ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd23p17 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_463649.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3072 Score = 428 bits (216), Expect = e-117 Identities = 472/556 (84%), Gaps = 1/556 (0%) Strand = Plus / Plus Query: 54 gttcaaatatatccagggagcataacttgaatgtaatcatgaagccgcttcgtgcaagta 113 ||||| ||| ||||||||| ||||||||||||||||| |||||||||||||||||||| | Sbjct: 2474 gttcagatacatccagggaacataacttgaatgtaataatgaagccgcttcgtgcaagca 2533 Query: 114 tgcttgaggcctcactaaggcgggttttgggtggagtagataaggcgcatgtcaagaatg 173 ||||| ||| ||||||| | || | | ||||| || ||||||| ||| || ||||| Sbjct: 2534 tgcttcaggtctcactacgacgagcactaggtggggtcgataaggtgcactgcaggaatg 2593 Query: 174 gactggttggcaactcagcgttgggtagccttcttcacaagaggaaaatcattgtggttg 233 || | |||||||| ||| | ||||| |||||||||||||||| | |||||||||| || | Sbjct: 2594 gagtagttggcaattcaacattgggcagccttcttcacaagaagcaaatcattgttgtcg 2653 Query: 234 acgacaacgctgtgaaccttaaagtggctgctggtgctctcaagaagtacggggcagaag 293 ||||||| || ||||| || ||||||||||||||||| |||||||| || || |||| Sbjct: 2654 acgacaatatcgttaacctgaaggtggctgctggtgctcttaagaagtatggtgccgaag 2713 Query: 294 taatttgcgcagacagtgggaagaaagcaattgcattgctaaaaccacctcacagttttg 353 | | ||| |||||||| ||||| |||||||| ||||||||||||| || |||| ||||| Sbjct: 2714 ttacttgtgcagacagcgggaaaaaagcaatcacattgctaaaacccccgcacaattttg 2773 Query: 354 atgcttgtttcatggacatacaaatgccagaaatggatgggtttgaagccaccaagagaa 413 |||||||||||||||||||||| ||||||||||||||||||||||||||||| | || | Sbjct: 2774 atgcttgtttcatggacatacagatgccagaaatggatgggtttgaagccactagaagga 2833 Query: 414 tcagaatgatggaaagagagctaaatgagcgggtagaacgcggagaggctccaccagaat 473 | ||| ||||||||||||| ||||||||||| |||||||||||||||| |||||||||| Sbjct: 2834 ttagagtgatggaaagagatctaaatgagcgaatagaacgcggagaggcgccaccagaat 2893 Query: 474 gtgcctaacgttaggaggtggcgaactccgatactggcaatgacagcagacgttatccag 533 ||| ||| || ||||||||||||||| ||| |||| ||||| ||||| ||||| ||| Sbjct: 2894 gtg-ctagtattcagaggtggcgaactcctatattggcgatgacggcagatgttatacag 2952 Query: 534 gcaacatatgagcactgtttgaaatgtgaaatggatggctatgtctccaagccatttgaa 593 |||||| | ||| | || ||||| | ||||||||||||||||||||||||||||||||| Sbjct: 2953 gcaacacacgaggagtgcctgaaaagcgaaatggatggctatgtctccaagccatttgaa 3012 Query: 594 ggggagcagttgtaca 609 ||||||||| |||||| Sbjct: 3013 ggggagcagctgtaca 3028
>gb|AY211488.1| Oryza sativa (indica cultivar-group) histidine kinase (HK1) mRNA, partial cds Length = 1467 Score = 428 bits (216), Expect = e-117 Identities = 472/556 (84%), Gaps = 1/556 (0%) Strand = Plus / Plus Query: 54 gttcaaatatatccagggagcataacttgaatgtaatcatgaagccgcttcgtgcaagta 113 ||||| ||| ||||||||| ||||||||||||||||| |||||||||||||||||||| | Sbjct: 869 gttcagatacatccagggaacataacttgaatgtaataatgaagccgcttcgtgcaagca 928 Query: 114 tgcttgaggcctcactaaggcgggttttgggtggagtagataaggcgcatgtcaagaatg 173 ||||| ||| ||||||| | || | | ||||| || ||||||| ||| || ||||| Sbjct: 929 tgcttcaggtctcactacgacgagcactaggtggggtcgataaggtgcactgcaggaatg 988 Query: 174 gactggttggcaactcagcgttgggtagccttcttcacaagaggaaaatcattgtggttg 233 || | |||||||| ||| | ||||| |||||||||||||||| | |||||||||| || | Sbjct: 989 gagtagttggcaattcaacattgggcagccttcttcacaagaagcaaatcattgttgtcg 1048 Query: 234 acgacaacgctgtgaaccttaaagtggctgctggtgctctcaagaagtacggggcagaag 293 ||||||| || ||||| || ||||||||||||||||| |||||||| || || |||| Sbjct: 1049 acgacaatatcgttaacctgaaggtggctgctggtgctcttaagaagtatggtgccgaag 1108 Query: 294 taatttgcgcagacagtgggaagaaagcaattgcattgctaaaaccacctcacagttttg 353 | | ||| |||||||| ||||| |||||||| ||||||||||||| || |||| ||||| Sbjct: 1109 ttacttgtgcagacagcgggaaaaaagcaatcacattgctaaaacccccgcacaattttg 1168 Query: 354 atgcttgtttcatggacatacaaatgccagaaatggatgggtttgaagccaccaagagaa 413 |||||||||||||||||||||| ||||||||||||||||||||||||||||| | || | Sbjct: 1169 atgcttgtttcatggacatacagatgccagaaatggatgggtttgaagccactagaagga 1228 Query: 414 tcagaatgatggaaagagagctaaatgagcgggtagaacgcggagaggctccaccagaat 473 | ||| ||||||||||||| ||||||||||| |||||||||||||||| |||||||||| Sbjct: 1229 ttagagtgatggaaagagatctaaatgagcgaatagaacgcggagaggcgccaccagaat 1288 Query: 474 gtgcctaacgttaggaggtggcgaactccgatactggcaatgacagcagacgttatccag 533 ||| ||| || ||||||||||||||| ||| |||| ||||| ||||| ||||| ||| Sbjct: 1289 gtg-ctagtattcagaggtggcgaactcctatattggcgatgacggcagatgttatacag 1347 Query: 534 gcaacatatgagcactgtttgaaatgtgaaatggatggctatgtctccaagccatttgaa 593 |||||| | ||| | || ||||| | ||||||||||||||||||||||||||||||||| Sbjct: 1348 gcaacacacgaggagtgcctgaaaagcgaaatggatggctatgtctccaagccatttgaa 1407 Query: 594 ggggagcagttgtaca 609 ||||||||| |||||| Sbjct: 1408 ggggagcagctgtaca 1423
>dbj|AK067355.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099L13, full insert sequence Length = 1829 Score = 428 bits (216), Expect = e-117 Identities = 472/556 (84%), Gaps = 1/556 (0%) Strand = Plus / Plus Query: 54 gttcaaatatatccagggagcataacttgaatgtaatcatgaagccgcttcgtgcaagta 113 ||||| ||| ||||||||| ||||||||||||||||| |||||||||||||||||||| | Sbjct: 717 gttcagatacatccagggaacataacttgaatgtaataatgaagccgcttcgtgcaagca 776 Query: 114 tgcttgaggcctcactaaggcgggttttgggtggagtagataaggcgcatgtcaagaatg 173 ||||| ||| ||||||| | || | | ||||| || ||||||| ||| || ||||| Sbjct: 777 tgcttcaggtctcactacgacgagcactaggtggggtcgataaggtgcactgcaggaatg 836 Query: 174 gactggttggcaactcagcgttgggtagccttcttcacaagaggaaaatcattgtggttg 233 || | |||||||| ||| | ||||| |||||||||||||||| | |||||||||| || | Sbjct: 837 gagtagttggcaattcaacattgggcagccttcttcacaagaagcaaatcattgttgtcg 896 Query: 234 acgacaacgctgtgaaccttaaagtggctgctggtgctctcaagaagtacggggcagaag 293 ||||||| || ||||| || ||||||||||||||||| |||||||| || || |||| Sbjct: 897 acgacaatatcgttaacctgaaggtggctgctggtgctcttaagaagtatggtgccgaag 956 Query: 294 taatttgcgcagacagtgggaagaaagcaattgcattgctaaaaccacctcacagttttg 353 | | ||| |||||||| ||||| |||||||| ||||||||||||| || |||| ||||| Sbjct: 957 ttacttgtgcagacagcgggaaaaaagcaatcacattgctaaaacccccgcacaattttg 1016 Query: 354 atgcttgtttcatggacatacaaatgccagaaatggatgggtttgaagccaccaagagaa 413 |||||||||||||||||||||| ||||||||||||||||||||||||||||| | || | Sbjct: 1017 atgcttgtttcatggacatacagatgccagaaatggatgggtttgaagccactagaagga 1076 Query: 414 tcagaatgatggaaagagagctaaatgagcgggtagaacgcggagaggctccaccagaat 473 | ||| ||||||||||||| ||||||||||| |||||||||||||||| |||||||||| Sbjct: 1077 ttagagtgatggaaagagatctaaatgagcgaatagaacgcggagaggcgccaccagaat 1136 Query: 474 gtgcctaacgttaggaggtggcgaactccgatactggcaatgacagcagacgttatccag 533 ||| ||| || ||||||||||||||| ||| |||| ||||| ||||| ||||| ||| Sbjct: 1137 gtg-ctagtattcagaggtggcgaactcctatattggcgatgacggcagatgttatacag 1195 Query: 534 gcaacatatgagcactgtttgaaatgtgaaatggatggctatgtctccaagccatttgaa 593 |||||| | ||| | || ||||| | ||||||||||||||||||||||||||||||||| Sbjct: 1196 gcaacacacgaggagtgcctgaaaagcgaaatggatggctatgtctccaagccatttgaa 1255 Query: 594 ggggagcagttgtaca 609 ||||||||| |||||| Sbjct: 1256 ggggagcagctgtaca 1271
>gb|DQ248962.1| Oryza sativa (indica cultivar-group) hybrid type histidine kinase mRNA, complete cds Length = 3072 Score = 428 bits (216), Expect = e-117 Identities = 472/556 (84%), Gaps = 1/556 (0%) Strand = Plus / Plus Query: 54 gttcaaatatatccagggagcataacttgaatgtaatcatgaagccgcttcgtgcaagta 113 ||||| ||| ||||||||| ||||||||||||||||| |||||||||||||||||||| | Sbjct: 2474 gttcagatacatccagggaacataacttgaatgtaataatgaagccgcttcgtgcaagca 2533 Query: 114 tgcttgaggcctcactaaggcgggttttgggtggagtagataaggcgcatgtcaagaatg 173 ||||| ||| ||||||| | || | | ||||| || ||||||| ||| || ||||| Sbjct: 2534 tgcttcaggtctcactacgacgagcactaggtggggtcgataaggtgcactgcaggaatg 2593 Query: 174 gactggttggcaactcagcgttgggtagccttcttcacaagaggaaaatcattgtggttg 233 || | |||||||| ||| | ||||| |||||||||||||||| | |||||||||| || | Sbjct: 2594 gagtagttggcaattcaacattgggcagccttcttcacaagaagcaaatcattgttgtcg 2653 Query: 234 acgacaacgctgtgaaccttaaagtggctgctggtgctctcaagaagtacggggcagaag 293 ||||||| || ||||| || ||||||||||||||||| |||||||| || || |||| Sbjct: 2654 acgacaatatcgttaacctgaaggtggctgctggtgctcttaagaagtatggtgccgaag 2713 Query: 294 taatttgcgcagacagtgggaagaaagcaattgcattgctaaaaccacctcacagttttg 353 | | ||| |||||||| ||||| |||||||| ||||||||||||| || |||| ||||| Sbjct: 2714 ttacttgtgcagacagcgggaaaaaagcaatcacattgctaaaacccccgcacaattttg 2773 Query: 354 atgcttgtttcatggacatacaaatgccagaaatggatgggtttgaagccaccaagagaa 413 |||||||||||||||||||||| ||||||||||||||||||||||||||||| | || | Sbjct: 2774 atgcttgtttcatggacatacagatgccagaaatggatgggtttgaagccactagaagga 2833 Query: 414 tcagaatgatggaaagagagctaaatgagcgggtagaacgcggagaggctccaccagaat 473 | ||| ||||||||||||| ||||||||||| |||||||||||||||| |||||||||| Sbjct: 2834 ttagagtgatggaaagagatctaaatgagcgaatagaacgcggagaggcgccaccagaat 2893 Query: 474 gtgcctaacgttaggaggtggcgaactccgatactggcaatgacagcagacgttatccag 533 ||| ||| || ||||||||||||||| ||| |||| ||||| ||||| ||||| ||| Sbjct: 2894 gtg-ctagtattcagaggtggcgaactcctatattggcgatgacggcagatgttatacag 2952 Query: 534 gcaacatatgagcactgtttgaaatgtgaaatggatggctatgtctccaagccatttgaa 593 |||||| | ||| | || ||||| | ||||||||||||||||||||||||||||||||| Sbjct: 2953 gcaacacacgaggagtgcctgaaaagcgaaatggatggctatgtctccaagccatttgaa 3012 Query: 594 ggggagcagttgtaca 609 ||||||||| |||||| Sbjct: 3013 ggggagcagctgtaca 3028
>dbj|AK067580.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013112K17, full insert sequence Length = 2629 Score = 420 bits (212), Expect = e-114 Identities = 472/556 (84%), Gaps = 2/556 (0%) Strand = Plus / Plus Query: 54 gttcaaatatatccagggagcataacttgaatgtaatcatgaagccgcttcgtgcaagta 113 ||||| ||| ||||||||| ||||||||||||||||| |||||||||||||||||||| | Sbjct: 1462 gttcagatacatccagggaacataacttgaatgtaataatgaagccgcttcgtgcaagca 1521 Query: 114 tgcttgaggcctcactaaggcgggttttgggtggagtagataaggcgcatgtcaagaatg 173 ||||| ||| ||||||| | || | | ||||| || ||||||| ||| || ||||| Sbjct: 1522 tgcttcaggtctcactacgacgagcactaggtggggtcgataaggtgcactgcaggaatg 1581 Query: 174 gactggttggcaactcagcgttgggtagccttcttcacaagaggaaaatcattgtggttg 233 || | |||||||| ||| | ||||| |||||||||||||||| | |||||||||| || | Sbjct: 1582 gagtagttggcaattcaacattgggcagccttcttcacaagaagcaaatcattgttgtcg 1641 Query: 234 acgacaacgctgtgaaccttaaagtggctgctggtgctctcaagaagtacggggcagaag 293 ||||||| || ||||| || ||||||||||||||||| |||||||| || || |||| Sbjct: 1642 acgacaatatcgttaacctgaaggtggctgctggtgctcttaagaagtatggtgccgaag 1701 Query: 294 taatttgcgcagacagtgggaagaaagcaattgcattgctaaaaccacctcacagttttg 353 | | ||| |||||||| ||||| |||||||| ||||||||||||| || |||| ||||| Sbjct: 1702 ttacttgtgcagacag-gggaaaaaagcaatcacattgctaaaacccccgcacaattttg 1760 Query: 354 atgcttgtttcatggacatacaaatgccagaaatggatgggtttgaagccaccaagagaa 413 |||||||||||||||||||||| ||||||||||||||||||||||||||||| | || | Sbjct: 1761 atgcttgtttcatggacatacagatgccagaaatggatgggtttgaagccactagaagga 1820 Query: 414 tcagaatgatggaaagagagctaaatgagcgggtagaacgcggagaggctccaccagaat 473 | ||| ||||||||||||| ||||||||||| |||||||||||||||| |||||||||| Sbjct: 1821 ttagagtgatggaaagagatctaaatgagcgaatagaacgcggagaggcgccaccagaat 1880 Query: 474 gtgcctaacgttaggaggtggcgaactccgatactggcaatgacagcagacgttatccag 533 ||| ||| || ||||||||||||||| ||| |||| ||||| ||||| ||||| ||| Sbjct: 1881 gtg-ctagtattcagaggtggcgaactcctatattggcgatgacggcagatgttatacag 1939 Query: 534 gcaacatatgagcactgtttgaaatgtgaaatggatggctatgtctccaagccatttgaa 593 |||||| | ||| | || ||||| | ||||||||||||||||||||||||||||||||| Sbjct: 1940 gcaacacacgaggagtgcctgaaaagcgaaatggatggctatgtctccaagccatttgaa 1999 Query: 594 ggggagcagttgtaca 609 ||||||||| |||||| Sbjct: 2000 ggggagcagctgtaca 2015
>dbj|AK121135.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023077D19, full insert sequence Length = 4044 Score = 392 bits (198), Expect = e-106 Identities = 468/556 (84%), Gaps = 4/556 (0%) Strand = Plus / Plus Query: 54 gttcaaatatatccagggagcataacttgaatgtaatcatgaagccgcttcgtgcaagta 113 ||||| ||| ||||||||| ||||||||||||||||| |||||||||||||||||||| | Sbjct: 2881 gttcagatacatccagggaacataacttgaatgtaataatgaagccgcttcgtgcaagca 2940 Query: 114 tgcttgaggcctcactaaggcgggttttgggtggagtagataaggcgcatgtcaagaatg 173 ||||| ||| ||||||| | || | | ||||| || ||||||| ||| || ||||| Sbjct: 2941 tgcttcaggtctcactacgacgagcactaggtggggtcgataaggtgcactgcaggaatg 3000 Query: 174 gactggttggcaactcagcgttgggtagccttcttcacaagaggaaaatcattgtggttg 233 || | |||||||| ||| | ||||| |||||||||||||||| | |||||||||| || | Sbjct: 3001 gagtagttggcaattcaacattgggcagccttcttcacaagaagcaaatcattgttgtcg 3060 Query: 234 acgacaacgctgtgaaccttaaagtggctgctggtgctctcaagaagtacggggcagaag 293 ||||||| || ||||| || ||||||| ||||||| |||||||| || || |||| Sbjct: 3061 acgacaatatcgttaacctgaaggtggctg---gtgctcttaagaagtatggtgccgaag 3117 Query: 294 taatttgcgcagacagtgggaagaaagcaattgcattgctaaaaccacctcacagttttg 353 | | ||| |||||||| ||||| |||||||| ||||||||||||| || |||| ||||| Sbjct: 3118 ttacttgtgcagacagcgggaaaaaagcaatcacattgctaaaacccccgcacaattttg 3177 Query: 354 atgcttgtttcatggacatacaaatgccagaaatggatgggtttgaagccaccaagagaa 413 |||||||||||||||||||||| ||||||||||||||||||||||||||||| | || | Sbjct: 3178 atgcttgtttcatggacatacagatgccagaaatggatgggtttgaagccactagaagga 3237 Query: 414 tcagaatgatggaaagagagctaaatgagcgggtagaacgcggagaggctccaccagaat 473 | ||| ||||||||||||| ||||||||||| |||||||||||||||| |||||||||| Sbjct: 3238 ttagagtgatggaaagagatctaaatgagcgaatagaacgcggagaggcgccaccagaat 3297 Query: 474 gtgcctaacgttaggaggtggcgaactccgatactggcaatgacagcagacgttatccag 533 ||| ||| || ||||||||||||||| ||| |||| ||||| || || ||||| ||| Sbjct: 3298 gtg-ctagtattcagaggtggcgaactcctatattggcgatgacggcggatgttatacag 3356 Query: 534 gcaacatatgagcactgtttgaaatgtgaaatggatggctatgtctccaagccatttgaa 593 |||||| | ||| | || ||||| | ||||||||||||||||||||||||||||||||| Sbjct: 3357 gcaacacacgaggagtgcctgaaaagcgaaatggatggctatgtctccaagccatttgaa 3416 Query: 594 ggggagcagttgtaca 609 ||||||||| |||||| Sbjct: 3417 ggggagcagctgtaca 3432
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 258 bits (130), Expect = 2e-65 Identities = 289/342 (84%) Strand = Plus / Minus Query: 54 gttcaaatatatccagggagcataacttgaatgtaatcatgaagccgcttcgtgcaagta 113 ||||| ||| ||||||||| ||||||||||||||||| |||||||||||||||||||| | Sbjct: 40397976 gttcagatacatccagggaacataacttgaatgtaataatgaagccgcttcgtgcaagca 40397917 Query: 114 tgcttgaggcctcactaaggcgggttttgggtggagtagataaggcgcatgtcaagaatg 173 ||||| ||| ||||||| | || | | ||||| || ||||||| ||| || ||||| Sbjct: 40397916 tgcttcaggtctcactacgacgagcactaggtggggtcgataaggtgcactgcaggaatg 40397857 Query: 174 gactggttggcaactcagcgttgggtagccttcttcacaagaggaaaatcattgtggttg 233 || | |||||||| ||| | ||||| |||||||||||||||| | |||||||||| || | Sbjct: 40397856 gagtagttggcaattcaacattgggcagccttcttcacaagaagcaaatcattgttgtcg 40397797 Query: 234 acgacaacgctgtgaaccttaaagtggctgctggtgctctcaagaagtacggggcagaag 293 ||||||| || ||||| || ||||||||||||||||| |||||||| || || |||| Sbjct: 40397796 acgacaatatcgttaacctgaaggtggctgctggtgctcttaagaagtatggtgccgaag 40397737 Query: 294 taatttgcgcagacagtgggaagaaagcaattgcattgctaaaaccacctcacagttttg 353 | | ||| |||||||| ||||| |||||||| ||||||||||||| || |||| ||||| Sbjct: 40397736 ttacttgtgcagacagcgggaaaaaagcaatcacattgctaaaacccccgcacaattttg 40397677 Query: 354 atgcttgtttcatggacatacaaatgccagaaatggatgggt 395 |||||||||||||||||||||| ||||||||||||||||||| Sbjct: 40397676 atgcttgtttcatggacatacagatgccagaaatggatgggt 40397635 Score = 176 bits (89), Expect = 6e-41 Identities = 186/217 (85%), Gaps = 1/217 (0%) Strand = Plus / Minus Query: 393 ggtttgaagccaccaagagaatcagaatgatggaaagagagctaaatgagcgggtagaac 452 ||||||||||||| | || || ||| ||||||||||||| ||||||||||| |||||| Sbjct: 40397535 ggtttgaagccactagaaggattagagtgatggaaagagatctaaatgagcgaatagaac 40397476 Query: 453 gcggagaggctccaccagaatgtgcctaacgttaggaggtggcgaactccgatactggca 512 |||||||||| |||||||||||||| || || ||||||||||||||| ||| |||| Sbjct: 40397475 gcggagaggcgccaccagaatgtgc-tagtattcagaggtggcgaactcctatattggcg 40397417 Query: 513 atgacagcagacgttatccaggcaacatatgagcactgtttgaaatgtgaaatggatggc 572 ||||| ||||| ||||| ||||||||| | ||| | || ||||| | |||||||||||| Sbjct: 40397416 atgacggcagatgttatacaggcaacacacgaggagtgcctgaaaagcgaaatggatggc 40397357 Query: 573 tatgtctccaagccatttgaaggggagcagttgtaca 609 |||||||||||||||||||||||||||||| |||||| Sbjct: 40397356 tatgtctccaagccatttgaaggggagcagctgtaca 40397320
>gb|AY211489.1| Oryza sativa (indica cultivar-group) histidine kinase (HK1) gene, partial cds Length = 1794 Score = 258 bits (130), Expect = 2e-65 Identities = 289/342 (84%) Strand = Plus / Minus Query: 54 gttcaaatatatccagggagcataacttgaatgtaatcatgaagccgcttcgtgcaagta 113 ||||| ||| ||||||||| ||||||||||||||||| |||||||||||||||||||| | Sbjct: 701 gttcagatacatccagggaacataacttgaatgtaataatgaagccgcttcgtgcaagca 642 Query: 114 tgcttgaggcctcactaaggcgggttttgggtggagtagataaggcgcatgtcaagaatg 173 ||||| ||| ||||||| | || | | ||||| || ||||||| ||| || ||||| Sbjct: 641 tgcttcaggtctcactacgacgagcactaggtggggtcgataaggtgcactgcaggaatg 582 Query: 174 gactggttggcaactcagcgttgggtagccttcttcacaagaggaaaatcattgtggttg 233 || | |||||||| ||| | ||||| |||||||||||||||| | |||||||||| || | Sbjct: 581 gagtagttggcaattcaacattgggcagccttcttcacaagaagcaaatcattgttgtcg 522 Query: 234 acgacaacgctgtgaaccttaaagtggctgctggtgctctcaagaagtacggggcagaag 293 ||||||| || ||||| || ||||||||||||||||| |||||||| || || |||| Sbjct: 521 acgacaatatcgttaacctgaaggtggctgctggtgctcttaagaagtatggtgccgaag 462 Query: 294 taatttgcgcagacagtgggaagaaagcaattgcattgctaaaaccacctcacagttttg 353 | | ||| |||||||| ||||| |||||||| ||||||||||||| || |||| ||||| Sbjct: 461 ttacttgtgcagacagcgggaaaaaagcaatcacattgctaaaacccccgcacaattttg 402 Query: 354 atgcttgtttcatggacatacaaatgccagaaatggatgggt 395 |||||||||||||||||||||| ||||||||||||||||||| Sbjct: 401 atgcttgtttcatggacatacagatgccagaaatggatgggt 360 Score = 176 bits (89), Expect = 6e-41 Identities = 186/217 (85%), Gaps = 1/217 (0%) Strand = Plus / Minus Query: 393 ggtttgaagccaccaagagaatcagaatgatggaaagagagctaaatgagcgggtagaac 452 ||||||||||||| | || || ||| ||||||||||||| ||||||||||| |||||| Sbjct: 260 ggtttgaagccactagaaggattagagtgatggaaagagatctaaatgagcgaatagaac 201 Query: 453 gcggagaggctccaccagaatgtgcctaacgttaggaggtggcgaactccgatactggca 512 |||||||||| |||||||||||||| || || ||||||||||||||| ||| |||| Sbjct: 200 gcggagaggcgccaccagaatgtgc-tagtattcagaggtggcgaactcctatattggcg 142 Query: 513 atgacagcagacgttatccaggcaacatatgagcactgtttgaaatgtgaaatggatggc 572 ||||| ||||| ||||| ||||||||| | ||| | || ||||| | |||||||||||| Sbjct: 141 atgacggcagatgttatacaggcaacacacgaggagtgcctgaaaagcgaaatggatggc 82 Query: 573 tatgtctccaagccatttgaaggggagcagttgtaca 609 |||||||||||||||||||||||||||||| |||||| Sbjct: 81 tatgtctccaagccatttgaaggggagcagctgtaca 45
>dbj|AP006167.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1455F06 Length = 140848 Score = 258 bits (130), Expect = 2e-65 Identities = 289/342 (84%) Strand = Plus / Minus Query: 54 gttcaaatatatccagggagcataacttgaatgtaatcatgaagccgcttcgtgcaagta 113 ||||| ||| ||||||||| ||||||||||||||||| |||||||||||||||||||| | Sbjct: 106940 gttcagatacatccagggaacataacttgaatgtaataatgaagccgcttcgtgcaagca 106881 Query: 114 tgcttgaggcctcactaaggcgggttttgggtggagtagataaggcgcatgtcaagaatg 173 ||||| ||| ||||||| | || | | ||||| || ||||||| ||| || ||||| Sbjct: 106880 tgcttcaggtctcactacgacgagcactaggtggggtcgataaggtgcactgcaggaatg 106821 Query: 174 gactggttggcaactcagcgttgggtagccttcttcacaagaggaaaatcattgtggttg 233 || | |||||||| ||| | ||||| |||||||||||||||| | |||||||||| || | Sbjct: 106820 gagtagttggcaattcaacattgggcagccttcttcacaagaagcaaatcattgttgtcg 106761 Query: 234 acgacaacgctgtgaaccttaaagtggctgctggtgctctcaagaagtacggggcagaag 293 ||||||| || ||||| || ||||||||||||||||| |||||||| || || |||| Sbjct: 106760 acgacaatatcgttaacctgaaggtggctgctggtgctcttaagaagtatggtgccgaag 106701 Query: 294 taatttgcgcagacagtgggaagaaagcaattgcattgctaaaaccacctcacagttttg 353 | | ||| |||||||| ||||| |||||||| ||||||||||||| || |||| ||||| Sbjct: 106700 ttacttgtgcagacagcgggaaaaaagcaatcacattgctaaaacccccgcacaattttg 106641 Query: 354 atgcttgtttcatggacatacaaatgccagaaatggatgggt 395 |||||||||||||||||||||| ||||||||||||||||||| Sbjct: 106640 atgcttgtttcatggacatacagatgccagaaatggatgggt 106599 Score = 176 bits (89), Expect = 6e-41 Identities = 186/217 (85%), Gaps = 1/217 (0%) Strand = Plus / Minus Query: 393 ggtttgaagccaccaagagaatcagaatgatggaaagagagctaaatgagcgggtagaac 452 ||||||||||||| | || || ||| ||||||||||||| ||||||||||| |||||| Sbjct: 106499 ggtttgaagccactagaaggattagagtgatggaaagagatctaaatgagcgaatagaac 106440 Query: 453 gcggagaggctccaccagaatgtgcctaacgttaggaggtggcgaactccgatactggca 512 |||||||||| |||||||||||||| || || ||||||||||||||| ||| |||| Sbjct: 106439 gcggagaggcgccaccagaatgtgc-tagtattcagaggtggcgaactcctatattggcg 106381 Query: 513 atgacagcagacgttatccaggcaacatatgagcactgtttgaaatgtgaaatggatggc 572 ||||| ||||| ||||| ||||||||| | ||| | || ||||| | |||||||||||| Sbjct: 106380 atgacggcagatgttatacaggcaacacacgaggagtgcctgaaaagcgaaatggatggc 106321 Query: 573 tatgtctccaagccatttgaaggggagcagttgtaca 609 |||||||||||||||||||||||||||||| |||||| Sbjct: 106320 tatgtctccaagccatttgaaggggagcagctgtaca 106284
>dbj|AP004672.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0592G05 Length = 146220 Score = 258 bits (130), Expect = 2e-65 Identities = 289/342 (84%) Strand = Plus / Minus Query: 54 gttcaaatatatccagggagcataacttgaatgtaatcatgaagccgcttcgtgcaagta 113 ||||| ||| ||||||||| ||||||||||||||||| |||||||||||||||||||| | Sbjct: 49217 gttcagatacatccagggaacataacttgaatgtaataatgaagccgcttcgtgcaagca 49158 Query: 114 tgcttgaggcctcactaaggcgggttttgggtggagtagataaggcgcatgtcaagaatg 173 ||||| ||| ||||||| | || | | ||||| || ||||||| ||| || ||||| Sbjct: 49157 tgcttcaggtctcactacgacgagcactaggtggggtcgataaggtgcactgcaggaatg 49098 Query: 174 gactggttggcaactcagcgttgggtagccttcttcacaagaggaaaatcattgtggttg 233 || | |||||||| ||| | ||||| |||||||||||||||| | |||||||||| || | Sbjct: 49097 gagtagttggcaattcaacattgggcagccttcttcacaagaagcaaatcattgttgtcg 49038 Query: 234 acgacaacgctgtgaaccttaaagtggctgctggtgctctcaagaagtacggggcagaag 293 ||||||| || ||||| || ||||||||||||||||| |||||||| || || |||| Sbjct: 49037 acgacaatatcgttaacctgaaggtggctgctggtgctcttaagaagtatggtgccgaag 48978 Query: 294 taatttgcgcagacagtgggaagaaagcaattgcattgctaaaaccacctcacagttttg 353 | | ||| |||||||| ||||| |||||||| ||||||||||||| || |||| ||||| Sbjct: 48977 ttacttgtgcagacagcgggaaaaaagcaatcacattgctaaaacccccgcacaattttg 48918 Query: 354 atgcttgtttcatggacatacaaatgccagaaatggatgggt 395 |||||||||||||||||||||| ||||||||||||||||||| Sbjct: 48917 atgcttgtttcatggacatacagatgccagaaatggatgggt 48876 Score = 176 bits (89), Expect = 6e-41 Identities = 186/217 (85%), Gaps = 1/217 (0%) Strand = Plus / Minus Query: 393 ggtttgaagccaccaagagaatcagaatgatggaaagagagctaaatgagcgggtagaac 452 ||||||||||||| | || || ||| ||||||||||||| ||||||||||| |||||| Sbjct: 48776 ggtttgaagccactagaaggattagagtgatggaaagagatctaaatgagcgaatagaac 48717 Query: 453 gcggagaggctccaccagaatgtgcctaacgttaggaggtggcgaactccgatactggca 512 |||||||||| |||||||||||||| || || ||||||||||||||| ||| |||| Sbjct: 48716 gcggagaggcgccaccagaatgtgc-tagtattcagaggtggcgaactcctatattggcg 48658 Query: 513 atgacagcagacgttatccaggcaacatatgagcactgtttgaaatgtgaaatggatggc 572 ||||| ||||| ||||| ||||||||| | ||| | || ||||| | |||||||||||| Sbjct: 48657 atgacggcagatgttatacaggcaacacacgaggagtgcctgaaaagcgaaatggatggc 48598 Query: 573 tatgtctccaagccatttgaaggggagcagttgtaca 609 |||||||||||||||||||||||||||||| |||||| Sbjct: 48597 tatgtctccaagccatttgaaggggagcagctgtaca 48561
>dbj|AB102956.1| Zea mays ZmHK2 mRNA for histidine kinase 2, complete cds Length = 3609 Score = 240 bits (121), Expect = 4e-60 Identities = 344/416 (82%), Gaps = 3/416 (0%) Strand = Plus / Plus Query: 195 tgggtagccttcttcacaagaggaaaatcattgtggttgacgacaacgctgtgaacctta 254 |||| |||||||||||||||| | |||||| |||||||| || || ||| || || | Sbjct: 2595 tgggcagccttcttcacaagaagcgaatcatagtggttgatgataatattgtaaatctca 2654 Query: 255 aagtggctgctggtgctctcaagaagtacggggcagaagtaatttgcgcagacagtggga 314 | || ||||| |||||||| ||||| || || || ||||||| ||| || |||||||||| Sbjct: 2655 aggttgctgcaggtgctctaaagaaatatggcgcggaagtaacttgtgctgacagtggga 2714 Query: 315 agaaagcaattgcattgctaaaaccacctcacagttttgatgcttgtttcatggacatac 374 || ||||||| || |||| ||||| ||||||| |||||||||||||||||||||||||| Sbjct: 2715 aggaagcaatcacactgctgaaacctcctcacaattttgatgcttgtttcatggacatac 2774 Query: 375 aaatgccagaaatggatgggtttgaagccaccaagagaatcagaatgatggaaagagagc 434 | ||||| ||||||||||| ||||||||||| || || || ||| ||||||||||||| | Sbjct: 2775 agatgcctgaaatggatggatttgaagccacaaaaaggattagagtgatggaaagagatc 2834 Query: 435 taaatgagcgggtagaacgcggagaggctccaccagaatgtgcctaacg-ttaggaggtg 493 ||||||||| ||||||| ||||| || |||||||||| || || | || || ||| Sbjct: 2835 taaatgagcaaatagaacgtggagaagccccaccagaat--gcgtaggggttcggcagtg 2892 Query: 494 gcgaactccgatactggcaatgacagcagacgttatccaggcaacatatgagcactgttt 553 ||||||||| ||| | || ||||||||||| ||||||||||| ||| |||| || || || Sbjct: 2893 gcgaactccaatattagccatgacagcagatgttatccaggcgacacatgaacaatgctt 2952 Query: 554 gaaatgtgaaatggatggctatgtctccaagccatttgaaggggagcagttgtaca 609 ||||| |||||||||||| ||||| ||||||||||| || || ||||| ||||||| Sbjct: 2953 gaaatctgaaatggatggttatgtttccaagccattcgagggcgagcaattgtaca 3008 Score = 107 bits (54), Expect = 4e-20 Identities = 90/102 (88%) Strand = Plus / Plus Query: 17 tttcttttggagaaccctacgaattctatcaagagcagttcaaatatatccagggagcat 76 ||||||||||||||||||| | |||| ||||||||| |||| |||||| |||||| || Sbjct: 2417 tttcttttggagaaccctaaaagttctgtcaagagcaattcacatatattcagggaatat 2476 Query: 77 aacttgaatgtaatcatgaagccgcttcgtgcaagtatgctt 118 |||||||||||||| |||||||| ||||||||||| |||||| Sbjct: 2477 aacttgaatgtaattatgaagccacttcgtgcaagcatgctt 2518
>emb|AJ298990.1|FSY298990 Fagus sylvatica partial mRNA for histidine kinase receptor (hkf1 gene), clone FsHKf1 Length = 744 Score = 85.7 bits (43), Expect = 2e-13 Identities = 130/159 (81%) Strand = Plus / Plus Query: 244 tgtgaaccttaaagtggctgctggtgctctcaagaagtacggggcagaagtaatttgcgc 303 |||||| || ||||| |||||||||||| | |||||||| ||||| || || | || || Sbjct: 457 tgtgaatctaaaagtagctgctggtgctttgaagaagtatggggctgatgtggtatgtgc 516 Query: 304 agacagtgggaagaaagcaattgcattgctaaaaccacctcacagttttgatgcttgttt 363 ||| ||| | | || ||||| | ||| || ||||| |||||| |||||||||| || || Sbjct: 517 agaaagtagaataaaggcaatcgaatttcttaaacctcctcaccgttttgatgcctgctt 576 Query: 364 catggacatacaaatgccagaaatggatgggtttgaagc 402 |||||| || |||||||| |||||||||||||||||||| Sbjct: 577 catggatatccaaatgccggaaatggatgggtttgaagc 615
>ref|NM_102494.2| Arabidopsis thaliana AHK3 (ARABIDOPSIS HISTIDINE KINASE 3) AT1G27320 (AHK3) mRNA, complete cds Length = 3283 Score = 79.8 bits (40), Expect = 1e-11 Identities = 67/76 (88%) Strand = Plus / Plus Query: 327 cattgctaaaaccacctcacagttttgatgcttgtttcatggacatacaaatgccagaaa 386 ||||||| || ||||||||| ||||||||||| ||||||||||| || |||||||||| Sbjct: 2780 cattgcttaagccacctcacgagtttgatgcttgcttcatggacattcagatgccagaaa 2839 Query: 387 tggatgggtttgaagc 402 ||||||| |||||||| Sbjct: 2840 tggatggatttgaagc 2855
>dbj|AB046870.1| Arabidopsis thaliana AHK3 mRNA for histidine kinase, complete cds Length = 3111 Score = 79.8 bits (40), Expect = 1e-11 Identities = 67/76 (88%) Strand = Plus / Plus Query: 327 cattgctaaaaccacctcacagttttgatgcttgtttcatggacatacaaatgccagaaa 386 ||||||| || ||||||||| ||||||||||| ||||||||||| || |||||||||| Sbjct: 2780 cattgcttaagccacctcacgagtttgatgcttgcttcatggacattcagatgccagaaa 2839 Query: 387 tggatgggtttgaagc 402 ||||||| |||||||| Sbjct: 2840 tggatggatttgaagc 2855
>emb|CR932957.2| Medicago truncatula chromosome 5 clone mth2-58c3, COMPLETE SEQUENCE Length = 136080 Score = 75.8 bits (38), Expect = 2e-10 Identities = 44/46 (95%) Strand = Plus / Minus Query: 350 tttgatgcttgtttcatggacatacaaatgccagaaatggatgggt 395 ||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 4315 tttgatgcttgcttcatggacattcaaatgccagaaatggatgggt 4270
>gb|AC146785.12| Medicago truncatula clone mth2-4h4, complete sequence Length = 149005 Score = 75.8 bits (38), Expect = 2e-10 Identities = 44/46 (95%) Strand = Plus / Plus Query: 350 tttgatgcttgtttcatggacatacaaatgccagaaatggatgggt 395 ||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 8381 tttgatgcttgcttcatggacattcaaatgccagaaatggatgggt 8426
>gb|AC004557.2|AC004557 Genomic sequence for Arabidopsis thaliana BAC F17L21 from chromosome I, complete sequence Length = 99690 Score = 73.8 bits (37), Expect = 6e-10 Identities = 61/69 (88%) Strand = Plus / Plus Query: 327 cattgctaaaaccacctcacagttttgatgcttgtttcatggacatacaaatgccagaaa 386 ||||||| || ||||||||| ||||||||||| ||||||||||| || |||||||||| Sbjct: 35492 cattgcttaagccacctcacgagtttgatgcttgcttcatggacattcagatgccagaaa 35551 Query: 387 tggatgggt 395 ||||||||| Sbjct: 35552 tggatgggt 35560
>emb|AJ630372.1| Cucurbita maxima mRNA for putative histidine kinase, frame shifted splice variant Length = 4063 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 349 ttttgatgcttgtttcatggacatacaaatgccagaaatggatgggtttga 399 |||||||||||| |||||||| || |||||||| ||||||||||||||||| Sbjct: 3403 ttttgatgcttgcttcatggatattcaaatgcctgaaatggatgggtttga 3453
>emb|AJ628045.1| Cucurbita maxima mRNA for putative histidine kinase Length = 3926 Score = 69.9 bits (35), Expect = 9e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 349 ttttgatgcttgtttcatggacatacaaatgccagaaatggatgggtttga 399 |||||||||||| |||||||| || |||||||| ||||||||||||||||| Sbjct: 3266 ttttgatgcttgcttcatggatattcaaatgcctgaaatggatgggtttga 3316
>gb|AC141922.19| Medicago truncatula clone mth2-9n11, complete sequence Length = 107448 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 341 cctcacagttttgatgcttgtttcatggacatacaaatgccagaaatggatgggt 395 ||||||| ||||||||||| |||||||| || ||||||||||||||||| |||| Sbjct: 53535 cctcacaagtttgatgcttgcttcatggatattcaaatgccagaaatggacgggt 53589 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Plus Query: 508 tggcaatgacagcagacgttatccaggcaacatatgagcactgtttgaaatgtgaaatgg 567 |||| ||||||||||| || ||||| || |||||||| | ||||||||||||| |||| Sbjct: 54078 tggccatgacagcagatgtaatccatgctacatatgaagagtgtttgaaatgtgggatgg 54137 Query: 568 atggctatgt 577 |||| ||||| Sbjct: 54138 atggttatgt 54147
>gb|AC144931.29| Medicago truncatula clone mth2-22b18, complete sequence Length = 122819 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 341 cctcacagttttgatgcttgtttcatggacatacaaatgccagaaatggatgggt 395 ||||||| ||||||||||| |||||||| || ||||||||||||||||| |||| Sbjct: 25070 cctcacaagtttgatgcttgcttcatggatattcaaatgccagaaatggacgggt 25124 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Plus Query: 508 tggcaatgacagcagacgttatccaggcaacatatgagcactgtttgaaatgtgaaatgg 567 |||| ||||||||||| || ||||| || |||||||| | ||||||||||||| |||| Sbjct: 25613 tggccatgacagcagatgtaatccatgctacatatgaagagtgtttgaaatgtgggatgg 25672 Query: 568 atggctatgt 577 |||| ||||| Sbjct: 25673 atggttatgt 25682
>gb|AC170800.5| Medicago truncatula clone mth2-32n7, complete sequence Length = 99712 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 341 cctcacagttttgatgcttgtttcatggacatacaaatgccagaaatggatgggt 395 ||||||| ||||||||||| |||||||| || ||||||||||||||||| |||| Sbjct: 43053 cctcacaagtttgatgcttgcttcatggatattcaaatgccagaaatggacgggt 43107 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Plus Query: 508 tggcaatgacagcagacgttatccaggcaacatatgagcactgtttgaaatgtgaaatgg 567 |||| ||||||||||| || ||||| || |||||||| | ||||||||||||| |||| Sbjct: 43596 tggccatgacagcagatgtaatccatgctacatatgaagagtgtttgaaatgtgggatgg 43655 Query: 568 atggctatgt 577 |||| ||||| Sbjct: 43656 atggttatgt 43665
>gb|AC142094.12| Medicago truncatula clone mth2-34h6, complete sequence Length = 151594 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 341 cctcacagttttgatgcttgtttcatggacatacaaatgccagaaatggatgggt 395 ||||||| ||||||||||| |||||||| || ||||||||||||||||| |||| Sbjct: 126525 cctcacaagtttgatgcttgcttcatggatattcaaatgccagaaatggacgggt 126471 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Minus Query: 508 tggcaatgacagcagacgttatccaggcaacatatgagcactgtttgaaatgtgaaatgg 567 |||| ||||||||||| || ||||| || |||||||| | ||||||||||||| |||| Sbjct: 125982 tggccatgacagcagatgtaatccatgctacatatgaagagtgtttgaaatgtgggatgg 125923 Query: 568 atggctatgt 577 |||| ||||| Sbjct: 125922 atggttatgt 125913
>emb|CR955006.2| Medicago truncatula chromosome 5 clone mth2-5i4, COMPLETE SEQUENCE Length = 108871 Score = 60.0 bits (30), Expect = 9e-06 Identities = 57/66 (86%) Strand = Plus / Minus Query: 330 tgctaaaaccacctcacagttttgatgcttgtttcatggacatacaaatgccagaaatgg 389 |||| |||||||| || | |||||||||||| |||||||| | |||||||||||||||| Sbjct: 106344 tgcttaaaccaccacataattttgatgcttgcttcatggatctccaaatgccagaaatgg 106285 Query: 390 atgggt 395 | |||| Sbjct: 106284 acgggt 106279
>emb|CT571263.1| Medicago truncatula chromosome 5 clone mte1-7c20, COMPLETE SEQUENCE Length = 127003 Score = 60.0 bits (30), Expect = 9e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 330 tgctaaaaccacctcacagttttgatgcttgtttcatggacatacaaatgccagaaatgg 389 |||| |||||||| || | |||||||||||| |||||||| | |||||||||||||||| Sbjct: 119002 tgcttaaaccaccacataattttgatgcttgcttcatggatctccaaatgccagaaatgg 119061 Query: 390 atgggt 395 | |||| Sbjct: 119062 acgggt 119067
>gb|AF398464.1| Marinomonas mediterranea protein kinase PpoS (ppoS) gene, complete cds Length = 2820 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 365 atggacatacaaatgccagaaatggatgg 393 ||||||||||||||||||||||||||||| Sbjct: 2227 atggacatacaaatgccagaaatggatgg 2255
>gb|AY092025.1| Catharanthus roseus cytokinin receptor (CKR1) mRNA, complete cds Length = 4040 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 350 tttgatgcttgtttcatggacatacaaatgccagaaatggatgggtttgaagc 402 ||||||||||| || ||||| | ||||||||||||||||| ||||||||||| Sbjct: 2884 tttgatgcttgctttatggatcttcaaatgccagaaatggacgggtttgaagc 2936
>dbj|AB206393.1| Zea mays ZmHK1b2 mRNA for histidine kinase, complete cds Length = 3033 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 358 ttgtttcatggacatacaaatgccagaaatggatgggtttgaagccaccaag 409 |||| |||||||||| || ||||| ||||||||||||||||| || |||||| Sbjct: 2709 ttgtctcatggacattcagatgcccgaaatggatgggtttgaggctaccaag 2760
>dbj|AB206392.1| Zea mays ZmHK1b1' mRNA for histidine kinase, complete cds Length = 3046 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 358 ttgtttcatggacatacaaatgccagaaatggatgggtttgaagccaccaag 409 |||| |||||||||| || ||||| |||||||||||||| || ||||||||| Sbjct: 2706 ttgtctcatggacattcagatgcccgaaatggatgggttcgaggccaccaag 2757
>gb|CP000282.1| Saccharophagus degradans 2-40, complete genome Length = 5057531 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 375 aaatgccagaaatggatgggtttgaagccac 405 ||||||| ||||||||||||||||||||||| Sbjct: 4631294 aaatgccggaaatggatgggtttgaagccac 4631324 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 365 atggacatacaaatgccagaaatggatgg 393 |||||||| || ||||||||||||||||| Sbjct: 330826 atggacatccacatgccagaaatggatgg 330854
>gb|AE010300.1| Leptospira interrogans serovar lai str. 56601 chromosome I, complete sequence Length = 4332241 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 366 tggacatacaaatgccagaaatggatgggtttgaa 400 ||||||||||||||||||| |||||||||| |||| Sbjct: 1737752 tggacatacaaatgccagagatggatgggtatgaa 1737786
>gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome I, complete sequence Length = 4277185 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 366 tggacatacaaatgccagaaatggatgggtttgaa 400 ||||||||||||||||||| |||||||||| |||| Sbjct: 2492435 tggacatacaaatgccagagatggatgggtatgaa 2492401
>ref|XM_637136.1| Dictyostelium discoideum histidine kinase (DDB0215358), partial mRNA Length = 5910 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 374 caaatgccagaaatggatgggtttgaagccacca 407 |||||||||||||||||||| |||||||| |||| Sbjct: 5671 caaatgccagaaatggatggatttgaagctacca 5704
>gb|AF024654.1|AF024654 Dictyostelium discoideum hybrid histidine kinase DHKB (dhkB) gene, complete cds Length = 7133 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Plus Query: 374 caaatgccagaaatggatgggtttgaagccacca 407 |||||||||||||||||||| |||||||| |||| Sbjct: 6809 caaatgccagaaatggatggatttgaagctacca 6842
>ref|NM_196042.1| Oryza sativa (japonica cultivar-group) putative histidine kinase (OSJNBa0073L01.1), mRNA Length = 3161 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Plus Query: 350 tttgatgcttgtttcatggacatacaaatgccagaaatggatgggtttgaagc 402 |||||||||||||| ||||| | || ||||| || ||||||||||||||||| Sbjct: 2518 tttgatgcttgttttatggatgttcagatgcctgagatggatgggtttgaagc 2570
>dbj|AB121445.1| Zea mays ZmHK3b mRNA for histidine kinase 3, complete cds Length = 4198 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 338 ccacctcacagttttgatgcttgtttcatggacatacaaatgccagaaatggatgggttt 397 |||||||||| ||||||||||| |||||||| | || ||||| || ||||| |||||| Sbjct: 3233 ccacctcacacatttgatgcttgcttcatggatgttcagatgcccgagatggacgggttt 3292 Query: 398 gaagc 402 ||||| Sbjct: 3293 gaagc 3297 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 558 tgtgaaatggatggctatgtctccaagccatttgaag 594 |||| ||||||||| ||||| || ||||||||||||| Sbjct: 3455 tgtggaatggatggatatgtgtcaaagccatttgaag 3491
>dbj|AB102957.1| Zea mays ZmHK3a mRNA for histidine kinase 3, complete cds Length = 4598 Score = 50.1 bits (25), Expect = 0.009 Identities = 55/65 (84%) Strand = Plus / Plus Query: 338 ccacctcacagttttgatgcttgtttcatggacatacaaatgccagaaatggatgggttt 397 |||||||||| ||||||||||| |||||||| | || ||||| || ||||| |||||| Sbjct: 3292 ccacctcacacatttgatgcttgcttcatggatgttcagatgcccgagatggacgggttt 3351 Query: 398 gaagc 402 ||||| Sbjct: 3352 gaagc 3356 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 558 tgtgaaatggatggctatgtctccaagccatttgaag 594 |||| ||||||||| ||||| || ||||||||||||| Sbjct: 3514 tgtggaatggatggatatgtgtcaaagccatttgaag 3550
>gb|DQ389162.1| Physcomitrella patens cytokinin receptor 1 (CRE1) gene, complete cds Length = 9447 Score = 48.1 bits (24), Expect = 0.034 Identities = 45/52 (86%) Strand = Plus / Plus Query: 344 cacagttttgatgcttgtttcatggacatacaaatgccagaaatggatgggt 395 |||| ||| ||||| ||||| |||||| | || ||||||||||||||||||| Sbjct: 8473 cacaatttcgatgcctgttttatggacgtgcagatgccagaaatggatgggt 8524 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 501 ccgatactggcaatgacagcagacgttat 529 ||||| |||||||||||||| |||||||| Sbjct: 8917 ccgatcctggcaatgacagctgacgttat 8945
>dbj|AB042270.1| Zea mays ZmHK1 mRNA for histidine kinase 1, complete cds Length = 3041 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 507 ctggcaatgacagcagacgttatccaggcaac 538 |||||||||||||| || |||||||||||||| Sbjct: 2852 ctggcaatgacagccgatgttatccaggcaac 2883
>gb|AY108856.1| Zea mays PCO066747 mRNA sequence Length = 936 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 507 ctggcaatgacagcagacgttatccaggcaac 538 |||||||||||||| || |||||||||||||| Sbjct: 652 ctggcaatgacagccgatgttatccaggcaac 683
>gb|DQ389163.1| Physcomitrella patens cytokinin receptor 2 (CRE2) gene, complete cds Length = 8401 Score = 46.1 bits (23), Expect = 0.13 Identities = 38/43 (88%) Strand = Plus / Plus Query: 353 gatgcttgtttcatggacatacaaatgccagaaatggatgggt 395 ||||| ||||| ||||| | |||||||||||||||||||||| Sbjct: 7362 gatgcctgttttatggatgtgcaaatgccagaaatggatgggt 7404
>ref|NM_122966.2| Arabidopsis thaliana AHK2 (ARABIDOPSIS HISTIDINE KINASE 2) AT5G35750 (AHK2) mRNA, complete cds Length = 3903 Score = 44.1 bits (22), Expect = 0.53 Identities = 76/94 (80%) Strand = Plus / Plus Query: 501 ccgatactggcaatgacagcagacgttatccaggcaacatatgagcactgtttgaaatgt 560 |||||| | |||||||||||||| ||||| ||||| || |||| | || |||||||| Sbjct: 3391 ccgatattagcaatgacagcagatgttattcaggctactcatgaagaatgcatgaaatgt 3450 Query: 561 gaaatggatggctatgtctccaagccatttgaag 594 | ||||||||| ||||| || || || ||||||| Sbjct: 3451 ggaatggatggttatgtatcaaaaccgtttgaag 3484 Score = 44.1 bits (22), Expect = 0.53 Identities = 43/50 (86%) Strand = Plus / Plus Query: 353 gatgcttgtttcatggacatacaaatgccagaaatggatgggtttgaagc 402 |||||||| |||||||| | || ||||| ||||||||||| |||||||| Sbjct: 3241 gatgcttgcttcatggatctccagatgcctgaaatggatggatttgaagc 3290
>emb|CR680649.2|CNS0FO51 Tetraodon nigroviridis full-length cDNA Length = 1339 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Plus Query: 387 tggatgggtttgaagccaccaagagaatca 416 ||||||| |||||||||||||||| ||||| Sbjct: 861 tggatggatttgaagccaccaagaaaatca 890
>gb|BT008407.1| Arabidopsis thaliana At5g35750 gene, complete cds Length = 1959 Score = 44.1 bits (22), Expect = 0.53 Identities = 76/94 (80%) Strand = Plus / Plus Query: 501 ccgatactggcaatgacagcagacgttatccaggcaacatatgagcactgtttgaaatgt 560 |||||| | |||||||||||||| ||||| ||||| || |||| | || |||||||| Sbjct: 1819 ccgatattagcaatgacagcagatgttattcaggctactcatgaagaatgcatgaaatgt 1878 Query: 561 gaaatggatggctatgtctccaagccatttgaag 594 | ||||||||| ||||| || || || ||||||| Sbjct: 1879 ggaatggatggttatgtatcaaaaccgtttgaag 1912 Score = 44.1 bits (22), Expect = 0.53 Identities = 43/50 (86%) Strand = Plus / Plus Query: 353 gatgcttgtttcatggacatacaaatgccagaaatggatgggtttgaagc 402 |||||||| |||||||| | || ||||| ||||||||||| |||||||| Sbjct: 1669 gatgcttgcttcatggatctccagatgcctgaaatggatggatttgaagc 1718
>gb|BT002530.1| Arabidopsis thaliana histidine kinase-like protein (At5g35750) mRNA, complete cds Length = 2347 Score = 44.1 bits (22), Expect = 0.53 Identities = 76/94 (80%) Strand = Plus / Plus Query: 501 ccgatactggcaatgacagcagacgttatccaggcaacatatgagcactgtttgaaatgt 560 |||||| | |||||||||||||| ||||| ||||| || |||| | || |||||||| Sbjct: 1839 ccgatattagcaatgacagcagatgttattcaggctactcatgaagaatgcatgaaatgt 1898 Query: 561 gaaatggatggctatgtctccaagccatttgaag 594 | ||||||||| ||||| || || || ||||||| Sbjct: 1899 ggaatggatggttatgtatcaaaaccgtttgaag 1932 Score = 44.1 bits (22), Expect = 0.53 Identities = 43/50 (86%) Strand = Plus / Plus Query: 353 gatgcttgtttcatggacatacaaatgccagaaatggatgggtttgaagc 402 |||||||| |||||||| | || ||||| ||||||||||| |||||||| Sbjct: 1689 gatgcttgcttcatggatctccagatgcctgaaatggatggatttgaagc 1738
>dbj|AK175733.1| Arabidopsis thaliana mRNA for histidine kinase (AHK2), complete cds, clone: RAFL22-27-P09 Length = 625 Score = 44.1 bits (22), Expect = 0.53 Identities = 76/94 (80%) Strand = Plus / Plus Query: 501 ccgatactggcaatgacagcagacgttatccaggcaacatatgagcactgtttgaaatgt 560 |||||| | |||||||||||||| ||||| ||||| || |||| | || |||||||| Sbjct: 127 ccgatattagcaatgacagcagatgttattcaggctactcatgaagaatgcatgaaatgt 186 Query: 561 gaaatggatggctatgtctccaagccatttgaag 594 | ||||||||| ||||| || || || ||||||| Sbjct: 187 ggaatggatggttatgtatcaaaaccgtttgaag 220
>dbj|AB011485.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MXH1 Length = 87210 Score = 44.1 bits (22), Expect = 0.53 Identities = 76/94 (80%) Strand = Plus / Minus Query: 501 ccgatactggcaatgacagcagacgttatccaggcaacatatgagcactgtttgaaatgt 560 |||||| | |||||||||||||| ||||| ||||| || |||| | || |||||||| Sbjct: 57786 ccgatattagcaatgacagcagatgttattcaggctactcatgaagaatgcatgaaatgt 57727 Query: 561 gaaatggatggctatgtctccaagccatttgaag 594 | ||||||||| ||||| || || || ||||||| Sbjct: 57726 ggaatggatggttatgtatcaaaaccgtttgaag 57693
>dbj|AB046869.1| Arabidopsis thaliana AHK2 mRNA for histidine kinase, complete cds Length = 3531 Score = 44.1 bits (22), Expect = 0.53 Identities = 76/94 (80%) Strand = Plus / Plus Query: 501 ccgatactggcaatgacagcagacgttatccaggcaacatatgagcactgtttgaaatgt 560 |||||| | |||||||||||||| ||||| ||||| || |||| | || |||||||| Sbjct: 3391 ccgatattagcaatgacagcagatgttattcaggctactcatgaagaatgcatgaaatgt 3450 Query: 561 gaaatggatggctatgtctccaagccatttgaag 594 | ||||||||| ||||| || || || ||||||| Sbjct: 3451 ggaatggatggttatgtatcaaaaccgtttgaag 3484 Score = 44.1 bits (22), Expect = 0.53 Identities = 43/50 (86%) Strand = Plus / Plus Query: 353 gatgcttgtttcatggacatacaaatgccagaaatggatgggtttgaagc 402 |||||||| |||||||| | || ||||| ||||||||||| |||||||| Sbjct: 3241 gatgcttgcttcatggatctccagatgcctgaaatggatggatttgaagc 3290
>ref|NM_130311.1| Arabidopsis thaliana CKI1 (CYTOKININ-INDEPENDENT 1); protein histidine kinase/ two-component response regulator AT2G47430 (CKI1) mRNA, complete cds Length = 3653 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 374 caaatgccagaaatggatgggtttgaagc 402 |||||||||||||||||||| | |||||| Sbjct: 3316 caaatgccagaaatggatggctatgaagc 3344
>gb|AC120366.9| Mus musculus chromosome 1, clone RP24-294P1, complete sequence Length = 156784 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 212 aagaggaaaatcattgtggtt 232 ||||||||||||||||||||| Sbjct: 54915 aagaggaaaatcattgtggtt 54895
>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome Length = 5237682 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 377 atgccagaaatggatgggtttgaag 401 ||||||||||||||||| ||||||| Sbjct: 567384 atgccagaaatggatggatttgaag 567408
>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome Length = 5227419 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 377 atgccagaaatggatgggtttgaag 401 ||||||||||||||||| ||||||| Sbjct: 578782 atgccagaaatggatggatttgaag 578806
>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome Length = 5228663 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 377 atgccagaaatggatgggtttgaag 401 ||||||||||||||||| ||||||| Sbjct: 578825 atgccagaaatggatggatttgaag 578849
>gb|AY286123.1| Cyanidioschyzon merolae DBV201 chloroplast, complete genome Length = 149705 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 381 cagaaatggatgggtttgaag 401 ||||||||||||||||||||| Sbjct: 131151 cagaaatggatgggtttgaag 131131
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 atgccagaaatggatgggttt 397 ||||||||||||||||||||| Sbjct: 4928863 atgccagaaatggatgggttt 4928883 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 377 atgccagaaatggatgggtttgaag 401 ||||| ||||||||||||||||||| Sbjct: 2216845 atgcccgaaatggatgggtttgaag 2216821
>gb|DQ180352.1| Vibrio cholerae integrating conjugative element ICEVchMex hypothetical protein (s073) gene, partial cds; hypothetical protein (mex03), hypothetical protein (mex04), hypothetical protein (mex05), putative response regulator (s074), and putative histidine kinase (s075) genes, complete cds; and TraF-like protein (traF) gene, partial cds Length = 9587 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 365 atggacatacaaatgccagaaatggatgg 393 ||||||||||||||||| | ||||||||| Sbjct: 5863 atggacatacaaatgccgggaatggatgg 5835
>gb|AC095038.3| Homo sapiens BAC clone RP11-10F11 from 7, complete sequence Length = 163666 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 73 gcataacttgaatgtaatcat 93 ||||||||||||||||||||| Sbjct: 124085 gcataacttgaatgtaatcat 124105
>gb|CP000001.1| Bacillus cereus E33L, complete genome Length = 5300915 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 377 atgccagaaatggatgggtttgaag 401 ||||||||||||||||| ||||||| Sbjct: 566155 atgccagaaatggatggatttgaag 566179
>emb|AL713888.10| Human DNA sequence from clone RP11-524O24 on chromosome 10 Contains the SLC25A16 gene for member 16 solute carrier family 25 (mitochondrial carrier; Graves disease autoantigen), a ribosomal protein L26 (RPL26) pseudogene, a novel pseudogene, the 5' end of the gene for leukemia-associated protein with a CXXC domain (LCX) and two CpG islands, complete sequence Length = 141221 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 gcataacttgaatgtaatcat 93 ||||||||||||||||||||| Sbjct: 135611 gcataacttgaatgtaatcat 135591
>gb|AY055428.1| Vibrio cholerae STX transposon-like element and pilus assembly region, complete sequence Length = 99483 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 365 atggacatacaaatgccagaaatggatgg 393 ||||||||||||||||| | ||||||||| Sbjct: 85108 atggacatacaaatgccgggaatggatgg 85080
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 atgccagaaatggatgggttt 397 ||||||||||||||||||||| Sbjct: 1649207 atgccagaaatggatgggttt 1649187
>dbj|AK121000.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023044K19, full insert sequence Length = 4802 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Plus Query: 350 tttgatgcttgtttcatggacatacaaatgccagaaatggatgggtttgaagc 402 |||||||||||||| ||||| | || |||| || ||||||||||||||||| Sbjct: 3904 tttgatgcttgttttatggatgttcagatgcttgagatggatgggtttgaagc 3956
>emb|AJ337337.1|HSA337337 Homo sapiens genomic sequence surrounding NotI site, clone NR5-DI13RS Length = 771 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 487 ggaggtggcgaactccgatactggc 511 ||||||||||| ||||||||||||| Sbjct: 575 ggaggtggcgagctccgatactggc 599
>dbj|AB002583.1| Cyanidioschyzon merolae chloroplast DNA, complete genome, strain:10D Length = 149987 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 381 cagaaatggatgggtttgaag 401 ||||||||||||||||||||| Sbjct: 84200 cagaaatggatgggtttgaag 84220
>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome Length = 5227293 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 377 atgccagaaatggatgggtttgaag 401 ||||||||||||||||| ||||||| Sbjct: 578782 atgccagaaatggatggatttgaag 578806
>gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome Length = 3184243 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 377 atgccagaaatggatgggtttgaagccac 405 |||||||| |||||||| ||||||||||| Sbjct: 3097174 atgccagagatggatggttttgaagccac 3097146
>dbj|D87545.1| Arabidopsis thaliana mRNA for histidine kinase homolog, complete cds Length = 3677 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 374 caaatgccagaaatggatgggtttgaagc 402 |||||||||||||||||||| | |||||| Sbjct: 3340 caaatgccagaaatggatggctatgaagc 3368
>dbj|AB024399.1| Cyanidioschyzon merolae chloroplast gene for FtsH (FtsHcp), complete cds Length = 1812 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 381 cagaaatggatgggtttgaag 401 ||||||||||||||||||||| Sbjct: 845 cagaaatggatgggtttgaag 865
>gb|AY600439.1| Lycopersicon esculentum ethylene receptor neverripe (ETR5) gene, complete cds Length = 5166 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 374 caaatgccagaaatggatgg 393 |||||||||||||||||||| Sbjct: 4939 caaatgccagaaatggatgg 4958
>gb|AC121870.2| Mus musculus chromosome 9 clone RP24-121D5, complete sequence Length = 191747 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 568 atggctatgtctccaagcca 587 |||||||||||||||||||| Sbjct: 27713 atggctatgtctccaagcca 27732
>gb|AE017197.1| Rickettsia typhi str. Wilmington complete genome Length = 1111496 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 383 gaaatggatgggtttgaagc 402 |||||||||||||||||||| Sbjct: 113974 gaaatggatgggtttgaagc 113955
>gb|AC140841.2| Mus musculus BAC clone RP24-470M20 from chromosome 9, complete sequence Length = 163348 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 568 atggctatgtctccaagcca 587 |||||||||||||||||||| Sbjct: 41134 atggctatgtctccaagcca 41115
>gb|AC130202.1| Mus musculus BAC clone RP24-480M3 from 9, complete sequence Length = 178779 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 tttgatgcttgtttcatgga 369 |||||||||||||||||||| Sbjct: 146049 tttgatgcttgtttcatgga 146030
>emb|CR733448.2|CNS0GSPJ Tetraodon nigroviridis full-length cDNA Length = 1050 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 387 tggatgggtttgaagccaccaaga 410 ||||||| |||||||||||||||| Sbjct: 564 tggatggatttgaagccaccaaga 587
>emb|CR732730.2|CNS0GSBI Tetraodon nigroviridis full-length cDNA Length = 1304 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 387 tggatgggtttgaagccaccaaga 410 ||||||| |||||||||||||||| Sbjct: 837 tggatggatttgaagccaccaaga 860
>emb|CR731394.2|CNS0GRAF Tetraodon nigroviridis full-length cDNA Length = 1327 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 387 tggatgggtttgaagccaccaaga 410 ||||||| |||||||||||||||| Sbjct: 844 tggatggatttgaagccaccaaga 867
>emb|CR731336.1|CNS0GR8T Tetraodon nigroviridis full-length cDNA Length = 1317 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 387 tggatgggtttgaagccaccaaga 410 ||||||| |||||||||||||||| Sbjct: 839 tggatggatttgaagccaccaaga 862
>emb|CR729418.2|CNS0GPRK Tetraodon nigroviridis full-length cDNA Length = 1325 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 387 tggatgggtttgaagccaccaaga 410 ||||||| |||||||||||||||| Sbjct: 842 tggatggatttgaagccaccaaga 865
>emb|CR725828.2|CNS0GMZU Tetraodon nigroviridis full-length cDNA Length = 1308 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 387 tggatgggtttgaagccaccaaga 410 ||||||| |||||||||||||||| Sbjct: 847 tggatggatttgaagccaccaaga 870
>emb|CR724671.2|CNS0GM3P Tetraodon nigroviridis full-length cDNA Length = 1323 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 387 tggatgggtttgaagccaccaaga 410 ||||||| |||||||||||||||| Sbjct: 843 tggatggatttgaagccaccaaga 866
>emb|CR723657.2|CNS0GLBJ Tetraodon nigroviridis full-length cDNA Length = 1326 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 387 tggatgggtttgaagccaccaaga 410 ||||||| |||||||||||||||| Sbjct: 842 tggatggatttgaagccaccaaga 865
>emb|CR723725.1|CNS0GLDF Tetraodon nigroviridis full-length cDNA Length = 1220 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 387 tggatgggtttgaagccaccaaga 410 ||||||| |||||||||||||||| Sbjct: 846 tggatggatttgaagccaccaaga 869
>emb|CR722798.2|CNS0GKNO Tetraodon nigroviridis full-length cDNA Length = 1326 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 387 tggatgggtttgaagccaccaaga 410 ||||||| |||||||||||||||| Sbjct: 848 tggatggatttgaagccaccaaga 871
>emb|CR710613.2|CNS0GB9D Tetraodon nigroviridis full-length cDNA Length = 615 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 387 tggatgggtttgaagccaccaaga 410 ||||||| |||||||||||||||| Sbjct: 134 tggatggatttgaagccaccaaga 157
>emb|CR696838.2|CNS0G0MQ Tetraodon nigroviridis full-length cDNA Length = 1293 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 387 tggatgggtttgaagccaccaaga 410 ||||||| |||||||||||||||| Sbjct: 815 tggatggatttgaagccaccaaga 838
>emb|CR693215.2|CNS0FXU3 Tetraodon nigroviridis full-length cDNA Length = 1145 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 387 tggatgggtttgaagccaccaaga 410 ||||||| |||||||||||||||| Sbjct: 815 tggatggatttgaagccaccaaga 838
>emb|CR692841.2|CNS0FXJP Tetraodon nigroviridis full-length cDNA Length = 1293 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 387 tggatgggtttgaagccaccaaga 410 ||||||| |||||||||||||||| Sbjct: 815 tggatggatttgaagccaccaaga 838
>emb|CR687890.2|CNS0FTQ6 Tetraodon nigroviridis full-length cDNA Length = 1317 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 387 tggatgggtttgaagccaccaaga 410 ||||||| |||||||||||||||| Sbjct: 839 tggatggatttgaagccaccaaga 862
>emb|CR685755.2|CNS0FS2V Tetraodon nigroviridis full-length cDNA Length = 1286 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 387 tggatgggtttgaagccaccaaga 410 ||||||| |||||||||||||||| Sbjct: 816 tggatggatttgaagccaccaaga 839
>emb|CR679957.2|CNS0FNLT Tetraodon nigroviridis full-length cDNA Length = 1281 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 387 tggatgggtttgaagccaccaaga 410 ||||||| |||||||||||||||| Sbjct: 816 tggatggatttgaagccaccaaga 839
>emb|CR673555.2|CNS0FIOP Tetraodon nigroviridis full-length cDNA Length = 1318 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 387 tggatgggtttgaagccaccaaga 410 ||||||| |||||||||||||||| Sbjct: 839 tggatggatttgaagccaccaaga 862
>emb|CR672596.2|CNS0FHY2 Tetraodon nigroviridis full-length cDNA Length = 1312 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 387 tggatgggtttgaagccaccaaga 410 ||||||| |||||||||||||||| Sbjct: 838 tggatggatttgaagccaccaaga 861
>emb|CR670139.2|CNS0FG1T Tetraodon nigroviridis full-length cDNA Length = 1294 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 387 tggatgggtttgaagccaccaaga 410 ||||||| |||||||||||||||| Sbjct: 815 tggatggatttgaagccaccaaga 838
>emb|CR665790.2|CNS0FCP0 Tetraodon nigroviridis full-length cDNA Length = 1320 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 387 tggatgggtttgaagccaccaaga 410 ||||||| |||||||||||||||| Sbjct: 839 tggatggatttgaagccaccaaga 862
>emb|CR663468.2|CNS0FAWI Tetraodon nigroviridis full-length cDNA Length = 1318 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 387 tggatgggtttgaagccaccaaga 410 ||||||| |||||||||||||||| Sbjct: 839 tggatggatttgaagccaccaaga 862
>emb|CR661954.2|CNS0F9QG Tetraodon nigroviridis full-length cDNA Length = 1317 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 387 tggatgggtttgaagccaccaaga 410 ||||||| |||||||||||||||| Sbjct: 839 tggatggatttgaagccaccaaga 862
>emb|CR661020.2|CNS0F90I Tetraodon nigroviridis full-length cDNA Length = 1253 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 387 tggatgggtttgaagccaccaaga 410 ||||||| |||||||||||||||| Sbjct: 816 tggatggatttgaagccaccaaga 839
>emb|CR660954.1|CNS0F8YO Tetraodon nigroviridis full-length cDNA Length = 1326 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 387 tggatgggtttgaagccaccaaga 410 ||||||| |||||||||||||||| Sbjct: 860 tggatggatttgaagccaccaaga 883
>emb|CR660030.2|CNS0F890 Tetraodon nigroviridis full-length cDNA Length = 1318 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 387 tggatgggtttgaagccaccaaga 410 ||||||| |||||||||||||||| Sbjct: 839 tggatggatttgaagccaccaaga 862
>emb|CR659714.2|CNS0F808 Tetraodon nigroviridis full-length cDNA Length = 1314 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 387 tggatgggtttgaagccaccaaga 410 ||||||| |||||||||||||||| Sbjct: 836 tggatggatttgaagccaccaaga 859
>emb|CR656997.2|CNS0F5WR Tetraodon nigroviridis full-length cDNA Length = 1340 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 387 tggatgggtttgaagccaccaaga 410 ||||||| |||||||||||||||| Sbjct: 861 tggatggatttgaagccaccaaga 884
>emb|CR656879.2|CNS0F5TH Tetraodon nigroviridis full-length cDNA Length = 1281 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 387 tggatgggtttgaagccaccaaga 410 ||||||| |||||||||||||||| Sbjct: 816 tggatggatttgaagccaccaaga 839
>emb|CR656845.2|CNS0F5SJ Tetraodon nigroviridis full-length cDNA Length = 1332 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 387 tggatgggtttgaagccaccaaga 410 ||||||| |||||||||||||||| Sbjct: 854 tggatggatttgaagccaccaaga 877
>gb|AE016828.2| Coxiella burnetii RSA 493, complete genome Length = 1995281 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 382 agaaatggatgggtttgaag 401 |||||||||||||||||||| Sbjct: 1303401 agaaatggatgggtttgaag 1303382
>gb|DQ424897.1| Striga asiatica histidine kinase SHK278 mRNA, complete cds Length = 3009 Score = 40.1 bits (20), Expect = 8.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 359 tgtttcatggacatacaaatgccagaaatggatgggtttgaagc 402 ||||| ||||| || |||||||| || ||||| ||||||||||| Sbjct: 2701 tgttttatggatattcaaatgccggagatggacgggtttgaagc 2744
>emb|BX914203.24| Zebrafish DNA sequence from clone CH211-22E19 in linkage group 11, complete sequence Length = 179563 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 413 atcagaatgatggaaagaga 432 |||||||||||||||||||| Sbjct: 61190 atcagaatgatggaaagaga 61171
>gb|AC114550.4| Homo sapiens chromosome 8, clone CTD-3023L14, complete sequence Length = 159903 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 76 taacttgaatgtaatcatga 95 |||||||||||||||||||| Sbjct: 65923 taacttgaatgtaatcatga 65942
>gb|AC007112.6| Arabidopsis thaliana chromosome 2 clone F24C20 map mi398, complete sequence Length = 96371 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 323 attgcattgctaaaaccacctcac 346 ||||||||||||||||||| |||| Sbjct: 6236 attgcattgctaaaaccacgtcac 6259
>gb|AC099670.2| Homo sapiens chromosome 1 clone RP11-84O12, complete sequence Length = 171226 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 acagtgggaagaaagcaatt 325 |||||||||||||||||||| Sbjct: 113452 acagtgggaagaaagcaatt 113433
>gb|AF118844.1|AF118844 Lycopersicon esculentum ethylene receptor homolog (ETR5) mRNA, complete cds Length = 3370 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 374 caaatgccagaaatggatgg 393 |||||||||||||||||||| Sbjct: 2757 caaatgccagaaatggatgg 2776
>dbj|AP001533.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-788M5, complete sequence Length = 207183 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 66 ccagggagcataacttgaatgtaatcat 93 |||| |||| |||||||||||||||||| Sbjct: 128464 ccagagagcttaacttgaatgtaatcat 128437
>gb|AC005922.1|AC005922 Homo sapiens chromosome 17, clone hRPK.235_I_10, complete sequence Length = 140677 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 382 agaaatggatgggtttgaag 401 |||||||||||||||||||| Sbjct: 71302 agaaatggatgggtttgaag 71283
>dbj|BA000021.3| Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis DNA, complete genome Length = 697724 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 382 agaaatggatgggtttgaag 401 |||||||||||||||||||| Sbjct: 273269 agaaatggatgggtttgaag 273250 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,462,875 Number of Sequences: 3902068 Number of extensions: 5462875 Number of successful extensions: 96526 Number of sequences better than 10.0: 113 Number of HSP's better than 10.0 without gapping: 110 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 96034 Number of HSP's gapped (non-prelim): 485 length of query: 609 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 586 effective length of database: 17,143,297,704 effective search space: 10045972454544 effective search space used: 10045972454544 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
