ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd24f03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY105123.1| Zea mays PCO091259 mRNA sequence 168 1e-38
2gb|BT024110.1| Zea mays clone EL01N0515D05 mRNA sequence 153 6e-34
3gb|AY108212.1| Zea mays PCO110549 mRNA sequence 153 6e-34
4dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 98 3e-17
5emb|AL713953.3|CNS07YPY Oryza sativa chromosome 12, . BAC OJ1134... 98 3e-17
6gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 98 3e-17
7emb|BX536967.2|CNS09SBH Oryza sativa chromosome 12, . BAC OSJNBa... 98 3e-17
8dbj|AK072267.1| Oryza sativa (japonica cultivar-group) cDNA clon... 96 1e-16
9gb|AC123517.2| Oryza sativa japonica cultivar-group chromosome 1... 58 3e-05
10gb|AC137989.2| Oryza sativa (japonica cultivar-group) chromosome... 58 3e-05
11dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
12gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 58 3e-05
13ref|NM_104593.3| Arabidopsis thaliana DNA binding / transcriptio... 44 0.39
14ref|NM_001036128.1| Arabidopsis thaliana DNA binding / transcrip... 44 0.39
15gb|BT015864.1| Arabidopsis thaliana At1g58110 mRNA, complete cds 44 0.39
16gb|BT003980.1| Arabidopsis thaliana clone RAFL15-22-D03 (R20596)... 44 0.39
17gb|DQ160070.1| Taraxacum officinale TO56-2 (To56-2) mRNA, partia... 42 1.5
18gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome 40 6.1
19ref|NM_100488.3| Arabidopsis thaliana DNA binding / transcriptio... 40 6.1
20gb|AC166902.2| Mus musculus BAC clone RP24-425L9 from chromosome... 40 6.1
21gb|AC108874.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.1
22gb|AC113540.12| Mus musculus chromosome 17, clone RP23-158F13, c... 40 6.1
23gb|AC126458.3| Mus musculus BAC clone RP23-154H24 from chromosom... 40 6.1
24gb|AC125044.3| Mus musculus BAC clone RP23-348B10 from chromosom... 40 6.1
25gb|AC127326.4| Mus musculus BAC clone RP23-251C4 from 8, complet... 40 6.1
26emb|AL627313.16| Human DNA sequence from clone RP11-492M19 on ch... 40 6.1
27gb|U00096.2| Escherichia coli K-12 MG1655, complete genome 40 6.1
28gb|AC159101.2| Mus musculus BAC clone RP24-212G22 from chromosom... 40 6.1
29dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome 40 6.1
30gb|AC021887.4|AC021887 Homo sapiens BAC clone RP11-777M17 from 1... 40 6.1
31dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.1
32emb|BX816926.1|CNS0ADVF Arabidopsis thaliana Full-length cDNA Co... 40 6.1
33emb|BX816591.1|CNS0ADCI Arabidopsis thaliana Full-length cDNA Co... 40 6.1
34emb|BX815124.1|CNS0ACRR Arabidopsis thaliana Full-length cDNA Co... 40 6.1
35gb|AY085706.1| Arabidopsis thaliana clone 17213 mRNA, complete s... 40 6.1
36gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome 40 6.1
37gb|AC024174.2|T21E18 Sequence of BAC T21E18 from Arabidopsis tha... 40 6.1
38emb|AJ419854.1|ATH419854 Arabidopsis thaliana mRNA for AtbZIP tr... 40 6.1
39gb|AF056583.1|AF056583 Cordyceps gansuensis 5.8S ribosomal RNA, ... 40 6.1
40gb|U18997.1|ECOUW67 Escherichia coli K-12 chromosomal region fro... 40 6.1
41emb|AL845275.20| Mouse DNA sequence from clone RP23-112F5 on chr... 40 6.1
42gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome 40 6.1
43dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome 40 6.1
44gb|CP000030.1| Anaplasma marginale str. St. Maries, complete genome 40 6.1
45gb|CP000036.1| Shigella boydii Sb227, complete genome 40 6.1
46gb|CP000038.1| Shigella sonnei Ss046, complete genome 40 6.1 
>gb|AY105123.1| Zea mays PCO091259 mRNA sequence
          Length = 921

 Score =  168 bits (85), Expect = 1e-38
 Identities = 171/199 (85%), Gaps = 1/199 (0%)
 Strand = Plus / Plus

                                                                       
Query: 249 gcactctcagtcagaggcagacaccaaatgcgccaaacagcaatatgctcagaggtctc- 307
           |||||||||||| ||| | ||||||||| | |||||||| |||||||||||||| |||| 
Sbjct: 249 gcactctcagtcggagactgacaccaaacgagccaaacaacaatatgctcagagatctcc 308

                                                                       
Query: 308 gtgtccggaagctccagtacattgcagagctcgagagcanagttcaagccttacagacac 367
           ||||||||||||||||||| ||||||||||| ||||| | ||||||  ||||||||||| 
Sbjct: 309 gtgtccggaagctccagtatattgcagagcttgagagaagagttcagtccttacagacag 368

                                                                       
Query: 368 aaggggtagaagtttcagctgaaatggattntctaggtcaacaaaatatcatgttagacc 427
           | ||  |||||||  | ||||||||||||| ||| ||||| |||||||||||||||||| 
Sbjct: 369 agggaatagaagtaactgctgaaatggattttctcggtcagcaaaatatcatgttagact 428

                              
Query: 428 tggagaacaaatccttgaa 446
           |||| || ||| |||||||
Sbjct: 429 tggaaaataaagccttgaa 447



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                       
Query: 107 gcatgccgctgccagtgagggagaagaatggtgggcaccatggt 150
           |||||||  ||||||  |||||||||||||| |||| |||||||
Sbjct: 86  gcatgccaatgccaggcagggagaagaatggagggcgccatggt 129
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>gb|BT024110.1| Zea mays clone EL01N0515D05 mRNA sequence
          Length = 1801

 Score =  153 bits (77), Expect = 6e-34
 Identities = 162/191 (84%)
 Strand = Plus / Plus

                                                                       
Query: 256 cagtcagaggcagacaccaaatgcgccaaacagcaatatgctcagaggtctcgtgtccgg 315
           ||||||||||| |||| |||  | || |||||||||||||||||||||||||||||||||
Sbjct: 804 cagtcagaggcggacaacaagcgtgctaaacagcaatatgctcagaggtctcgtgtccgg 863

                                                                       
Query: 316 aagctccagtacattgcagagctcgagagcanagttcaagccttacagacacaaggggta 375
           ||||| ||||| ||||||||||| ||||| | ||| || || |||||| || ||||||||
Sbjct: 864 aagctgcagtatattgcagagcttgagagtagagtccaggcattacagtcagaaggggta 923

                                                                       
Query: 376 gaagtttcagctgaaatggattntctaggtcaacaaaatatcatgttagacctggagaac 435
           ||||| || ||||||||||| |  ||  | || || ||||||||| |||||||||| |||
Sbjct: 924 gaagtgtctgctgaaatggagttccttagccagcagaatatcatgctagacctggaaaac 983

                      
Query: 436 aaatccttgaa 446
           ||| |||||||
Sbjct: 984 aaagccttgaa 994
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>gb|AY108212.1| Zea mays PCO110549 mRNA sequence
          Length = 917

 Score =  153 bits (77), Expect = 6e-34
 Identities = 162/191 (84%)
 Strand = Plus / Plus

                                                                       
Query: 256 cagtcagaggcagacaccaaatgcgccaaacagcaatatgctcagaggtctcgtgtccgg 315
           ||||||||||| |||| |||  | || |||||||||||||||||||||||||||||||||
Sbjct: 273 cagtcagaggcggacaacaagcgtgctaaacagcaatatgctcagaggtctcgtgtccgg 332

                                                                       
Query: 316 aagctccagtacattgcagagctcgagagcanagttcaagccttacagacacaaggggta 375
           ||||| ||||| ||||||||||| ||||| | ||| || || |||||| || ||||||||
Sbjct: 333 aagctgcagtatattgcagagcttgagagtagagtccaggcattacagtcagaaggggta 392

                                                                       
Query: 376 gaagtttcagctgaaatggattntctaggtcaacaaaatatcatgttagacctggagaac 435
           ||||| || ||||||||||| |  ||  | || || ||||||||| |||||||||| |||
Sbjct: 393 gaagtgtctgctgaaatggagttccttagccagcagaatatcatgctagacctggaaaac 452

                      
Query: 436 aaatccttgaa 446
           ||| |||||||
Sbjct: 453 aaagccttgaa 463
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 66/72 (91%)
 Strand = Plus / Plus

                                                                           
Query: 292     tatgctcagaggtctcgtgtccggaagctccagtacattgcagagctcgagagcanagtt 351
               ||||||||||||||||||||  | ||||||||||||||||||||||||||||| | ||||
Sbjct: 4856982 tatgctcagaggtctcgtgttagaaagctccagtacattgcagagctcgagagaagagtt 4857041

                           
Query: 352     caagccttacag 363
               ||||| ||||||
Sbjct: 4857042 caagctttacag 4857053



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 69/77 (89%)
 Strand = Plus / Plus

                                                                           
Query: 373     gtagaagtttcagctgaaatggattntctaggtcaacaaaatatcatgttagacctggag 432
               ||||||||||| ||||| ||||||| ||| |||||||||||||||||||||||  |||||
Sbjct: 4857154 gtagaagtttctgctgagatggattttcttggtcaacaaaatatcatgttagatttggag 4857213

                                
Query: 433     aacaaatccttgaaaca 449
               || ||| ||||||||||
Sbjct: 4857214 aataaagccttgaaaca 4857230



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                   
Query: 240     acacctaaagcactctcagtcagaggcagacaccaa 275
               |||||||| |||||| || || ||||||||||||||
Sbjct: 4849117 acacctaaggcactcccaatcggaggcagacaccaa 4849152
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>emb|AL713953.3|CNS07YPY Oryza sativa chromosome 12, . BAC OJ1134_A05 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 120825

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 66/72 (91%)
 Strand = Plus / Minus

                                                                         
Query: 292   tatgctcagaggtctcgtgtccggaagctccagtacattgcagagctcgagagcanagtt 351
             ||||||||||||||||||||  | ||||||||||||||||||||||||||||| | ||||
Sbjct: 81440 tatgctcagaggtctcgtgttagaaagctccagtacattgcagagctcgagagaagagtt 81381

                         
Query: 352   caagccttacag 363
             ||||| ||||||
Sbjct: 81380 caagctttacag 81369



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 69/77 (89%)
 Strand = Plus / Minus

                                                                         
Query: 373   gtagaagtttcagctgaaatggattntctaggtcaacaaaatatcatgttagacctggag 432
             ||||||||||| ||||| ||||||| ||| |||||||||||||||||||||||  |||||
Sbjct: 81268 gtagaagtttctgctgagatggattttcttggtcaacaaaatatcatgttagatttggag 81209

                              
Query: 433   aacaaatccttgaaaca 449
             || ||| ||||||||||
Sbjct: 81208 aataaagccttgaaaca 81192



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 240   acacctaaagcactctcagtcagaggcagacaccaa 275
             |||||||| |||||| || || ||||||||||||||
Sbjct: 89305 acacctaaggcactcccaatcggaggcagacaccaa 89270
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 66/72 (91%)
 Strand = Plus / Plus

                                                                           
Query: 292     tatgctcagaggtctcgtgtccggaagctccagtacattgcagagctcgagagcanagtt 351
               ||||||||||||||||||||  | ||||||||||||||||||||||||||||| | ||||
Sbjct: 4856964 tatgctcagaggtctcgtgttagaaagctccagtacattgcagagctcgagagaagagtt 4857023

                           
Query: 352     caagccttacag 363
               ||||| ||||||
Sbjct: 4857024 caagctttacag 4857035



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 69/77 (89%)
 Strand = Plus / Plus

                                                                           
Query: 373     gtagaagtttcagctgaaatggattntctaggtcaacaaaatatcatgttagacctggag 432
               ||||||||||| ||||| ||||||| ||| |||||||||||||||||||||||  |||||
Sbjct: 4857136 gtagaagtttctgctgagatggattttcttggtcaacaaaatatcatgttagatttggag 4857195

                                
Query: 433     aacaaatccttgaaaca 449
               || ||| ||||||||||
Sbjct: 4857196 aataaagccttgaaaca 4857212



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                   
Query: 240     acacctaaagcactctcagtcagaggcagacaccaa 275
               |||||||| |||||| || || ||||||||||||||
Sbjct: 4849098 acacctaaggcactcccaatcggaggcagacaccaa 4849133
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>emb|BX536967.2|CNS09SBH Oryza sativa chromosome 12, . BAC OSJNBa0029N15 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 141053

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 66/72 (91%)
 Strand = Plus / Minus

                                                                          
Query: 292    tatgctcagaggtctcgtgtccggaagctccagtacattgcagagctcgagagcanagtt 351
              ||||||||||||||||||||  | ||||||||||||||||||||||||||||| | ||||
Sbjct: 102977 tatgctcagaggtctcgtgttagaaagctccagtacattgcagagctcgagagaagagtt 102918

                          
Query: 352    caagccttacag 363
              ||||| ||||||
Sbjct: 102917 caagctttacag 102906



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 69/77 (89%)
 Strand = Plus / Minus

                                                                          
Query: 373    gtagaagtttcagctgaaatggattntctaggtcaacaaaatatcatgttagacctggag 432
              ||||||||||| ||||| ||||||| ||| |||||||||||||||||||||||  |||||
Sbjct: 102805 gtagaagtttctgctgagatggattttcttggtcaacaaaatatcatgttagatttggag 102746

                               
Query: 433    aacaaatccttgaaaca 449
              || ||| ||||||||||
Sbjct: 102745 aataaagccttgaaaca 102729



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                  
Query: 240    acacctaaagcactctcagtcagaggcagacaccaa 275
              |||||||| |||||| || || ||||||||||||||
Sbjct: 110843 acacctaaggcactcccaatcggaggcagacaccaa 110808
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>dbj|AK072267.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004I18, full
            insert sequence
          Length = 1822

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 148/182 (81%)
 Strand = Plus / Plus

                                                                        
Query: 262  gaggcagacaccaaatgcgccaaacagcaatatgctcagaggtctcgtgtccggaagctc 321
            ||||| ||||||||  |||| ||||||||||||||||| ||||| || || |||||||| 
Sbjct: 883  gaggcggacaccaagcgcgctaaacagcaatatgctcaaaggtcccgcgttcggaagctt 942

                                                                        
Query: 322  cagtacattgcagagctcgagagcanagttcaagccttacagacacaaggggtagaagtt 381
            || || ||||||||||| ||||| | |||||| || |||||| || ||||| |||| || 
Sbjct: 943  caatatattgcagagcttgagagaaaagttcaggcattacagtcagaagggatagatgtg 1002

                                                                        
Query: 382  tcagctgaaatggattntctaggtcaacaaaatatcatgttagacctggagaacaaatcc 441
            || ||||||||||| | |||  | ||||| ||||| ||| | ||| |||| |||||| ||
Sbjct: 1003 tctgctgaaatggagtttcttagccaacagaatattatgcttgacttggaaaacaaagcc 1062

              
Query: 442  tt 443
            ||
Sbjct: 1063 tt 1064
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>gb|AC123517.2| Oryza sativa japonica cultivar-group chromosome 11 clone OSJNBb0074K09,
              complete sequence
          Length = 135363

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 64/76 (84%)
 Strand = Plus / Plus

                                                                          
Query: 288    gcaatatgctcagaggtctcgtgtccggaagctccagtacattgcagagctcgagagcan 347
              |||||||||||| ||||| || || |||||||| || || ||||||||||| ||||| | 
Sbjct: 123149 gcaatatgctcaaaggtcccgcgttcggaagcttcaatatattgcagagcttgagagaaa 123208

                              
Query: 348    agttcaagccttacag 363
              |||||| || ||||||
Sbjct: 123209 agttcaggcattacag 123224
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>gb|AC137989.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
            OSJNBb0050G15, complete sequence
          Length = 152556

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 64/76 (84%)
 Strand = Plus / Plus

                                                                        
Query: 288  gcaatatgctcagaggtctcgtgtccggaagctccagtacattgcagagctcgagagcan 347
            |||||||||||| ||||| || || |||||||| || || ||||||||||| ||||| | 
Sbjct: 9056 gcaatatgctcaaaggtcccgcgttcggaagcttcaatatattgcagagcttgagagaaa 9115

                            
Query: 348  agttcaagccttacag 363
            |||||| || ||||||
Sbjct: 9116 agttcaggcattacag 9131
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 64/76 (84%)
 Strand = Plus / Plus

                                                                           
Query: 288     gcaatatgctcagaggtctcgtgtccggaagctccagtacattgcagagctcgagagcan 347
               |||||||||||| ||||| || || |||||||| || || ||||||||||| ||||| | 
Sbjct: 6067066 gcaatatgctcaaaggtcccgcgttcggaagcttcaatatattgcagagcttgagagaaa 6067125

                               
Query: 348     agttcaagccttacag 363
               |||||| || ||||||
Sbjct: 6067126 agttcaggcattacag 6067141
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 64/76 (84%)
 Strand = Plus / Plus

                                                                           
Query: 288     gcaatatgctcagaggtctcgtgtccggaagctccagtacattgcagagctcgagagcan 347
               |||||||||||| ||||| || || |||||||| || || ||||||||||| ||||| | 
Sbjct: 6133533 gcaatatgctcaaaggtcccgcgttcggaagcttcaatatattgcagagcttgagagaaa 6133592

                               
Query: 348     agttcaagccttacag 363
               |||||| || ||||||
Sbjct: 6133593 agttcaggcattacag 6133608
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>ref|NM_104593.3| Arabidopsis thaliana DNA binding / transcription factor AT1G58110
           transcript variant AT1G58110.1 mRNA, complete cds
          Length = 1631

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 280 gccaaacagcaatatgctcagaggtctcgtgtccggaagctccagtacat 329
           ||||||||||||| ||| || || || || ||||| ||||||||||||||
Sbjct: 773 gccaaacagcaatttgcacaaagatcacgggtccgtaagctccagtacat 822
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>ref|NM_001036128.1| Arabidopsis thaliana DNA binding / transcription factor AT1G58110
           transcript variant AT1G58110.2 mRNA, complete cds
          Length = 1725

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 280 gccaaacagcaatatgctcagaggtctcgtgtccggaagctccagtacat 329
           ||||||||||||| ||| || || || || ||||| ||||||||||||||
Sbjct: 867 gccaaacagcaatttgcacaaagatcacgggtccgtaagctccagtacat 916
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>gb|BT015864.1| Arabidopsis thaliana At1g58110 mRNA, complete cds
          Length = 1125

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 280 gccaaacagcaatatgctcagaggtctcgtgtccggaagctccagtacat 329
           ||||||||||||| ||| || || || || ||||| ||||||||||||||
Sbjct: 712 gccaaacagcaatttgcacaaagatcacgggtccgtaagctccagtacat 761
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>gb|BT003980.1| Arabidopsis thaliana clone RAFL15-22-D03 (R20596) putative bZIP
           family transcription factor (At1g58110) mRNA, complete
           cds
          Length = 1648

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 280 gccaaacagcaatatgctcagaggtctcgtgtccggaagctccagtacat 329
           ||||||||||||| ||| || || || || ||||| ||||||||||||||
Sbjct: 775 gccaaacagcaatttgcacaaagatcacgggtccgtaagctccagtacat 824
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>gb|DQ160070.1| Taraxacum officinale TO56-2 (To56-2) mRNA, partial cds
          Length = 180

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 310 gtccggaagctccagtacattgcagagct 338
           ||||||||||| ||||||||||| |||||
Sbjct: 6   gtccggaagcttcagtacattgctgagct 34
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>gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome
          Length = 4607203

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 106     agcatgccgctgccagtgag 125
               ||||||||||||||||||||
Sbjct: 3279785 agcatgccgctgccagtgag 3279766
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>ref|NM_100488.3| Arabidopsis thaliana DNA binding / transcription factor AT1G06070
           mRNA, complete cds
          Length = 1893

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 325 tacattgcagagctcgagag 344
           ||||||||||||||||||||
Sbjct: 949 tacattgcagagctcgagag 968
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>gb|AC166902.2| Mus musculus BAC clone RP24-425L9 from chromosome 9, complete sequence
          Length = 184017

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 188   atgcatctcataatcatatc 207
             ||||||||||||||||||||
Sbjct: 83507 atgcatctcataatcatatc 83526
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>gb|AC108874.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1005_E12,
             complete sequence
          Length = 121293

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 133   aatggtgggcaccatggtgc 152
             ||||||||||||||||||||
Sbjct: 42322 aatggtgggcaccatggtgc 42303
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>gb|AC113540.12| Mus musculus chromosome 17, clone RP23-158F13, complete sequence
          Length = 219781

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 53   tcccagacagaatgttcctg 72
            ||||||||||||||||||||
Sbjct: 1352 tcccagacagaatgttcctg 1333
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>gb|AC126458.3| Mus musculus BAC clone RP23-154H24 from chromosome 2, complete sequence
          Length = 203687

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 364    acacaaggggtagaagtttc 383
              ||||||||||||||||||||
Sbjct: 100716 acacaaggggtagaagtttc 100697
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>gb|AC125044.3| Mus musculus BAC clone RP23-348B10 from chromosome 17, complete
             sequence
          Length = 222615

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 53    tcccagacagaatgttcctg 72
             ||||||||||||||||||||
Sbjct: 96914 tcccagacagaatgttcctg 96933
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>gb|AC127326.4| Mus musculus BAC clone RP23-251C4 from 8, complete sequence
          Length = 207802

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 405   tcaacaaaatatcatgttag 424
             ||||||||||||||||||||
Sbjct: 83348 tcaacaaaatatcatgttag 83367
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>emb|AL627313.16| Human DNA sequence from clone RP11-492M19 on chromosome 1 Contains a
             novel pseudogene (LOC151871), a novel gene similar to
             ribosomal protein S6 kinase, 90kDa, polypeptide 1
             (RPS6KA1), a chromosome 20 open reading frame 52
             (C20orf52) pseudogene and two CpG islands, complete
             sequence
          Length = 128342

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 252   ctctcagtcagaggcagaca 271
             ||||||||||||||||||||
Sbjct: 97314 ctctcagtcagaggcagaca 97295
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>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome
          Length = 4639675

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 106     agcatgccgctgccagtgag 125
               ||||||||||||||||||||
Sbjct: 3286936 agcatgccgctgccagtgag 3286917
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>gb|AC159101.2| Mus musculus BAC clone RP24-212G22 from chromosome 9, complete sequence
          Length = 183017

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 188    atgcatctcataatcatatc 207
              ||||||||||||||||||||
Sbjct: 174182 atgcatctcataatcatatc 174201
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>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome
          Length = 4646332

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 106     agcatgccgctgccagtgag 125
               ||||||||||||||||||||
Sbjct: 3288769 agcatgccgctgccagtgag 3288750
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>gb|AC021887.4|AC021887 Homo sapiens BAC clone RP11-777M17 from 12, complete sequence
          Length = 194497

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 283    aaacagcaatatgctcagag 302
              ||||||||||||||||||||
Sbjct: 136295 aaacagcaatatgctcagag 136276
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 133      aatggtgggcaccatggtgc 152
                ||||||||||||||||||||
Sbjct: 17911573 aatggtgggcaccatggtgc 17911554
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>emb|BX816926.1|CNS0ADVF Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH77ZC11 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1847

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 325 tacattgcagagctcgagag 344
           ||||||||||||||||||||
Sbjct: 932 tacattgcagagctcgagag 951
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>emb|BX816591.1|CNS0ADCI Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH57ZE11 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1861

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 325 tacattgcagagctcgagag 344
           ||||||||||||||||||||
Sbjct: 917 tacattgcagagctcgagag 936
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>emb|BX815124.1|CNS0ACRR Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS35ZG11 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1028

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 325 tacattgcagagctcgagag 344
           ||||||||||||||||||||
Sbjct: 282 tacattgcagagctcgagag 301
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>gb|AY085706.1| Arabidopsis thaliana clone 17213 mRNA, complete sequence
          Length = 1823

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 325 tacattgcagagctcgagag 344
           ||||||||||||||||||||
Sbjct: 952 tacattgcagagctcgagag 971
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>gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome
          Length = 4599354

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 106     agcatgccgctgccagtgag 125
               ||||||||||||||||||||
Sbjct: 3270903 agcatgccgctgccagtgag 3270884
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>gb|AC024174.2|T21E18 Sequence of BAC T21E18 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 74316

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 325   tacattgcagagctcgagag 344
             ||||||||||||||||||||
Sbjct: 35341 tacattgcagagctcgagag 35322
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>emb|AJ419854.1|ATH419854 Arabidopsis thaliana mRNA for AtbZIP transcription factor
          Length = 1776

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 325 tacattgcagagctcgagag 344
           ||||||||||||||||||||
Sbjct: 891 tacattgcagagctcgagag 910
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>gb|AF056583.1|AF056583 Cordyceps gansuensis 5.8S ribosomal RNA, and internal transcribed
           sequence 2, partial sequence
          Length = 301

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 412 aatatcatgttagacctgga 431
           ||||||||||||||||||||
Sbjct: 257 aatatcatgttagacctgga 276
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>gb|U18997.1|ECOUW67 Escherichia coli K-12 chromosomal region from 67.4 to 76.0 minutes
          Length = 372438

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 106   agcatgccgctgccagtgag 125
             ||||||||||||||||||||
Sbjct: 69666 agcatgccgctgccagtgag 69647
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>emb|AL845275.20| Mouse DNA sequence from clone RP23-112F5 on chromosome 2, complete
              sequence
          Length = 227422

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 364    acacaaggggtagaagtttc 383
              ||||||||||||||||||||
Sbjct: 209785 acacaaggggtagaagtttc 209766
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>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome
          Length = 5528445

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 106     agcatgccgctgccagtgag 125
               ||||||||||||||||||||
Sbjct: 4097670 agcatgccgctgccagtgag 4097651
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>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome
          Length = 5498450

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 106     agcatgccgctgccagtgag 125
               ||||||||||||||||||||
Sbjct: 4030454 agcatgccgctgccagtgag 4030435
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>gb|CP000030.1| Anaplasma marginale str. St. Maries, complete genome
          Length = 1197687

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 310    gtccggaagctccagtacat 329
              ||||||||||||||||||||
Sbjct: 367771 gtccggaagctccagtacat 367752
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>gb|CP000036.1| Shigella boydii Sb227, complete genome
          Length = 4519823

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 106     agcatgccgctgccagtgag 125
               ||||||||||||||||||||
Sbjct: 3249999 agcatgccgctgccagtgag 3250018
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>gb|CP000038.1| Shigella sonnei Ss046, complete genome
          Length = 4825265

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 106     agcatgccgctgccagtgag 125
               ||||||||||||||||||||
Sbjct: 3464392 agcatgccgctgccagtgag 3464373


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,601,940
Number of Sequences: 3902068
Number of extensions: 3601940
Number of successful extensions: 85984
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 85649
Number of HSP's gapped (non-prelim): 334
length of query: 453
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 431
effective length of database: 17,147,199,772
effective search space: 7390443101732
effective search space used: 7390443101732
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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