 1.3
14XBP1_MOUSE (O35426) X box-binding protein 1 (XBP-1) (Tax-respons... 31 1.7
15CREB3_MOUSE (Q61817) Cyclic AMP-responsive element-binding prote... 31 1.7
16WRK34_ARATH (O65590) Probable WRKY transcription factor 34 (WRKY... 30 3.7
17CPRF1_PETCR (Q99089) Common plant regulatory factor CPRF-1 29 4.8
18BACH1_MOUSE (P97302) Transcription regulator protein BACH1 (BTB ... 29 4.8
19BACH1_HUMAN (O14867) Transcription regulator protein BACH1 (BTB ... 29 4.8
20PROP1_GORGO (Q3LU39) Homeobox protein prophet of Pit-1 (PROP-1) ... 29 4.8
21HS101_ORYSA (Q6F2Y7) Heat shock protein 101 29 4.8
22MYSP_BLOTA (Q8MUF6) Paramyosin (Allergen Blo t 11) 29 6.3
23CPRF2_PETCR (Q99090) Light-inducible protein CPRF-2 29 6.3
24MAF_HUMAN (O75444) Transcription factor Maf (Proto-oncogene c-maf) 29 6.3
25UNC33_CAEEL (Q01630) Uncoordinated protein 33 (Protein unc-33) 29 6.3
26HSCA_PSEPK (Q88PK4) Chaperone protein hscA homolog 28 8.2
27CJ084_PONPY (Q5R939) Protein C10orf84 homolog 28 8.2
28CJ084_HUMAN (Q9H8W3) Protein C10orf84 28 8.2
29SYD_COREF (Q8FT19) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspar... 28 8.2
30OP2_MAIZE (P12959) Regulatory protein opaque-2 28 8.2
31SYD_MYCPA (Q741M7) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspar... 28 8.2

>RF2A_ORYSA (Q69IL4) Transcription factor RF2a|
          Length = 380

 Score = 49.7 bits (117), Expect = 3e-06
 Identities = 27/58 (46%), Positives = 36/58 (62%)
 Frame = +1

Query: 280 AKQQYAQRSRVRKLQYIAELESXVQALQTQGVEVSAEMDXLGQQNIMLDLENKSLKQR 453
           A +Q A RS+ RK++YIAELE  VQ LQT+   +SA++  L +    L  EN  LK R
Sbjct: 190 ANRQSAARSKERKMRYIAELERKVQTLQTEATTLSAQLALLQRDTSGLTTENSELKLR 247



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>POF21_ARATH (Q04088) Probable transcription factor PosF21 (AtbZIP59)|
          Length = 398

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 36/103 (34%), Positives = 49/103 (47%), Gaps = 13/103 (12%)
 Frame = +1

Query: 184 GDASHNHIMXGATRNDSDEHLKHSQSEA--------DTKCAKQ-----QYAQRSRVRKLQ 324
           G  + N ++     +DS    K S S          D K AK+     Q A RS+ RK +
Sbjct: 165 GSMNINEMLMSGNEDDSAIDAKKSMSATKLAELALIDPKRAKRIWANRQSAARSKERKTR 224

Query: 325 YIAELESXVQALQTQGVEVSAEMDXLGQQNIMLDLENKSLKQR 453
           YI ELE  VQ LQT+   +SA++  L +    L +EN  LK R
Sbjct: 225 YIFELERKVQTLQTEATTLSAQLTLLQRDTNGLTVENNELKLR 267



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>RF2B_ORYSA (Q6S4P4) Transcription factor RF2b|
          Length = 329

 Score = 45.8 bits (107), Expect = 5e-05
 Identities = 25/58 (43%), Positives = 33/58 (56%)
 Frame = +1

Query: 280 AKQQYAQRSRVRKLQYIAELESXVQALQTQGVEVSAEMDXLGQQNIMLDLENKSLKQR 453
           A +Q A RS+ RK +YI ELE  VQ LQT+   +SA++    +    L  EN  LK R
Sbjct: 141 ANRQSAARSKERKARYITELERKVQTLQTEATTLSAQLTLFQRDTTGLSAENAELKIR 198



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>ZHANG_HUMAN (Q9NS37) Host cell factor-binding transcription factor Zhangfei|
           (HCF-binding transcription factor Zhangfei)
          Length = 272

 Score = 33.9 bits (76), Expect = 0.20
 Identities = 22/78 (28%), Positives = 41/78 (52%)
 Frame = +1

Query: 214 GATRNDSDEHLKHSQSEADTKCAKQQYAQRSRVRKLQYIAELESXVQALQTQGVEVSAEM 393
           G + ND+++    S  +A    A+      +R++K +Y+  LES V+ L  +  E+ AE 
Sbjct: 114 GGSGNDNNQAATKSPRKAAAAAARL-----NRLKKKEYVMGLESRVRGLAAENQELRAEN 168

Query: 394 DXLGQQNIMLDLENKSLK 447
             LG++   L  E++ L+
Sbjct: 169 RELGKRVQALQEESRYLR 186



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>HBP1A_WHEAT (P23922) Transcription factor HBP-1a (Histone-specific|
           transcription factor HBP1)
          Length = 349

 Score = 32.7 bits (73), Expect = 0.44
 Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
 Frame = +1

Query: 190 ASHNHIMXGATRNDS-DEHLKHSQSEADTKCAKQQYAQRSRVRKLQYIAELESXVQALQT 366
           A    +  G+ R +  DE     Q     K + ++ A+RSR+RK     EL    +AL++
Sbjct: 233 AMRGKVPSGSARGEQWDERELKKQKR---KLSNRESARRSRLRKQAECEELGQRAEALKS 289

Query: 367 QGVEVSAEMDXLGQQNIMLDLENKSLKQR 453
           +   +  E+D + ++   L  +N SLK +
Sbjct: 290 ENSSLRIELDRIKKEYEELLSKNTSLKAK 318



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>XBP1_HUMAN (P17861) X box-binding protein 1 (XBP-1) (Tax-responsive|
           element-binding protein 5)
          Length = 261

 Score = 32.7 bits (73), Expect = 0.44
 Identities = 21/71 (29%), Positives = 35/71 (49%)
 Frame = +1

Query: 241 HLKHSQSEADTKCAKQQYAQRSRVRKLQYIAELESXVQALQTQGVEVSAEMDXLGQQNIM 420
           HL   +     K   +  AQ +R RK   ++ELE  V  L+ +  ++  E   L ++   
Sbjct: 66  HLSPEEKALRRKLKNRVAAQTARDRKKARMSELEQQVVDLEEENQKLLLENQLLREKTHG 125

Query: 421 LDLENKSLKQR 453
           L +EN+ L+QR
Sbjct: 126 LVVENQELRQR 136



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>ZHANG_MOUSE (Q91ZR3) Host cell factor-binding transcription factor Zhangfei|
           (HCF-binding transcription factor Zhangfei) (Tyrosine
           kinase-associated leucine zipper protein LAZip)
          Length = 273

 Score = 32.7 bits (73), Expect = 0.44
 Identities = 22/78 (28%), Positives = 39/78 (50%)
 Frame = +1

Query: 214 GATRNDSDEHLKHSQSEADTKCAKQQYAQRSRVRKLQYIAELESXVQALQTQGVEVSAEM 393
           G   ND ++    S  +A    A+      +R++K +Y+  LES V+ L  +  E+ AE 
Sbjct: 115 GGGANDGNQAATKSPRKAAAAAARL-----NRLKKKEYVMGLESRVRGLAAENQELRAEN 169

Query: 394 DXLGQQNIMLDLENKSLK 447
             LG++   L  E++ L+
Sbjct: 170 RELGKRVQALQEESRYLR 187



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>EMBP1_WHEAT (P25032) DNA-binding protein EMBP-1 (Histone promoter-binding|
           protein 1a(1)) (HBP-1a(1))
          Length = 354

 Score = 32.7 bits (73), Expect = 0.44
 Identities = 19/57 (33%), Positives = 30/57 (52%)
 Frame = +1

Query: 274 KCAKQQYAQRSRVRKLQYIAELESXVQALQTQGVEVSAEMDXLGQQNIMLDLENKSL 444
           K + ++ A+RSR+RK Q   EL   V  L      + +E+D L +    ++ ENK L
Sbjct: 257 KQSNRESARRSRLRKQQECEELAQKVSELTAANGTLRSELDQLKKDCKTMETENKKL 313



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>CREB3_HUMAN (O43889) Cyclic AMP-responsive element-binding protein 3 (Luman|
           protein) (Transcription factor LZIP-alpha)
          Length = 395

 Score = 32.0 bits (71), Expect = 0.74
 Identities = 17/50 (34%), Positives = 27/50 (54%)
 Frame = +1

Query: 274 KCAKQQYAQRSRVRKLQYIAELESXVQALQTQGVEVSAEMDXLGQQNIML 423
           K   ++ AQ SR +K  Y+  LES V     Q +E+  ++  L +QN+ L
Sbjct: 181 KIRNKRSAQESRRKKKVYVGGLESRVLKYTAQNMELQNKVQLLEEQNLSL 230



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>CREB3_BOVIN (Q8SQ19) Cyclic AMP-responsive element-binding protein 3 (Luman|
           protein)
          Length = 368

 Score = 32.0 bits (71), Expect = 0.74
 Identities = 17/50 (34%), Positives = 27/50 (54%)
 Frame = +1

Query: 274 KCAKQQYAQRSRVRKLQYIAELESXVQALQTQGVEVSAEMDXLGQQNIML 423
           K   ++ AQ SR +K  Y+  LES V     Q +E+  ++  L +QN+ L
Sbjct: 160 KIRNKKSAQESRRKKKVYVGGLESRVLKYTAQNLELQNKVQLLEEQNLSL 209



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>FCR3_CANAL (Q8X229) Fluconazole resistance protein 3|
          Length = 399

 Score = 31.6 bits (70), Expect = 0.97
 Identities = 22/72 (30%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
 Frame = +1

Query: 235 DEHLKHSQSEADTKCAKQQYAQRS-RVRKLQYIAELESXVQALQTQGVEVSAEMDXLGQQ 411
           D  L   + +   K A+ + AQR+ R RK   + ELE+ + A + +  ++  E++ + +Q
Sbjct: 204 DSELTEEELQMKRK-AQNRAAQRAFRERKESKLKELEAKLLASEEERQKLLDELEQIKKQ 262

Query: 412 NIMLDLENKSLK 447
           NI +  EN+ LK
Sbjct: 263 NISIATENEILK 274



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>XBP1_RAT (Q9R1S4) X box-binding protein 1 (Hepatocarcinogenesis-related|
           transcription factor) (HTF)
          Length = 267

 Score = 31.6 bits (70), Expect = 0.97
 Identities = 20/71 (28%), Positives = 34/71 (47%)
 Frame = +1

Query: 241 HLKHSQSEADTKCAKQQYAQRSRVRKLQYIAELESXVQALQTQGVEVSAEMDXLGQQNIM 420
           HL   +     K   +  AQ +R RK   ++ELE  V  L+ +  ++  E   L ++   
Sbjct: 59  HLSPEEKALRRKLKNRVAAQTARDRKKARMSELEQQVVDLEEENQKLQLENQLLREKTHG 118

Query: 421 LDLENKSLKQR 453
           L +EN+ L+ R
Sbjct: 119 LVIENQELRTR 129



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>S39A4_MOUSE (Q78IQ7) Zinc transporter ZIP4 precursor (Solute carrier family 39|
           member 4) (Activated in W/Wv mouse stomach 2) (mAWMS2)
          Length = 660

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 6/83 (7%)
 Frame = +1

Query: 49  GIPDRMFLQDGVIPLPVRDSMPLPVREKNGGHHGAMLNGADMKGYGD----ASHNHIMXG 216
           G+P   +  D V  L   D   + + E     H   + G D   + D    A H+H    
Sbjct: 198 GLPSPQYFVDFVFRLHSSDPPNITLHELENLMHHLGVGGEDHSDHDDHGDHADHSHPDRK 257

Query: 217 ATRNDSDEHLKHSQSEA--DTKC 279
           A+  DS+ H  H+ + +  DT C
Sbjct: 258 ASHQDSELHTPHNSNSSVWDTLC 280



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>XBP1_MOUSE (O35426) X box-binding protein 1 (XBP-1) (Tax-responsive|
           element-binding protein 5 homolog)
          Length = 267

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 20/71 (28%), Positives = 34/71 (47%)
 Frame = +1

Query: 241 HLKHSQSEADTKCAKQQYAQRSRVRKLQYIAELESXVQALQTQGVEVSAEMDXLGQQNIM 420
           HL   +     K   +  AQ +R RK   ++ELE  V  L+ +  ++  E   L ++   
Sbjct: 59  HLSPEEKALRRKLKNRVAAQTARDRKKARMSELEQQVVDLEEENHKLQLENQLLREKTHG 118

Query: 421 LDLENKSLKQR 453
           L +EN+ L+ R
Sbjct: 119 LVVENQELRTR 129



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>CREB3_MOUSE (Q61817) Cyclic AMP-responsive element-binding protein 3|
           (Transcription factor LZIP)
          Length = 404

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 17/50 (34%), Positives = 26/50 (52%)
 Frame = +1

Query: 274 KCAKQQYAQRSRVRKLQYIAELESXVQALQTQGVEVSAEMDXLGQQNIML 423
           K   ++ AQ SR +K  Y+  LES V     Q  E+  ++  L +QN+ L
Sbjct: 192 KIRNKRAAQESRKKKKVYVVGLESRVLKYTAQNRELQNKVQRLEEQNLSL 241



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>WRK34_ARATH (O65590) Probable WRKY transcription factor 34 (WRKY DNA-binding|
           protein 34)
          Length = 568

 Score = 29.6 bits (65), Expect = 3.7
 Identities = 26/98 (26%), Positives = 42/98 (42%), Gaps = 3/98 (3%)
 Frame = +1

Query: 112 PLPVREKNGGHHGAML--NGADMKGYGDASHNHIMXGATRNDSDEHLKHSQSEADTKCAK 285
           P+    + G H G+M   NG    GYGDA+ + +      +D   H+  S +  D +  +
Sbjct: 275 PVSAELEYGSHSGSMQVQNGTHQFGYGDAAADALYRDENEDDRTSHMSVSLT-YDGEVEE 333

Query: 286 QQYAQRSRVRKLQ-YIAELESXVQALQTQGVEVSAEMD 396
            +    S+ RKL+ Y  E     +A +   V V    D
Sbjct: 334 SE----SKRRKLEAYATETSGSTRASREPRVVVQTTSD 367



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>CPRF1_PETCR (Q99089) Common plant regulatory factor CPRF-1|
          Length = 411

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 18/59 (30%), Positives = 29/59 (49%)
 Frame = +1

Query: 226 NDSDEHLKHSQSEADTKCAKQQYAQRSRVRKLQYIAELESXVQALQTQGVEVSAEMDXL 402
           NDS  H          K + ++ A+RSR+RK     EL   V +L  + + + AE++ L
Sbjct: 260 NDSWLHNDRDLKRERRKQSNRESARRSRLRKQAEAEELAIKVDSLTAENMALKAEINRL 318



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>BACH1_MOUSE (P97302) Transcription regulator protein BACH1 (BTB and CNC homolog|
           1)
          Length = 739

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = +1

Query: 295 AQRSRVRKLQYIAELESXVQALQTQGVEVSAEMDXL 402
           AQR R RKL  I  LES ++ LQ++   +  E D +
Sbjct: 574 AQRCRKRKLDCIQNLESEIEKLQSEKESLLKERDHI 609



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>BACH1_HUMAN (O14867) Transcription regulator protein BACH1 (BTB and CNC homolog|
           1) (HA2303)
          Length = 736

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = +1

Query: 295 AQRSRVRKLQYIAELESXVQALQTQGVEVSAEMDXL 402
           AQR R RKL  I  LES ++ LQ++   +  E D +
Sbjct: 571 AQRCRKRKLDCIQNLESEIEKLQSEKESLLKERDHI 606



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>PROP1_GORGO (Q3LU39) Homeobox protein prophet of Pit-1 (PROP-1)|
           (Pituitary-specific homeodomain factor)
          Length = 225

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 15/50 (30%), Positives = 20/50 (40%), Gaps = 3/50 (6%)
 Frame = -1

Query: 168 CPIQHGTMVPTILLPHWQRHAIPHRKWND---TILQEHSVWDPTAVPAPA 28
           CP  +    P    PH   HA+P +        +  +   W PT  PAPA
Sbjct: 153 CPYSYAPPPPVTCFPHPYSHALPSQPSTGGAFALSHQSEDWYPTLHPAPA 202



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>HS101_ORYSA (Q6F2Y7) Heat shock protein 101|
          Length = 912

 Score = 29.3 bits (64), Expect = 4.8
 Identities = 31/139 (22%), Positives = 65/139 (46%), Gaps = 7/139 (5%)
 Frame = +1

Query: 58  DRMFLQDGVIPLPVRDSMPL--PVREKNGGHHGAMLNGADMKGYGDASHNHIMXGATRND 231
           +R F Q  V    V D++ +   ++EK  GHHG  +    +      S  +IM     + 
Sbjct: 333 ERRFQQVFVAEPSVPDTISILRGLKEKYEGHHGVRIQDRALVVAAQLSARYIMGRHLPDK 392

Query: 232 S----DEHLKHSQSEADTKCAKQQYAQRSRVR-KLQYIAELESXVQALQTQGVEVSAEMD 396
           +    DE   + + + D++  +    +R R++ ++++ A  +   +A + + VEV  E+D
Sbjct: 393 AIDLVDEACANVRVQLDSQPEEIDNLERKRIQLEVEHHALEKEKDKASKARLVEVKKELD 452

Query: 397 XLGQQNIMLDLENKSLKQR 453
            L  +   L ++ +  K+R
Sbjct: 453 DLRDKLQPLTMKYRKEKER 471



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>MYSP_BLOTA (Q8MUF6) Paramyosin (Allergen Blo t 11)|
          Length = 875

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
 Frame = +1

Query: 223 RNDSDEHLKHSQSEADTKCAKQQYAQRSR------VRKLQY-IAELESXVQALQTQGVEV 381
           +N SD+  +  Q+E     A+ + A + +      V KL+Y + EL   ++ +    VEV
Sbjct: 138 KNKSDKEKQKFQAEVFELLAQVETANKDKLVAQKTVEKLEYTVHELNIKIEEINRTVVEV 197

Query: 382 SAEMDXLGQQN 414
           +A    L Q+N
Sbjct: 198 TAHRQRLSQEN 208



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>CPRF2_PETCR (Q99090) Light-inducible protein CPRF-2|
          Length = 401

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 15/56 (26%), Positives = 31/56 (55%)
 Frame = +1

Query: 280 AKQQYAQRSRVRKLQYIAELESXVQALQTQGVEVSAEMDXLGQQNIMLDLENKSLK 447
           + ++ A+RSR RK  ++ ELE+ V  L+ +   +   +  + Q+     ++N+ LK
Sbjct: 207 SNRESARRSRRRKQAHMTELETQVSQLRVENSSLLKRLTDISQRYNDAAVDNRVLK 262



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>MAF_HUMAN (O75444) Transcription factor Maf (Proto-oncogene c-maf)|
          Length = 403

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 25/111 (22%), Positives = 43/111 (38%)
 Frame = +1

Query: 118 PVREKNGGHHGAMLNGADMKGYGDASHNHIMXGATRNDSDEHLKHSQSEADTKCAKQQYA 297
           P     GG  G    G    G G A H H   G    D     + S  +  T   ++   
Sbjct: 221 PASAGGGGGGGGGGGGGGAAGAGGALHPHHAAGGLHFDD----RFSDEQLVTMSVRELNR 276

Query: 298 QRSRVRKLQYIAELESXVQALQTQGVEVSAEMDXLGQQNIMLDLENKSLKQ 450
           Q   V K + +  L+   + L+ +G   S     + Q++++   +N+ L+Q
Sbjct: 277 QLRGVSK-EEVIRLKQKRRTLKNRGYAQSCRFKRVQQRHVLESEKNQLLQQ 326



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>UNC33_CAEEL (Q01630) Uncoordinated protein 33 (Protein unc-33)|
          Length = 854

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = +1

Query: 88  PLPVRDSMPLPVREKNGG 141
           P+PV+D++P P R KN G
Sbjct: 104 PIPVKDAIPAPARHKNKG 121



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>HSCA_PSEPK (Q88PK4) Chaperone protein hscA homolog|
          Length = 620

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = -3

Query: 397 NPFQLKLLPLVSVRLELCSRALQCTGASGHETSEHIAVWRIWCLPLTESALG 242
           N F+  + PLV+  L+ C RA++ +G    E S  + V     +P    A+G
Sbjct: 298 NAFEAMIEPLVARSLKACRRAVRDSGVELEEVSAVVMVGGSTRVPRVREAVG 349



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>CJ084_PONPY (Q5R939) Protein C10orf84 homolog|
          Length = 233

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 16/48 (33%), Positives = 27/48 (56%)
 Frame = +1

Query: 241 HLKHSQSEADTKCAKQQYAQRSRVRKLQYIAELESXVQALQTQGVEVS 384
           H KHS+ ++ T   + +  +RSR  KL+   EL S   + +TQ  E++
Sbjct: 84  HKKHSEQKSTTSRFRGKRRKRSRKDKLKNEKELHSEPSSNETQWKELT 131



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>CJ084_HUMAN (Q9H8W3) Protein C10orf84|
          Length = 233

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 16/48 (33%), Positives = 27/48 (56%)
 Frame = +1

Query: 241 HLKHSQSEADTKCAKQQYAQRSRVRKLQYIAELESXVQALQTQGVEVS 384
           H KHS+ ++ T   + +  +RSR  KL+   EL S   + +TQ  E++
Sbjct: 84  HKKHSEQKSTTSRFRGKRRKRSRKDKLKNEKELHSEPSSNETQWKELT 131



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>SYD_COREF (Q8FT19) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA|
           ligase) (AspRS)
          Length = 600

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 20/74 (27%), Positives = 31/74 (41%)
 Frame = +1

Query: 10  WLIWAARRGRDRSGIPDRMFLQDGVIPLPVRDSMPLPVREKNGGHHGAMLNGADMKGYGD 189
           W  WA +RG    G+   +  +DG +  PV  ++    RE    H GA          GD
Sbjct: 335 WQEWAKQRGA--KGLAYILVGEDGELGGPVAKNITDAEREGIAAHVGAEPGDCIFFAAGD 392

Query: 190 ASHNHIMXGATRND 231
              +  + GA R++
Sbjct: 393 TRSSRALLGAARDE 406



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>OP2_MAIZE (P12959) Regulatory protein opaque-2|
          Length = 453

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 16/58 (27%), Positives = 32/58 (55%)
 Frame = +1

Query: 274 KCAKQQYAQRSRVRKLQYIAELESXVQALQTQGVEVSAEMDXLGQQNIMLDLENKSLK 447
           K + ++ A+RSR RK  ++ ELE  V  L+ +   +   +  L Q+    +++N+ L+
Sbjct: 232 KESNRESARRSRYRKAAHLKELEDQVAQLKAENSCLLRRIAALNQKYNDANVDNRVLR 289



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>SYD_MYCPA (Q741M7) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA|
           ligase) (AspRS)
          Length = 591

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 20/74 (27%), Positives = 31/74 (41%)
 Frame = +1

Query: 10  WLIWAARRGRDRSGIPDRMFLQDGVIPLPVRDSMPLPVREKNGGHHGAMLNGADMKGYGD 189
           W  WA +RG    G+   +  +DG +  PV  ++    R    GH GA          G 
Sbjct: 330 WQEWAKQRGA--KGLAYVLVGEDGELGGPVAKNLSEAERAGLAGHVGAAPGDCIFFAAGP 387

Query: 190 ASHNHIMXGATRND 231
           A  +  + GA R++
Sbjct: 388 AKPSRALLGAARSE 401


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.316    0.132    0.385 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,678,552
Number of Sequences: 219361
Number of extensions: 1230697
Number of successful extensions: 3649
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 3534
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3647
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2793557952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
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