Clone Name	basd23p13
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar N...	569	e-159
2	gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA...	569	e-159
3	gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-1...	569	e-159
4	gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3	569	e-159
5	gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genom...	569	e-159
6	emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chlor...	569	e-159
7	emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4,...	569	e-159
8	emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4,...	569	e-159
9	dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...	569	e-159
10	dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D...	569	e-159
11	dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D...	569	e-159
12	dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...	569	e-159
13	gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 gen...	569	e-159
14	dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic D...	569	e-159
15	dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clon...	569	e-159
16	dbj|AK105766.1| Oryza sativa (japonica cultivar-group) cDNA clon...	569	e-159
17	dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clon...	569	e-159
18	dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clon...	569	e-159
19	dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clon...	569	e-159
20	gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome...	569	e-159
21	dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome	569	e-159
22	dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome	569	e-159
23	gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome...	561	e-157
24	gb|AY694134.1| Pennisetum glaucum clone PGP005 23S ribosomal RNA...	561	e-157
25	gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast,...	561	e-157
26	gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar N...	561	e-157
27	gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene,...	561	e-157
28	gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome	561	e-157
29	dbj|AK105825.1| Oryza sativa (japonica cultivar-group) cDNA clon...	561	e-157
30	dbj|AK105692.1| Oryza sativa (japonica cultivar-group) cDNA clon...	561	e-157
31	dbj|AK058658.1| Oryza sativa (japonica cultivar-group) cDNA clon...	561	e-157
32	dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clon...	561	e-157
33	dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete ...	561	e-157
34	gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genom...	553	e-154
35	gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome...	553	e-154
36	gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, c...	553	e-154
37	dbj|AK071923.1| Oryza sativa (japonica cultivar-group) cDNA clon...	551	e-154
38	emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome	545	e-152
39	emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon	545	e-152
40	emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribo...	545	e-152
41	gb|DQ078770.1| Zea mays clone Zmcoi6.13 cold-inducible unknown mRNA	523	e-146
42	gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence	504	e-140
43	gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence	504	e-140
44	dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, co...	504	e-140
45	gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, ...	496	e-137
46	emb|X06235.1|MIOBRRNP Oenothera berteriana mitDNA with part of p...	496	e-137
47	gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloropl...	488	e-135
48	gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, ...	488	e-135
49	emb|AJ879453.1| Acorus calamus chloroplast, complete genome	480	e-132
50	gb|DQ481232.1| Populus suaveolens unknown gene	472	e-130
51	emb|AJ627251.1| Nymphaea alba chloroplast, complete genome	472	e-130
52	emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomi...	472	e-130
53	gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, comp...	464	e-128
54	gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast...	464	e-128
55	emb|AJ970307.1| Cucumis sativus chloroplast complete genome	464	e-128
56	gb|AY582139.1| Panax ginseng chloroplast, complete genome	464	e-128
57	gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid...	464	e-128
58	dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome	464	e-128
59	dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clon...	460	e-126
60	emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA	456	e-125
61	emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complet...	456	e-125
62	emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloropl...	456	e-125
63	gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-2...	456	e-125
64	gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosom...	456	e-125
65	gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA ...	456	e-125
66	dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete s...	456	e-125
67	dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast ...	456	e-125
68	dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, compl...	456	e-125
69	gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, c...	452	e-124
70	emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome	452	e-124
71	gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloropla...	452	e-124
72	gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, ...	452	e-124
73	gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome	452	e-124
74	emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast ...	448	e-123
75	gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare str...	448	e-123
76	gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome	448	e-123
77	dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clon...	448	e-123
78	dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome	448	e-123
79	gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA...	448	e-123
80	dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complet...	448	e-123
81	gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes	440	e-120
82	gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete se...	432	e-118
83	gb|AC093544.8| Medicago truncatula chloroplast, complete genome,...	432	e-118
84	gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, compl...	424	e-116
85	emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single r...	424	e-116
86	gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA	424	e-116
87	gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5...	418	e-114
88	gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA ...	418	e-114
89	gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rr...	418	e-114
90	dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, comple...	418	e-114
91	dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete ge...	418	e-114
92	dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S rib...	418	e-114
93	gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, comple...	416	e-113
94	gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl)...	416	e-113
95	emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA	408	e-111
96	gb|AY660566.1| Huperzia lucidula chloroplast, complete genome	408	e-111
97	gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (r...	408	e-111
98	gb|AF322910.1|AF322910 Vigna radiata 23S ribosomal RNA, partial ...	402	e-109
99	gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, co...	402	e-109
100	gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete ge...	396	e-107
101	emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon...	396	e-107
102	gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete g...	369	3e-99
103	dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome	361	8e-97
104	emb|X59768.1|CA23SRR C.americana 23S rRNA gene	351	8e-94
105	gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (...	351	8e-94
106	gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (...	351	8e-94
107	gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl)...	351	8e-94
108	dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete g...	347	1e-92
109	dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...	345	5e-92
110	gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome...	345	5e-92
111	emb|BX000560.1|CNS08CE6 Oryza sativa chromosome 12, . BAC OSJNBa...	345	5e-92
112	gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subuni...	341	7e-91
113	emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5...	339	3e-90
114	dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...	339	3e-90
115	dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic D...	339	3e-90
116	emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ...	337	1e-89
117	gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (...	335	5e-89
118	gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome	329	3e-87
119	emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast ...	329	3e-87
120	gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete ...	325	4e-86
121	gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal...	317	1e-83
122	gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (r...	317	1e-83
123	gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, com...	307	1e-80
124	gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal R...	303	2e-79
125	dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clon...	303	2e-79
126	gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (...	280	2e-72
127	gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RN...	280	2e-72
128	gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit riboso...	264	1e-67
129	gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subun...	260	2e-66
130	gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl...	260	2e-66
131	gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal ...	254	1e-64
132	gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, comple...	254	1e-64
133	gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast lar...	252	5e-64
134	gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosoma...	250	2e-63
135	gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (...	250	2e-63
136	gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribos...	242	5e-61
137	gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome	242	5e-61
138	gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subu...	236	3e-59
139	gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome	230	2e-57
140	emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gen...	228	8e-57
141	emb|AM084275.1| Cyanoptyche gloeocystis cyanelle 16S rRNA gene (...	228	8e-57
142	gb|L42986.1|RTCCPRGOLA Carteria lunzensis	226	3e-56
143	gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subun...	226	3e-56
144	dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complet...	226	3e-56
145	dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome	226	3e-56
146	gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal R...	224	1e-55
147	gb|L43356.1|CRECPRRNLG Chlamydomonas zebra chloroplast large sub...	220	2e-54
148	emb|X68919.1|CHCZRRNL1 Chloroplast Chlamydomonas zebra rrnL gene...	220	2e-54
149	gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, comp...	218	7e-54
150	emb|AM084274.1| Glaucocystis nostochinearum cyanelle 16S rRNA ge...	216	3e-53
151	emb|AM084276.1| Compsopogon coeruleus chloroplast 16S rRNA gene ...	214	1e-52
152	gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete g...	210	2e-51
153	gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subu...	210	2e-51
154	gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ...	210	2e-51
155	emb|Z18289.1|PPC16SRNA Palmaria palmata Chloroplast for 16SrRNA ...	210	2e-51
156	tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloropl...	208	7e-51
157	emb|X16686.1|CHCR7S3S C. reinhardtii plastid DNA for 7S, 3S and ...	208	7e-51
158	emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL ...	208	7e-51
159	gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subun...	206	3e-50
160	gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (...	206	3e-50
161	gb|L43500.1|RTCCPRRNL Carteria olivieri	204	1e-49
162	gb|L43351.1|CRECPRRNLB Chlamydomonas agloeformis chloroplast lar...	204	1e-49
163	gb|L42987.1|RTCCPRGOLB Carteria radiosa large subunit ribosomal ...	204	1e-49
164	gb|L42858.1|CRECPRGOLA Chlamydomonas gigantea large subunit ribo...	202	4e-49
165	dbj|AK119524.1| Oryza sativa (japonica cultivar-group) cDNA clon...	198	7e-48
166	gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large s...	196	3e-47
167	gb|L42850.1|PMKCPRGOL Pleurastrum terrestre large subunit riboso...	196	3e-47
168	gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosoma...	194	1e-46
169	gb|L42984.1|ANKCPRGOL Ankistrodesmus stipitatus chloroplast larg...	194	1e-46
170	gb|L42845.1|FRICPRGOL Friedmannia israeliensis large subunit rib...	194	1e-46
171	gb|L43503.1|CRECPRRNLL Chlamydomonas pallidostigmatica chloropla...	192	4e-46
172	emb|X68899.1|CHCPRRNX1 Chloroplast Chlamydomonas pallidostigmati...	192	4e-46
173	gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete g...	190	2e-45
174	gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast,...	190	2e-45
175	gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome	190	2e-45
176	gb|L49156.1|PDICPRGOL Pediastrum biradiatum chloroplast large-su...	190	2e-45
177	gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit riboso...	190	2e-45
178	emb|AJ245645.1|PWI245645 Prototheca wickerhamii chloroplast part...	188	7e-45
179	gb|AY835431.1| Pseudendoclonium akinetum chloroplast, complete g...	188	7e-45
180	gb|L42851.1|PTOCPRGOL Prototheca wickerhamii large subunit ribos...	188	7e-45
181	gb|L43352.1|CRECPRRNLC Chlamydomonas frankii chloroplast large s...	186	3e-44
182	gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribo...	186	3e-44
183	gb|AF393599.1| Klebsormidium subtilissimum large subunit ribosom...	186	3e-44
184	gb|AF393598.1| Klebsormidium flaccidum small subunit ribosomal R...	186	3e-44
185	dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete...	186	3e-44
186	emb|X68906.1|CHCFRRNL2 Chloroplast Chlamydomonas frankii rrnL ge...	186	3e-44
187	gb|DQ174248.1| Phaeodactylum tricornutum 16S ribosomal RNA, tRNA...	184	1e-43
188	gb|L49148.1|CRECPRGOLF Chlamydomonas mexicana chloroplast large ...	184	1e-43
189	dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete g...	184	1e-43
190	gb|L42985.1|RTCCPRGOL Carteria crucifera large subunit ribosomal...	184	1e-43
191	emb|X00512.1|ANRN03 Anacystis nidulans 23S rRNA gene and flankin...	184	1e-43
192	emb|X68910.1|CHCMRRNL1 Chloroplast Chlamydomonas mexicana rrnL g...	184	1e-43
193	gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome	184	1e-43
194	gb|AY584525.1| Plectonema terebrans strain CCAP 1463-4 23S ribos...	182	4e-43
195	gb|L42860.1|CGZCPRGOL Chlorogonium elongatum chloroplast large-s...	182	4e-43
196	gb|L49151.1|HAKCPRGOL Haematococcus lacustris chloroplast large-...	180	2e-42
197	gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large ...	180	2e-42
198	gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large sub...	180	2e-42
199	emb|X68928.1|CHCKRRNL2 Chloroplast Chlamydomonas komma rrnL gene...	180	2e-42
200	gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome	180	2e-42
201	gb|L44126.1|SFFCPRGOL Scherffelia dubia chloroplast large-subuni...	178	6e-42
202	gb|L42992.1|TESCPRGOL Tetraselmis carteriiformis large subunit r...	178	6e-42
203	gb|AF393609.1| Scherffelia dubia small subunit ribosomal RNA (rr...	178	6e-42
204	gb|AF041468.1| Guillardia theta complete plastid genome	178	6e-42
205	gb|DQ275466.1| Arachis hypogaea clone PNDI 1 unknown RNA	178	6e-42
206	emb|Z67753.1|OSCHLPLXX Odontella sinensis complete chloroplast g...	176	3e-41
207	gb|L49157.1|STXCPRGOL Stigeoclonium helveticum chloroplast large...	176	3e-41
208	gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete g...	174	1e-40
209	gb|AY033310.1| Uncultured Prochlorococcus sp. MB11F02 16S riboso...	174	1e-40
210	gb|AY033307.1| Uncultured Prochlorococcus sp. MB11E08 16S riboso...	174	1e-40
211	gb|AY033297.1| Uncultured Synechococcus sp. MB11A04 16S ribosoma...	174	1e-40
212	gb|DQ366719.1| Uncultured Prochlorococcus marinus clone ASNC729 ...	174	1e-40
213	gb|DQ366714.1| Uncultured Prochlorococcus marinus clone ASNC2150...	174	1e-40
214	emb|BX572090.1| Prochlorococcus marinus MED4 complete genome; se...	174	1e-40
215	gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal ...	174	1e-40
216	gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rr...	174	1e-40
217	gb|L43540.1|DUNCPRRNL Dunaliella parva	172	4e-40
218	emb|X61179.1|CHPLIB P.littoralis chloroplast DNA for 23S rRNA (p...	172	4e-40
219	gb|AY673996.1| Gracilaria tenuistipitata var. liui chloroplast, ...	170	2e-39
220	gb|AY584526.1| Leptolyngbya boryana PCC 6306 23S ribosomal RNA g...	170	2e-39
221	gb|AY584520.1| Leptolyngbya sp. PCC 7410 23S ribosomal RNA gene,...	170	2e-39
222	gb|AY008341.1| Trichosarcina mucosa large subunit ribosomal RNA ...	170	2e-39
223	gb|L42837.1|CMKCPRGOL Chamaetrichon capsulatum large subunit rib...	170	2e-39
224	gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ri...	170	2e-39
225	gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subu...	168	6e-39
226	gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subu...	168	6e-39
227	gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subu...	168	6e-39
228	gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subu...	168	6e-39
229	gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subu...	168	6e-39
230	gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subu...	168	6e-39
231	gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subu...	168	6e-39
232	gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subu...	168	6e-39
233	gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subun...	168	6e-39
234	gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subun...	168	6e-39
235	gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subun...	168	6e-39
236	gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subun...	168	6e-39
237	gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subun...	168	6e-39
238	gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subun...	168	6e-39
239	gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subun...	168	6e-39
240	gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subun...	168	6e-39
241	gb|AY741371.1| Emiliania huxleyi strain CCMP 373 chloroplast, co...	168	6e-39
242	gb|L43538.1|CRECPRRNLA Chlamydomonas peterfii chloroplast large ...	168	6e-39
243	gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, comp...	168	6e-39
244	emb|X68887.1|CHCPRRNL1 Chloroplast Chlamydomonas peterfii rrnL g...	168	6e-39
245	emb|BX572100.1| Prochlorococcus marinus MIT9313 complete genome;...	167	2e-38
246	emb|BX572095.1| Prochlorococcus marinus MIT9313 complete genome;...	167	2e-38
247	gb|L43353.1|CRECPRRNLD Chlamydomonas geitleri chloroplast large ...	167	2e-38
248	dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clon...	167	2e-38
249	emb|X68891.1|CHCGRRNL1 Chloroplast Chlamydomonas geitleri rrnL g...	167	2e-38
250	gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1...	167	2e-38
251	gb|L42988.1|CRECPRGOLB Chlamydomonas applanata large subunit rib...	165	1e-37
252	dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...	165	1e-37
253	dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome	165	1e-37
254	dbj|AP005875.2| Oryza sativa (japonica cultivar-group) genomic D...	165	1e-37
255	gb|AY584507.1| Euhalothece sp. BAA001 23S ribosomal RNA gene, pa...	161	1e-36
256	gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome	161	1e-36
257	gb|L42859.1|CRECPRGOL Chlamydomonas mutabilis chloroplast large-...	161	1e-36
258	dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome	161	1e-36
259	gb|CP000110.1| Synechococcus sp. CC9605, complete genome	159	6e-36
260	gb|CP000097.1| Synechococcus sp. CC9902, complete genome	159	6e-36
261	emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segmen...	159	6e-36
262	gb|L42991.1|CRECPRGOLE Chlamydomonas radiata chloroplast large s...	159	6e-36
263	gb|L42847.1|MIQCPRGOL Micromonas pusilla large subunit ribosomal...	159	6e-36
264	gb|AY584517.1| Gloeobacter violaceus strain PCC 7421 23S ribosom...	157	2e-35
265	gb|L43541.1|PDWCPRRNL Pedinomonas tuberculata chloroplast large-...	157	2e-35
266	gb|L42993.1|URMCPRGOL Uronema belkae large subunit ribosomal RNA...	157	2e-35
267	gb|M36158.1|CHLCPG C.ellipsoidea chloroplast 23S ribosomal RNA g...	157	2e-35
268	gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome	153	4e-34
269	gb|L43355.1|CRECPRRNLF Chlamydomonas pseudopertusa chloroplast l...	151	1e-33
270	gb|AY335547.1| Aphanizomenon ovalisporum strain ILC-146 16S ribo...	149	6e-33
271	gb|AY305264.1| Cucumis melo clone M6-L12 orf124, orf118, tRNA-Me...	149	6e-33
272	emb|Z15152.1|CHCPRRNL Chloroplast Chlamydomonas pitschmannii rrn...	149	6e-33
273	gb|AY330885.1| Cynomorium coccineum clone Cyno_16 23S large subu...	147	2e-32
274	gb|L42990.1|CRECPRGOLD Chlamydomonas nivalis chloroplast large-s...	147	2e-32
275	gb|L43504.1|CRECPRRNLM Chlamydomonas starrii chloroplast large s...	145	9e-32
276	gb|L43354.1|CRECPRRNLE Chlamydomonas iyengarii chloroplast large...	145	9e-32
277	emb|X68889.1|CHCSRRNL1 Chloroplast Chlamydomonas starrii rrnL ge...	145	9e-32
278	emb|X68885.1|CHCIRRNL1 Chloroplast Chlamydomonas iyengarii rrnL ...	145	9e-32
279	gb|AY584524.1| Microcoleus sp. strain PCC 8701 23S ribosomal RNA...	143	3e-31
280	gb|L43539.1|CRECPRRNL Chlamydomonas sp. (SAG 66.72) chloroplast ...	143	3e-31
281	emb|X68924.1|CHCSRRNX2 Chloroplast Chlamydomonas sp. 66.72 rrnL ...	143	3e-31
282	emb|AM084273.1| Paulinella chromatophora plastid 16S rRNA gene (...	143	3e-31
283	gb|AF355761.1| Rhizophora stylosa 23S ribosomal RNA gene, comple...	141	1e-30
284	dbj|AP002541.2| Oryza sativa (japonica cultivar-group) genomic D...	141	1e-30
285	dbj|AP002868.1| Oryza sativa (japonica cultivar-group) genomic D...	141	1e-30
286	gb|L42989.1|CRECPRGOLC Chlamydomonas humicola chloroplast large-...	139	5e-30
287	gb|L42862.1|PNFCPRGOL Pycnococcus sp. CCMP 1203 large subunit ri...	139	5e-30
288	gb|AF022186.2|AF022186 Cyanidium caldarium strain RK1 chloroplas...	139	5e-30
289	gb|AF355762.1| Ceriops tagal 23S ribosomal RNA gene, complete se...	139	5e-30
290	emb|X68921.1|CHCHRRNL1 Chloroplast Chlamydomonas humicola rrnL g...	139	5e-30
291	gb|AY033308.1| Uncultured Synechococcus sp. MB11E09 16S ribosoma...	137	2e-29
292	gb|AY333417.1| Microcystis sp. 'Brown' 16S ribosomal RNA gene, p...	135	9e-29
293	gb|AY584523.1| Microcystis sp. strain PCC 7820 23S ribosomal RNA...	135	9e-29
294	gb|AY584521.1| Leptolyngbya sp. PCC 7104 23S ribosomal RNA gene,...	135	9e-29
295	gb|AY584512.1| Anabaena variabilis strain ATCC 29413 23S ribosom...	131	1e-27
296	gb|AY584508.1| Anabaena sphaerica strain UUTEX B 1616 23S riboso...	131	1e-27
297	gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, comple...	131	1e-27
298	gb|L44123.1|CMJCPRGOL Chlorococcum echinozygotum chloroplast lar...	131	1e-27
299	dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome	131	1e-27
300	gb|AY584510.1| Anabaena sp. strain PCC 9109 23S ribosomal RNA ge...	129	5e-27
301	gb|AF355764.1| Rhizophora mangle 23S ribosomal RNA gene, complet...	129	5e-27
302	gb|AY336134.1| Microcystis sp. MGccsy2 16S ribosomal RNA gene, p...	127	2e-26
303	gb|AY584522.1| Lyngbya aestuarii PCC 7419 23S ribosomal RNA gene...	127	2e-26
304	gb|AY584516.1| Lyngbya majuscula str. CCAP 1446/4 23S ribosomal ...	127	2e-26
305	gb|AY584515.1| Oscillatoria sp. strain CCAP 1459/13 23S ribosoma...	127	2e-26
306	gb|AY286123.1| Cyanidioschyzon merolae DBV201 chloroplast, compl...	123	3e-25
307	emb|X68896.1|CHCIRRNX4 Chloroplast Chlamydomonas indica rrnL gen...	123	3e-25
308	emb|X68915.1|CHCMRRNX3 Chloroplast C.moewusii rrnL gene, exon 3	123	3e-25
309	dbj|AB002583.1| Cyanidioschyzon merolae chloroplast DNA, complet...	123	3e-25
310	emb|Z17234.1|CHCERRNL Chloroplast Chlamydomonas eugametos rrnL gene	123	3e-25
311	gb|AY584514.1| Oscillatoria sp. strain CCAP 1459/26 23S ribosoma...	121	1e-24
312	gb|L44124.1|MNXCPRGOL Monomastix sp. (M722) chloroplast large-su...	119	5e-24
313	gb|L49155.1|NEHCPRGOLA Neochloris aquatica chloroplast large-sub...	119	5e-24
314	gb|L49154.1|MNXCPRGOLA Monomastix sp. OKE-1 large subunit riboso...	119	5e-24
315	dbj|AB182581.1| Mycoplasma hyorhinis gene for 23S ribosomal RNA,...	117	2e-23
316	gb|AF355766.1| Amaranthus hypochondriacus 23S ribosomal RNA gene...	115	8e-23
317	gb|AE017263.1| Mesoplasma florum L1 complete genome	111	1e-21
318	emb|AJ222802.1|CHPW5KB Prototheca wickerhamii 5.0 kb plastid DNA...	111	1e-21
319	gb|DQ319068.1| Spiroplasma kunkelii 16S ribosomal RNA gene, 16S-...	111	1e-21
320	gb|AE017308.1| Mycoplasma mobile 163K complete genome	109	5e-21
321	gb|AF443617.2| Mycoplasma hominis thiamine biosynthesis protein ...	109	5e-21
322	gb|AF443616.2| Mycoplasma hominis DNA-dependent RNA polymerase a...	109	5e-21
323	emb|X70810.2|CLEGCGA Euglena gracilis chloroplast complete genome	107	2e-20
324	dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D...	107	2e-20
325	dbj|AP005769.3| Oryza sativa (japonica cultivar-group) genomic D...	107	2e-20
326	emb|X13310.1|CHEG23S Euglena gracilis chloroplast 23S ribosomal ...	107	2e-20
327	emb|X76084.1|CHNERRNA N.eucaryotum chloroplast 16S rRNA, tRNA-Il...	107	2e-20
328	emb|X12890.1|CHEGRRNC Euglena gracilis rrnC operon containing 16...	107	2e-20
329	gb|L43359.1|PZTCPRRNL Pterosperma cristatum large subunit riboso...	105	8e-20
330	gb|AY055378.1| Mycoplasma hominis strain PG21 23S ribosomal RNA ...	101	1e-18
331	emb|AL445565.1|MPULM03 Mycoplasma pulmonis (strain UAB CTIP) com...	101	1e-18
332	gb|AF277191.1|AF277191 Homo sapiens PNAS-133 mRNA, partial sequence	101	1e-18
333	gb|AY584513.1| Nodularia harveyana strain CCAP 1452/1 23S riboso...	100	5e-18
334	gb|AC005724.3| Arabidopsis thaliana chromosome 2 clone MSF3 map ...	100	5e-18
335	gb|AC003673.3| Arabidopsis thaliana chromosome 2 clone F19F24 ma...	100	5e-18
336	dbj|AP006627.1| Bacillus clausii KSM-K16 DNA, complete genome	98	2e-17
337	emb|BX842643.1| Mycoplasma mycoides subsp. mycoides SC genomic D...	96	7e-17
338	emb|BX842642.1| Mycoplasma mycoides subsp. mycoides SC genomic D...	96	7e-17
339	gb|AF355765.1| Amaranthus hybridus 23S ribosomal RNA gene, compl...	96	7e-17
340	gb|U77679.1|GMU77679 Glycine max asparagine synthetase 1 (AS1) m...	96	7e-17
341	emb|AJ294725.1|ALO294725 Astasia longa complete chloroplast genome	92	1e-15
342	gb|AC150251.1| Uncultured bacterium zdt-33i5 clone zdt-33i5, com...	92	1e-15
343	dbj|AP002845.3| Oryza sativa (japonica cultivar-group) genomic D...	92	1e-15
344	dbj|AP002882.2| Oryza sativa (japonica cultivar-group) genomic D...	92	1e-15
345	emb|AJ879820.1| Uncultured organism 23S rRNA gene, clone LP4-62	92	1e-15
346	dbj|BA000042.1| Nicotiana tabacum mitochondrial DNA, complete ge...	92	1e-15
347	emb|X68424.1|BG23SRRN B.globisporus gene for 23S rRNA	90	5e-15
348	gb|AC104277.2| Oryza sativa (japonica cultivar-group) chromosome...	88	2e-14
349	gb|DQ398104.1| Helicosporidium sp. ex Simulium jonesii plastid, ...	88	2e-14
350	gb|CP000123.1| Mycoplasma capricolum subsp. capricolum ATCC 2734...	88	2e-14
351	gb|AF263557.1| Secondary endosymbiont of Bactericera cockerelli ...	88	2e-14
352	dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...	88	2e-14
353	gb|AE017245.1| Mycoplasma synoviae 53, complete genome	86	7e-14
354	dbj|AB181958.1| Heterosigma akashiwo chloroplast genes for 16S r...	86	7e-14
355	dbj|AB181955.1| Heterosigma akashiwo chloroplast genes for 16S r...	86	7e-14
356	gb|AY848693.1| Vitis pseudoreticulata clone EST-4 23S ribosomal ...	84	3e-13
357	dbj|AB181957.1| Heterosigma akashiwo chloroplast genes for 16S r...	84	3e-13
358	dbj|AB109771.1| Finegoldia magna rrnC operon, complete sequence	84	3e-13
359	dbj|AB109770.1| Finegoldia magna rrnB operon (16S rRNA, 23S rRNA...	84	3e-13
360	dbj|AB109769.1| Finegoldia magna rrnA operon (16S rRNA, 23S rRNA...	84	3e-13
361	dbj|AB109772.2| Finegoldia magna rrnD operon, complete sequence	84	3e-13
362	gb|AC157348.25| Medicago truncatula clone mth2-133e20, complete ...	82	1e-12
363	dbj|AB181956.1| Heterosigma akashiwo chloroplast genes for 16S r...	82	1e-12
364	gb|CP000089.1| Dechloromonas aromatica RCB, complete genome	80	4e-12
365	gb|AY957976.1| Candidatus Accumulibacter phosphatis RC31 23S rib...	80	4e-12
366	gb|AY957974.1| Candidatus Accumulibacter phosphatis RC111 23S ri...	80	4e-12
367	gb|AY957972.1| Candidatus Accumulibacter phosphatis RC102 23S ri...	80	4e-12
368	gb|AY957970.1| Candidatus Accumulibacter phosphatis RC99 23S rib...	80	4e-12
369	gb|AY957964.1| Candidatus Accumulibacter phosphatis RC26 23S rib...	80	4e-12
370	gb|AY957962.1| Uncultured beta proteobacterium RC19 23S ribosoma...	80	4e-12
371	gb|AY957960.1| Candidatus Accumulibacter phosphatis RC29 16S rib...	80	4e-12
372	gb|AY957958.1| Uncultured beta proteobacterium RC62 16S ribosoma...	80	4e-12
373	gb|S43424.1| 23S ribosomal RNA [Bacillus stearothermophilus, NCD...	80	4e-12
374	dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete ge...	80	4e-12
375	dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete ge...	80	4e-12
376	emb|X01387.1|BSRRNA23 Bacillus stearothermophilus 23S rRNA	80	4e-12
377	dbj|AB045291.1| Clostridium perfringens rrnJ operon (16S rRNA, t...	80	4e-12
378	dbj|AB045290.1| Clostridium perfringens rrnI operon (16S rRNA, t...	80	4e-12
379	dbj|AB045289.1| Clostridium perfringens rrnH operon (16S rRNA, t...	80	4e-12
380	dbj|AB045288.1| Clostridium perfringens rrnG operon (16S rRNA, 2...	80	4e-12
381	dbj|AB045287.1| Clostridium perfringens rrnF operon (16S rRNA, 2...	80	4e-12
382	dbj|AB045286.1| Clostridium perfringens rrnE operon (16S rRNA, 2...	80	4e-12
383	dbj|AB045285.1| Clostridium perfringens rrnD operon (16S rRNA, 2...	80	4e-12
384	dbj|AB045284.1| Clostridium perfringens rrnC operon (16S rRNA, 2...	80	4e-12
385	dbj|AB045283.1| Clostridium perfringens rrnB operon (16S rRNA, 2...	80	4e-12
386	dbj|AB045282.1| Clostridium perfringens rrnA operon (16S rRNA, 2...	80	4e-12
387	dbj|AP005504.3| Oryza sativa (japonica cultivar-group) genomic D...	78	2e-11
388	dbj|AP004635.3| Oryza sativa (japonica cultivar-group) genomic D...	78	2e-11
389	gb|AY033301.1| Uncultured gamma proteobacterium MB11B11 16S ribo...	76	7e-11
390	gb|S60377.1| 23S rRNA [Leuconostoc oenos, Genomic, 2838 nt]	76	7e-11
391	gb|AF245375.1|AF245375 Planctomycete str. 658 23S ribosomal RNA ...	76	7e-11
392	gb|M94178.1|CLORDGA Clostridium botulinum type b 23S ribosomal RNA	76	7e-11
393	gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome	74	3e-10
394	gb|AY584511.1| Tolypothrix sp. PCC 7601 23S ribosomal RNA gene, ...	74	3e-10
395	emb|AL162758.2|NMA7Z2491 Neisseria meningitidis serogroup A stra...	74	3e-10
396	emb|AL162757.2|NMA6Z2491 Neisseria meningitidis serogroup A stra...	74	3e-10
397	emb|AL162753.2|NMA2Z2491 Neisseria meningitidis serogroup A stra...	74	3e-10
398	emb|AL162752.2|NMA1Z2491 Neisseria meningitidis serogroup A stra...	74	3e-10
399	gb|AY957978.1| Candidatus Accumulibacter phosphatis RC87 23S rib...	74	3e-10
400	gb|AF263560.1| Secondary endosymbiont of Calophya schini 16S rib...	74	3e-10
401	gb|AE002098.2| Neisseria meningitidis MC58, complete genome	74	3e-10
402	emb|X67300.1|NM23SRRNA N.meningitidis gene for 23S rRNA	74	3e-10
403	gb|AE004969.1| Neisseria gonorrhoeae FA 1090, complete genome	74	3e-10
404	gb|M94261.1|CLORDGC Clostridium botulinum type e 23S ribosomal RNA	74	3e-10
405	gb|M94259.1|CLORDGB Clostridium botulinum type b 23S ribosomal RNA	74	3e-10
406	gb|AY458647.1| Uncultured bacterium 580 clone EBAC000-36A07 geno...	72	1e-09
407	gb|AF548142.1| Primary endosymbiont of Sitophilus zeamais 16S-23...	72	1e-09
408	gb|AF548136.1| Sodalis glossinidius 16S-23S ribosomal RNA (rrnB)...	72	1e-09
409	gb|AF548135.1| Sodalis glossinidius 16S-23S ribosomal RNA (rrnA)...	72	1e-09
410	emb|CR555306.1| Azoarcus sp. EbN1 complete genome	72	1e-09
411	gb|AY957979.1| Rhodocyclus purpureus DSM 168 16S-23S ribosomal R...	72	1e-09
412	gb|AY957968.1| Uncultured beta proteobacterium RC97 23S ribosoma...	72	1e-09
413	gb|AY957957.1| Candidatus Accumulibacter phosphatis RC50 16S rib...	72	1e-09
414	dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, compl...	72	1e-09
415	dbj|BA000004.3| Bacillus halodurans C-125 DNA, complete genome	72	1e-09
416	gb|AF129499.1|AF129499 Buchnera aphidicola natural-host Schlecht...	72	1e-09
417	dbj|AB031215.1| Bacillus halodurans ygaG, orf, ygxA, rrnH-16S, r...	72	1e-09
418	dbj|AB031214.1| Bacillus halodurans yvgQ, rrnG-16S, trn-lle, trn...	72	1e-09
419	dbj|AB031213.1| Bacillus halodurans ydcI, ydcK, trn-Asn, trn-Ser...	72	1e-09
420	dbj|AB031212.1| Bacillus halodurans orf1, orf2, kbaA, ybaN, rrnE...	72	1e-09
421	dbj|AB031211.1| Bacillus halodurans lysS, rrnC-16S, trn-Ile, trn...	72	1e-09
422	dbj|AB031210.1| Bacillus halodurans dnaX, yaaK, recR, yaaL, bofA...	72	1e-09
423	dbj|AB031209.1| Bacillus halodurans orf1, orf2, rrnA-16S, rrnA-2...	72	1e-09
424	dbj|BA000021.3| Wigglesworthia glossinidia endosymbiont of Gloss...	72	1e-09
425	gb|L08062.1|CLORGADG Clostridium tyrobutyricum 5S, 16S and 23S r...	72	1e-09
426	dbj|D11459.1|BAC23SRR B. alcalophilus gene for 23S ribosomal RNA...	72	1e-09
427	dbj|AB019250.1| Erysipelothrix rhusiopathiae genes for 16S rRNA,...	72	1e-09
428	dbj|AB019249.1| Erysipelothrix rhusiopathiae genes for 16S rRNA,...	72	1e-09
429	dbj|AB019248.1| Erysipelothrix tonsillarum genes for 16S rRNA, 2...	72	1e-09
430	dbj|AB019247.1| Erysipelothrix rhusiopathiae genes for 16S rRNA,...	72	1e-09
431	dbj|AB013373.1| Bacillus halodurans C-125 23S, 5S and 16S rRNA g...	72	1e-09
432	gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome	70	4e-09
433	gb|AY584518.1| Oscillatoria sp. strain PCC 6506 23S ribosomal RN...	70	4e-09
434	gb|AF548141.1| Primary endosymbiont of Sitophilus zeamais 16S-23...	70	4e-09
435	gb|AF548139.1| Primary endosymbiont of Sitophilus oryzae 16S-23S...	70	4e-09
436	gb|AF548138.1| Primary endosymbiont of Sitophilus oryzae 16S-23S...	70	4e-09
437	gb|AF548137.1| Primary endosymbiont of Sitophilus oryzae 16S-23S...	70	4e-09
438	gb|AE014075.1| Escherichia coli CFT073, complete genome	70	4e-09
439	gb|CP000243.1| Escherichia coli UTI89, complete genome	70	4e-09
440	gb|U00096.2| Escherichia coli K-12 MG1655, complete genome	70	4e-09
441	gb|U00006.1|ECOUW89 E. coli chromosomal region from 89.2 to 92.8...	70	4e-09
442	gb|L19201.1|ECOUW87 E. coli chromosomal region from 87.2 to 89.2...	70	4e-09
443	gb|AF476102.1| Secondary endosymbiont of Cyphonococcus alpinus 1...	70	4e-09
444	dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome	70	4e-09
445	emb|AJ549515.2|ECL549515 Enterobacter cloacae partial 23S rRNA g...	70	4e-09
446	emb|AJ549514.1|PAG549514 Pantoea agglomerans partial 23S rRNA ge...	70	4e-09
447	emb|AJ549513.1|KOX549513 Klebsiella oxytoca partial 23S rRNA gen...	70	4e-09
448	emb|AJ549512.1|KPN549512 Klebsiella pneumoniae subsp. pneumoniae...	70	4e-09
449	emb|AJ549510.1|CFR549510 Citrobacter freundii partial 23S rRNA g...	70	4e-09
450	emb|AJ549508.1|ECO549508 Escherichia coli partial 23S rRNA gene,...	70	4e-09
451	gb|AF263556.1| Secondary endosymbiont of Aphalaroida inermis 16S...	70	4e-09
452	gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome	70	4e-09
453	emb|AJ278710.1|ECO278710 Escherichia coli 23S rRNA gene, strain ...	70	4e-09
454	emb|V00348.1|ECRRNBZ E. coli ribosomal operon rrnB encoding the ...	70	4e-09
455	emb|V00331.1|ECRNA3 E. coli gene rrnB (codes for 23S ribosomal RNA)	70	4e-09
456	gb|AF053968.1|AF053968 Escherichia coli strain A 8190 rrlC opero...	70	4e-09
457	gb|AF053967.1|AF053967 Escherichia coli strain ECOR 24 rrlB oper...	70	4e-09
458	gb|AF053966.1|AF053966 Escherichia coli rrlD operon, complete se...	70	4e-09
459	gb|AF053965.1|AF053965 Escherichia coli strain ECOR 40 rrlB oper...	70	4e-09
460	gb|AF053964.1|AF053964 Escherichia coli strain ECOR 52 rrlD oper...	70	4e-09
461	gb|AF053963.1|AF053963 Escherichia coli strain ECOR 35 rrlC oper...	70	4e-09
462	gb|U18997.1|ECOUW67 Escherichia coli K-12 chromosomal region fro...	70	4e-09
463	gb|U77928.1|CFU77928 Citrobacter freundii 23S ribosomal RNA (rrl...	70	4e-09
464	gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome	70	4e-09
465	gb|J01695.1|ECORGNB E.coli rRNA operon (rrnB) coding for Glu-tRN...	70	4e-09
466	pdb|2AWB|B Chain B, Crystal Structure Of The Bacterial Ribosome ...	70	4e-09
467	pdb|2AW4|B Chain B, Crystal Structure Of The Bacterial Ribosome ...	70	4e-09
468	gb|U72488.1|CVU72488 Cloning vector pRNA8, complete sequence	70	4e-09
469	dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome	70	4e-09
470	gb|U70214.1|ECU70214 Escherichia coli chromosome minutes 4-6	70	4e-09
471	gb|CP000034.1| Shigella dysenteriae Sd197, complete genome	70	4e-09
472	emb|X87284.1|KP23S1388 K.pneumoniae 23S rRNA gene, ATCC 13883 T	70	4e-09
473	pdb|1P86|0 Chain 0, Real Space Refined Coordinates Of The 50s Su...	70	4e-09
474	pdb|1P85|0 Chain 0, Real Space Refined Coordinates Of The 50s Su...	70	4e-09
475	gb|L10328.1|ECOUW82 E. coli; the region from 81.5 to 84.5 minutes	70	4e-09
476	pdb|1C2W|B Chain B, 23s Rrna Structure Fitted To A Cryo-Electron...	70	4e-09
477	gb|CP000036.1| Shigella boydii Sb227, complete genome	70	4e-09
478	gb|CP000038.1| Shigella sonnei Ss046, complete genome	70	4e-09
479	dbj|D12649.1|ECORRNH E.coli rrnH gene for rRNAs and tRNAs	70	4e-09
480	dbj|AB035926.1| Escherichia coli O157:H7 yaeD, rrsH, ileV, alaV,...	70	4e-09
481	dbj|AB035925.1| Escherichia coli O157:H7 clpB, rrsG, gltW, rrlG,...	70	4e-09
482	dbj|AB035924.1| Escherichia coli O157:H7 purH, rrsE, gltV, rrlE,...	70	4e-09
483	dbj|AB035923.1| Escherichia coli O157:H7 yrdA, rrsD, ileU, alaU,...	70	4e-09
484	dbj|AB035922.1| Escherichia coli O157:H7 yieP, rrsC, gltU, rrlC,...	70	4e-09
485	dbj|AB035921.1| Escherichia coli O157:H7 murI, rrsB, gltT, rrlB,...	70	4e-09
486	dbj|AB035920.1| Escherichia coli O157:H7 hemG, rrsA, ileT, alaT,...	70	4e-09
487	gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome	68	2e-08
488	gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome	68	2e-08
489	gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-...	68	2e-08
490	gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete...	68	2e-08
491	gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome	68	2e-08
492	gb|AY224388.1| Bacillus cereus strain BGSC 6A5 rrnM operon, comp...	68	2e-08
493	gb|AY224387.1| Bacillus cereus strain BGSC 6A5 rrnL operon, comp...	68	2e-08
494	gb|AY224386.1| Bacillus cereus strain BGSC 6A5 rrnK operon, comp...	68	2e-08
495	gb|AY224385.1| Bacillus cereus strain BGSC 6A5 rrnI and rrnJ ope...	68	2e-08
496	gb|AY224384.1| Bacillus cereus strain BGSC 6A5 rrnG and rrnH ope...	68	2e-08
497	gb|AY224383.1| Bacillus cereus strain BGSC 6A5 rrnF operon, comp...	68	2e-08
498	gb|AY224382.1| Bacillus cereus strain BGSC 6A5 rrnE operon, comp...	68	2e-08
499	gb|AY224381.1| Bacillus cereus strain BGSC 6A5 rrnC and rrnD ope...	68	2e-08
500	gb|AY224380.1| Bacillus cereus strain BGSC 6A5 rrnB operon, comp...	68	2e-08

---

>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast,
              complete genome
          Length = 134551

 Score =  569 bits (287), Expect = e-159
 Identities = 287/287 (100%)
 Strand = Plus / Minus

                                                                          
Query: 1      tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118775 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 118716

                                                                          
Query: 61     gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118715 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 118656

                                                                          
Query: 121    agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118655 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 118596

                                                                          
Query: 181    tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 240
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118595 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 118536

                                                             
Query: 241    gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118535 gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 118489



 Score =  569 bits (287), Expect = e-159
 Identities = 287/287 (100%)
 Strand = Plus / Plus

                                                                         
Query: 1     tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96381 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 96440

                                                                         
Query: 61    gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96441 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 96500

                                                                         
Query: 121   agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96501 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 96560

                                                                         
Query: 181   tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 240
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96561 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 96620

                                                            
Query: 241   gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
             |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96621 gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 96667

---

>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast,
              complete genome
          Length = 134551

 Score =  569 bits (287), Expect = e-159
 Identities = 287/287 (100%)
 Strand = Plus / Minus

                                                                          
Query: 1      tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118775 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 118716

                                                                          
Query: 61     gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118715 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 118656

                                                                          
Query: 121    agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118655 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 118596

                                                                          
Query: 181    tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 240
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118595 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 118536

                                                             
Query: 241    gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118535 gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 118489



 Score =  569 bits (287), Expect = e-159
 Identities = 287/287 (100%)
 Strand = Plus / Plus

                                                                         
Query: 1     tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96381 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 96440

                                                                         
Query: 61    gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96441 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 96500

                                                                         
Query: 121   agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96501 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 96560

                                                                         
Query: 181   tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 240
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96561 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 96620

                                                            
Query: 241   gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
             |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96621 gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 96667

---

>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete
              genome
          Length = 134496

 Score =  569 bits (287), Expect = e-159
 Identities = 287/287 (100%)
 Strand = Plus / Minus

                                                                          
Query: 1      tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118724 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 118665

                                                                          
Query: 61     gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118664 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 118605

                                                                          
Query: 121    agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118604 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 118545

                                                                          
Query: 181    tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 240
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118544 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 118485

                                                             
Query: 241    gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118484 gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 118438



 Score =  569 bits (287), Expect = e-159
 Identities = 287/287 (100%)
 Strand = Plus / Plus

                                                                         
Query: 1     tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96326 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 96385

                                                                         
Query: 61    gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96386 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 96445

                                                                         
Query: 121   agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96446 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 96505

                                                                         
Query: 181   tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 240
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96506 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 96565

                                                            
Query: 241   gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
             |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96566 gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 96612

---

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  569 bits (287), Expect = e-159
 Identities = 287/287 (100%)
 Strand = Plus / Plus

                                                                            
Query: 1        tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31508959 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 31509018

                                                                            
Query: 61       gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31509019 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 31509078

                                                                            
Query: 121      agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31509079 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 31509138

                                                                            
Query: 181      tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 240
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31509139 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 31509198

                                                               
Query: 241      gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
                |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31509199 gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 31509245



 Score =  553 bits (279), Expect = e-154
 Identities = 285/287 (99%)
 Strand = Plus / Minus

                                                                            
Query: 1        tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27320591 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 27320532

                                                                            
Query: 61       gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27320531 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 27320472

                                                                            
Query: 121      agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
                ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 27320471 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccctgaaaacccaagg 27320412

                                                                            
Query: 181      tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 240
                |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27320411 tttcctccacaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 27320352

                                                               
Query: 241      gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
                |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27320351 gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 27320305



 Score =  448 bits (226), Expect = e-123
 Identities = 226/226 (100%)
 Strand = Plus / Minus

                                                                            
Query: 1        tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11513143 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 11513084

                                                                            
Query: 61       gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11513083 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 11513024

                                                                            
Query: 121      agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11513023 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 11512964

                                                              
Query: 181      tttcctccgcaaggttcgtccacggagggtgagtcagggcctaaga 226
                ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11512963 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaaga 11512918

---

>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete
             sequence
          Length = 133449

 Score =  569 bits (287), Expect = e-159
 Identities = 287/287 (100%)
 Strand = Plus / Minus

                                                                         
Query: 1     tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83637 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 83578

                                                                         
Query: 61    gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83577 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 83518

                                                                         
Query: 121   agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83517 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 83458

                                                                         
Query: 181   tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 240
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83457 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 83398

                                                            
Query: 241   gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
             |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83397 gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 83351

---

>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome
          Length = 134525

 Score =  569 bits (287), Expect = e-159
 Identities = 287/287 (100%)
 Strand = Plus / Minus

                                                                          
Query: 1      tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118744 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 118685

                                                                          
Query: 61     gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118684 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 118625

                                                                          
Query: 121    agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118624 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 118565

                                                                          
Query: 181    tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 240
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118564 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 118505

                                                             
Query: 241    gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118504 gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 118458



 Score =  569 bits (287), Expect = e-159
 Identities = 287/287 (100%)
 Strand = Plus / Plus

                                                                         
Query: 1     tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96374 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 96433

                                                                         
Query: 61    gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96434 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 96493

                                                                         
Query: 121   agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96494 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 96553

                                                                         
Query: 181   tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 240
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96554 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 96613

                                                            
Query: 241   gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
             |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96614 gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 96660

---

>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08,
              complete sequence
          Length = 145980

 Score =  569 bits (287), Expect = e-159
 Identities = 287/287 (100%)
 Strand = Plus / Plus

                                                                          
Query: 1      tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123422 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 123481

                                                                          
Query: 61     gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123482 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 123541

                                                                          
Query: 121    agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123542 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 123601

                                                                          
Query: 181    tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 240
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123602 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 123661

                                                             
Query: 241    gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123662 gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 123708



 Score =  569 bits (287), Expect = e-159
 Identities = 287/287 (100%)
 Strand = Plus / Plus

                                                                         
Query: 1     tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15148 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 15207

                                                                         
Query: 61    gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15208 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 15267

                                                                         
Query: 121   agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15268 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 15327

                                                                         
Query: 181   tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 240
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15328 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 15387

                                                            
Query: 241   gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
             |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15388 gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 15434

---

>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21,
              complete sequence
          Length = 167113

 Score =  569 bits (287), Expect = e-159
 Identities = 287/287 (100%)
 Strand = Plus / Plus

                                                                          
Query: 1      tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141956 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 142015

                                                                          
Query: 61     gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142016 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 142075

                                                                          
Query: 121    agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142076 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 142135

                                                                          
Query: 181    tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 240
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142136 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 142195

                                                             
Query: 241    gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142196 gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 142242

---

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score =  569 bits (287), Expect = e-159
 Identities = 287/287 (100%)
 Strand = Plus / Plus

                                                                           
Query: 1       tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9269308 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 9269367

                                                                           
Query: 61      gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9269368 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 9269427

                                                                           
Query: 121     agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9269428 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 9269487

                                                                           
Query: 181     tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 240
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9269488 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 9269547

                                                              
Query: 241     gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
               |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9269548 gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 9269594



 Score =  569 bits (287), Expect = e-159
 Identities = 287/287 (100%)
 Strand = Plus / Plus

                                                                           
Query: 1       tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9228808 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 9228867

                                                                           
Query: 61      gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9228868 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 9228927

                                                                           
Query: 121     agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9228928 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 9228987

                                                                           
Query: 181     tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 240
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9228988 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 9229047

                                                              
Query: 241     gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
               |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9229048 gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 9229094



 Score =  569 bits (287), Expect = e-159
 Identities = 287/287 (100%)
 Strand = Plus / Plus

                                                                           
Query: 1       tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9165396 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 9165455

                                                                           
Query: 61      gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9165456 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 9165515

                                                                           
Query: 121     agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9165516 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 9165575

                                                                           
Query: 181     tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 240
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9165576 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 9165635

                                                              
Query: 241     gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
               |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9165636 gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 9165682



 Score =  569 bits (287), Expect = e-159
 Identities = 287/287 (100%)
 Strand = Plus / Plus

                                                                           
Query: 1       tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9057222 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 9057281

                                                                           
Query: 61      gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9057282 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 9057341

                                                                           
Query: 121     agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9057342 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 9057401

                                                                           
Query: 181     tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 240
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9057402 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 9057461

                                                              
Query: 241     gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
               |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9057462 gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 9057508

---

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  569 bits (287), Expect = e-159
 Identities = 287/287 (100%)
 Strand = Plus / Plus

                                                                            
Query: 1        tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19939293 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 19939352

                                                                            
Query: 61       gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19939353 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 19939412

                                                                            
Query: 121      agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19939413 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 19939472

                                                                            
Query: 181      tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 240
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19939473 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 19939532

                                                               
Query: 241      gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
                |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19939533 gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 19939579



 Score =  561 bits (283), Expect = e-157
 Identities = 286/287 (99%)
 Strand = Plus / Minus

                                                                            
Query: 1        tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
                ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 10276138 tgaagatgaacggggctaagcaatctgccgaagctgtgggatgtcaaaatgcatcggtag 10276079

                                                                            
Query: 61       gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10276078 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 10276019

                                                                            
Query: 121      agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10276018 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 10275959

                                                                            
Query: 181      tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 240
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10275958 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 10275899

                                                               
Query: 241      gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
                |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10275898 gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 10275852



 Score =  553 bits (279), Expect = e-154
 Identities = 285/287 (99%)
 Strand = Plus / Plus

                                                                            
Query: 1        tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10388160 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 10388219

                                                                            
Query: 61       gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
                | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10388220 gagagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 10388279

                                                                            
Query: 121      agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10388280 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 10388339

                                                                            
Query: 181      tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 240
                ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 10388340 tttcctccgcaaggttcgtccacagagggtgagtcagggcctaagatcaggccgaaaggc 10388399

                                                               
Query: 241      gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
                |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10388400 gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 10388446



 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 1        tgaagatgaacggggctaagc 21
                |||||||||||||||||||||
Sbjct: 15833493 tgaagatgaacggggctaagc 15833473

---

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score =  569 bits (287), Expect = e-159
 Identities = 287/287 (100%)
 Strand = Plus / Minus

                                                                           
Query: 1       tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9240973 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 9240914

                                                                           
Query: 61      gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9240913 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 9240854

                                                                           
Query: 121     agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9240853 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 9240794

                                                                           
Query: 181     tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 240
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9240793 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 9240734

                                                              
Query: 241     gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
               |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9240733 gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 9240687



 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 45/47 (95%)
 Strand = Plus / Minus

                                                              
Query: 32      agctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttag 78
               |||| |||||| |||||||||||||||||||||||||||||||||||
Sbjct: 3580285 agctatgggatatcaaaatgcatcggtaggggagcgttccgccttag 3580239



 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                                    
Query: 181      tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 232
                |||||||| |||| |||||||| |||| |||| | |||||||||||||||||
Sbjct: 22199029 tttcctccacaagattcgtccatggagagtgaattagggcctaagatcaggc 22198978



 Score = 46.1 bits (23), Expect = 0.061
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                   
Query: 1        tgaagatgaacggggctaagcgatctgccgaagct 35
                |||| ||||| |||||||||||||||||| |||||
Sbjct: 22199127 tgaaaatgaatggggctaagcgatctgccaaagct 22199093

---

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  569 bits (287), Expect = e-159
 Identities = 287/287 (100%)
 Strand = Plus / Plus

                                                                            
Query: 1        tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31599475 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 31599534

                                                                            
Query: 61       gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31599535 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 31599594

                                                                            
Query: 121      agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31599595 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 31599654

                                                                            
Query: 181      tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 240
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31599655 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 31599714

                                                               
Query: 241      gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
                |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 31599715 gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 31599761



 Score =  553 bits (279), Expect = e-154
 Identities = 285/287 (99%)
 Strand = Plus / Minus

                                                                            
Query: 1        tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27411914 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 27411855

                                                                            
Query: 61       gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27411854 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 27411795

                                                                            
Query: 121      agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
                ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 27411794 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccctgaaaacccaagg 27411735

                                                                            
Query: 181      tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 240
                |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27411734 tttcctccacaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 27411675

                                                               
Query: 241      gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
                |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 27411674 gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 27411628



 Score =  448 bits (226), Expect = e-123
 Identities = 226/226 (100%)
 Strand = Plus / Minus

                                                                            
Query: 1        tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11509906 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 11509847

                                                                            
Query: 61       gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11509846 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 11509787

                                                                            
Query: 121      agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11509786 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 11509727

                                                              
Query: 181      tttcctccgcaaggttcgtccacggagggtgagtcagggcctaaga 226
                ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11509726 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaaga 11509681

---

>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete
             sequence
          Length = 116932

 Score =  569 bits (287), Expect = e-159
 Identities = 287/287 (100%)
 Strand = Plus / Minus

                                                                         
Query: 1     tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46750 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 46691

                                                                         
Query: 61    gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46690 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 46631

                                                                         
Query: 121   agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46630 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 46571

                                                                         
Query: 181   tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 240
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46570 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 46511

                                                            
Query: 241   gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
             |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46510 gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 46464

---

>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0036E18
          Length = 141148

 Score =  569 bits (287), Expect = e-159
 Identities = 287/287 (100%)
 Strand = Plus / Minus

                                                                         
Query: 1     tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52186 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 52127

                                                                         
Query: 61    gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52126 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 52067

                                                                         
Query: 121   agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52066 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 52007

                                                                         
Query: 181   tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 240
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52006 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 51947

                                                            
Query: 241   gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
             |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51946 gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 51900

---

>dbj|AK107087.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-G07, full
            insert sequence
          Length = 1935

 Score =  569 bits (287), Expect = e-159
 Identities = 287/287 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1    tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760  tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 819

                                                                        
Query: 61   gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 820  gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 879

                                                                        
Query: 121  agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 880  agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 939

                                                                        
Query: 181  tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 940  tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 999

                                                           
Query: 241  gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
            |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1000 gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 1046

---

>dbj|AK105766.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E02, full
           insert sequence
          Length = 2146

 Score =  569 bits (287), Expect = e-159
 Identities = 287/287 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 289

                                                                       
Query: 61  gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 349

                                                                       
Query: 121 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 409

                                                                       
Query: 181 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 469

                                                          
Query: 241 gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 516

---

>dbj|AK105744.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B04, full
            insert sequence
          Length = 2390

 Score =  569 bits (287), Expect = e-159
 Identities = 287/287 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1    tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 955  tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 1014

                                                                        
Query: 61   gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1015 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 1074

                                                                        
Query: 121  agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1075 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 1134

                                                                        
Query: 181  tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1135 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 1194

                                                           
Query: 241  gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
            |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1195 gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 1241

---

>dbj|AK063769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B10, full
            insert sequence
          Length = 2589

 Score =  569 bits (287), Expect = e-159
 Identities = 287/287 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1    tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 826  tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 885

                                                                        
Query: 61   gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 886  gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 945

                                                                        
Query: 121  agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 946  agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 1005

                                                                        
Query: 181  tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1006 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 1065

                                                           
Query: 241  gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
            |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1066 gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 1112

---

>dbj|AK059208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B06, full
            insert sequence
          Length = 1896

 Score =  569 bits (287), Expect = e-159
 Identities = 287/287 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1    tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 955  tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 1014

                                                                        
Query: 61   gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1015 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 1074

                                                                        
Query: 121  agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1075 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 1134

                                                                        
Query: 181  tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1135 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 1194

                                                           
Query: 241  gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
            |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1195 gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 1241

---

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  569 bits (287), Expect = e-159
 Identities = 287/287 (100%)
 Strand = Plus / Plus

                                                                            
Query: 1        tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19950569 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 19950628

                                                                            
Query: 61       gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19950629 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 19950688

                                                                            
Query: 121      agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19950689 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 19950748

                                                                            
Query: 181      tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 240
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19950749 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 19950808

                                                               
Query: 241      gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
                |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19950809 gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 19950855



 Score =  561 bits (283), Expect = e-157
 Identities = 286/287 (99%)
 Strand = Plus / Minus

                                                                            
Query: 1        tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
                ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 10282177 tgaagatgaacggggctaagcaatctgccgaagctgtgggatgtcaaaatgcatcggtag 10282118

                                                                            
Query: 61       gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10282117 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 10282058

                                                                            
Query: 121      agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10282057 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 10281998

                                                                            
Query: 181      tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 240
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10281997 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 10281938

                                                               
Query: 241      gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
                |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10281937 gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 10281891



 Score =  553 bits (279), Expect = e-154
 Identities = 285/287 (99%)
 Strand = Plus / Plus

                                                                            
Query: 1        tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10394199 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 10394258

                                                                            
Query: 61       gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
                | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10394259 gagagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 10394318

                                                                            
Query: 121      agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10394319 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 10394378

                                                                            
Query: 181      tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 240
                ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 10394379 tttcctccgcaaggttcgtccacagagggtgagtcagggcctaagatcaggccgaaaggc 10394438

                                                               
Query: 241      gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
                |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10394439 gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 10394485



 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 1        tgaagatgaacggggctaagc 21
                |||||||||||||||||||||
Sbjct: 15841734 tgaagatgaacggggctaagc 15841714

---

>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome
          Length = 134494

 Score =  569 bits (287), Expect = e-159
 Identities = 287/287 (100%)
 Strand = Plus / Minus

                                                                          
Query: 1      tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118718 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 118659

                                                                          
Query: 61     gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118658 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 118599

                                                                          
Query: 121    agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118598 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 118539

                                                                          
Query: 181    tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 240
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118538 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 118479

                                                             
Query: 241    gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118478 gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 118432



 Score =  569 bits (287), Expect = e-159
 Identities = 287/287 (100%)
 Strand = Plus / Plus

                                                                         
Query: 1     tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96321 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 96380

                                                                         
Query: 61    gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96381 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 96440

                                                                         
Query: 121   agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96441 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 96500

                                                                         
Query: 181   tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 240
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96501 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 96560

                                                            
Query: 241   gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
             |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96561 gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 96607

---

>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome
          Length = 134545

 Score =  569 bits (287), Expect = e-159
 Identities = 287/287 (100%)
 Strand = Plus / Minus

                                                                          
Query: 1      tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118910 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 118851

                                                                          
Query: 61     gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118850 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 118791

                                                                          
Query: 121    agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118790 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 118731

                                                                          
Query: 181    tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 240
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118730 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 118671

                                                             
Query: 241    gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118670 gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 118624



 Score =  569 bits (287), Expect = e-159
 Identities = 287/287 (100%)
 Strand = Plus / Plus

                                                                         
Query: 1     tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95984 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 96043

                                                                         
Query: 61    gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96044 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 96103

                                                                         
Query: 121   agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96104 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 96163

                                                                         
Query: 181   tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 240
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96164 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 96223

                                                            
Query: 241   gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
             |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96224 gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 96270

---

>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0023M11,
              complete sequence
          Length = 120228

 Score =  561 bits (283), Expect = e-157
 Identities = 286/287 (99%)
 Strand = Plus / Minus

                                                                          
Query: 1      tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
              ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 117691 tgaagatgaacggggctaagcaatctgccgaagctgtgggatgtcaaaatgcatcggtag 117632

                                                                          
Query: 61     gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117631 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 117572

                                                                          
Query: 121    agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117571 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 117512

                                                                          
Query: 181    tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 240
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117511 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 117452

                                                             
Query: 241    gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117451 gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 117405

---

>gb|AY694134.1| Pennisetum glaucum clone PGP005 23S ribosomal RNA gene, partial
           sequence; chloroplast
          Length = 654

 Score =  561 bits (283), Expect = e-157
 Identities = 286/287 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 363

                                                                       
Query: 61  gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 362 gggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagcg 303

                                                                       
Query: 121 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 243

                                                                       
Query: 181 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 183

                                                          
Query: 241 gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 136

---

>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome
          Length = 141182

 Score =  561 bits (283), Expect = e-157
 Identities = 286/287 (99%)
 Strand = Plus / Minus

                                                                         
Query: 1     tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43734 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 43675

                                                                         
Query: 61    gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
             |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 43674 gggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagcg 43615

                                                                         
Query: 121   agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43614 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 43555

                                                                         
Query: 181   tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 240
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43554 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 43495

                                                            
Query: 241   gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
             |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43494 gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 43448



 Score =  561 bits (283), Expect = e-157
 Identities = 286/287 (99%)
 Strand = Plus / Plus

                                                                         
Query: 1     tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21383 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 21442

                                                                         
Query: 61    gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
             |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 21443 gggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagcg 21502

                                                                         
Query: 121   agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21503 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 21562

                                                                         
Query: 181   tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 240
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21563 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 21622

                                                            
Query: 241   gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
             |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21623 gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 21669

---

>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from
             chromosome 10, complete sequence
          Length = 134933

 Score =  561 bits (283), Expect = e-157
 Identities = 286/287 (99%)
 Strand = Plus / Minus

                                                                         
Query: 1     tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
             ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 57463 tgaagatgaacggggctaagcaatctgccgaagctgtgggatgtcaaaatgcatcggtag 57404

                                                                         
Query: 61    gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57403 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 57344

                                                                         
Query: 121   agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57343 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 57284

                                                                         
Query: 181   tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 240
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57283 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 57224

                                                            
Query: 241   gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
             |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 57223 gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 57177

---

>gb|AY082604.1| Saccharum hybrid cultivar 23S ribosomal RNA gene, partial sequence;
           tRNA-Ala (trnA) gene, complete sequence; hypothetical
           protein gene, complete cds; ACR pseudogene, complete
           sequence; tRNA-Ile (trnI) gene, partial sequence; and
           ORF72 pseudogene, partial sequence; chloroplast genes
           for chloroplast products
          Length = 3026

 Score =  561 bits (283), Expect = e-157
 Identities = 286/287 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 305

                                                                       
Query: 61  gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 304 gggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagcg 245

                                                                       
Query: 121 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 185

                                                                       
Query: 181 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 125

                                                          
Query: 241 gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 78

---

>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome
          Length = 140454

 Score =  561 bits (283), Expect = e-157
 Identities = 286/287 (99%)
 Strand = Plus / Minus

                                                                          
Query: 1      tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122574 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 122515

                                                                          
Query: 61     gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
              |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 122514 gggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagcg 122455

                                                                          
Query: 121    agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122454 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 122395

                                                                          
Query: 181    tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 240
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122394 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 122335

                                                             
Query: 241    gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122334 gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 122288



 Score =  561 bits (283), Expect = e-157
 Identities = 286/287 (99%)
 Strand = Plus / Plus

                                                                          
Query: 1      tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100263 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 100322

                                                                          
Query: 61     gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
              |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 100323 gggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagcg 100382

                                                                          
Query: 121    agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100383 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 100442

                                                                          
Query: 181    tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 240
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100443 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 100502

                                                             
Query: 241    gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100503 gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 100549

---

>dbj|AK105825.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-E01, full
           insert sequence
          Length = 1345

 Score =  561 bits (283), Expect = e-157
 Identities = 286/287 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34  tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 93

                                                                       
Query: 61  gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94  gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 153

                                                                       
Query: 121 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 213

                                                                       
Query: 181 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 240
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 214 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaggatcaggccgaaaggc 273

                                                          
Query: 241 gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 320

---

>dbj|AK105692.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-C06, full
           insert sequence
          Length = 2509

 Score =  561 bits (283), Expect = e-157
 Identities = 286/287 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99  tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 158

                                                                       
Query: 61  gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 218

                                                                       
Query: 121 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 278

                                                                       
Query: 181 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 338

                                                          
Query: 241 gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
           |||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 339 gtagtcgatggacaacgggtcaatattcctgtactaccccttgttgg 385

---

>dbj|AK058658.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-F10, full
           insert sequence
          Length = 1383

 Score =  561 bits (283), Expect = e-157
 Identities = 286/287 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43  tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 102

                                                                       
Query: 61  gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 162

                                                                       
Query: 121 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 222

                                                                       
Query: 181 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 282

                                                          
Query: 241 gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
           |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 283 gtagtcgacggacaacaggtcaatattcctgtactaccccttgttgg 329

---

>dbj|AK058324.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B08, full
           insert sequence
          Length = 1310

 Score =  561 bits (283), Expect = e-157
 Identities = 286/287 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 637

                                                                       
Query: 61  gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 638 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggttgacgaagcggaagcg 697

                                                                       
Query: 121 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 757

                                                                       
Query: 181 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 817

                                                          
Query: 241 gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 818 gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 864

---

>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome
          Length = 141182

 Score =  561 bits (283), Expect = e-157
 Identities = 286/287 (99%)
 Strand = Plus / Minus

                                                                          
Query: 1      tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123291 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 123232

                                                                          
Query: 61     gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
              |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 123231 gggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagcg 123172

                                                                          
Query: 121    agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123171 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 123112

                                                                          
Query: 181    tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 240
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123111 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 123052

                                                             
Query: 241    gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123051 gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 123005



 Score =  561 bits (283), Expect = e-157
 Identities = 286/287 (99%)
 Strand = Plus / Plus

                                                                          
Query: 1      tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100940 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 100999

                                                                          
Query: 61     gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
              |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 101000 gggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagcg 101059

                                                                          
Query: 121    agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101060 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 101119

                                                                          
Query: 181    tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 240
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101120 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 101179

                                                             
Query: 241    gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101180 gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 101226

---

>gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genomic sequence, complete
             sequence
          Length = 138345

 Score =  553 bits (279), Expect = e-154
 Identities = 285/287 (99%)
 Strand = Plus / Minus

                                                                         
Query: 1     tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20798 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 20739

                                                                         
Query: 61    gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20738 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 20679

                                                                         
Query: 121   agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
             ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 20678 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccctgaaaacccaagg 20619

                                                                         
Query: 181   tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 240
             |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20618 tttcctccacaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 20559

                                                            
Query: 241   gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
             |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20558 gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 20512

---

>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNAb0075K12, complete sequence
          Length = 125936

 Score =  553 bits (279), Expect = e-154
 Identities = 285/287 (99%)
 Strand = Plus / Plus

                                                                         
Query: 1     tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94552 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 94611

                                                                         
Query: 61    gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
             | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94612 gagagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 94671

                                                                         
Query: 121   agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94672 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 94731

                                                                         
Query: 181   tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 240
             ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 94732 tttcctccgcaaggttcgtccacagagggtgagtcagggcctaagatcaggccgaaaggc 94791

                                                            
Query: 241   gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
             |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94792 gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 94838

---

>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence
          Length = 144459

 Score =  553 bits (279), Expect = e-154
 Identities = 285/287 (99%)
 Strand = Plus / Plus

                                                                         
Query: 1     tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28616 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 28675

                                                                         
Query: 61    gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
             | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28676 gagagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 28735

                                                                         
Query: 121   agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28736 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 28795

                                                                         
Query: 181   tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 240
             ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 28796 tttcctccgcaaggttcgtccacagagggtgagtcagggcctaagatcaggccgaaaggc 28855

                                                            
Query: 241   gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
             |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 28856 gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 28902

---

>dbj|AK071923.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072N03, full
           insert sequence
          Length = 1663

 Score =  551 bits (278), Expect = e-154
 Identities = 278/278 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 229

                                                                       
Query: 61  gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 289

                                                                       
Query: 121 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 349

                                                                       
Query: 181 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 409

                                                 
Query: 241 gtagtcgatggacaacaggtcaatattcctgtactacc 278
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 410 gtagtcgatggacaacaggtcaatattcctgtactacc 447

---

>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome
          Length = 140384

 Score =  545 bits (275), Expect = e-152
 Identities = 284/287 (98%)
 Strand = Plus / Minus

                                                                          
Query: 1      tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122516 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 122457

                                                                          
Query: 61     gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
              |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 122456 gggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagcg 122397

                                                                          
Query: 121    agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122396 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 122337

                                                                          
Query: 181    tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 240
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122336 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 122277

                                                             
Query: 241    gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
                |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122276 taagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 122230



 Score =  545 bits (275), Expect = e-152
 Identities = 284/287 (98%)
 Strand = Plus / Plus

                                                                          
Query: 1      tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100221 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 100280

                                                                          
Query: 61     gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
              |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 100281 gggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagcg 100340

                                                                          
Query: 121    agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100341 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 100400

                                                                          
Query: 181    tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 240
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100401 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 100460

                                                             
Query: 241    gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
                |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100461 taagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 100507

---

>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon
          Length = 8862

 Score =  545 bits (275), Expect = e-152
 Identities = 284/287 (98%)
 Strand = Plus / Plus

                                                                        
Query: 1    tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6574 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 6633

                                                                        
Query: 61   gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
            |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 6634 gggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagcg 6693

                                                                        
Query: 121  agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6694 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 6753

                                                                        
Query: 181  tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6754 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 6813

                                                           
Query: 241  gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6814 taagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 6860

---

>emb|X01365.1|CHZM23S Maize chloroplast DNA for 4.5S and 23S ribosomal RNA
          Length = 3079

 Score =  545 bits (275), Expect = e-152
 Identities = 284/287 (98%)
 Strand = Plus / Plus

                                                                        
Query: 1    tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1162 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 1221

                                                                        
Query: 61   gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
            |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1222 gggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagcg 1281

                                                                        
Query: 121  agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1282 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 1341

                                                                        
Query: 181  tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1342 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 1401

                                                           
Query: 241  gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1402 taagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 1448

---

>gb|DQ078770.1| Zea mays clone Zmcoi6.13 cold-inducible unknown mRNA
          Length = 519

 Score =  523 bits (264), Expect = e-146
 Identities = 270/272 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 213

                                                                       
Query: 61  gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 212 gggagcgttccgccttagagggaagcaaacgcgaaagcgggggtcgacgaagcggaagcg 153

                                                                       
Query: 121 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 93

                                                                       
Query: 181 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 92  tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc 33

                                           
Query: 241 gtagtcgatggacaacaggtcaatattcctgt 272
           ||| ||||||||||||||||||||||||||||
Sbjct: 32  gtactcgatggacaacaggtcaatattcctgt 1

---

>gb|AY096798.1| Arabidopsis thaliana At2g07707 mRNA sequence
          Length = 1750

 Score =  504 bits (254), Expect = e-140
 Identities = 278/286 (97%)
 Strand = Plus / Plus

                                                                        
Query: 2    gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1152 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 1211

                                                                        
Query: 62   ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
            ||||||||||||||||| ||||||||||||||  ||||| ||| ||||||||||||||||
Sbjct: 1212 ggagcgttccgccttagggggaagcaaccgcgcgagcggcggtggacgaagcggaagcga 1271

                                                                        
Query: 122  gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
            |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| 
Sbjct: 1272 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaaggg 1331

                                                                        
Query: 182  ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1332 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 1391

                                                          
Query: 242  tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
            ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1392 tagtcgatggacaacaggtgaatattcctgtactaccccttgttgg 1437

---

>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence
          Length = 153482

 Score =  504 bits (254), Expect = e-140
 Identities = 278/286 (97%)
 Strand = Plus / Minus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131845 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 131786

                                                                          
Query: 62     ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
              ||||||||||||||||| ||||||||||||||  ||||| ||| ||||||||||||||||
Sbjct: 131785 ggagcgttccgccttagggggaagcaaccgcgcgagcggcggtggacgaagcggaagcga 131726

                                                                          
Query: 122    gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
              |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| 
Sbjct: 131725 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaaggg 131666

                                                                          
Query: 182    ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131665 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 131606

                                                            
Query: 242    tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 131605 tagtcgatggacaacaggtgaatattcctgtactaccccttgttgg 131560



 Score =  504 bits (254), Expect = e-140
 Identities = 278/286 (97%)
 Strand = Plus / Plus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104919 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 104978

                                                                          
Query: 62     ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
              ||||||||||||||||| ||||||||||||||  ||||| ||| ||||||||||||||||
Sbjct: 104979 ggagcgttccgccttagggggaagcaaccgcgcgagcggcggtggacgaagcggaagcga 105038

                                                                          
Query: 122    gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
              |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| 
Sbjct: 105039 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaaggg 105098

                                                                          
Query: 182    ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105099 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 105158

                                                            
Query: 242    tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 105159 tagtcgatggacaacaggtgaatattcctgtactaccccttgttgg 105204

---

>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence,
              strain:Columbia
          Length = 154478

 Score =  504 bits (254), Expect = e-140
 Identities = 278/286 (97%)
 Strand = Plus / Minus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132806 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 132747

                                                                          
Query: 62     ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
              ||||||||||||||||| ||||||||||||||  ||||| ||| ||||||||||||||||
Sbjct: 132746 ggagcgttccgccttagggggaagcaaccgcgcgagcggcggtggacgaagcggaagcga 132687

                                                                          
Query: 122    gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
              |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| 
Sbjct: 132686 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaaggg 132627

                                                                          
Query: 182    ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132626 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 132567

                                                            
Query: 242    tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 132566 tagtcgatggacaacaggtgaatattcctgtactaccccttgttgg 132521



 Score =  504 bits (254), Expect = e-140
 Identities = 278/286 (97%)
 Strand = Plus / Plus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105843 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 105902

                                                                          
Query: 62     ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
              ||||||||||||||||| ||||||||||||||  ||||| ||| ||||||||||||||||
Sbjct: 105903 ggagcgttccgccttagggggaagcaaccgcgcgagcggcggtggacgaagcggaagcga 105962

                                                                          
Query: 122    gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
              |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| 
Sbjct: 105963 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaaggg 106022

                                                                          
Query: 182    ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106023 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 106082

                                                            
Query: 242    tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 106083 tagtcgatggacaacaggtgaatattcctgtactaccccttgttgg 106128

---

>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome
          Length = 148964

 Score =  496 bits (250), Expect = e-137
 Identities = 277/286 (96%)
 Strand = Plus / Minus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126714 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 126655

                                                                          
Query: 62     ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
              |||||||||||||||||||||||||| ||||| |||| || || ||||||||||||||||
Sbjct: 126654 ggagcgttccgccttagagggaagcacccgcgcaagcaggtgtggacgaagcggaagcga 126595

                                                                          
Query: 122    gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
              |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 126594 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 126535

                                                                          
Query: 182    ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126534 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 126475

                                                            
Query: 242    tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 126474 tagtcgatggacaacaggtgaatattcctgtactaccccttgttgg 126429



 Score =  496 bits (250), Expect = e-137
 Identities = 277/286 (96%)
 Strand = Plus / Plus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108208 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 108267

                                                                          
Query: 62     ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
              |||||||||||||||||||||||||| ||||| |||| || || ||||||||||||||||
Sbjct: 108268 ggagcgttccgccttagagggaagcacccgcgcaagcaggtgtggacgaagcggaagcga 108327

                                                                          
Query: 122    gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
              |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 108328 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 108387

                                                                          
Query: 182    ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108388 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 108447

                                                            
Query: 242    tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 108448 tagtcgatggacaacaggtgaatattcctgtactaccccttgttgg 108493

---

>emb|X06235.1|MIOBRRNP Oenothera berteriana mitDNA with part of plastid rRNA operon
          Length = 2900

 Score =  496 bits (250), Expect = e-137
 Identities = 277/286 (96%)
 Strand = Plus / Plus

                                                                        
Query: 2    gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
            ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 788  gaagatgaacggggctaagcgatctgccgaagctgcgggatgtaaaaatgcatcggtagg 847

                                                                        
Query: 62   ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
            |||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||
Sbjct: 848  ggagcgttccgccttagagggaagcacccgcgagagcgggggtggacgaagcggaagcga 907

                                                                        
Query: 122  gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
            |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 908  gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 967

                                                                        
Query: 182  ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 968  ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 1027

                                                          
Query: 242  tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
            ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1028 tagtcgatggacaacaggtgaatattcctgtactaccccttgttgg 1073

---

>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome
          Length = 160301

 Score =  488 bits (246), Expect = e-135
 Identities = 276/286 (96%)
 Strand = Plus / Minus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
              ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 138351 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtagg 138292

                                                                          
Query: 62     ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
              ||||||||||||||||| |||||||| |||||  |||||| || ||||||||||||||||
Sbjct: 138291 ggagcgttccgccttagggggaagcacccgcgtgagcgggagtagacgaagcggaagcga 138232

                                                                          
Query: 122    gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
              |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| 
Sbjct: 138231 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaaggg 138172

                                                                          
Query: 182    ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138171 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 138112

                                                            
Query: 242    tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 138111 tagtcgatggacaacaggtgaatattcctgtactaccccttgttgg 138066



 Score =  488 bits (246), Expect = e-135
 Identities = 276/286 (96%)
 Strand = Plus / Plus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
              ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 110746 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtagg 110805

                                                                          
Query: 62     ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
              ||||||||||||||||| |||||||| |||||  |||||| || ||||||||||||||||
Sbjct: 110806 ggagcgttccgccttagggggaagcacccgcgtgagcgggagtagacgaagcggaagcga 110865

                                                                          
Query: 122    gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
              |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| 
Sbjct: 110866 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaaggg 110925

                                                                          
Query: 182    ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110926 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 110985

                                                            
Query: 242    tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 110986 tagtcgatggacaacaggtgaatattcctgtactaccccttgttgg 111031

---

>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome
          Length = 160286

 Score =  488 bits (246), Expect = e-135
 Identities = 276/286 (96%)
 Strand = Plus / Minus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
              ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 138556 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagg 138497

                                                                          
Query: 62     ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
              |||||||||||||||||||||||||| |||||| ||| ||||| ||||||||||||||||
Sbjct: 138496 ggagcgttccgccttagagggaagcacccgcgagagcaggggtggacgaagcggaagcga 138437

                                                                          
Query: 122    gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
              |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 138436 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 138377

                                                                          
Query: 182    ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138376 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 138317

                                                            
Query: 242    tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 138316 tagtcgatggacaacaggtgaatattcctgtactaccccttgttgg 138271



 Score =  488 bits (246), Expect = e-135
 Identities = 276/286 (96%)
 Strand = Plus / Plus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
              ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 110743 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagg 110802

                                                                          
Query: 62     ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
              |||||||||||||||||||||||||| |||||| ||| ||||| ||||||||||||||||
Sbjct: 110803 ggagcgttccgccttagagggaagcacccgcgagagcaggggtggacgaagcggaagcga 110862

                                                                          
Query: 122    gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
              |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 110863 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 110922

                                                                          
Query: 182    ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110923 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 110982

                                                            
Query: 242    tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 110983 tagtcgatggacaacaggtgaatattcctgtactaccccttgttgg 111028

---

>emb|AJ879453.1| Acorus calamus chloroplast, complete genome
          Length = 153821

 Score =  480 bits (242), Expect = e-132
 Identities = 275/286 (96%)
 Strand = Plus / Minus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
              ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 133070 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtagg 133011

                                                                          
Query: 62     ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
              ||||||||||||||||||| |||||| ||||| |||| || || ||||||||||||||||
Sbjct: 133010 ggagcgttccgccttagagagaagcacccgcgcaagcaggtgtggacgaagcggaagcga 132951

                                                                          
Query: 122    gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
              |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 132950 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 132891

                                                                          
Query: 182    ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132890 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 132831

                                                            
Query: 242    tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 132830 tagtcgatggacaacaggtgaatattcctgtactaccccttgttgg 132785



 Score =  480 bits (242), Expect = e-132
 Identities = 275/286 (96%)
 Strand = Plus / Plus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
              ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 104901 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtagg 104960

                                                                          
Query: 62     ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
              ||||||||||||||||||| |||||| ||||| |||| || || ||||||||||||||||
Sbjct: 104961 ggagcgttccgccttagagagaagcacccgcgcaagcaggtgtggacgaagcggaagcga 105020

                                                                          
Query: 122    gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
              |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 105021 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 105080

                                                                          
Query: 182    ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105081 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 105140

                                                            
Query: 242    tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 105141 tagtcgatggacaacaggtgaatattcctgtactaccccttgttgg 105186

---

>gb|DQ481232.1| Populus suaveolens unknown gene
          Length = 854

 Score =  472 bits (238), Expect = e-130
 Identities = 275/286 (96%), Gaps = 1/286 (0%)
 Strand = Plus / Plus

                                                                       
Query: 2   gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 105 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtagg 164

                                                                       
Query: 62  ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
           |||||||||||| ||||||||||||| |||||  ||||||||| ||||||||||||||||
Sbjct: 165 ggagcgttccgc-ttagagggaagcacccgcgcgagcgggggtggacgaagcggaagcga 223

                                                                       
Query: 122 gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
           |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 224 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 283

                                                                       
Query: 182 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 343

                                                         
Query: 242 tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
           ||||||||||||||||||  ||||||||||||||||||||||||||
Sbjct: 344 tagtcgatggacaacaggcgaatattcctgtactaccccttgttgg 389

---

>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome
          Length = 159930

 Score =  472 bits (238), Expect = e-130
 Identities = 274/286 (95%)
 Strand = Plus / Minus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
              ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 138427 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtagg 138368

                                                                          
Query: 62     ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
              ||||||||||||||||||| |||||| |||||  ||| || || ||||||||||||||||
Sbjct: 138367 ggagcgttccgccttagagtgaagcacccgcgcgagcaggtgtggacgaagcggaagcga 138308

                                                                          
Query: 122    gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
              |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 138307 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 138248

                                                                          
Query: 182    ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138247 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 138188

                                                            
Query: 242    tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 138187 tagtcgatggacaacaggtgaatattcctgtactaccccttgttgg 138142



 Score =  472 bits (238), Expect = e-130
 Identities = 274/286 (95%)
 Strand = Plus / Plus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
              ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 111518 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtagg 111577

                                                                          
Query: 62     ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
              ||||||||||||||||||| |||||| |||||  ||| || || ||||||||||||||||
Sbjct: 111578 ggagcgttccgccttagagtgaagcacccgcgcgagcaggtgtggacgaagcggaagcga 111637

                                                                          
Query: 122    gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
              |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 111638 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 111697

                                                                          
Query: 182    ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111698 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 111757

                                                            
Query: 242    tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 111758 tagtcgatggacaacaggtgaatattcctgtactaccccttgttgg 111803



 Score = 48.1 bits (24), Expect = 0.015
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 199    tccacggagggtgagtcagggcct 222
              ||||||||||||||||||||||||
Sbjct: 144327 tccacggagggtgagtcagggcct 144304



 Score = 48.1 bits (24), Expect = 0.015
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 199    tccacggagggtgagtcagggcct 222
              ||||||||||||||||||||||||
Sbjct: 105618 tccacggagggtgagtcagggcct 105641

---

>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence
          Length = 162686

 Score =  472 bits (238), Expect = e-130
 Identities = 274/286 (95%)
 Strand = Plus / Minus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
              ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 140954 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtagg 140895

                                                                          
Query: 62     ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
              ||||||||||||||||||| |||||| |||||  ||| || || ||||||||||||||||
Sbjct: 140894 ggagcgttccgccttagagtgaagcacccgcgcgagcaggtgtggacgaagcggaagcga 140835

                                                                          
Query: 122    gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
              |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 140834 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 140775

                                                                          
Query: 182    ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140774 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 140715

                                                            
Query: 242    tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 140714 tagtcgatggacaacaggtgaatattcctgtactaccccttgttgg 140669



 Score =  472 bits (238), Expect = e-130
 Identities = 274/286 (95%)
 Strand = Plus / Plus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
              ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 112703 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtagg 112762

                                                                          
Query: 62     ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
              ||||||||||||||||||| |||||| |||||  ||| || || ||||||||||||||||
Sbjct: 112763 ggagcgttccgccttagagtgaagcacccgcgcgagcaggtgtggacgaagcggaagcga 112822

                                                                          
Query: 122    gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
              |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 112823 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 112882

                                                                          
Query: 182    ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112883 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 112942

                                                            
Query: 242    tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 112943 tagtcgatggacaacaggtgaatattcctgtactaccccttgttgg 112988

---

>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome
          Length = 152772

 Score =  464 bits (234), Expect = e-128
 Identities = 273/286 (95%)
 Strand = Plus / Minus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
              ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 131622 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagg 131563

                                                                          
Query: 62     ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
              ||||||||||||||||||| |||||| |||||  |||||  || ||||||||||||||||
Sbjct: 131562 ggagcgttccgccttagagtgaagcacccgcgcgagcggtagtggacgaagcggaagcga 131503

                                                                          
Query: 122    gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
              |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 131502 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 131443

                                                                          
Query: 182    ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131442 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 131383

                                                            
Query: 242    tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 131382 tagtcgatggacaacaggtgaatattcctgtactaccccttgttgg 131337



 Score =  464 bits (234), Expect = e-128
 Identities = 273/286 (95%)
 Strand = Plus / Plus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
              ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 105256 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagg 105315

                                                                          
Query: 62     ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
              ||||||||||||||||||| |||||| |||||  |||||  || ||||||||||||||||
Sbjct: 105316 ggagcgttccgccttagagtgaagcacccgcgcgagcggtagtggacgaagcggaagcga 105375

                                                                          
Query: 122    gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
              |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 105376 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 105435

                                                                          
Query: 182    ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105436 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 105495

                                                            
Query: 242    tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 105496 tagtcgatggacaacaggtgaatattcctgtactaccccttgttgg 105541

---

>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome
          Length = 151104

 Score =  464 bits (234), Expect = e-128
 Identities = 273/286 (95%)
 Strand = Plus / Minus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
              ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 130514 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagg 130455

                                                                          
Query: 62     ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
              ||||||||||||||||||| |||||| |||||  |||||  || ||||||||||||||||
Sbjct: 130454 ggagcgttccgccttagagtgaagcacccgcgcgagcggtagtggacgaagcggaagcga 130395

                                                                          
Query: 122    gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
              |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 130394 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 130335

                                                                          
Query: 182    ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130334 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 130275

                                                            
Query: 242    tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 130274 tagtcgatggacaacaggtgaatattcctgtactaccccttgttgg 130229



 Score =  464 bits (234), Expect = e-128
 Identities = 273/286 (95%)
 Strand = Plus / Plus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
              ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 104121 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagg 104180

                                                                          
Query: 62     ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
              ||||||||||||||||||| |||||| |||||  |||||  || ||||||||||||||||
Sbjct: 104181 ggagcgttccgccttagagtgaagcacccgcgcgagcggtagtggacgaagcggaagcga 104240

                                                                          
Query: 122    gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
              |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 104241 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 104300

                                                                          
Query: 182    ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 104301 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 104360

                                                            
Query: 242    tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 104361 tagtcgatggacaacaggtgaatattcctgtactaccccttgttgg 104406

---

>emb|AJ970307.1| Cucumis sativus chloroplast complete genome
          Length = 155293

 Score =  464 bits (234), Expect = e-128
 Identities = 273/286 (95%)
 Strand = Plus / Minus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
              ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 134748 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtagg 134689

                                                                          
Query: 62     ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
              |||||||||||||||||||||||||| | |||  ||| |  || ||||||||||||||||
Sbjct: 134688 ggagcgttccgccttagagggaagcacctgcgcgagcagttgtggacgaagcggaagcga 134629

                                                                          
Query: 122    gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
              |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 134628 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 134569

                                                                          
Query: 182    ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134568 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 134509

                                                            
Query: 242    tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 134508 tagtcgatggacaacaggtgaatattcctgtactaccccttgttgg 134463



 Score =  464 bits (234), Expect = e-128
 Identities = 273/286 (95%)
 Strand = Plus / Plus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
              ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 107158 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtagg 107217

                                                                          
Query: 62     ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
              |||||||||||||||||||||||||| | |||  ||| |  || ||||||||||||||||
Sbjct: 107218 ggagcgttccgccttagagggaagcacctgcgcgagcagttgtggacgaagcggaagcga 107277

                                                                          
Query: 122    gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
              |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 107278 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 107337

                                                                          
Query: 182    ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107338 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 107397

                                                            
Query: 242    tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 107398 tagtcgatggacaacaggtgaatattcctgtactaccccttgttgg 107443

---

>gb|AY582139.1| Panax ginseng chloroplast, complete genome
          Length = 156318

 Score =  464 bits (234), Expect = e-128
 Identities = 273/286 (95%)
 Strand = Plus / Minus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
              ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 135439 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagg 135380

                                                                          
Query: 62     ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
              |||||||||||||||||||||||| | |||||  |||||  || ||||||||||||||||
Sbjct: 135379 ggagcgttccgccttagagggaagtacccgcgcgagcggtagtggacgaagcggaagcga 135320

                                                                          
Query: 122    gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
              |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 135319 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 135260

                                                                          
Query: 182    ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135259 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 135200

                                                            
Query: 242    tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 135199 tagtcgatggacaacaggtgaatattcctgtactaccccttgttgg 135154



 Score =  464 bits (234), Expect = e-128
 Identities = 273/286 (95%)
 Strand = Plus / Plus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
              ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 106986 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagg 107045

                                                                          
Query: 62     ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
              |||||||||||||||||||||||| | |||||  |||||  || ||||||||||||||||
Sbjct: 107046 ggagcgttccgccttagagggaagtacccgcgcgagcggtagtggacgaagcggaagcga 107105

                                                                          
Query: 122    gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
              |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 107106 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 107165

                                                                          
Query: 182    ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107166 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 107225

                                                            
Query: 242    tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 107226 tagtcgatggacaacaggtgaatattcctgtactaccccttgttgg 107271

---

>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome
          Length = 155527

 Score =  464 bits (234), Expect = e-128
 Identities = 273/286 (95%)
 Strand = Plus / Minus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
              ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 135027 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtagg 134968

                                                                          
Query: 62     ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
              |||||||||||||||||||||||||| | |||  ||| |  || ||||||||||||||||
Sbjct: 134967 ggagcgttccgccttagagggaagcacctgcgcgagcagttgtggacgaagcggaagcga 134908

                                                                          
Query: 122    gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
              |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 134907 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 134848

                                                                          
Query: 182    ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134847 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 134788

                                                            
Query: 242    tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 134787 tagtcgatggacaacaggtgaatattcctgtactaccccttgttgg 134742



 Score =  464 bits (234), Expect = e-128
 Identities = 273/286 (95%)
 Strand = Plus / Plus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
              ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 107380 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtagg 107439

                                                                          
Query: 62     ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
              |||||||||||||||||||||||||| | |||  ||| |  || ||||||||||||||||
Sbjct: 107440 ggagcgttccgccttagagggaagcacctgcgcgagcagttgtggacgaagcggaagcga 107499

                                                                          
Query: 122    gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
              |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 107500 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 107559

                                                                          
Query: 182    ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107560 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 107619

                                                            
Query: 242    tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 107620 tagtcgatggacaacaggtgaatattcctgtactaccccttgttgg 107665

---

>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome
          Length = 152765

 Score =  464 bits (234), Expect = e-128
 Identities = 273/286 (95%)
 Strand = Plus / Minus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
              ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 131615 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagg 131556

                                                                          
Query: 62     ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
              ||||||||||||||||||| |||||| |||||  |||||  || ||||||||||||||||
Sbjct: 131555 ggagcgttccgccttagagtgaagcacccgcgcgagcggtagtggacgaagcggaagcga 131496

                                                                          
Query: 122    gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
              |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 131495 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 131436

                                                                          
Query: 182    ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131435 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 131376

                                                            
Query: 242    tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 131375 tagtcgatggacaacaggtgaatattcctgtactaccccttgttgg 131330



 Score =  464 bits (234), Expect = e-128
 Identities = 273/286 (95%)
 Strand = Plus / Plus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
              ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 105254 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagg 105313

                                                                          
Query: 62     ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
              ||||||||||||||||||| |||||| |||||  |||||  || ||||||||||||||||
Sbjct: 105314 ggagcgttccgccttagagtgaagcacccgcgcgagcggtagtggacgaagcggaagcga 105373

                                                                          
Query: 122    gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
              |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 105374 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 105433

                                                                          
Query: 182    ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105434 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 105493

                                                            
Query: 242    tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 105494 tagtcgatggacaacaggtgaatattcctgtactaccccttgttgg 105539

---

>dbj|AK059795.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E09, full
           insert sequence
          Length = 819

 Score =  460 bits (232), Expect = e-126
 Identities = 232/232 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 635

                                                                       
Query: 61  gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 695

                                                                       
Query: 121 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 755

                                                               
Query: 181 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 232
           ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 807

---

>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA
          Length = 155943

 Score =  456 bits (230), Expect = e-125
 Identities = 272/286 (95%)
 Strand = Plus / Minus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
              ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 135147 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagg 135088

                                                                          
Query: 62     ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
              ||||||||||||||||||| |||||  |||||  ||||| ||| ||||||||||||||||
Sbjct: 135087 ggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcga 135028

                                                                          
Query: 122    gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
              |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 135027 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 134968

                                                                          
Query: 182    ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134967 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 134908

                                                            
Query: 242    tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              ||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 134907 tagtcgatggacaacaggtgaatattcctgtactgccccttgttgg 134862



 Score =  456 bits (230), Expect = e-125
 Identities = 272/286 (95%)
 Strand = Plus / Plus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
              ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 107483 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagg 107542

                                                                          
Query: 62     ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
              ||||||||||||||||||| |||||  |||||  ||||| ||| ||||||||||||||||
Sbjct: 107543 ggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcga 107602

                                                                          
Query: 122    gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
              |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 107603 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 107662

                                                                          
Query: 182    ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107663 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 107722

                                                            
Query: 242    tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              ||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 107723 tagtcgatggacaacaggtgaatattcctgtactgccccttgttgg 107768

---

>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome
          Length = 153337

 Score =  456 bits (230), Expect = e-125
 Identities = 273/286 (95%), Gaps = 1/286 (0%)
 Strand = Plus / Minus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
              ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 133838 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtagg 133779

                                                                          
Query: 62     ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
              |||||||||||| ||||||||||||  |||||  ||| || || ||||||||||||||||
Sbjct: 133778 ggagcgttccgc-ttagagggaagctcccgcgcgagcaggtgtggacgaagcggaagcga 133720

                                                                          
Query: 122    gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
              |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 133719 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 133660

                                                                          
Query: 182    ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133659 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 133600

                                                            
Query: 242    tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 133599 tagtcgatggacaacaggtgaatattcctgtactaccccttgttgg 133554



 Score =  456 bits (230), Expect = e-125
 Identities = 273/286 (95%), Gaps = 1/286 (0%)
 Strand = Plus / Plus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
              ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 106444 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtagg 106503

                                                                          
Query: 62     ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
              |||||||||||| ||||||||||||  |||||  ||| || || ||||||||||||||||
Sbjct: 106504 ggagcgttccgc-ttagagggaagctcccgcgcgagcaggtgtggacgaagcggaagcga 106562

                                                                          
Query: 122    gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
              |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 106563 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 106622

                                                                          
Query: 182    ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106623 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 106682

                                                            
Query: 242    tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 106683 tagtcgatggacaacaggtgaatattcctgtactaccccttgttgg 106728

---

>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence
          Length = 163935

 Score =  456 bits (230), Expect = e-125
 Identities = 272/286 (95%)
 Strand = Plus / Minus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
              ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 141726 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagg 141667

                                                                          
Query: 62     ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
              ||||||||||||||||||| |||||  |||||  ||||| ||| ||||||||||||||||
Sbjct: 141666 ggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcga 141607

                                                                          
Query: 122    gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
              |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 141606 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 141547

                                                                          
Query: 182    ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141546 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 141487

                                                            
Query: 242    tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              ||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 141486 tagtcgatggacaacaggtgaatattcctgtactgccccttgttgg 141441



 Score =  456 bits (230), Expect = e-125
 Identities = 272/286 (95%)
 Strand = Plus / Plus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
              ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 111602 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagg 111661

                                                                          
Query: 62     ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
              ||||||||||||||||||| |||||  |||||  ||||| ||| ||||||||||||||||
Sbjct: 111662 ggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcga 111721

                                                                          
Query: 122    gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
              |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 111722 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 111781

                                                                          
Query: 182    ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111782 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 111841

                                                            
Query: 242    tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              ||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 111842 tagtcgatggacaacaggtgaatattcctgtactgccccttgttgg 111887

---

>gb|AY123764.1| Nicotiana tabacum chloroplast 16S ribosomal RNA-23S ribosomal RNA
            intergenic spacer region and 23S ribosomal RNA gene,
            partial sequences
          Length = 3735

 Score =  456 bits (230), Expect = e-125
 Identities = 272/286 (95%)
 Strand = Plus / Plus

                                                                        
Query: 2    gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
            ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 2677 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagg 2736

                                                                        
Query: 62   ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
            ||||||||||||||||||| |||||  |||||  ||||| ||| ||||||||||||||||
Sbjct: 2737 ggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcga 2796

                                                                        
Query: 122  gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
            |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 2797 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 2856

                                                                        
Query: 182  ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2857 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 2916

                                                          
Query: 242  tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
            ||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 2917 tagtcgatggacaacaggtgaatattcctgtactgccccttgttgg 2962

---

>gb|AY029747.1| Populus deltoides 23S ribosomal RNA, 4.5S ribosomal RNA, and 5S
            ribosomal RNA genes, complete sequence; chloroplast genes
            for chloroplast products
          Length = 5157

 Score =  456 bits (230), Expect = e-125
 Identities = 272/286 (95%)
 Strand = Plus / Plus

                                                                        
Query: 2    gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
            ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 2922 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagg 2981

                                                                        
Query: 62   ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
            ||||||||||||||||||| |||||  |||||  ||||| ||| ||||||||||||||||
Sbjct: 2982 ggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcga 3041

                                                                        
Query: 122  gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
            |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 3042 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 3101

                                                                        
Query: 182  ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3102 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 3161

                                                          
Query: 242  tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
            ||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 3162 tagtcgatggacaacaggtgaatattcctgtactgccccttgttgg 3207

---

>gb|AF393587.1| Climacium dendroides large subunit ribosomal RNA (rrl) gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 3020

 Score =  456 bits (230), Expect = e-125
 Identities = 272/286 (95%)
 Strand = Plus / Plus

                                                                        
Query: 2    gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
            ||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 1157 gaagatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaatacatcggtagg 1216

                                                                        
Query: 62   ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
            |||||||||||||||||||||||||| | |||  ||| || || ||||||||||||||||
Sbjct: 1217 ggagcgttccgccttagagggaagcatcagcgcgagcaggtgtggacgaagcggaagcga 1276

                                                                        
Query: 122  gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
            |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 1277 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 1336

                                                                        
Query: 182  ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1337 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 1396

                                                          
Query: 242  tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
            ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1397 tagtcgatggacaacaggtgaatattcctgtactaccccttgttgg 1442

---

>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence
          Length = 155941

 Score =  456 bits (230), Expect = e-125
 Identities = 272/286 (95%)
 Strand = Plus / Minus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
              ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 135145 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagg 135086

                                                                          
Query: 62     ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
              ||||||||||||||||||| |||||  |||||  ||||| ||| ||||||||||||||||
Sbjct: 135085 ggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcga 135026

                                                                          
Query: 122    gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
              |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 135025 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 134966

                                                                          
Query: 182    ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134965 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 134906

                                                            
Query: 242    tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              ||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 134905 tagtcgatggacaacaggtgaatattcctgtactgccccttgttgg 134860



 Score =  456 bits (230), Expect = e-125
 Identities = 272/286 (95%)
 Strand = Plus / Plus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
              ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 107481 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagg 107540

                                                                          
Query: 62     ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
              ||||||||||||||||||| |||||  |||||  ||||| ||| ||||||||||||||||
Sbjct: 107541 ggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcga 107600

                                                                          
Query: 122    gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
              |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 107601 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 107660

                                                                          
Query: 182    ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107661 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 107720

                                                            
Query: 242    tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              ||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 107721 tagtcgatggacaacaggtgaatattcctgtactgccccttgttgg 107766

---

>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome
          Length = 122890

 Score =  456 bits (230), Expect = e-125
 Identities = 272/286 (95%)
 Strand = Plus / Minus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
              ||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 116992 gaagatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaatacatcggtagg 116933

                                                                          
Query: 62     ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
              |||||||||||||||||||||||||| | |||  ||| || || ||||||||||||||||
Sbjct: 116932 ggagcgttccgccttagagggaagcatcagcgcgagcaggtgtggacgaagcggaagcga 116873

                                                                          
Query: 122    gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
              |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 116872 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 116813

                                                                          
Query: 182    ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116812 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 116753

                                                            
Query: 242    tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 116752 tagtcgatggacaacaggtgaatattcctgtactaccccttgttgg 116707



 Score =  456 bits (230), Expect = e-125
 Identities = 272/286 (95%)
 Strand = Plus / Plus

                                                                         
Query: 2     gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
             ||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 91110 gaagatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaatacatcggtagg 91169

                                                                         
Query: 62    ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
             |||||||||||||||||||||||||| | |||  ||| || || ||||||||||||||||
Sbjct: 91170 ggagcgttccgccttagagggaagcatcagcgcgagcaggtgtggacgaagcggaagcga 91229

                                                                         
Query: 122   gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
             |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 91230 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 91289

                                                                         
Query: 182   ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91290 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 91349

                                                           
Query: 242   tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
             ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 91350 tagtcgatggacaacaggtgaatattcctgtactaccccttgttgg 91395

---

>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence
          Length = 155745

 Score =  456 bits (230), Expect = e-125
 Identities = 272/286 (95%)
 Strand = Plus / Minus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
              ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 134876 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagg 134817

                                                                          
Query: 62     ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
              ||||||||||||||||||| |||||  |||||  ||||| ||| ||||||||||||||||
Sbjct: 134816 ggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcga 134757

                                                                          
Query: 122    gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
              |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 134756 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 134697

                                                                          
Query: 182    ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134696 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 134637

                                                            
Query: 242    tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              ||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 134636 tagtcgatggacaacaggtgaatattcctgtactgccccttgttgg 134591



 Score =  456 bits (230), Expect = e-125
 Identities = 272/286 (95%)
 Strand = Plus / Plus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
              ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 107262 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagg 107321

                                                                          
Query: 62     ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
              ||||||||||||||||||| |||||  |||||  ||||| ||| ||||||||||||||||
Sbjct: 107322 ggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcga 107381

                                                                          
Query: 122    gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
              |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 107382 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 107441

                                                                          
Query: 182    ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107442 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 107501

                                                            
Query: 242    tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              ||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 107502 tagtcgatggacaacaggtgaatattcctgtactgccccttgttgg 107547

---

>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome
          Length = 155298

 Score =  452 bits (228), Expect = e-124
 Identities = 270/284 (95%)
 Strand = Plus / Minus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
              ||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||
Sbjct: 134393 gaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtagg 134334

                                                                          
Query: 62     ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
              ||||||||||||||||||| |||||  |||||  ||||| ||| ||||||||||||||||
Sbjct: 134333 ggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcga 134274

                                                                          
Query: 122    gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
              |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 134273 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 134214

                                                                          
Query: 182    ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134213 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 134154

                                                          
Query: 242    tagtcgatggacaacaggtcaatattcctgtactaccccttgtt 285
              ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 134153 tagtcgatggacaacaggtgaatattcctgtactaccccttgtt 134110



 Score =  452 bits (228), Expect = e-124
 Identities = 270/284 (95%)
 Strand = Plus / Plus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
              ||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||
Sbjct: 106643 gaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtagg 106702

                                                                          
Query: 62     ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
              ||||||||||||||||||| |||||  |||||  ||||| ||| ||||||||||||||||
Sbjct: 106703 ggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcga 106762

                                                                          
Query: 122    gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
              |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 106763 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 106822

                                                                          
Query: 182    ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106823 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 106882

                                                          
Query: 242    tagtcgatggacaacaggtcaatattcctgtactaccccttgtt 285
              ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 106883 tagtcgatggacaacaggtgaatattcctgtactaccccttgtt 106926

---

>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome
          Length = 155460

 Score =  452 bits (228), Expect = e-124
 Identities = 270/284 (95%)
 Strand = Plus / Minus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
              ||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||
Sbjct: 134528 gaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtagg 134469

                                                                          
Query: 62     ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
              ||||||||||||||||||| |||||  |||||  ||||| ||| ||||||||||||||||
Sbjct: 134468 ggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcga 134409

                                                                          
Query: 122    gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
              |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 134408 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 134349

                                                                          
Query: 182    ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134348 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 134289

                                                          
Query: 242    tagtcgatggacaacaggtcaatattcctgtactaccccttgtt 285
              ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 134288 tagtcgatggacaacaggtgaatattcctgtactaccccttgtt 134245



 Score =  452 bits (228), Expect = e-124
 Identities = 270/284 (95%)
 Strand = Plus / Plus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
              ||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||
Sbjct: 106815 gaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtagg 106874

                                                                          
Query: 62     ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
              ||||||||||||||||||| |||||  |||||  ||||| ||| ||||||||||||||||
Sbjct: 106875 ggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcga 106934

                                                                          
Query: 122    gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
              |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 106935 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 106994

                                                                          
Query: 182    ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106995 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 107054

                                                          
Query: 242    tagtcgatggacaacaggtcaatattcctgtactaccccttgtt 285
              ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 107055 tagtcgatggacaacaggtgaatattcctgtactaccccttgtt 107098

---

>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome
          Length = 155461

 Score =  452 bits (228), Expect = e-124
 Identities = 270/284 (95%)
 Strand = Plus / Minus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
              ||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||
Sbjct: 134526 gaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtagg 134467

                                                                          
Query: 62     ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
              ||||||||||||||||||| |||||  |||||  ||||| ||| ||||||||||||||||
Sbjct: 134466 ggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcga 134407

                                                                          
Query: 122    gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
              |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 134406 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 134347

                                                                          
Query: 182    ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134346 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 134287

                                                          
Query: 242    tagtcgatggacaacaggtcaatattcctgtactaccccttgtt 285
              ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 134286 tagtcgatggacaacaggtgaatattcctgtactaccccttgtt 134243



 Score =  452 bits (228), Expect = e-124
 Identities = 270/284 (95%)
 Strand = Plus / Plus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
              ||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||
Sbjct: 106812 gaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtagg 106871

                                                                          
Query: 62     ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
              ||||||||||||||||||| |||||  |||||  ||||| ||| ||||||||||||||||
Sbjct: 106872 ggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcga 106931

                                                                          
Query: 122    gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
              |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 106932 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 106991

                                                                          
Query: 182    ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106992 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 107051

                                                          
Query: 242    tagtcgatggacaacaggtcaatattcctgtactaccccttgtt 285
              ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 107052 tagtcgatggacaacaggtgaatattcctgtactaccccttgtt 107095

---

>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome
          Length = 155371

 Score =  452 bits (228), Expect = e-124
 Identities = 270/284 (95%)
 Strand = Plus / Minus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
              ||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||
Sbjct: 134438 gaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtagg 134379

                                                                          
Query: 62     ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
              ||||||||||||||||||| |||||  |||||  ||||| ||| ||||||||||||||||
Sbjct: 134378 ggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcga 134319

                                                                          
Query: 122    gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
              |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 134318 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 134259

                                                                          
Query: 182    ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134258 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 134199

                                                          
Query: 242    tagtcgatggacaacaggtcaatattcctgtactaccccttgtt 285
              ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 134198 tagtcgatggacaacaggtgaatattcctgtactaccccttgtt 134155



 Score =  452 bits (228), Expect = e-124
 Identities = 270/284 (95%)
 Strand = Plus / Plus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
              ||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||
Sbjct: 106690 gaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtagg 106749

                                                                          
Query: 62     ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
              ||||||||||||||||||| |||||  |||||  ||||| ||| ||||||||||||||||
Sbjct: 106750 ggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcga 106809

                                                                          
Query: 122    gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
              |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 106810 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 106869

                                                                          
Query: 182    ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106870 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 106929

                                                          
Query: 242    tagtcgatggacaacaggtcaatattcctgtactaccccttgtt 285
              ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 106930 tagtcgatggacaacaggtgaatattcctgtactaccccttgtt 106973

---

>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome
          Length = 155312

 Score =  452 bits (228), Expect = e-124
 Identities = 270/284 (95%)
 Strand = Plus / Minus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
              ||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||
Sbjct: 134405 gaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtagg 134346

                                                                          
Query: 62     ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
              ||||||||||||||||||| |||||  |||||  ||||| ||| ||||||||||||||||
Sbjct: 134345 ggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcga 134286

                                                                          
Query: 122    gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
              |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 134285 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 134226

                                                                          
Query: 182    ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134225 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 134166

                                                          
Query: 242    tagtcgatggacaacaggtcaatattcctgtactaccccttgtt 285
              ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 134165 tagtcgatggacaacaggtgaatattcctgtactaccccttgtt 134122



 Score =  452 bits (228), Expect = e-124
 Identities = 270/284 (95%)
 Strand = Plus / Plus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
              ||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||
Sbjct: 106657 gaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaatacatcggtagg 106716

                                                                          
Query: 62     ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
              ||||||||||||||||||| |||||  |||||  ||||| ||| ||||||||||||||||
Sbjct: 106717 ggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcga 106776

                                                                          
Query: 122    gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
              |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 106777 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 106836

                                                                          
Query: 182    ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106837 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 106896

                                                          
Query: 242    tagtcgatggacaacaggtcaatattcctgtactaccccttgtt 285
              ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 106897 tagtcgatggacaacaggtgaatattcctgtactaccccttgtt 106940

---

>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan)
          Length = 156687

 Score =  448 bits (226), Expect = e-123
 Identities = 271/286 (94%)
 Strand = Plus / Minus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
              ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 135785 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagg 135726

                                                                          
Query: 62     ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
              |||||||||||||||| || |||||  |||||  ||||| ||| ||||||||||||||||
Sbjct: 135725 ggagcgttccgccttatagagaagcctccgcgcgagcggtggtggacgaagcggaagcga 135666

                                                                          
Query: 122    gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
              |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 135665 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 135606

                                                                          
Query: 182    ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135605 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 135546

                                                            
Query: 242    tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              ||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 135545 tagtcgatggacaacaggtgaatattcctgtactgccccttgttgg 135500



 Score =  448 bits (226), Expect = e-123
 Identities = 271/286 (94%)
 Strand = Plus / Plus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
              ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 107772 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagg 107831

                                                                          
Query: 62     ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
              |||||||||||||||| || |||||  |||||  ||||| ||| ||||||||||||||||
Sbjct: 107832 ggagcgttccgccttatagagaagcctccgcgcgagcggtggtggacgaagcggaagcga 107891

                                                                          
Query: 122    gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
              |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 107892 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 107951

                                                                          
Query: 182    ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107952 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 108011

                                                            
Query: 242    tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              ||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 108012 tagtcgatggacaacaggtgaatattcctgtactgccccttgttgg 108057

---

>gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0042L15, from chromosome 3, complete sequence
          Length = 172475

 Score =  448 bits (226), Expect = e-123
 Identities = 226/226 (100%)
 Strand = Plus / Minus

                                                                         
Query: 1     tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63715 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 63656

                                                                         
Query: 61    gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63655 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 63596

                                                                         
Query: 121   agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63595 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 63536

                                                           
Query: 181   tttcctccgcaaggttcgtccacggagggtgagtcagggcctaaga 226
             ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63535 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaaga 63490

---

>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome
          Length = 116866

 Score =  448 bits (226), Expect = e-123
 Identities = 271/286 (94%)
 Strand = Plus / Plus

                                                                         
Query: 2     gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
             ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 87415 gaagatgaacgggactaagcgatctgccgaagctgtgggatgtcaaaatacatcggtagg 87474

                                                                         
Query: 62    ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
             |||||||||||||| |||| |||||| | |||  ||| || || ||||||||||||||||
Sbjct: 87475 ggagcgttccgcctcagagagaagcaccggcgcgagcaggtgtggacgaagcggaagcga 87534

                                                                         
Query: 122   gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
             |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 87535 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 87594

                                                                         
Query: 182   ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87595 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 87654

                                                           
Query: 242   tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
             ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 87655 tagtcgatggacaacaggtgaatattcctgtactaccccttgttgg 87700

---

>dbj|AK060845.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D12, full
            insert sequence
          Length = 1463

 Score =  448 bits (226), Expect = e-123
 Identities = 226/226 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1    tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 954  tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 1013

                                                                        
Query: 61   gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1014 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 1073

                                                                        
Query: 121  agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1074 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaagg 1133

                                                          
Query: 181  tttcctccgcaaggttcgtccacggagggtgagtcagggcctaaga 226
            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1134 tttcctccgcaaggttcgtccacggagggtgagtcagggcctaaga 1179

---

>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome
          Length = 150519

 Score =  448 bits (226), Expect = e-123
 Identities = 271/286 (94%)
 Strand = Plus / Minus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
              ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||
Sbjct: 129377 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgaatcggtagg 129318

                                                                          
Query: 62     ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
              |||||||||||||||||||||||| | |||||  ||| | ||| ||||||||||||||||
Sbjct: 129317 ggagcgttccgccttagagggaagtacccgcgcgagcagtggtggacgaagcggaagcga 129258

                                                                          
Query: 122    gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
              |||||||||||||||||||| |||| ||||||||||||||||||| |||||||| |||| 
Sbjct: 129257 gaatgtcggcttgagtaacgcaaacgttggtgagaatccaatgcctcgaaaacctaaggg 129198

                                                                          
Query: 182    ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129197 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 129138

                                                            
Query: 242    tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 129137 tagtcgatggacaacaggtgaatattcctgtactaccccttgttgg 129092



 Score =  448 bits (226), Expect = e-123
 Identities = 271/286 (94%)
 Strand = Plus / Plus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
              ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||
Sbjct: 103079 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgaatcggtagg 103138

                                                                          
Query: 62     ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
              |||||||||||||||||||||||| | |||||  ||| | ||| ||||||||||||||||
Sbjct: 103139 ggagcgttccgccttagagggaagtacccgcgcgagcagtggtggacgaagcggaagcga 103198

                                                                          
Query: 122    gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
              |||||||||||||||||||| |||| ||||||||||||||||||| |||||||| |||| 
Sbjct: 103199 gaatgtcggcttgagtaacgcaaacgttggtgagaatccaatgcctcgaaaacctaaggg 103258

                                                                          
Query: 182    ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103259 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 103318

                                                            
Query: 242    tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 103319 tagtcgatggacaacaggtgaatattcctgtactaccccttgttgg 103364

---

>gb|M75722.1|ALSCP23SA Alnus incana chloroplast 23S ribosomal RNA (23S rRNA) gene
          Length = 2811

 Score =  448 bits (226), Expect = e-123
 Identities = 271/286 (94%)
 Strand = Plus / Plus

                                                                        
Query: 2    gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
            ||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 1154 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaaggcatcggtagg 1213

                                                                        
Query: 62   ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
            ||||||||||||||||| |||||||| | |||  ||| | ||| ||||||||||||||||
Sbjct: 1214 ggagcgttccgccttagggggaagcacctgcgcgagcagcggtagacgaagcggaagcga 1273

                                                                        
Query: 122  gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
            |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 1274 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 1333

                                                                        
Query: 182  ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1334 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 1393

                                                          
Query: 242  tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
            ||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 1394 tagtcgatggacaacaggtgaatattcctgtactgccccttgttgg 1439

---

>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence
          Length = 119707

 Score =  448 bits (226), Expect = e-123
 Identities = 271/286 (94%)
 Strand = Plus / Plus

                                                                         
Query: 2     gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
             ||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 89502 gaagatgaacgggactaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagg 89561

                                                                         
Query: 62    ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
             |||||||||||||| ||||||||||| | |||  ||| || || ||||||||||||||||
Sbjct: 89562 ggagcgttccgcctcagagggaagcaccggcgcgagcaggtgtggacgaagcggaagcga 89621

                                                                         
Query: 122   gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
             |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 89622 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 89681

                                                                         
Query: 182   ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89682 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 89741

                                                           
Query: 242   tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
             ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 89742 tagtcgatggacaacaggtgaatattcctgtactaccccttgttgg 89787

---

>gb|J01446.1|TOBCPRG23 Tobacco chloroplast 23S and 4.5S rRNA genes
          Length = 3166

 Score =  440 bits (222), Expect = e-120
 Identities = 271/286 (94%), Gaps = 1/286 (0%)
 Strand = Plus / Plus

                                                                        
Query: 2    gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
            ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 1250 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagg 1309

                                                                        
Query: 62   ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
            ||||||||||||||||||| |||||  |||||  ||||| ||| ||||||||||||||||
Sbjct: 1310 ggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcga 1369

                                                                        
Query: 122  gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
            |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 1370 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 1429

                                                                        
Query: 182  ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 1430 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggc- 1488

                                                          
Query: 242  tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
            ||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 1489 tagtcgatggacaacaggtgaatattcctgtactgccccttgttgg 1534

---

>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence
          Length = 110949

 Score =  432 bits (218), Expect = e-118
 Identities = 269/286 (94%)
 Strand = Plus / Plus

                                                                        
Query: 2    gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
            ||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||||
Sbjct: 5373 gaagatgaacggggctaagcgatctgccgaagctgtgggatctaaaaatgaatcggtagg 5432

                                                                        
Query: 62   ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
            ||||||||||||||||||  |||| | |||||  ||| ||| | ||||||||||||||||
Sbjct: 5433 ggagcgttccgccttagaacgaagtacccgcgcgagcagggttggacgaagcggaagcga 5492

                                                                        
Query: 122  gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
            |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 5493 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 5552

                                                                        
Query: 182  ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5553 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 5612

                                                          
Query: 242  tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
            ||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 5613 tagtcgatggacaacaggtgaatattcctgtactacctcttgttgg 5658

---

>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence
          Length = 124033

 Score =  432 bits (218), Expect = e-118
 Identities = 269/286 (94%)
 Strand = Plus / Minus

                                                                         
Query: 2     gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
             ||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||||
Sbjct: 22552 gaagatgaacggggctaagcgatctgccgaagctgtgggatctaaaaatgaatcggtagg 22493

                                                                         
Query: 62    ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
             ||||||||||||||||||  |||| | |||||  ||| ||| | ||||||||||||||||
Sbjct: 22492 ggagcgttccgccttagaacgaagtacccgcgcgagcagggttggacgaagcggaagcga 22433

                                                                         
Query: 122   gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
             |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 22432 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 22373

                                                                         
Query: 182   ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22372 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 22313

                                                           
Query: 242   tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
             ||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 22312 tagtcgatggacaacaggtgaatattcctgtactacctcttgttgg 22267

---

>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome
          Length = 152218

 Score =  424 bits (214), Expect = e-116
 Identities = 268/286 (93%)
 Strand = Plus / Minus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
              ||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||
Sbjct: 130714 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaaagaatcggtagg 130655

                                                                          
Query: 62     ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
              |||||||||||||||||||||||| | |||||  ||| | | | ||||||||||||||||
Sbjct: 130654 ggagcgttccgccttagagggaaggacccgcgcgagcagtgctggacgaagcggaagcga 130595

                                                                          
Query: 122    gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
              |||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||| 
Sbjct: 130594 gaatgtcggcttgagtaacgcaaacgttggtgagaatccaatgcctcgaaaacccaaggg 130535

                                                                          
Query: 182    ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 130534 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaagggcg 130475

                                                            
Query: 242    tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              ||||||||||||||||||| |||||||||||||||||| |||||||
Sbjct: 130474 tagtcgatggacaacaggtgaatattcctgtactaccctttgttgg 130429



 Score =  424 bits (214), Expect = e-116
 Identities = 268/286 (93%)
 Strand = Plus / Plus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
              ||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||
Sbjct: 104680 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaaagaatcggtagg 104739

                                                                          
Query: 62     ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
              |||||||||||||||||||||||| | |||||  ||| | | | ||||||||||||||||
Sbjct: 104740 ggagcgttccgccttagagggaaggacccgcgcgagcagtgctggacgaagcggaagcga 104799

                                                                          
Query: 122    gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
              |||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||| 
Sbjct: 104800 gaatgtcggcttgagtaacgcaaacgttggtgagaatccaatgcctcgaaaacccaaggg 104859

                                                                          
Query: 182    ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 104860 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaagggcg 104919

                                                            
Query: 242    tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              ||||||||||||||||||| |||||||||||||||||| |||||||
Sbjct: 104920 tagtcgatggacaacaggtgaatattcctgtactaccctttgttgg 104965

---

>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon
          Length = 7920

 Score =  424 bits (214), Expect = e-116
 Identities = 268/286 (93%)
 Strand = Plus / Plus

                                                                        
Query: 2    gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
            ||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||
Sbjct: 5645 gaagatgaacggggctaagcgatttgccgaagctgtgggatgtaaaaatgaatcggtagg 5704

                                                                        
Query: 62   ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
            ||||||||||||||||||  |||| | |||||  ||| ||| | ||||||||||||||||
Sbjct: 5705 ggagcgttccgccttagaaagaagtacccgcgcgagcagggttggacgaagcggaagcga 5764

                                                                        
Query: 122  gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
            |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| 
Sbjct: 5765 gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacctaagga 5824

                                                                        
Query: 182  ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
            ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||
Sbjct: 5825 ttcctccgcaaggttcgtccacggagggtaagtcaggacctaagatcaggccgaaaggcg 5884

                                                          
Query: 242  tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
            ||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 5885 tagtcgatggacaacaggttaatattcctgtactgccccttgttgg 5930

---

>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA
          Length = 7920

 Score =  424 bits (214), Expect = e-116
 Identities = 268/286 (93%)
 Strand = Plus / Plus

                                                                        
Query: 2    gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
            ||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||
Sbjct: 5645 gaagatgaacggggctaagcgatttgccgaagctgtgggatgtaaaaatgaatcggtagg 5704

                                                                        
Query: 62   ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
            ||||||||||||||||||  |||| | |||||  ||| ||| | ||||||||||||||||
Sbjct: 5705 ggagcgttccgccttagaaagaagtacccgcgcgagcagggttggacgaagcggaagcga 5764

                                                                        
Query: 122  gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
            |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| 
Sbjct: 5765 gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacctaagga 5824

                                                                        
Query: 182  ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
            ||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||
Sbjct: 5825 ttcctccgcaaggttcgtccacggagggtaagtcaggacctaagatcaggccgaaaggcg 5884

                                                          
Query: 242  tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
            ||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 5885 tagtcgatggacaacaggttaatattcctgtactgccccttgttgg 5930

---

>gb|AF525938.2| Casuarina equisetifolia 23S ribosomal RNA and 4.5S ribosomal RNA
            genes, complete sequence; chloroplast
          Length = 3069

 Score =  418 bits (211), Expect = e-114
 Identities = 269/287 (93%), Gaps = 1/287 (0%)
 Strand = Plus / Plus

                                                                        
Query: 2    gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
            ||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||||
Sbjct: 1169 gaagatgaacggggctaagtgatctgccgaagctgtgggatgtaaaaaggcatcggtagg 1228

                                                                        
Query: 62   ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
            ||||||||||| ||||| |||||||| | |||  ||| | ||| ||||||||||||||||
Sbjct: 1229 ggagcgttccgtcttagggggaagcacctgcgcgagcagtggtagacgaagcggaagcga 1288

                                                                        
Query: 122  gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
            |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 1289 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 1348

                                                                        
Query: 182  ttcctccgcaaggttcgtccacgg-agggtgagtcagggcctaagatcaggccgaaaggc 240
            |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1349 ttcctccgcaaggttcgtccacggtagggtgagtcagggcctaagatcaggccgaaaggc 1408

                                                           
Query: 241  gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
            |||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 1409 gtagtcgatggacaacaggtgaatattcctgtactgccccttgttgg 1455

---

>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial
            sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc))
            genes, complete sequence; large subunit ribosomal RNA
            (rrl) and 5S ribosomal RNA (rrf) genes, complete
            sequence; and tRNA-Arg (trnR(acg)) gene, partial
            sequence; chloroplast genes for chloroplast products
          Length = 8235

 Score =  418 bits (211), Expect = e-114
 Identities = 259/275 (94%)
 Strand = Plus / Plus

                                                                        
Query: 2    gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
            ||||||||| ||| ||||||| |||||||||||||||||||||| |||| ||||||||||
Sbjct: 5050 gaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaatacatcggtagg 5109

                                                                        
Query: 62   ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
            |||||||||||||||||||||||||| | |||  ||| || || ||||||||||||||||
Sbjct: 5110 ggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacgaagcggaagcga 5169

                                                                        
Query: 122  gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
            |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 5170 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 5229

                                                                        
Query: 182  ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5230 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 5289

                                               
Query: 242  tagtcgatggacaacaggtcaatattcctgtacta 276
            ||||||||||||||||||| |||||||||||||||
Sbjct: 5290 tagtcgatggacaacaggtgaatattcctgtacta 5324

---

>gb|AF393612.1| Sphagnum rubellum large subunit ribosomal RNA (rrl) gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 3033

 Score =  418 bits (211), Expect = e-114
 Identities = 262/279 (93%)
 Strand = Plus / Plus

                                                                        
Query: 2    gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
            ||||||||||||| ||||||| ||||||||||||||||||||||||||  ||||||||||
Sbjct: 1157 gaagatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatcggtagg 1216

                                                                        
Query: 62   ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
            ||||||||||||||||| |||||||| | |||  ||| || || ||||||||||||||||
Sbjct: 1217 ggagcgttccgccttagggggaagcaccagcgcgagcaggtgtggacgaagcggaagcga 1276

                                                                        
Query: 122  gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
            |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 1277 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 1336

                                                                        
Query: 182  ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1337 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 1396

                                                   
Query: 242  tagtcgatggacaacaggtcaatattcctgtactacccc 280
            ||||||||||||||||||| ||||||||||||| |||||
Sbjct: 1397 tagtcgatggacaacaggtgaatattcctgtaccacccc 1435

---

>dbj|AB087478.1| Anthoceros formosae chloroplast 23S rRNA, complete sequence
          Length = 2819

 Score =  418 bits (211), Expect = e-114
 Identities = 259/275 (94%)
 Strand = Plus / Plus

                                                                        
Query: 2    gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
            ||||||||| ||| ||||||| |||||||||||||||||||||| |||| ||||||||||
Sbjct: 1160 gaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaatacatcggtagg 1219

                                                                        
Query: 62   ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
            |||||||||||||||||||||||||| | |||  ||| || || ||||||||||||||||
Sbjct: 1220 ggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacgaagcggaagcga 1279

                                                                        
Query: 122  gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
            |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 1280 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 1339

                                                                        
Query: 182  ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1340 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 1399

                                               
Query: 242  tagtcgatggacaacaggtcaatattcctgtacta 276
            ||||||||||||||||||| |||||||||||||||
Sbjct: 1400 tagtcgatggacaacaggtgaatattcctgtacta 1434

---

>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome
          Length = 161162

 Score =  418 bits (211), Expect = e-114
 Identities = 259/275 (94%)
 Strand = Plus / Minus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
              ||||||||| ||| ||||||| |||||||||||||||||||||| |||| ||||||||||
Sbjct: 150085 gaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaatacatcggtagg 150026

                                                                          
Query: 62     ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
              |||||||||||||||||||||||||| | |||  ||| || || ||||||||||||||||
Sbjct: 150025 ggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacgaagcggaagcga 149966

                                                                          
Query: 122    gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
              |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 149965 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 149906

                                                                          
Query: 182    ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149905 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 149846

                                                 
Query: 242    tagtcgatggacaacaggtcaatattcctgtacta 276
              ||||||||||||||||||| |||||||||||||||
Sbjct: 149845 tagtcgatggacaacaggtgaatattcctgtacta 149811



 Score =  418 bits (211), Expect = e-114
 Identities = 259/275 (94%)
 Strand = Plus / Plus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
              ||||||||| ||| ||||||| |||||||||||||||||||||| |||| ||||||||||
Sbjct: 118581 gaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaatacatcggtagg 118640

                                                                          
Query: 62     ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
              |||||||||||||||||||||||||| | |||  ||| || || ||||||||||||||||
Sbjct: 118641 ggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacgaagcggaagcga 118700

                                                                          
Query: 122    gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
              |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 118701 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 118760

                                                                          
Query: 182    ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118761 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 118820

                                                 
Query: 242    tagtcgatggacaacaggtcaatattcctgtacta 276
              ||||||||||||||||||| |||||||||||||||
Sbjct: 118821 tagtcgatggacaacaggtgaatattcctgtacta 118855

---

>dbj|AB073981.1| Anthoceros formosae chloroplast gene for 23S ribosomal RNA, complete
            sequence
          Length = 3503

 Score =  418 bits (211), Expect = e-114
 Identities = 259/275 (94%)
 Strand = Plus / Plus

                                                                        
Query: 2    gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
            ||||||||| ||| ||||||| |||||||||||||||||||||| |||| ||||||||||
Sbjct: 1160 gaagatgaatgggactaagcggtctgccgaagctgtgggatgtcgaaatacatcggtagg 1219

                                                                        
Query: 62   ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
            |||||||||||||||||||||||||| | |||  ||| || || ||||||||||||||||
Sbjct: 1220 ggagcgttccgccttagagggaagcaccagcgtgagcaggtgtggacgaagcggaagcga 1279

                                                                        
Query: 122  gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
            |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 1280 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 1339

                                                                        
Query: 182  ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1340 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 1399

                                               
Query: 242  tagtcgatggacaacaggtcaatattcctgtacta 276
            ||||||||||||||||||| |||||||||||||||
Sbjct: 1400 tagtcgatggacaacaggtgaatattcctgtacta 1434

---

>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome
          Length = 160928

 Score =  416 bits (210), Expect = e-113
 Identities = 274/295 (92%), Gaps = 9/295 (3%)
 Strand = Plus / Minus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa-------tgcat 54
              ||||||||||||||||||||||||||||||||||||||||||| ||||       |||||
Sbjct: 139214 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaagtaaaaatgcat 139155

                                                                          
Query: 55     cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc--gacgaag 112
              ||||||||||||||||||||||||||||||||| |||||  ||| || ||   |||||||
Sbjct: 139154 cggtaggggagcgttccgccttagagggaagcacccgcgcgagcaggcgtgtggacgaag 139095

                                                                          
Query: 113    cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 172
              ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 139094 cggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaa 139035

                                                                          
Query: 173    acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 232
              ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139034 acctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 138975

                                                                     
Query: 233    cgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 138974 cgaaaggcgtagtcgatgggcaacaggtgaatattcctgtactaccccttgttgg 138920



 Score =  416 bits (210), Expect = e-113
 Identities = 274/295 (92%), Gaps = 9/295 (3%)
 Strand = Plus / Plus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaa-------tgcat 54
              ||||||||||||||||||||||||||||||||||||||||||| ||||       |||||
Sbjct: 110846 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaagtaaaaatgcat 110905

                                                                          
Query: 55     cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtc--gacgaag 112
              ||||||||||||||||||||||||||||||||| |||||  ||| || ||   |||||||
Sbjct: 110906 cggtaggggagcgttccgccttagagggaagcacccgcgcgagcaggcgtgtggacgaag 110965

                                                                          
Query: 113    cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 172
              ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 110966 cggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaa 111025

                                                                          
Query: 173    acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 232
              ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111026 acctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 111085

                                                                     
Query: 233    cgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              ||||||||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 111086 cgaaaggcgtagtcgatgggcaacaggtgaatattcctgtactaccccttgttgg 111140

---

>gb|AF393606.1| Pellia neesiana large subunit ribosomal RNA (rrl) gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 2989

 Score =  416 bits (210), Expect = e-113
 Identities = 264/282 (93%)
 Strand = Plus / Plus

                                                                        
Query: 2    gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
            ||||||||| ||| ||||||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 1161 gaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaaaatacatcggtagg 1220

                                                                        
Query: 62   ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
            ||||||||||||||||| | |||||| | |||  ||| || || ||||||||||||||||
Sbjct: 1221 ggagcgttccgccttagggagaagcaccagcgtgagcaggtgtggacgaagcggaagcga 1280

                                                                        
Query: 122  gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
            |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 1281 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 1340

                                                                        
Query: 182  ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1341 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 1400

                                                      
Query: 242  tagtcgatggacaacaggtcaatattcctgtactaccccttg 283
            ||||||||||||||||||  ||||||||||||||||||||||
Sbjct: 1401 tagtcgatggacaacaggcgaatattcctgtactaccccttg 1442

---

>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA
          Length = 121024

 Score =  408 bits (206), Expect = e-111
 Identities = 267/286 (93%), Gaps = 1/286 (0%)
 Strand = Plus / Minus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
              ||||||||| ||| ||||||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 115054 gaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaaaatacatcggtagg 114995

                                                                          
Query: 62     ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
              ||||||||||||||||| | |||||| |  ||  ||| || || ||||||||||||||||
Sbjct: 114994 ggagcgttccgccttagggagaagcatca-cgtgagcaggtgtggacgaagcggaagcga 114936

                                                                          
Query: 122    gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
              |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 114935 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 114876

                                                                          
Query: 182    ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114875 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 114816

                                                            
Query: 242    tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              ||||||||||||||||||  ||||||||||||||||||||||||||
Sbjct: 114815 tagtcgatggacaacaggcaaatattcctgtactaccccttgttgg 114770



 Score =  408 bits (206), Expect = e-111
 Identities = 267/286 (93%), Gaps = 1/286 (0%)
 Strand = Plus / Plus

                                                                         
Query: 2     gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
             ||||||||| ||| ||||||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 87066 gaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaaaatacatcggtagg 87125

                                                                         
Query: 62    ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
             ||||||||||||||||| | |||||| |  ||  ||| || || ||||||||||||||||
Sbjct: 87126 ggagcgttccgccttagggagaagcatca-cgtgagcaggtgtggacgaagcggaagcga 87184

                                                                         
Query: 122   gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
             |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 87185 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 87244

                                                                         
Query: 182   ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87245 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 87304

                                                           
Query: 242   tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
             ||||||||||||||||||  ||||||||||||||||||||||||||
Sbjct: 87305 tagtcgatggacaacaggcaaatattcctgtactaccccttgttgg 87350

---

>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome
          Length = 154373

 Score =  408 bits (206), Expect = e-111
 Identities = 263/282 (93%)
 Strand = Plus / Minus

                                                                          
Query: 6      atgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggag 65
              ||||||||| ||||||| ||||||||||||||||||||||||||  ||||||||||||||
Sbjct: 145393 atgaacgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatcggtaggggag 145334

                                                                          
Query: 66     cgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaat 125
              |||||||||||||||||||||| | |||  ||| || || ||| ||||||||||||||||
Sbjct: 145333 cgttccgccttagagggaagcaccagcgcgagcaggtgtggacaaagcggaagcgagaat 145274

                                                                          
Query: 126    gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcc 185
              |||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 145273 gtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcc 145214

                                                                          
Query: 186    tccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagt 245
              |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 145213 tccgcaaggttcgtccacggagggtgagtcagggcctaaggtaaggccgaaaggcgtagt 145154

                                                        
Query: 246    cgatggacaacaggtcaatattcctgtactaccccttgttgg 287
               |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 145153 tgatggacaacaggtgaatattcctgtactaccccttgttgg 145112



 Score =  408 bits (206), Expect = e-111
 Identities = 263/282 (93%)
 Strand = Plus / Plus

                                                                          
Query: 6      atgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggag 65
              ||||||||| ||||||| ||||||||||||||||||||||||||  ||||||||||||||
Sbjct: 113069 atgaacgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatcggtaggggag 113128

                                                                          
Query: 66     cgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaat 125
              |||||||||||||||||||||| | |||  ||| || || ||| ||||||||||||||||
Sbjct: 113129 cgttccgccttagagggaagcaccagcgcgagcaggtgtggacaaagcggaagcgagaat 113188

                                                                          
Query: 126    gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcc 185
              |||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 113189 gtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcc 113248

                                                                          
Query: 186    tccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagt 245
              |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 113249 tccgcaaggttcgtccacggagggtgagtcagggcctaaggtaaggccgaaaggcgtagt 113308

                                                        
Query: 246    cgatggacaacaggtcaatattcctgtactaccccttgttgg 287
               |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 113309 tgatggacaacaggtgaatattcctgtactaccccttgttgg 113350

---

>gb|AF393577.1| Bazzania trilobata large subunit ribosomal RNA (rrl) gene, partial
            sequence; chloroplast gene for chloroplast product
          Length = 2945

 Score =  408 bits (206), Expect = e-111
 Identities = 266/286 (93%)
 Strand = Plus / Plus

                                                                        
Query: 2    gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
            ||||||||| ||| ||||||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 1141 gaagatgaatgggactaagcggtctgccgaagctgtgggatgtcaaaatacatcggtagg 1200

                                                                        
Query: 62   ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
            ||||||||||||||||||| |||||  | |||  ||| || || ||||||||||||||||
Sbjct: 1201 ggagcgttccgccttagagagaagcgccagcgtgagcaggtgtggacgaagcggaagcga 1260

                                                                        
Query: 122  gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
            |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 1261 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 1320

                                                                        
Query: 182  ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
            |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1321 ttcctctgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccaaaaggcg 1380

                                                          
Query: 242  tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
            ||||||||||||||||||  ||||||||||||||||||||||||||
Sbjct: 1381 tagtcgatggacaacaggcgaatattcctgtactaccccttgttgg 1426

---

>gb|AF322910.1|AF322910 Vigna radiata 23S ribosomal RNA, partial sequence; chloroplast gene
           for chloroplast product
          Length = 1041

 Score =  402 bits (203), Expect = e-109
 Identities = 267/286 (93%), Gaps = 3/286 (1%)
 Strand = Plus / Plus

                                                                       
Query: 2   gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 425 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgaatcggtagg 484

                                                                       
Query: 62  ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
           ||| ||||||||||||| |||||| | |||||  ||| | | | ||||||||||||||||
Sbjct: 485 gga-cgttccgccttagggggaaggacccgcgcgagcagtgctggacgaagcggaagcga 543

                                                                       
Query: 122 gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
           |||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||| 
Sbjct: 544 gaatgtcggcttgagtaacgcaaacgttggtgagaatccaatgcctcgaaaacccaaggg 603

                                                                       
Query: 182 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||
Sbjct: 604 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaa--cg 661

                                                         
Query: 242 tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
           ||||||||||||||||||| |||||||||||||||||| |||||||
Sbjct: 662 tagtcgatggacaacaggtgaatattcctgtactaccctttgttgg 707

---

>gb|AF254866.1|AF254866 Amaranthus tricolor 23S ribosomal RNA, complete sequence; chloroplast
            gene for chloroplast product
          Length = 3322

 Score =  402 bits (203), Expect = e-109
 Identities = 263/283 (92%)
 Strand = Plus / Plus

                                                                        
Query: 2    gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
            ||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||
Sbjct: 1649 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaaaacatcggtagg 1708

                                                                        
Query: 62   ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
            |||||||||||  |||| |||||||| | |||  |||   |   ||||||||||||||||
Sbjct: 1709 ggagcgttccgtgttagggggaagcatcggcgcgagccatgccagacgaagcggaagcga 1768

                                                                        
Query: 122  gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
            |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 1769 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 1828

                                                                        
Query: 182  ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1829 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 1888

                                                       
Query: 242  tagtcgatggacaacaggtcaatattcctgtactaccccttgt 284
            ||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1889 tagtcgatggacaacaggtgaatattcctgtactaccccttgt 1931

---

>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome
          Length = 70028

 Score =  396 bits (200), Expect = e-107
 Identities = 257/276 (93%)
 Strand = Plus / Minus

                                                                         
Query: 6     atgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggag 65
             |||||||||||||||||||  |||||||||||||||||| ||||  ||||||||||||||
Sbjct: 51527 atgaacggggctaagcgattcgccgaagctgtgggatgtaaaaagacatcggtaggggag 51468

                                                                         
Query: 66    cgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaat 125
             |||||||||||||||||||||  | ||   ||| | ||| ||||||||||||||||||||
Sbjct: 51467 cgttccgccttagagggaagcctctgcacgagcagcggtggacgaagcggaagcgagaat 51408

                                                                         
Query: 126   gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcc 185
             |||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 51407 gtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcc 51348

                                                                         
Query: 186   tccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagt 245
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51347 tccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagt 51288

                                                 
Query: 246   cgatggacaacaggtcaatattcctgtactacccct 281
             | ||||||||||||| ||||||||||||||||||||
Sbjct: 51287 caatggacaacaggtgaatattcctgtactacccct 51252



 Score =  396 bits (200), Expect = e-107
 Identities = 257/276 (93%)
 Strand = Plus / Plus

                                                                         
Query: 6     atgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggag 65
             |||||||||||||||||||  |||||||||||||||||| ||||  ||||||||||||||
Sbjct: 38301 atgaacggggctaagcgattcgccgaagctgtgggatgtaaaaagacatcggtaggggag 38360

                                                                         
Query: 66    cgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaat 125
             |||||||||||||||||||||  | ||   ||| | ||| ||||||||||||||||||||
Sbjct: 38361 cgttccgccttagagggaagcctctgcacgagcagcggtggacgaagcggaagcgagaat 38420

                                                                         
Query: 126   gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcc 185
             |||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 38421 gtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcc 38480

                                                                         
Query: 186   tccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagt 245
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38481 tccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagt 38540

                                                 
Query: 246   cgatggacaacaggtcaatattcctgtactacccct 281
             | ||||||||||||| ||||||||||||||||||||
Sbjct: 38541 caatggacaacaggtgaatattcctgtactacccct 38576

---

>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes
          Length = 7395

 Score =  396 bits (200), Expect = e-107
 Identities = 257/276 (93%)
 Strand = Plus / Plus

                                                                        
Query: 6    atgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggag 65
            |||||||||||||||||||  |||||||||||||||||| ||||  ||||||||||||||
Sbjct: 5229 atgaacggggctaagcgattcgccgaagctgtgggatgtaaaaagacatcggtaggggag 5288

                                                                        
Query: 66   cgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaat 125
            |||||||||||||||||||||  | ||   ||| | ||| ||||||||||||||||||||
Sbjct: 5289 cgttccgccttagagggaagcctctgcacgagcagcggtggacgaagcggaagcgagaat 5348

                                                                        
Query: 126  gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcc 185
            |||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 5349 gtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcc 5408

                                                                        
Query: 186  tccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagt 245
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5409 tccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagt 5468

                                                
Query: 246  cgatggacaacaggtcaatattcctgtactacccct 281
            | ||||||||||||| ||||||||||||||||||||
Sbjct: 5469 caatggacaacaggtgaatattcctgtactacccct 5504

---

>gb|AY178864.1| Adiantum capillus-veneris chloroplast, complete genome
          Length = 150568

 Score =  369 bits (186), Expect = 3e-99
 Identities = 261/286 (91%)
 Strand = Plus / Plus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
              |||||||| |||| ||||||| ||||||||||||||||||||||||||  ||||||||||
Sbjct: 145085 gaagatgagcgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatcggtagg 145144

                                                                          
Query: 62     ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
              |||||||||||||  ||| ||||||| | | |  ||| || || ||||||||||||||||
Sbjct: 145145 ggagcgttccgccccagatggaagcaccagtgcgagcaggtgtggacgaagcggaagcga 145204

                                                                          
Query: 122    gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
              |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| 
Sbjct: 145205 gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacctaaggg 145264

                                                                          
Query: 182    ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
              ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||
Sbjct: 145265 ttcctccgcaaggttcgtccacggagggtgagtcaggtcctaagatcaggccgagaggcg 145324

                                                            
Query: 242    tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              |||| |||||||||| ||| |||||||| ||||| |||||||||||
Sbjct: 145325 tagttgatggacaacgggttaatattcccgtactgccccttgttgg 145370



 Score =  369 bits (186), Expect = 3e-99
 Identities = 261/286 (91%)
 Strand = Plus / Minus

                                                                         
Query: 2     gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
             |||||||| |||| ||||||| ||||||||||||||||||||||||||  ||||||||||
Sbjct: 87766 gaagatgagcgggactaagcggtctgccgaagctgtgggatgtcaaaaaacatcggtagg 87707

                                                                         
Query: 62    ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
             |||||||||||||  ||| ||||||| | | |  ||| || || ||||||||||||||||
Sbjct: 87706 ggagcgttccgccccagatggaagcaccagtgcgagcaggtgtggacgaagcggaagcga 87647

                                                                         
Query: 122   gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
             |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| 
Sbjct: 87646 gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacctaaggg 87587

                                                                         
Query: 182   ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
             ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||
Sbjct: 87586 ttcctccgcaaggttcgtccacggagggtgagtcaggtcctaagatcaggccgagaggcg 87527

                                                           
Query: 242   tagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
             |||| |||||||||| ||| |||||||| ||||| |||||||||||
Sbjct: 87526 tagttgatggacaacgggttaatattcccgtactgccccttgttgg 87481

---

>dbj|AP004638.1| Psilotum nudum chloroplast DNA, complete genome
          Length = 138829

 Score =  361 bits (182), Expect = 8e-97
 Identities = 257/282 (91%)
 Strand = Plus / Minus

                                                                          
Query: 6      atgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggag 65
              ||||||||| ||||| | ||||||||||||||| |||||||||   ||||||||||||||
Sbjct: 127281 atgaacgggactaagtggtctgccgaagctgtgagatgtcaaaggacatcggtaggggag 127222

                                                                          
Query: 66     cgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaat 125
              |||||||  | |||  ||||||   |||  ||| || || ||||||||||||||||||||
Sbjct: 127221 cgttccgtatcagaaagaagcactagcgtgagcaggtgtggacgaagcggaagcgagaat 127162

                                                                          
Query: 126    gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcc 185
              |||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 127161 gtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcc 127102

                                                                          
Query: 186    tccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagt 245
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127101 tccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagt 127042

                                                        
Query: 246    cgatggacaacaggtcaatattcctgtactaccccttgttgg 287
              ||||||||||||||| |||||||||||||||| |||||||||
Sbjct: 127041 cgatggacaacaggtgaatattcctgtactactccttgttgg 127000



 Score =  361 bits (182), Expect = 8e-97
 Identities = 257/282 (91%)
 Strand = Plus / Plus

                                                                         
Query: 6     atgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggag 65
             ||||||||| ||||| | ||||||||||||||| |||||||||   ||||||||||||||
Sbjct: 96166 atgaacgggactaagtggtctgccgaagctgtgagatgtcaaaggacatcggtaggggag 96225

                                                                         
Query: 66    cgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaat 125
             |||||||  | |||  ||||||   |||  ||| || || ||||||||||||||||||||
Sbjct: 96226 cgttccgtatcagaaagaagcactagcgtgagcaggtgtggacgaagcggaagcgagaat 96285

                                                                         
Query: 126   gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcc 185
             |||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 96286 gtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcc 96345

                                                                         
Query: 186   tccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagt 245
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96346 tccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagt 96405

                                                       
Query: 246   cgatggacaacaggtcaatattcctgtactaccccttgttgg 287
             ||||||||||||||| |||||||||||||||| |||||||||
Sbjct: 96406 cgatggacaacaggtgaatattcctgtactactccttgttgg 96447

---

>emb|X59768.1|CA23SRR C.americana 23S rRNA gene
          Length = 2902

 Score =  351 bits (177), Expect = 8e-94
 Identities = 264/292 (90%), Gaps = 7/292 (2%)
 Strand = Plus / Plus

                                                                        
Query: 2    gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg------catc 55
            |||||| ||||||||||||||||| |||||||||||||||||| |||||       ||||
Sbjct: 1153 gaagattaacggggctaagcgatccgccgaagctgtgggatgtaaaaataaaaatacatc 1212

                                                                        
Query: 56   ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 115
            |||||||||||||||||||||||||||||||  | ||   ||| | ||| |||||| |||
Sbjct: 1213 ggtaggggagcgttccgccttagagggaagcctctgcacgagcagcggtggacgaaacgg 1272

                                                                        
Query: 116  aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 175
            |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1273 aagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacc 1332

                                                                        
Query: 176  caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccga 235
             |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1333 taagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccga 1392

                                                                
Query: 236  aaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
            || | ||||||||||| |||||||| |||||| |||||||||||||||||||
Sbjct: 1393 aacg-gtagtcgatgggcaacaggtgaatatttctgtactaccccttgttgg 1443

---

>gb|AF393586.1| Chara sp. CL-2002-2 small subunit ribosomal RNA (rrs) gene, partial
            sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc))
            genes, complete sequence; large subunit ribosomal RNA
            (rrl) and 5S ribosomal RNA (rrf) genes, complete
            sequence; and tRNA-Arg (trnR(acg)) gene, partial
            sequence; chloroplast genes for chloroplast products
          Length = 7651

 Score =  351 bits (177), Expect = 8e-94
 Identities = 255/281 (90%)
 Strand = Plus / Plus

                                                                        
Query: 2    gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
            ||||||||||||| ||||||| ||||||||||||||||||||| |||   ||||||||||
Sbjct: 5189 gaagatgaacgggactaagcggtctgccgaagctgtgggatgtaaaataacatcggtagg 5248

                                                                        
Query: 62   ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
            ||||||||||||  ||| | |||||| | | | || | || || ||||||||||||||||
Sbjct: 5249 ggagcgttccgctctagggagaagcatcagtgtaaacaggtgtggacgaagcggaagcga 5308

                                                                        
Query: 122  gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
            |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 5309 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 5368

                                                                        
Query: 182  ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
            |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 5369 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagattaggccgaaaggcg 5428

                                                     
Query: 242  tagtcgatggacaacaggtcaatattcctgtactacccctt 282
             |||||||||||||||||  ||||||||||||| |||||||
Sbjct: 5429 cagtcgatggacaacaggcgaatattcctgtaccacccctt 5469

---

>gb|AF393584.1| Chara sp. CL-2002-1 large subunit ribosomal RNA (rrl) gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 3257

 Score =  351 bits (177), Expect = 8e-94
 Identities = 255/281 (90%)
 Strand = Plus / Plus

                                                                        
Query: 2    gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
            ||||||||||||| ||||||| ||||||||||||||||||||| |||   ||||||||||
Sbjct: 1156 gaagatgaacgggactaagcggtctgccgaagctgtgggatgtaaaataacatcggtagg 1215

                                                                        
Query: 62   ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
            ||||||||||||  ||| | |||||| | | | || | || || ||||||||||||||||
Sbjct: 1216 ggagcgttccgctctagggagaagcatcagtgtaaacaggtgtggacgaagcggaagcga 1275

                                                                        
Query: 122  gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
            |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 1276 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 1335

                                                                        
Query: 182  ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
            |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1336 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagattaggccgaaaggcg 1395

                                                     
Query: 242  tagtcgatggacaacaggtcaatattcctgtactacccctt 282
             |||||||||||||||||  ||||||||||||| |||||||
Sbjct: 1396 cagtcgatggacaacaggcgaatattcctgtaccacccctt 1436

---

>gb|AF393579.1| Chara corallina large subunit ribosomal RNA (rrl) gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 3277

 Score =  351 bits (177), Expect = 8e-94
 Identities = 255/281 (90%)
 Strand = Plus / Plus

                                                                        
Query: 2    gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
            ||||||||||||| ||||||| ||||||||||||||||||||| |||   ||||||||||
Sbjct: 1156 gaagatgaacgggactaagcggtctgccgaagctgtgggatgtaaaataacatcggtagg 1215

                                                                        
Query: 62   ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
            ||||||||||||  ||| | |||||| | | | || | || || ||||||||||||||||
Sbjct: 1216 ggagcgttccgctctagggagaagcatcagtgtaaacaggtgtggacgaagcggaagcga 1275

                                                                        
Query: 122  gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
            |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 1276 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 1335

                                                                        
Query: 182  ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
            |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1336 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagattaggccgaaaggcg 1395

                                                     
Query: 242  tagtcgatggacaacaggtcaatattcctgtactacccctt 282
             |||||||||||||||||  ||||||||||||| |||||||
Sbjct: 1396 cagtcgatggacaacaggcgaatattcctgtaccacccctt 1436

---

>dbj|AB197035.2| Selaginella uncinata chloroplast DNA, complete genome
          Length = 144170

 Score =  347 bits (175), Expect = 1e-92
 Identities = 255/280 (91%), Gaps = 5/280 (1%)
 Strand = Plus / Minus

                                                                          
Query: 5      gatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa--atgcatcggtaggg 62
              |||||||||| ||||||| |||||||||||||||||||||| ||  || |||||||||||
Sbjct: 138107 gatgaacgggactaagcggtctgccgaagctgtgggatgtcgaacaatacatcggtaggg 138048

                                                                          
Query: 63     gagcgttccgccttagagg---gaagcaaccgcgaaagcgggggtcgacgaagcggaagc 119
              |||||||||||||  ||||   |||||| | |||  ||| || |  ||||||||||||||
Sbjct: 138047 gagcgttccgcctcggaggagggaagcaccagcgcgagcaggtgcggacgaagcggaagc 137988

                                                                          
Query: 120    gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 179
              |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 137987 gagagtgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaag 137928

                                                                          
Query: 180    gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 239
              | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 137927 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgagagg 137868

                                                      
Query: 240    cgtagtcgatggacaacaggtcaatattcctgtactaccc 279
              ||||||||||||||||||||  ||||||||||||||||||
Sbjct: 137867 cgtagtcgatggacaacaggcgaatattcctgtactaccc 137828



 Score =  347 bits (175), Expect = 1e-92
 Identities = 255/280 (91%), Gaps = 5/280 (1%)
 Strand = Plus / Plus

                                                                         
Query: 5     gatgaacggggctaagcgatctgccgaagctgtgggatgtcaaa--atgcatcggtaggg 62
             |||||||||| ||||||| |||||||||||||||||||||| ||  || |||||||||||
Sbjct: 83770 gatgaacgggactaagcggtctgccgaagctgtgggatgtcgaacaatacatcggtaggg 83829

                                                                         
Query: 63    gagcgttccgccttagagg---gaagcaaccgcgaaagcgggggtcgacgaagcggaagc 119
             |||||||||||||  ||||   |||||| | |||  ||| || |  ||||||||||||||
Sbjct: 83830 gagcgttccgcctcggaggagggaagcaccagcgcgagcaggtgcggacgaagcggaagc 83889

                                                                         
Query: 120   gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 179
             |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 83890 gagagtgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaag 83949

                                                                         
Query: 180   gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 239
             | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 83950 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgagagg 84009

                                                     
Query: 240   cgtagtcgatggacaacaggtcaatattcctgtactaccc 279
             ||||||||||||||||||||  ||||||||||||||||||
Sbjct: 84010 cgtagtcgatggacaacaggcgaatattcctgtactaccc 84049

---

>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score =  345 bits (174), Expect = 5e-92
 Identities = 177/178 (99%)
 Strand = Plus / Minus

                                                                           
Query: 110     aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 169
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5634548 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 5634489

                                                                           
Query: 170     aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 229
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5634488 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 5634429

                                                                         
Query: 230     ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
               || |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5634428 ggtcgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 5634371

---

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  345 bits (174), Expect = 5e-92
 Identities = 177/178 (99%)
 Strand = Plus / Minus

                                                                           
Query: 110     aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 169
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5634537 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 5634478

                                                                           
Query: 170     aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 229
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5634477 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 5634418

                                                                         
Query: 230     ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
               || |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5634417 ggtcgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 5634360

---

>emb|BX000560.1|CNS08CE6 Oryza sativa chromosome 12, . BAC OSJNBa0021D06 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 139684

 Score =  345 bits (174), Expect = 5e-92
 Identities = 177/178 (99%)
 Strand = Plus / Plus

                                                                         
Query: 110   aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 169
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18337 aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 18396

                                                                         
Query: 170   aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 229
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18397 aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 18456

                                                                       
Query: 230   ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
             || |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 18457 ggtcgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 18514

---

>gb|AF393582.1| Chaetosphaeridium globosum SAG 26.98 large subunit ribosomal RNA
            (rrl) gene, complete sequence; chloroplast gene for
            chloroplast product
          Length = 2875

 Score =  341 bits (172), Expect = 7e-91
 Identities = 250/275 (90%), Gaps = 2/275 (0%)
 Strand = Plus / Plus

                                                                        
Query: 2    gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg--catcggta 59
            ||||||||||||| ||||||| ||||||||||||||||||||||||||    ||||||||
Sbjct: 1140 gaagatgaacgggactaagcggtctgccgaagctgtgggatgtcaaaaaagacatcggta 1199

                                                                        
Query: 60   ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 119
            ||||||||||| ||  ||| | ||||||   |||||||| |  || ||||||||||||| 
Sbjct: 1200 ggggagcgttctgctgtagggagaagcattagcgaaagcagatgtggacgaagcggaagt 1259

                                                                        
Query: 120  gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 179
            |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||
Sbjct: 1260 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 1319

                                                                        
Query: 180  gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 239
            | |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1320 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatgaggccgaaagg 1379

                                               
Query: 240  cgtagtcgatggacaacaggtcaatattcctgtac 274
            || |||||||||||||||||| |||||||||||||
Sbjct: 1380 cgcagtcgatggacaacaggttaatattcctgtac 1414

---

>emb|AJ007508.1|GGN7508 Gnetum gnemon chloroplast psaC, ccsA, 4.5S rRNA, 5S rRNA, 16S rRNA
            (partial), 23S rRNA, and tRNA (Leu, Asn, Arg, Ala and
            Ile) genes
          Length = 9493

 Score =  339 bits (171), Expect = 3e-90
 Identities = 260/287 (90%), Gaps = 2/287 (0%)
 Strand = Plus / Minus

                                                                        
Query: 2    gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
            ||||||||||||| ||||||||||||||||||||||||||| || |||  ||||||||||
Sbjct: 5410 gaagatgaacgggactaagcgatctgccgaagctgtgggatatctaaaaacatcggtagg 5351

                                                                        
Query: 62   ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
            |||||||||||  | |||| |||||| |||||  ||| || || ||||||||||||| ||
Sbjct: 5350 ggagcgttccgtttcagagagaagcacccgcgcgagcaggtgtggacgaagcggaagtga 5291

                                                                        
Query: 122  gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
            |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 5290 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 5231

                                                                        
Query: 182  ttcctccgcaaggttcgtcc-acggagggtgagtcagggcctaagatcaggccgaaaggc 240
            |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| | 
Sbjct: 5230 ttcctccgcaaggttcgtccaacggggggtgagtcagggcctaagatcaggccgaaacg- 5172

                                                           
Query: 241  gtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
            || ||||||||||||||||| ||||||||||||||| || |||||||
Sbjct: 5171 gttgtcgatggacaacaggtgaatattcctgtactatcctttgttgg 5125

---

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  339 bits (171), Expect = 3e-90
 Identities = 171/171 (100%)
 Strand = Plus / Plus

                                                                            
Query: 1        tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33526791 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 33526850

                                                                            
Query: 61       gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33526851 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 33526910

                                                                   
Query: 121      agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 171
                |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33526911 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 33526961



 Score =  141 bits (71), Expect = 1e-30
 Identities = 130/147 (88%), Gaps = 2/147 (1%)
 Strand = Plus / Minus

                                                                           
Query: 56      ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 115
               |||||||||| ||||| |||||||||||||| ||| | ||||  ||| |||| |||||||
Sbjct: 1076778 ggtaggggagtgttccaccttagagggaagccaccacaaaagtaggg-tcgatgaagcgg 1076720

                                                                           
Query: 116     aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 175
               | | ||||||||| ||||||||||| ||||||| ||| ||||||||||||| ||||||||
Sbjct: 1076719 atgtgagaatgtctgcttgagtaac-aaaacatcggtaagaatccaatgcctcgaaaacc 1076661

                                          
Query: 176     caaggtttcctccgcaaggttcgtcca 202
               || ||||||||||||||||||||||||
Sbjct: 1076660 cagggtttcctccgcaaggttcgtcca 1076634



 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 49/50 (98%)
 Strand = Plus / Plus

                                                                
Query: 1      tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaat 50
              ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 527911 tgaagatgaacggggctaagcgatctgccaaagctgtgggatgtcaaaat 527960



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 75/89 (84%), Gaps = 1/89 (1%)
 Strand = Plus / Minus

                                                                           
Query: 52      catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 111
               ||||||| || ||| |||| |||||| | |||||||||||| |||||  |||||||| ||
Sbjct: 1076893 catcggttggtgagtgttctgccttaaaaggaagcaaccgcaaaagc-agggtcgacaaa 1076835

                                            
Query: 112     gcggaagcgagaatgtcggcttgagtaac 140
               | ||||| |||||||| |||| |||||||
Sbjct: 1076834 gtggaagtgagaatgttggctggagtaac 1076806



 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                            
Query: 132      ttgagtaacgaaaacattggtgagaatc 159
                ||||||||||||||||||||||||||||
Sbjct: 33498173 ttgagtaacgaaaacattggtgagaatc 33498146



 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 225      gatcaggccgaaaggcgtag 244
                ||||||||||||||||||||
Sbjct: 41814858 gatcaggccgaaaggcgtag 41814877



 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 1       tgaagatgaacggggctaagcgat 24
               ||||||||||| ||||||||||||
Sbjct: 9371934 tgaagatgaacagggctaagcgat 9371911

---

>dbj|AP003280.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0557A01
          Length = 147201

 Score =  339 bits (171), Expect = 3e-90
 Identities = 171/171 (100%)
 Strand = Plus / Plus

                                                                         
Query: 1     tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71988 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 72047

                                                                         
Query: 61    gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72048 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 72107

                                                                
Query: 121   agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 171
             |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72108 agaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 72158



 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                         
Query: 132   ttgagtaacgaaaacattggtgagaatc 159
             ||||||||||||||||||||||||||||
Sbjct: 43370 ttgagtaacgaaaacattggtgagaatc 43343

---

>emb|AJ318074.1|CSA318074 Cucumis sativus chloroplast ccsA gene, ndhD gene (partial), 4.5S
           rRNA gene, 23S rRNA gene (partial) and 5S rRNA gene
          Length = 6689

 Score =  337 bits (170), Expect = 1e-89
 Identities = 265/292 (90%), Gaps = 11/292 (3%)
 Strand = Plus / Plus

                                                                       
Query: 2   gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
           ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 613 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatacatcggtagg 672

                                                                       
Query: 62  ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
           ||||||||||||||||||| |||||  |||||  ||||| ||| ||||||||||||||||
Sbjct: 673 ggagcgttccgccttagagagaagcctccgcgcgagcggtggtggacgaagcggaagcga 732

                                                                       
Query: 122 gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
           |||||||  | |||||   | ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 733 gaatgtc-acgtgagt---gcaaacattggtgagaatccaatgccccgaaaacctaaggg 788

                                                                       
Query: 182 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaa----ga--tcaggccga 235
           |||||||||||||||||||||||||||||||||||||||||||    ||  ||| |||||
Sbjct: 789 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaaacgtgacgtca-gccga 847

                                                               
Query: 236 aaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgttgg 287
           ||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 848 aaggcgtagtcgatggacaacaggtgaatattcctgtactgccccttgttgg 899

---

>gb|AF393603.1| Nitella sp. CL-2002 large subunit ribosomal RNA (rrl) gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 3349

 Score =  335 bits (169), Expect = 5e-89
 Identities = 253/281 (90%)
 Strand = Plus / Plus

                                                                        
Query: 2    gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
            ||||||||| ||| ||||||| ||||||||||||||||||||  ||||| ||||||||||
Sbjct: 1151 gaagatgaatgggactaagcggtctgccgaagctgtgggatgctaaaatacatcggtagg 1210

                                                                        
Query: 62   ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
            ||||||||||||  ||| | |||||| | | | || | |  || ||||||||||||||||
Sbjct: 1211 ggagcgttccgctctagggagaagcatcagtgtaaacagatgtggacgaagcggaagcga 1270

                                                                        
Query: 122  gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
            |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 1271 gaatgtcggcttgagtaacggaaacattggtgagaatccaatgccccgaaaacctaaggg 1330

                                                                        
Query: 182  ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
            ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||
Sbjct: 1331 ttcctccgcaaggttcgtccacggagggttagtcagggcctaagattaggccgaaaggcg 1390

                                                     
Query: 242  tagtcgatggacaacaggtcaatattcctgtactacccctt 282
             |||||||||||||||||  ||||||||||||| |||||||
Sbjct: 1391 cagtcgatggacaacaggcgaatattcctgtaccacccctt 1431

---

>gb|AY958085.1| Staurastrum punctulatum chloroplast, complete genome
          Length = 157089

 Score =  329 bits (166), Expect = 3e-87
 Identities = 256/285 (89%), Gaps = 2/285 (0%)
 Strand = Plus / Plus

                                                                        
Query: 2    gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaa--aatgcatcggta 59
            ||||||||||||| ||||||| |||||||||||||||||||||| |  |  |||||||||
Sbjct: 1255 gaagatgaacgggactaagcggtctgccgaagctgtgggatgtccattagggcatcggta 1314

                                                                        
Query: 60   ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 119
            ||||||||||||||    | | |||||| | | | || | || || ||||||||||||| 
Sbjct: 1315 ggggagcgttccgcaaacgggagaagcatcagtgtaaacaggtgtggacgaagcggaagt 1374

                                                                        
Query: 120  gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 179
            |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1375 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaag 1434

                                                                        
Query: 180  gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 239
            | ||||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||
Sbjct: 1435 ggttcctccgcaaggctcgtccacggagggtgagtcagggcctaagatcatgccgaacgg 1494

                                                         
Query: 240  cgtagtcgatggacaacaggtcaatattcctgtactaccccttgt 284
            || ||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1495 cgcagtcgatggacaacaggtcaagattcctgtactaccccttgt 1539

---

>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome
          Length = 150725

 Score =  329 bits (166), Expect = 3e-87
 Identities = 178/182 (97%)
 Strand = Plus / Minus

                                                                          
Query: 106    gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 165
              |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 130534 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 130475

                                                                          
Query: 166    cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 225
              |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130474 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 130415

                                                                          
Query: 226    atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgtt 285
              ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 130414 atcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactaccccttgtt 130355

                
Query: 286    gg 287
              ||
Sbjct: 130354 gg 130353



 Score =  329 bits (166), Expect = 3e-87
 Identities = 178/182 (97%)
 Strand = Plus / Plus

                                                                          
Query: 106    gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 165
              |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 102911 gacgaagcggaagcgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 102970

                                                                          
Query: 166    cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 225
              |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102971 cccgaaaacctaagggttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 103030

                                                                          
Query: 226    atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactaccccttgtt 285
              ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 103031 atcaggccgaaaggcgtagtcgatggacaacaggtgaatattcctgtactaccccttgtt 103090

                
Query: 286    gg 287
              ||
Sbjct: 103091 gg 103092



 Score =  109 bits (55), Expect = 5e-21
 Identities = 67/71 (94%)
 Strand = Plus / Minus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
              ||||||||||||||||||||| ||||||||||||||||||||| ||||  ||||||||||
Sbjct: 130638 gaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaaaacatcggtagg 130579

                         
Query: 62     ggagcgttccg 72
              |||||||||||
Sbjct: 130578 ggagcgttccg 130568



 Score =  109 bits (55), Expect = 5e-21
 Identities = 67/71 (94%)
 Strand = Plus / Plus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
              ||||||||||||||||||||| ||||||||||||||||||||| ||||  ||||||||||
Sbjct: 102807 gaagatgaacggggctaagcggtctgccgaagctgtgggatgtaaaaaaacatcggtagg 102866

                         
Query: 62     ggagcgttccg 72
              |||||||||||
Sbjct: 102867 ggagcgttccg 102877

---

>gb|AF494278.1| Chaetosphaeridium globosum chloroplast, complete genome
          Length = 131183

 Score =  325 bits (164), Expect = 4e-86
 Identities = 248/275 (90%), Gaps = 2/275 (0%)
 Strand = Plus / Minus

                                                                          
Query: 2      gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg--catcggta 59
              ||||||||||||| ||||||| |||||||||||||||||||||||   |   ||||||||
Sbjct: 124125 gaagatgaacgggactaagcggtctgccgaagctgtgggatgtcatttttgacatcggta 124066

                                                                          
Query: 60     ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 119
              ||||||||||| ||  ||| | ||||||   |||||||| |  || ||||||||||||| 
Sbjct: 124065 ggggagcgttctgctgtagggagaagcattagcgaaagcagatgtggacgaagcggaagt 124006

                                                                          
Query: 120    gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 179
              |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||
Sbjct: 124005 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 123946

                                                                          
Query: 180    gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 239
              | |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 123945 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatgaggccgaaagg 123886

                                                 
Query: 240    cgtagtcgatggacaacaggtcaatattcctgtac 274
              || |||||||||||||||||| |||||||||||||
Sbjct: 123885 cgcagtcgatggacaacaggtgaatattcctgtac 123851



 Score =  325 bits (164), Expect = 4e-86
 Identities = 248/275 (90%), Gaps = 2/275 (0%)
 Strand = Plus / Plus

                                                                         
Query: 2     gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg--catcggta 59
             ||||||||||||| ||||||| |||||||||||||||||||||||   |   ||||||||
Sbjct: 95741 gaagatgaacgggactaagcggtctgccgaagctgtgggatgtcatttttgacatcggta 95800

                                                                         
Query: 60    ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 119
             ||||||||||| ||  ||| | ||||||   |||||||| |  || ||||||||||||| 
Sbjct: 95801 ggggagcgttctgctgtagggagaagcattagcgaaagcagatgtggacgaagcggaagt 95860

                                                                         
Query: 120   gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 179
             |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||
Sbjct: 95861 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaag 95920

                                                                         
Query: 180   gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 239
             | |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 95921 ggttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatgaggccgaaagg 95980

                                                
Query: 240   cgtagtcgatggacaacaggtcaatattcctgtac 274
             || |||||||||||||||||| |||||||||||||
Sbjct: 95981 cgcagtcgatggacaacaggtgaatattcctgtac 96015

---

>gb|L42844.1|CSKCPRGOL Cosmarium botrytis large subunit ribosomal RNA gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 2669

 Score =  317 bits (160), Expect = 1e-83
 Identities = 253/283 (89%), Gaps = 2/283 (0%)
 Strand = Plus / Plus

                                                                        
Query: 2    gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaa--aatgcatcggta 59
            ||||||||||||| ||||||| ||||||||||||||||||||||    |  |||||||||
Sbjct: 1138 gaagatgaacgggactaagcggtctgccgaagctgtgggatgtccgttagggcatcggta 1197

                                                                        
Query: 60   ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 119
            ||||||||||||||   || | |||||| | | | || | || || ||||||||||||| 
Sbjct: 1198 ggggagcgttccgcaaaagggagaagcatcagtgcaaacaggtgtggacgaagcggaagt 1257

                                                                        
Query: 120  gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 179
            |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1258 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaag 1317

                                                                        
Query: 180  gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 239
            | ||||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||
Sbjct: 1318 ggttcctccgcaaggctcgtccacggagggtgagtcagggcctaagatcatgccgaacgg 1377

                                                       
Query: 240  cgtagtcgatggacaacaggtcaatattcctgtactacccctt 282
            || ||||||||||||||||||||| ||||||||||||| ||||
Sbjct: 1378 cgcagtcgatggacaacaggtcaagattcctgtactactcctt 1420

---

>gb|AF393590.1| Cosmarium botrytis large subunit ribosomal RNA (rrl) gene, partial
            sequence; chloroplast gene for chloroplast product
          Length = 2825

 Score =  317 bits (160), Expect = 1e-83
 Identities = 253/283 (89%), Gaps = 2/283 (0%)
 Strand = Plus / Plus

                                                                        
Query: 2    gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaa--aatgcatcggta 59
            ||||||||||||| ||||||| ||||||||||||||||||||||    |  |||||||||
Sbjct: 1151 gaagatgaacgggactaagcggtctgccgaagctgtgggatgtccgttagggcatcggta 1210

                                                                        
Query: 60   ggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagc 119
            ||||||||||||||   || | |||||| | | | || | || || ||||||||||||| 
Sbjct: 1211 ggggagcgttccgcaaaagggagaagcatcagtgcaaacaggtgtggacgaagcggaagt 1270

                                                                        
Query: 120  gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 179
            |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1271 gagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacccaag 1330

                                                                        
Query: 180  gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 239
            | ||||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||
Sbjct: 1331 ggttcctccgcaaggctcgtccacggagggtgagtcagggcctaagatcatgccgaacgg 1390

                                                       
Query: 240  cgtagtcgatggacaacaggtcaatattcctgtactacccctt 282
            || ||||||||||||||||||||| ||||||||||||| ||||
Sbjct: 1391 cgcagtcgatggacaacaggtcaagattcctgtactactcctt 1433

---

>gb|AF355767.1| Bruguiera gymnorrhiza 23S ribosomal RNA gene, complete sequence;
            chloroplast gene for chloroplast product
          Length = 2867

 Score =  307 bits (155), Expect = 1e-80
 Identities = 206/223 (92%)
 Strand = Plus / Plus

                                                                        
Query: 2    gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
            ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||
Sbjct: 1150 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatccgtagg 1209

                                                                        
Query: 62   ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
            |||||||||||||||| |||||||||||||||  |||  |||| ||||||||||||||||
Sbjct: 1210 ggagcgttccgccttaaagggaagcaaccgcgccagcaagggtggacgaagcggaagcga 1269

                                                                        
Query: 122  gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
             |||||| |||||||||||| ||||||||||||||||| |||||||| |||| | |||| 
Sbjct: 1270 aaatgtccgcttgagtaacgcaaacattggtgagaatctaatgcccccaaaaactaaggg 1329

                                                       
Query: 182  ttcctccgcaaggttcgtccacggagggtgagtcagggcctaa 224
            ||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1330 ttcctccgcaaggttcgtccacggagggtgagtcaaggcctaa 1372

---

>gb|AF393593.1| Coleochaete orbicularis small subunit ribosomal RNA (rrs) gene,
            partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala
            (trnA(ugc)) genes, complete sequence; large subunit
            ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes,
            complete sequence; and tRNA-Arg (trnR(acg)) gene, partial
            sequence; chloroplast genes for chloroplast products
          Length = 6131

 Score =  303 bits (153), Expect = 2e-79
 Identities = 243/273 (89%)
 Strand = Plus / Plus

                                                                        
Query: 2    gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
            ||||||||||||| ||||||||| ||||||| |||||||||||  || | ||||||||||
Sbjct: 4172 gaagatgaacgggactaagcgatttgccgaaactgtgggatgtttaagtacatcggtagg 4231

                                                                        
Query: 62   ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
            ||||||||| ||  ||||| |||||| | | |||| | |  || |||||||| |||| ||
Sbjct: 4232 ggagcgttctgctatagagtgaagcatcagtgaaaacagatgtggacgaagcagaagtga 4291

                                                                        
Query: 122  gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
            |||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||| 
Sbjct: 4292 gaatgtcggcttgagtaacgcaaacattggtgggaatccaatgccccgaaaacctaaggg 4351

                                                                        
Query: 182  ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
            |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 4352 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatgaggccgaaaggcg 4411

                                             
Query: 242  tagtcgatggacaacaggtcaatattcctgtac 274
             | |||||||| ||| |||||||||||||||||
Sbjct: 4412 caatcgatggataactggtcaatattcctgtac 4444

---

>dbj|AK060454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-G07, full
            insert sequence
          Length = 1109

 Score =  303 bits (153), Expect = 2e-79
 Identities = 153/153 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1    tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 957  tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 1016

                                                                        
Query: 61   gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1017 gggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcg 1076

                                             
Query: 121  agaatgtcggcttgagtaacgaaaacattggtg 153
            |||||||||||||||||||||||||||||||||
Sbjct: 1077 agaatgtcggcttgagtaacgaaaacattggtg 1109

---

>gb|AF393594.1| Coleochaete scutata large subunit ribosomal RNA (rrl) gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 2886

 Score =  280 bits (141), Expect = 2e-72
 Identities = 240/273 (87%)
 Strand = Plus / Plus

                                                                        
Query: 2    gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
            ||||||||| ||| ||||||||| ||||||| |||||||||||  || | ||||||||||
Sbjct: 1138 gaagatgaatgggactaagcgatttgccgaaactgtgggatgtttaagtacatcggtagg 1197

                                                                        
Query: 62   ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
            ||||||||| ||  ||||  |||||| | | |||| | |  || |||||||| |||| ||
Sbjct: 1198 ggagcgttctgctatagattgaagcatcagtgaaaacagatgtggacgaagcagaagtga 1257

                                                                        
Query: 122  gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
            |||||||||||||||||||| ||||||||||| ||||||||||||||||||||| |||| 
Sbjct: 1258 gaatgtcggcttgagtaacgcaaacattggtgggaatccaatgccccgaaaacctaaggg 1317

                                                                        
Query: 182  ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
            |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1318 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatgaggccgaaaggcg 1377

                                             
Query: 242  tagtcgatggacaacaggtcaatattcctgtac 274
             | |||||||| ||| ||| |||||||||||||
Sbjct: 1378 caatcgatggataacgggttaatattcctgtac 1410

---

>gb|AF393591.1| Coleochaete nitellarum large subunit ribosomal RNA (rrl) gene,
            complete sequence; chloroplast gene for chloroplast
            product
          Length = 2888

 Score =  280 bits (141), Expect = 2e-72
 Identities = 241/273 (88%), Gaps = 1/273 (0%)
 Strand = Plus / Plus

                                                                        
Query: 2    gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
            ||||||||| ||| ||||||||| ||||||| |||||||||||  || | ||||||||||
Sbjct: 1138 gaagatgaatgggactaagcgatttgccgaaactgtgggatgtttaa-tacatcggtagg 1196

                                                                        
Query: 62   ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
            ||||||||| ||  ||||| |||||| | | |||| | |  || |||||||| |||| ||
Sbjct: 1197 ggagcgttctgctatagagtgaagcaccagtgaaaacagatgtggacgaagcagaagtga 1256

                                                                        
Query: 122  gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
            |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| 
Sbjct: 1257 gaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaaggg 1316

                                                                        
Query: 182  ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
            |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct: 1317 ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatgaggccgacaggcg 1376

                                             
Query: 242  tagtcgatggacaacaggtcaatattcctgtac 274
             | |||||||| ||| ||| |||||||||||||
Sbjct: 1377 caatcgatggataacgggttaatattcctgtac 1409

---

>gb|L42854.1|SFCCPRGOL Scourfieldia sp. M561 large subunit ribosomal RNA gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 2568

 Score =  264 bits (133), Expect = 1e-67
 Identities = 196/217 (90%)
 Strand = Plus / Plus

                                                                        
Query: 55   cggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcg 114
            |||||||||||||||||||  ||| | |||||| | |||||||| || || |||||||||
Sbjct: 1192 cggtaggggagcgttccgctctagggtgaagcatcagcgaaagcaggtgtggacgaagcg 1251

                                                                        
Query: 115  gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 174
            |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct: 1252 gaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaacc 1311

                                                                        
Query: 175  ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 234
            | |||| ||||||||||||| ||||||||||||||||||||||| |||||||| ||||||
Sbjct: 1312 ctaagggttcctccgcaaggctcgtccacggagggtgagtcaggtcctaagataaggccg 1371

                                                 
Query: 235  aaaggcgtagtcgatggacaacaggtcaatattcctg 271
            |||||||||||||||||  | ||||| ||||||||||
Sbjct: 1372 aaaggcgtagtcgatggctatcaggttaatattcctg 1408

---

>gb|AY330869.1| Cynomorium coccineum clone Cyno_0 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2754

 Score =  260 bits (131), Expect = 2e-66
 Identities = 239/275 (86%), Gaps = 5/275 (1%)
 Strand = Plus / Plus

                                                                        
Query: 6    atgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggag 65
            |||||||||  ||||||||| |||||||||||||||||| |     ||||||||||||||
Sbjct: 1192 atgaacgggaataagcgatccgccgaagctgtgggatgtaa-----catcggtaggggag 1246

                                                                        
Query: 66   cgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaat 125
            ||||| |||||| ||||||||| | ||   ||| | ||| || ||||| |||| ||||||
Sbjct: 1247 cgttctgccttatagggaagcacctgcacgagcagtggtggatgaagcagaagtgagaat 1306

                                                                        
Query: 126  gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcc 185
            |||||||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 1307 gtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaacctaagggttcc 1366

                                                                        
Query: 186  tccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagt 245
            | ||||||||||||||||| ||||||||||||| ||||||||||  | ||||||  ||||
Sbjct: 1367 ttcgcaaggttcgtccacgtagggtgagtcaggtcctaagatcatactgaaaggtttagt 1426

                                               
Query: 246  cgatggacaacaggtcaatattcctgtactacccc 280
             ||||||||| |||| |||||||||||||||||||
Sbjct: 1427 tgatggacaataggttaatattcctgtactacccc 1461

---

>gb|AF393610.1| Spirogyra maxima large subunit ribosomal RNA (rrl) gene, partial
            sequence; chloroplast gene for chloroplast product
          Length = 2674

 Score =  260 bits (131), Expect = 2e-66
 Identities = 243/280 (86%), Gaps = 4/280 (1%)
 Strand = Plus / Plus

                                                                        
Query: 2    gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaa----aatgcatcgg 57
            ||||||||| ||| ||||||| |||||||||||||||||||||| |    ||   |||||
Sbjct: 1097 gaagatgaatgggactaagcggtctgccgaagctgtgggatgtctattataagatatcgg 1156

                                                                        
Query: 58   taggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaa 117
            ||||||||||||||||||||||  ||||||   ||| |||| |  || ||||||||||||
Sbjct: 1157 taggggagcgttccgccttagatagaagcattagcgtaagcagatgtggacgaagcggaa 1216

                                                                        
Query: 118  gcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccca 177
            | |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1217 gtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaaaaccca 1276

                                                                        
Query: 178  aggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaa 237
            ||| ||||||||||||| ||||||||||||||||||||||| |||||| | || || || 
Sbjct: 1277 agggttcctccgcaaggctcgtccacggagggtgagtcaggacctaaggtgagaccaaat 1336

                                                    
Query: 238  ggcgtagtcgatggacaacaggtcaatattcctgtactac 277
            || | | | ||||||||||||||  |||||||||||||||
Sbjct: 1337 ggtgcaattgatggacaacaggtttatattcctgtactac 1376

---

>gb|L49152.1|MEWCPRGOL Mesostigma viride large-subunit ribosomal RNA gene, partial sequence;
            chloroplast gene for chloroplast product
          Length = 2571

 Score =  254 bits (128), Expect = 1e-64
 Identities = 200/224 (89%)
 Strand = Plus / Plus

                                                                        
Query: 53   atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 112
            |||||||||||||||||||||  ||| | |||||| | ||| |||  |  || |||||||
Sbjct: 1193 atcggtaggggagcgttccgctatagggtgaagcatcagcgtaagtagatgtggacgaag 1252

                                                                        
Query: 113  cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 172
            |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1253 cggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaa 1312

                                                                        
Query: 173  acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 232
            ||| |||| ||||||||||||| ||||||||||||||| ||||||| ||||||   ||||
Sbjct: 1313 acctaagggttcctccgcaaggctcgtccacggagggttagtcaggacctaaggaaaggc 1372

                                                        
Query: 233  cgaaaggcgtagtcgatggacaacaggtcaatattcctgtacta 276
            ||||||||||| |||||||||||||||| |||||||||||||||
Sbjct: 1373 cgaaaggcgtattcgatggacaacaggttaatattcctgtacta 1416

---

>gb|AF166114.1|AF166114 Mesostigma viride chloroplast DNA, complete genome
          Length = 118360

 Score =  254 bits (128), Expect = 1e-64
 Identities = 200/224 (89%)
 Strand = Plus / Minus

                                                                          
Query: 53     atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 112
              |||||||||||||||||||||  ||| | |||||| | ||| |||  |  || |||||||
Sbjct: 114469 atcggtaggggagcgttccgctatagggtgaagcatcagcgtaagtagatgtggacgaag 114410

                                                                          
Query: 113    cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 172
              |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 114409 cggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaa 114350

                                                                          
Query: 173    acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 232
              ||| |||| ||||||||||||| ||||||||||||||| ||||||| ||||||   ||||
Sbjct: 114349 acctaagggttcctccgcaaggctcgtccacggagggttagtcaggacctaaggaaaggc 114290

                                                          
Query: 233    cgaaaggcgtagtcgatggacaacaggtcaatattcctgtacta 276
              ||||||||||| |||||||||||||||| |||||||||||||||
Sbjct: 114289 cgaaaggcgtattcgatggacaacaggttaatattcctgtacta 114246



 Score =  254 bits (128), Expect = 1e-64
 Identities = 200/224 (89%)
 Strand = Plus / Plus

                                                                         
Query: 53    atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 112
             |||||||||||||||||||||  ||| | |||||| | ||| |||  |  || |||||||
Sbjct: 87519 atcggtaggggagcgttccgctatagggtgaagcatcagcgtaagtagatgtggacgaag 87578

                                                                         
Query: 113   cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 172
             |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 87579 cggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaa 87638

                                                                         
Query: 173   acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 232
             ||| |||| ||||||||||||| ||||||||||||||| ||||||| ||||||   ||||
Sbjct: 87639 acctaagggttcctccgcaaggctcgtccacggagggttagtcaggacctaaggaaaggc 87698

                                                         
Query: 233   cgaaaggcgtagtcgatggacaacaggtcaatattcctgtacta 276
             ||||||||||| |||||||||||||||| |||||||||||||||
Sbjct: 87699 cgaaaggcgtattcgatggacaacaggttaatattcctgtacta 87742

---

>gb|L49150.1|NCHCPRGOL Chlorosarcina brevispinosa chloroplast large subunit ribosomal RNA
            (rrnL) gene
          Length = 7514

 Score =  252 bits (127), Expect = 5e-64
 Identities = 199/223 (89%)
 Strand = Plus / Plus

                                                                        
Query: 53   atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 112
            |||||||||||||||||||||  ||| | |||||| |  ||||||  || || |||||||
Sbjct: 1410 atcggtaggggagcgttccgctctagggtgaagcatcaacgaaagtaggtgtggacgaag 1469

                                                                        
Query: 113  cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 172
            |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1470 cggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 1529

                                                                        
Query: 173  acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 232
            ||| |||| ||||||| | ||||||||||| ||||||||||||||| ||||||   ||||
Sbjct: 1530 acctaaggattcctccactaggttcgtccatggagggtgagtcaggacctaaggcgaggc 1589

                                                       
Query: 233  cgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 275
            |||||||||||||||||||  ||||||| ||||||||||||||
Sbjct: 1590 cgaaaggcgtagtcgatggcaaacaggttaatattcctgtact 1632



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                 
Query: 6    atgaacggggctaagcgatctgccgaagctgtgggat 42
            ||||||||| ||||||| |||||||||||||||||||
Sbjct: 1293 atgaacgggactaagcggtctgccgaagctgtgggat 1329

---

>gb|L42853.1|PYTCPRGOL Pyramimonas parkeae large subunit ribosomal RNA gene, partial
            sequence; chloroplast gene for chloroplast product
          Length = 2665

 Score =  250 bits (126), Expect = 2e-63
 Identities = 159/170 (93%)
 Strand = Plus / Plus

                                                                        
Query: 106  gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 165
            ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1282 gacgacgcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 1341

                                                                        
Query: 166  cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 225
            |||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 1342 cccgaaaacctaaggtttcctccgcaaggctcgtccacggagggtgagtcaggacctaag 1401

                                                              
Query: 226  atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 275
               |||||||||||||||||||||||  ||||||| ||||||||||||||
Sbjct: 1402 gcaaggccgaaaggcgtagtcgatggcaaacaggttaatattcctgtact 1451



 Score = 42.1 bits (21), Expect = 0.95
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 6    atgaacggggctaagcgatctgccgaagctgtg 38
            ||||||||| ||||||  |||||||||||||||
Sbjct: 1162 atgaacgggactaagcagtctgccgaagctgtg 1194

---

>gb|AF393608.1| Pyramimonas parkeae small subunit ribosomal RNA (rrs) gene, partial
            sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc))
            genes, complete sequence; and large subunit ribosomal RNA
            (rrl) gene, partial sequence; chloroplast genes for
            chloroplast products
          Length = 4577

 Score =  250 bits (126), Expect = 2e-63
 Identities = 159/170 (93%)
 Strand = Plus / Plus

                                                                        
Query: 106  gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 165
            ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3051 gacgacgcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 3110

                                                                        
Query: 166  cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 225
            |||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 3111 cccgaaaacctaaggtttcctccgcaaggctcgtccacggagggtgagtcaggacctaag 3170

                                                              
Query: 226  atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 275
               |||||||||||||||||||||||  ||||||| ||||||||||||||
Sbjct: 3171 gcaaggccgaaaggcgtagtcgatggcaaacaggttaatattcctgtact 3220



 Score = 42.1 bits (21), Expect = 0.95
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 6    atgaacggggctaagcgatctgccgaagctgtg 38
            ||||||||| ||||||  |||||||||||||||
Sbjct: 2931 atgaacgggactaagcagtctgccgaagctgtg 2963

---

>gb|L42846.1|GLZCPRGOL Gloeotilopsis sterilis large subunit ribosomal RNA gene, partial
            sequence; chloroplast
          Length = 2661

 Score =  242 bits (122), Expect = 5e-61
 Identities = 158/170 (92%)
 Strand = Plus / Plus

                                                                        
Query: 106  gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 165
            ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1268 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1327

                                                                        
Query: 166  cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 225
            |||||||||| |||| ||||||| | ||||||||||| ||||||||||||||||||||||
Sbjct: 1328 cccgaaaacctaagggttcctccactaggttcgtccatggagggtgagtcagggcctaag 1387

                                                              
Query: 226  atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 275
               |||||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 1388 gcgaggccgaaaggcgtagtcgatggaaaacaggttaatattcctgtact 1437



 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 53   atcggtaggggagcgttccgc 73
            |||||||||||||||||||||
Sbjct: 1215 atcggtaggggagcgttccgc 1235



 Score = 42.1 bits (21), Expect = 0.95
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                             
Query: 6    atgaacggggctaagcgatctgccgaagctgtg 38
            ||||||||| |||||||  ||||||||||||||
Sbjct: 1150 atgaacgggactaagcggcctgccgaagctgtg 1182

---

>gb|U38804.1|PPU38804 Porphyra purpurea chloroplast, complete genome
          Length = 191028

 Score =  242 bits (122), Expect = 5e-61
 Identities = 233/269 (86%), Gaps = 2/269 (0%)
 Strand = Plus / Plus

                                                                          
Query: 6      atgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggag 65
              ||||||||| |||||  || |||||||||||||||||||  | |  ||||||||||||||
Sbjct: 189139 atgaacgggactaagtaatttgccgaagctgtgggatgtttata--catcggtaggggag 189196

                                                                          
Query: 66     cgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaat 125
              ||||| |  ||||   ||||||   ||||||||||| || ||| || | |||||||||||
Sbjct: 189197 cgttctgtattaggttgaagcattagcgaaagcgggtgtggacaaaacagaagcgagaat 189256

                                                                          
Query: 126    gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcc 185
              |||||||| |||| |||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 189257 gtcggcttaagtagcgaaaacattggtgagaatccaatgccccgaaaacctaaggattcc 189316

                                                                          
Query: 186    tccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagt 245
              |||| ||||||||||| |||||||||||||||||||||||   |||| |||| |||||||
Sbjct: 189317 tccggaaggttcgtccgcggagggtgagtcagggcctaaggcgaggctgaaaagcgtagt 189376

                                           
Query: 246    cgatggacaacaggtcaatattcctgtac 274
              ||||||| ||||||| |||||||||||||
Sbjct: 189377 cgatggataacaggttaatattcctgtac 189405



 Score =  242 bits (122), Expect = 5e-61
 Identities = 233/269 (86%), Gaps = 2/269 (0%)
 Strand = Plus / Plus

                                                                          
Query: 6      atgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggag 65
              ||||||||| |||||  || |||||||||||||||||||  | |  ||||||||||||||
Sbjct: 150696 atgaacgggactaagtaatttgccgaagctgtgggatgtttata--catcggtaggggag 150753

                                                                          
Query: 66     cgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaat 125
              ||||| |  ||||   ||||||   ||||||||||| || ||| || | |||||||||||
Sbjct: 150754 cgttctgtattaggttgaagcattagcgaaagcgggtgtggacaaaacagaagcgagaat 150813

                                                                          
Query: 126    gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcc 185
              |||||||| |||| |||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 150814 gtcggcttaagtagcgaaaacattggtgagaatccaatgccccgaaaacctaaggattcc 150873

                                                                          
Query: 186    tccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagt 245
              |||| ||||||||||| |||||||||||||||||||||||   |||| |||| |||||||
Sbjct: 150874 tccggaaggttcgtccgcggagggtgagtcagggcctaaggcgaggctgaaaagcgtagt 150933

                                           
Query: 246    cgatggacaacaggtcaatattcctgtac 274
              ||||||| ||||||| |||||||||||||
Sbjct: 150934 cgatggataacaggttaatattcctgtac 150962

---

>gb|L42848.1|NEHCPRGOL Parietochloris pseudoalveolaris large subunit ribosomal RNA gene,
            partial sequence; chloroplast gene for chloroplast
            product
          Length = 2834

 Score =  236 bits (119), Expect = 3e-59
 Identities = 158/171 (92%)
 Strand = Plus / Plus

                                                                        
Query: 106  gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 165
            ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1432 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1491

                                                                        
Query: 166  cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 225
            |||||||||| |||| ||||||| | ||||||||||| ||||||||||||||| ||||||
Sbjct: 1492 cccgaaaacctaagggttcctccactaggttcgtccatggagggtgagtcaggacctaag 1551

                                                               
Query: 226  atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtacta 276
              ||||||||||||||| ||||||||| ||||||| |||||||||||||||
Sbjct: 1552 gccaggccgaaaggcgtcgtcgatggaaaacaggttaatattcctgtacta 1602



 Score = 46.1 bits (23), Expect = 0.061
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                               
Query: 6    atgaacggggctaagcgatctgccgaagctgtggg 40
            ||||||||| |||||||  ||||||||||||||||
Sbjct: 1213 atgaacgggactaagcggcctgccgaagctgtggg 1247

---

>gb|AY958086.1| Zygnema circumcarinatum chloroplast, complete genome
          Length = 165372

 Score =  230 bits (116), Expect = 2e-57
 Identities = 198/224 (88%), Gaps = 1/224 (0%)
 Strand = Plus / Plus

                                                                        
Query: 53   atcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaag 112
            ||||||||||||||||||||| |||||  ||||||   ||| |||| || || ||||| |
Sbjct: 1601 atcggtaggggagcgttccgcgttagatcgaagcattagcgtaagcaggtgtggacgagg 1660

                                                                        
Query: 113  cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 172
            |||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||||
Sbjct: 1661 cggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccctgaaa 1720

                                                                        
Query: 173  acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 232
            ||| |||| ||||| |||||||||||||||||  |||||||||||| |||||||||| ||
Sbjct: 1721 acctaaggattcctacgcaaggttcgtccacgtggggtgagtcaggacctaagatcaagc 1780

                                                        
Query: 233  cgaaaggcgtagtcgatggacaacaggtcaatattcctgtacta 276
            |||| |||| |||||||||| ||||||| || ||||||||||||
Sbjct: 1781 cgaatggcgcagtcgatggataacaggt-aacattcctgtacta 1823



 Score = 50.1 bits (25), Expect = 0.004
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                             
Query: 6    atgaacggggctaagcgatctgccgaagctgtg 38
            ||||||||| ||||||| |||||||||||||||
Sbjct: 1547 atgaacgggactaagcggtctgccgaagctgtg 1579

---

>emb|AM084277.1| Porphyridium aerugineum chloroplast 16S rRNA gene (partial), 23S rRNA
            gene (partial), tRNA-Ile gene and ITS1, strain SAG 43.94
          Length = 4290

 Score =  228 bits (115), Expect = 8e-57
 Identities = 214/247 (86%), Gaps = 5/247 (2%)
 Strand = Plus / Plus

                                                                        
Query: 6    atgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggag 65
            ||||||||| |||||| || |||||||||||||||||     |||  |||||||||||||
Sbjct: 2695 atgaacgggactaagcaatttgccgaagctgtgggat-----aatttatcggtaggggag 2749

                                                                        
Query: 66   cgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaat 125
            ||||| || |||||  ||||||   ||| ||||||| || |||||||| |||| ||||||
Sbjct: 2750 cgttctgcattagattgaagcattagcgtaagcgggtgtggacgaagcagaagtgagaat 2809

                                                                        
Query: 126  gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcc 185
            ||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 2810 gtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaaacctaaggtttcc 2869

                                                                        
Query: 186  tccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagt 245
            || | ||||||||||| |||||||||||||||| ||||||   |||| |||| |||||||
Sbjct: 2870 tctggaaggttcgtccgcggagggtgagtcaggacctaaggcgaggctgaaaagcgtagt 2929

                   
Query: 246  cgatgga 252
            |||||||
Sbjct: 2930 cgatgga 2936

---

>emb|AM084275.1| Cyanoptyche gloeocystis cyanelle 16S rRNA gene (partial), 23S rRNA
            gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1,
            strain SAG 34.90
          Length = 4586

 Score =  228 bits (115), Expect = 8e-57
 Identities = 196/223 (87%)
 Strand = Plus / Plus

                                                                        
Query: 52   catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 111
            ||||||||||||||||||||| | ||| | ||||||    || ||| | | || ||||||
Sbjct: 3019 catcggtaggggagcgttccgtcatagggtgaagcactaacgtaagtgagtgtggacgaa 3078

                                                                        
Query: 112  gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 171
             |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 3079 acggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaa 3138

                                                                        
Query: 172  aacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcagg 231
            ||||||||| ||||||||||||| ||||||||||||||||||||||| ||||||   |||
Sbjct: 3139 aacccaagggttcctccgcaaggctcgtccacggagggtgagtcaggacctaaggcgagg 3198

                                                       
Query: 232  ccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 274
            ||||||||||||||||||||| ||| | | |||||||| ||||
Sbjct: 3199 ccgaaaggcgtagtcgatggataacggattaatattcccgtac 3241



 Score = 46.1 bits (23), Expect = 0.061
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                   
Query: 6    atgaacggggctaagcgatctgccgaagctgtgggatgt 44
            ||||| ||| |||||| || |||||||||||||||||||
Sbjct: 2956 atgaatgggactaagctatttgccgaagctgtgggatgt 2994

---

>gb|L42986.1|RTCCPRGOLA Carteria lunzensis
          Length = 4448

 Score =  226 bits (114), Expect = 3e-56
 Identities = 195/222 (87%)
 Strand = Plus / Plus

                                                                        
Query: 54   tcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagc 113
            ||||||||||||||||||||  | | | |||||   | || ||| |||||| ||||||||
Sbjct: 1273 tcggtaggggagcgttccgctctcgggtgaagctttcacggaagtgggggtggacgaagc 1332

                                                                        
Query: 114  ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 173
            ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1333 ggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 1392

                                                                        
Query: 174  cccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggcc 233
            || |||| ||||||| | ||| ||||||| || |||| ||||||| |||||||  |||||
Sbjct: 1393 cctaagggttcctccactaggctcgtccatggggggttagtcaggacctaagactaggcc 1452

                                                      
Query: 234  gaaaggcgtagtcgatggacaacaggtcaatattcctgtact 275
            ||||||||| ||||||||| ||||||| ||||||||||||||
Sbjct: 1453 gaaaggcgtcgtcgatggaaaacaggttaatattcctgtact 1494

---

>gb|L43357.1|CHLCPRRNL Chlorella vulgaris chloroplast large subunit ribosomal RNA (rrnL)
            gene
          Length = 3669

 Score =  226 bits (114), Expect = 3e-56
 Identities = 156/170 (91%)
 Strand = Plus / Plus

                                                                        
Query: 106  gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 165
            ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1238 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1297

                                                                        
Query: 166  cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 225
            |||||||||| |||| ||||||| | ||||||||||| ||||||||||||||| ||||||
Sbjct: 1298 cccgaaaacctaaggattcctccactaggttcgtccatggagggtgagtcaggacctaag 1357

                                                              
Query: 226  atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 275
               |||||||||||||||||||||||  ||||||| ||||||||||||||
Sbjct: 1358 gcgaggccgaaaggcgtagtcgatggcaaacaggttaatattcctgtact 1407



 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 22   gatctgccgaagctgtgggat 42
            |||||||||||||||||||||
Sbjct: 1151 gatctgccgaagctgtgggat 1171

---

>dbj|AB001684.1| Chlorella vulgaris C-27 chloroplast DNA, complete sequence
          Length = 150613

 Score =  226 bits (114), Expect = 3e-56
 Identities = 156/170 (91%)
 Strand = Plus / Plus

                                                                         
Query: 106   gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 165
             ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 26047 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 26106

                                                                         
Query: 166   cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 225
             |||||||||| |||| ||||||| | ||||||||||| ||||||||||||||| ||||||
Sbjct: 26107 cccgaaaacctaaggattcctccactaggttcgtccatggagggtgagtcaggacctaag 26166

                                                               
Query: 226   atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 275
                |||||||||||||||||||||||  ||||||| ||||||||||||||
Sbjct: 26167 gcgaggccgaaaggcgtagtcgatggcaaacaggttaatattcctgtact 26216



 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 22    gatctgccgaagctgtgggat 42
             |||||||||||||||||||||
Sbjct: 25960 gatctgccgaagctgtgggat 25980

---

>dbj|AP006715.1| Porphyra yezoensis chloroplast DNA, complete genome
          Length = 191952

 Score =  226 bits (114), Expect = 3e-56
 Identities = 231/269 (85%), Gaps = 2/269 (0%)
 Strand = Plus / Plus

                                                                          
Query: 6      atgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggag 65
              ||||||||| |||||  || |||||||||||||||||||  | |  ||||||||||||||
Sbjct: 190062 atgaacgggactaagtaatttgccgaagctgtgggatgtttata--catcggtaggggag 190119

                                                                          
Query: 66     cgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaat 125
              ||||| |  ||||   ||||||   ||||||||||| || ||| || | |||| ||||||
Sbjct: 190120 cgttctgtattagtttgaagcattagcgaaagcgggtgtggacaaaacagaagtgagaat 190179

                                                                          
Query: 126    gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcc 185
              |||||||| |||| |||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 190180 gtcggcttaagtagcgaaaacattggtgagaatccaatgccccgaaaacctaaggattcc 190239

                                                                          
Query: 186    tccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagt 245
              |||| ||||||||||| |||||||||||||||| ||||||   |||| |||| |||||||
Sbjct: 190240 tccggaaggttcgtccgcggagggtgagtcaggacctaaggcgaggctgaaaagcgtagt 190299

                                           
Query: 246    cgatggacaacaggtcaatattcctgtac 274
              ||||||| ||||||| |||||||||||||
Sbjct: 190300 cgatggataacaggttaatattcctgtac 190328



 Score =  226 bits (114), Expect = 3e-56
 Identities = 231/269 (85%), Gaps = 2/269 (0%)
 Strand = Plus / Plus

                                                                          
Query: 6      atgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggag 65
              ||||||||| |||||  || |||||||||||||||||||  | |  ||||||||||||||
Sbjct: 151489 atgaacgggactaagtaatttgccgaagctgtgggatgtttata--catcggtaggggag 151546

                                                                          
Query: 66     cgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcgagaat 125
              ||||| |  ||||   ||||||   ||||||||||| || ||| || | |||| ||||||
Sbjct: 151547 cgttctgtattagtttgaagcattagcgaaagcgggtgtggacaaaacagaagtgagaat 151606

                                                                          
Query: 126    gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcc 185
              |||||||| |||| |||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 151607 gtcggcttaagtagcgaaaacattggtgagaatccaatgccccgaaaacctaaggattcc 151666

                                                                          
Query: 186    tccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagt 245
              |||| ||||||||||| |||||||||||||||| ||||||   |||| |||| |||||||
Sbjct: 151667 tccggaaggttcgtccgcggagggtgagtcaggacctaaggcgaggctgaaaagcgtagt 151726

                                           
Query: 246    cgatggacaacaggtcaatattcctgtac 274
              ||||||| ||||||| |||||||||||||
Sbjct: 151727 cgatggataacaggttaatattcctgtac 151755

---

>gb|AF393601.1| Mesotaenium caldariorum large subunit ribosomal RNA (rrl) gene,
            partial sequence; chloroplast gene for chloroplast
            product
          Length = 2691

 Score =  224 bits (113), Expect = 1e-55
 Identities = 238/279 (85%), Gaps = 3/279 (1%)
 Strand = Plus / Plus

                                                                        
Query: 2    gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatg---catcggt 58
            ||||||||| ||| ||||||| ||||||||||||||| |||||  ||||    |||||||
Sbjct: 1102 gaagatgaatgggactaagcggtctgccgaagctgtgagatgtttaaatataacatcggt 1161

                                                                        
Query: 59   aggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaag 118
            ||||||||||||||| ||||   ||||||   ||| |||||   || ||| |||||||||
Sbjct: 1162 aggggagcgttccgcattaggttgaagcactagcgtaagcgaatgtggacaaagcggaag 1221

                                                                        
Query: 119  cgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaa 178
             |||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||
Sbjct: 1222 tgagaatgtcggcttgagtaacgcaaacactggtgagaatccagtgccccgaaaacccaa 1281

                                                                        
Query: 179  ggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaag 238
            || ||||| || ||||||||||| || ||||||||||||  |||||| | | ||| || |
Sbjct: 1282 ggattcctacggaaggttcgtccgcgtagggtgagtcagaacctaaggtaaagccaaacg 1341

                                                   
Query: 239  gcgtagtcgatggacaacaggtcaatattcctgtactac 277
            |||||||||||||| ||||||| ||||||||||||||||
Sbjct: 1342 gcgtagtcgatggataacaggttaatattcctgtactac 1380

---

>gb|L43356.1|CRECPRRNLG Chlamydomonas zebra chloroplast large subunit ribosomal RNA (rrnL)
            gene
          Length = 4038

 Score =  220 bits (111), Expect = 2e-54
 Identities = 156/171 (91%)
 Strand = Plus / Plus

                                                                        
Query: 106  gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 165
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1326 gacgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 1385

                                                                        
Query: 166  cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 225
            |||||||||| |||| ||||||| | ||||||||||| || |||| ||||||| ||||||
Sbjct: 1386 cccgaaaacctaagggttcctccactaggttcgtccatggggggttagtcaggacctaag 1445

                                                               
Query: 226  atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtacta 276
            |  ||||| |||||||| ||||||||| ||||||| |||||||||||||||
Sbjct: 1446 actaggccaaaaggcgtcgtcgatggaaaacaggttaatattcctgtacta 1496

---

>emb|X68919.1|CHCZRRNL1 Chloroplast Chlamydomonas zebra rrnL gene, exon 1
          Length = 2572

 Score =  220 bits (111), Expect = 2e-54
 Identities = 156/171 (91%)
 Strand = Plus / Plus

                                                                        
Query: 106  gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 165
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1326 gacgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 1385

                                                                        
Query: 166  cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 225
            |||||||||| |||| ||||||| | ||||||||||| || |||| ||||||| ||||||
Sbjct: 1386 cccgaaaacctaagggttcctccactaggttcgtccatggggggttagtcaggacctaag 1445

                                                               
Query: 226  atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtacta 276
            |  ||||| |||||||| ||||||||| ||||||| |||||||||||||||
Sbjct: 1446 actaggccaaaaggcgtcgtcgatggaaaacaggttaatattcctgtacta 1496

---

>gb|AF355763.1| Rhizophora apiculata 23S ribosomal RNA gene, complete sequence;
            chloroplast gene for chloroplast product
          Length = 2913

 Score =  218 bits (110), Expect = 7e-54
 Identities = 204/229 (89%), Gaps = 6/229 (2%)
 Strand = Plus / Plus

                                                                        
Query: 2    gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1173 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatcggtagg 1232

                                                                        
Query: 62   ggagcgttccgccttagagggaagcaac--cgcgaaagcgggggtcgacgaagcgg-aag 118
            |||||||||||||||| | |||| || |  ||||||   |||| | |||||| ||| || 
Sbjct: 1233 ggagcgttccgccttaaaaggaaacacccgcgcgaacaaggggttggacgaaacggaaac 1292

                                                                        
Query: 119  cgagaatgtcggcttgagtaacg-aaaaca-ttggtgagaatccaatgccccgaaaaccc 176
            | ||||||||||||||||||||| |||||| |||||||||||| ||||||||||||||| 
Sbjct: 1293 caagaatgtcggcttgagtaacgcaaaacatttggtgagaatctaatgccccgaaaacct 1352

                                                             
Query: 177  aaggtttcctccgc-aaggttcgtccacggagggtgagtcagggcctaa 224
            || | ||||||| | |||||||||||||||||||||||||| |||||||
Sbjct: 1353 aaaggttcctccccaaaggttcgtccacggagggtgagtcaaggcctaa 1401

---

>emb|AM084274.1| Glaucocystis nostochinearum cyanelle 16S rRNA gene (partial), 23S
            rRNA gene (partial), tRNA-Ile gene, tRNA-Ala gene and
            ITS1, strain SAG 45.88
          Length = 3065

 Score =  216 bits (109), Expect = 3e-53
 Identities = 154/169 (91%)
 Strand = Plus / Plus

                                                                        
Query: 106  gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 165
            |||||| |||||| ||||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct: 1726 gacgaaacggaagtgagaatgtcggcttgagtagcgaaaacattggtgaaaatccaatgc 1785

                                                                        
Query: 166  cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 225
            ||||||||||||||| ||||||||||||| ||||||||||||||| ||||||| ||||||
Sbjct: 1786 cccgaaaacccaagggttcctccgcaaggctcgtccacggagggttagtcaggacctaag 1845

                                                             
Query: 226  atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 274
               |||||||||||||||||||||||| ||| ||| |||||||| ||||
Sbjct: 1846 gcgaggccgaaaggcgtagtcgatggataacgggttaatattcccgtac 1894



 Score = 46.1 bits (23), Expect = 0.061
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                   
Query: 6    atgaacggggctaagcgatctgccgaagctgtgggatgt 44
            ||||| ||| |||||| || |||||||||||||||||||
Sbjct: 1588 atgaaagggactaagctatttgccgaagctgtgggatgt 1626

---

>emb|AM084276.1| Compsopogon coeruleus chloroplast 16S rRNA gene (partial), 23S rRNA
            gene (partial), tRNA-Ile gene, tRNA-Ala gene and ITS1,
            strain SAG 36.94
          Length = 4420

 Score =  214 bits (108), Expect = 1e-52
 Identities = 217/251 (86%), Gaps = 3/251 (1%)
 Strand = Plus / Plus

                                                                        
Query: 26   tgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgccttagagggaag 85
            ||||||| |||||||||||    |||||||||||||||||||||| | ||||||  ||||
Sbjct: 2849 tgccgaatctgtgggatgt--ttatgcatcggtaggggagcgttctg-cttagattgaag 2905

                                                                        
Query: 86   caaccgcgaaagcgggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaa 145
            ||    |||||| ||  || ||| |||| |||| ||||||||||||||||||| ||||||
Sbjct: 2906 cattaacgaaagtggatgtggacaaagcagaagtgagaatgtcggcttgagtagcgaaaa 2965

                                                                        
Query: 146  cattggtgagaatccaatgccccgaaaacccaaggtttcctccgcaaggttcgtccacgg 205
            |||||||||||||||||||||||| ||||| |||| |||||| | |||| ||||||||||
Sbjct: 2966 cattggtgagaatccaatgccccggaaacctaaggattcctctggaaggctcgtccacgg 3025

                                                                        
Query: 206  agggtgagtcagggcctaagatcaggccgaaaggcgtagtcgatggacaacaggtcaata 265
            ||||| ||||||| ||||| || ||||||||||||||| | |||||||||||||| ||||
Sbjct: 3026 agggttagtcaggacctaaaatgaggccgaaaggcgtaattgatggacaacaggttaata 3085

                       
Query: 266  ttcctgtacta 276
            |||||||||||
Sbjct: 3086 ttcctgtacta 3096

---

>gb|DQ291132.1| Oltmannsiellopsis viridis chloroplast, complete genome
          Length = 151933

 Score =  210 bits (106), Expect = 2e-51
 Identities = 154/170 (90%)
 Strand = Plus / Plus

                                                                          
Query: 106    gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 165
              ||||||||||||| ||||||||| ||||||||| || |||||||||||||||||||||||
Sbjct: 137740 gacgaagcggaagtgagaatgtcagcttgagtagcgcaaacattggtgagaatccaatgc 137799

                                                                          
Query: 166    cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 225
              |||||||||| |||| ||||||| ||||| ||||||| ||||||||||||||| ||||||
Sbjct: 137800 cccgaaaacctaagggttcctccacaaggctcgtccatggagggtgagtcaggacctaag 137859

                                                                
Query: 226    atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 275
                 |||||||||||||||||||||||  ||||||| ||||||||||||||
Sbjct: 137860 gcgaggccgaaaggcgtagtcgatggcaaacaggttaatattcctgtact 137909



 Score =  210 bits (106), Expect = 2e-51
 Identities = 154/170 (90%)
 Strand = Plus / Minus

                                                                         
Query: 106   gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 165
             ||||||||||||| ||||||||| ||||||||| || |||||||||||||||||||||||
Sbjct: 47804 gacgaagcggaagtgagaatgtcagcttgagtagcgcaaacattggtgagaatccaatgc 47745

                                                                         
Query: 166   cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 225
             |||||||||| |||| ||||||| ||||| ||||||| ||||||||||||||| ||||||
Sbjct: 47744 cccgaaaacctaagggttcctccacaaggctcgtccatggagggtgagtcaggacctaag 47685

                                                               
Query: 226   atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 275
                |||||||||||||||||||||||  ||||||| ||||||||||||||
Sbjct: 47684 gcgaggccgaaaggcgtagtcgatggcaaacaggttaatattcctgtact 47635



 Score = 42.1 bits (21), Expect = 0.95
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                   
Query: 6      atgaacggggctaagcgatctgccgaagctgtgggat 42
              ||||||||| ||||||   ||||||||||||||||||
Sbjct: 137632 atgaacgggactaagctgcctgccgaagctgtgggat 137668



 Score = 42.1 bits (21), Expect = 0.95
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                  
Query: 6     atgaacggggctaagcgatctgccgaagctgtgggat 42
             ||||||||| ||||||   ||||||||||||||||||
Sbjct: 47912 atgaacgggactaagctgcctgccgaagctgtgggat 47876

---

>gb|L43542.1|TBXCPRRNL Trebouxia aggregata chloroplast large-subunit ribosomal RNA (rrnL)
            gene
          Length = 5398

 Score =  210 bits (106), Expect = 2e-51
 Identities = 151/166 (90%)
 Strand = Plus / Plus

                                                                        
Query: 110  aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 169
            ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1394 aagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 1453

                                                                        
Query: 170  aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 229
            |||||| |||| ||||||| | ||| ||||||| || |||| |||| || ||||||  ||
Sbjct: 1454 aaaacctaaggcttcctccactaggctcgtccatggggggttagtcgggacctaaggcca 1513

                                                          
Query: 230  ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 275
            ||||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 1514 ggccgaaaggcgtagtcgatggaaaacaggttaatattcctgtact 1559



 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                               
Query: 6    atgaacggggctaagcgatctgccgaagctgtggg 40
            ||||||||| ||||||| |||||||||||||||||
Sbjct: 1280 atgaacgggactaagcggtctgccgaagctgtggg 1314

---

>gb|L49153.1|MIXCPRGOL Microthamnion kuetzingianum large-subunit ribosomal RNA gene, partial
            sequence; chloroplast gene for chloroplast product
          Length = 2622

 Score =  210 bits (106), Expect = 2e-51
 Identities = 151/166 (90%)
 Strand = Plus / Plus

                                                                        
Query: 110  aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 169
            ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1236 aagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 1295

                                                                        
Query: 170  aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 229
            |||||| |||| ||||||| | ||||||||||| ||||||| ||||||| |||||   ||
Sbjct: 1296 aaaacctaagggttcctccactaggttcgtccatggagggttagtcaggacctaaagcca 1355

                                                          
Query: 230  ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 275
            |||||||||||||||| |||||| ||||||| ||||||||||||||
Sbjct: 1356 ggccgaaaggcgtagttgatggaaaacaggttaatattcctgtact 1401



 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 53   atcggtaggggagcgttccg 72
            ||||||||||||||||||||
Sbjct: 1179 atcggtaggggagcgttccg 1198

---

>emb|Z18289.1|PPC16SRNA Palmaria palmata Chloroplast for 16SrRNA gene
          Length = 4870

 Score =  210 bits (106), Expect = 2e-51
 Identities = 151/166 (90%)
 Strand = Plus / Plus

                                                                        
Query: 110  aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 169
            |||| |||| |||||||||||||| |||| ||||||||||||||||||||||||||||||
Sbjct: 2999 aagcagaagtgagaatgtcggcttaagtagcgaaaacattggtgagaatccaatgccccg 3058

                                                                        
Query: 170  aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 229
            |||||| ||||||||||| | |||||||||||||||||||||||||||||||||||   |
Sbjct: 3059 aaaacctaaggtttcctctggaaggttcgtccacggagggtgagtcagggcctaaggcga 3118

                                                          
Query: 230  ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 275
            ||| |||| ||||||||||||||  |||||| ||||||||||||||
Sbjct: 3119 ggctgaaaagcgtagtcgatggatgacaggttaatattcctgtact 3164



 Score = 46.1 bits (23), Expect = 0.061
 Identities = 40/45 (88%), Gaps = 3/45 (6%)
 Strand = Plus / Plus

                                                         
Query: 26   tgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttc 70
            |||||||||||||||||||  ||   |||||||||||||||||||
Sbjct: 2919 tgccgaagctgtgggatgtttaa---catcggtaggggagcgttc 2960

---

>tpg|BK000554.2| TPA: TPA_inf: Chlamydomonas reinhardtii chloroplast, complete genome
          Length = 203828

 Score =  208 bits (105), Expect = 7e-51
 Identities = 153/169 (90%)
 Strand = Plus / Minus

                                                                          
Query: 106    gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 165
              ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 151116 gacgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 151057

                                                                          
Query: 166    cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 225
              |||||||||| |||| ||||||| | ||||||||||| || |||| ||||||| ||||||
Sbjct: 151056 cccgaaaacctaagggttcctccactaggttcgtccatggggggttagtcaggacctaag 150997

                                                               
Query: 226    atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 274
              |  ||||| || ||||| ||||||||| ||||||| |||||||||||||
Sbjct: 150996 actaggccaaacggcgtcgtcgatggaaaacaggttaatattcctgtac 150948



 Score =  208 bits (105), Expect = 7e-51
 Identities = 153/169 (90%)
 Strand = Plus / Plus

                                                                         
Query: 106   gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 165
             ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43087 gacgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 43146

                                                                         
Query: 166   cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 225
             |||||||||| |||| ||||||| | ||||||||||| || |||| ||||||| ||||||
Sbjct: 43147 cccgaaaacctaagggttcctccactaggttcgtccatggggggttagtcaggacctaag 43206

                                                              
Query: 226   atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 274
             |  ||||| || ||||| ||||||||| ||||||| |||||||||||||
Sbjct: 43207 actaggccaaacggcgtcgtcgatggaaaacaggttaatattcctgtac 43255

---

>emb|X16686.1|CHCR7S3S C. reinhardtii plastid DNA for 7S, 3S and 23S rRNA
          Length = 2603

 Score =  208 bits (105), Expect = 7e-51
 Identities = 153/169 (90%)
 Strand = Plus / Plus

                                                                        
Query: 106  gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 165
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1259 gacgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 1318

                                                                        
Query: 166  cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 225
            |||||||||| |||| ||||||| | ||||||||||| || |||| ||||||| ||||||
Sbjct: 1319 cccgaaaacctaagggttcctccactaggttcgtccatggggggttagtcaggacctaag 1378

                                                             
Query: 226  atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 274
            |  ||||| || ||||| ||||||||| ||||||| |||||||||||||
Sbjct: 1379 actaggccaaacggcgtcgtcgatggaaaacaggttaatattcctgtac 1427

---

>emb|Z15151.1|CHCGRRNL Chloroplast Chlamydomonas gelatinosa rrnL gene
          Length = 2904

 Score =  208 bits (105), Expect = 7e-51
 Identities = 144/157 (91%)
 Strand = Plus / Plus

                                                                        
Query: 120  gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaag 179
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1287 gagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacctaag 1346

                                                                        
Query: 180  gtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaagg 239
            | ||||||| | ||||||||||| || |||| ||||||| ||||||| |||||| |||||
Sbjct: 1347 ggttcctccactaggttcgtccatggggggttagtcaggacctaagaccaggccaaaagg 1406

                                                 
Query: 240  cgtagtcgatggacaacaggtcaatattcctgtacta 276
            ||| ||||||||| ||||||| |||||||||||||||
Sbjct: 1407 cgtcgtcgatggaaaacaggttaatattcctgtacta 1443

---

>gb|AY330874.1| Cynomorium coccineum clone Cyno_5 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2737

 Score =  206 bits (104), Expect = 3e-50
 Identities = 155/172 (90%)
 Strand = Plus / Plus

                                                                        
Query: 109  gaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcccc 168
            ||||| |||| |||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1270 gaagcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgcccc 1329

                                                                        
Query: 169  gaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatc 228
            ||||||| |||| ||||| ||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 1330 gaaaacctaagggttccttcgcaaggttcgtccacgtagggtgagtcaggtcctaagatc 1389

                                                                
Query: 229  aggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccc 280
            |  | ||||||  |||| ||||||||| |||| ||||||||| |||||||||
Sbjct: 1390 atactgaaaggtttagttgatggacaataggttaatattcctatactacccc 1441



 Score = 44.1 bits (22), Expect = 0.24
 Identities = 51/61 (83%), Gaps = 6/61 (9%)
 Strand = Plus / Plus

                                                                        
Query: 17   taagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgcctt 76
            ||||||| | |||||||||||||||||| ||      ||||||||||||||||| |||||
Sbjct: 1174 taagcgacccgccgaagctgtgggatgtaaa------tcggtaggggagcgttctgcctt 1227

             
Query: 77   a 77
            |
Sbjct: 1228 a 1228

---

>gb|AF393596.1| Entransia fimbriata large subunit ribosomal RNA (rrl) gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 2840

 Score =  206 bits (104), Expect = 3e-50
 Identities = 146/160 (91%)
 Strand = Plus / Plus

                                                                        
Query: 115  gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 174
            |||| |||||||||||||||||||||| |||| | ||||||||||| |||||||||||||
Sbjct: 1253 gaagtgagaatgtcggcttgagtaacgcaaacgtgggtgagaatcccatgccccgaaaac 1312

                                                                        
Query: 175  ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 234
            | |||| ||||| || |||| ||||||||| |||||||||||||||||||||| | ||||
Sbjct: 1313 ctaagggttccttcggaaggctcgtccacgaagggtgagtcagggcctaagatgatgccg 1372

                                                    
Query: 235  aaaggcgtagtcgatggacaacaggtcaatattcctgtac 274
            ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1373 aaaggcgtagtcgatggacaacaggtcaaaattcctgtac 1412

---

>gb|L43500.1|RTCCPRRNL Carteria olivieri
          Length = 5667

 Score =  204 bits (103), Expect = 1e-49
 Identities = 148/163 (90%)
 Strand = Plus / Plus

                                                                        
Query: 113  cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 172
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1872 cggaagtgagaatgttggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 1931

                                                                        
Query: 173  acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 232
            ||| |||| ||||||  ||||||||||||| || |||| ||||||||||||||   ||||
Sbjct: 1932 acctaagggttcctctacaaggttcgtccatggggggttagtcagggcctaaggcgaggc 1991

                                                       
Query: 233  cgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 275
            |||| ||||||||||||||| ||||||| ||||||||||||||
Sbjct: 1992 cgaatggcgtagtcgatggaaaacaggttaatattcctgtact 2034

---

>gb|L43351.1|CRECPRRNLB Chlamydomonas agloeformis chloroplast large subunit ribosomal RNA
            (rrnL) gene
          Length = 3978

 Score =  204 bits (103), Expect = 1e-49
 Identities = 148/163 (90%)
 Strand = Plus / Plus

                                                                        
Query: 113  cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 172
            |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1318 cggaagtgagaatgtcggcttgagtaacgaaaacattggtgtgaatccaatgccccgaaa 1377

                                                                        
Query: 173  acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 232
            |||   || ||||||| | ||||||||||| || |||||||||||| |||||||| ||||
Sbjct: 1378 accgttgggttcctccactaggttcgtccatggggggtgagtcaggacctaagattaggc 1437

                                                       
Query: 233  cgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 275
            |||||||||| ||||||||| ||||||| ||||||||||||||
Sbjct: 1438 cgaaaggcgtcgtcgatggaaaacaggttaatattcctgtact 1480



 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 53   atcggtaggggagcgttccg 72
            ||||||||||||||||||||
Sbjct: 1259 atcggtaggggagcgttccg 1278



 Score = 40.1 bits (20), Expect = 3.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 11   cggggctaagcgatctgccgaagctgtg 38
            |||| ||||| |||||||||||||||||
Sbjct: 1185 cgggactaagtgatctgccgaagctgtg 1212

---

>gb|L42987.1|RTCCPRGOLB Carteria radiosa large subunit ribosomal RNA gene, complete sequence;
            chloroplast gene for chloroplast product
          Length = 2864

 Score =  204 bits (103), Expect = 1e-49
 Identities = 157/175 (89%)
 Strand = Plus / Plus

                                                                        
Query: 101  gggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcc 160
            |||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1496 gggtggacgaagcggaagtgagaatgtcggcttaagtaacgaaaacattggtgagaatcc 1555

                                                                        
Query: 161  aatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggc 220
            ||||||||||||||| |||| ||||||| | ||| ||||||| || |||| ||||||| |
Sbjct: 1556 aatgccccgaaaacctaagggttcctccactaggctcgtccatggggggttagtcaggac 1615

                                                                   
Query: 221  ctaagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 275
            ||||||  |||||||||||||| ||||||||| ||||||  ||||||||||||||
Sbjct: 1616 ctaagactaggccgaaaggcgtcgtcgatggaaaacaggcgaatattcctgtact 1670

---

>gb|L42858.1|CRECPRGOLA Chlamydomonas gigantea large subunit ribosomal RNA gene, partial
            sequence; chloroplast gene for chloroplast product
          Length = 2888

 Score =  202 bits (102), Expect = 4e-49
 Identities = 147/162 (90%)
 Strand = Plus / Plus

                                                                        
Query: 114  ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 173
            ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1420 ggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 1479

                                                                        
Query: 174  cccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggcc 233
            || |||| ||||||| | ||||||||||  || |||||||||||| ||||||  ||||||
Sbjct: 1480 cctaagggttcctccaccaggttcgtccgtggggggtgagtcaggacctaaggccaggcc 1539

                                                      
Query: 234  gaaaggcgtagtcgatggacaacaggtcaatattcctgtact 275
            ||||||||| ||||||||  ||||||| ||||||||||||||
Sbjct: 1540 gaaaggcgtcgtcgatggcaaacaggttaatattcctgtact 1581

---

>dbj|AK119524.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-E06, full
           insert sequence
          Length = 1809

 Score =  198 bits (100), Expect = 7e-48
 Identities = 100/100 (100%)
 Strand = Plus / Plus

                                                                       
Query: 188 cgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcg 247
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   cgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagtcg 60

                                                   
Query: 248 atggacaacaggtcaatattcctgtactaccccttgttgg 287
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  atggacaacaggtcaatattcctgtactaccccttgttgg 100

---

>gb|L43501.1|CRECPRRNLJ Chlamydomonas callosa chloroplast large subunit ribosomal RNA (rrnL),
            site-specific DNA endonuclease I-CcaI genes
          Length = 5999

 Score =  196 bits (99), Expect = 3e-47
 Identities = 138/151 (91%)
 Strand = Plus / Plus

                                                                        
Query: 126  gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcc 185
            |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 3449 gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacctaagggttcc 3508

                                                                        
Query: 186  tccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagt 245
            ||| | ||||||||||| || |||| ||||||| |||||||||||||| || ||||| ||
Sbjct: 3509 tccactaggttcgtccatggggggttagtcaggacctaagatcaggccaaacggcgtcgt 3568

                                           
Query: 246  cgatggacaacaggtcaatattcctgtacta 276
            ||||||| ||||||| |||||||||||||||
Sbjct: 3569 cgatggaaaacaggttaatattcctgtacta 3599

---

>gb|L42850.1|PMKCPRGOL Pleurastrum terrestre large subunit ribosomal RNA (rrnL) gene,
            partial sequence; chloroplast gene for chloroplast
            product
          Length = 2786

 Score =  196 bits (99), Expect = 3e-47
 Identities = 153/171 (89%)
 Strand = Plus / Plus

                                                                        
Query: 106  gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 165
            ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1369 gacgaagcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1428

                                                                        
Query: 166  cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 225
            |||||||||| |||| |||| |||  ||| |||||| ||| |||| ||||||| ||||||
Sbjct: 1429 cccgaaaacctaagggttccaccggtagggtcgtccgcggtgggttagtcaggacctaag 1488

                                                               
Query: 226  atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtacta 276
              |||||||||||||| |||||||||  ||||||| |||||||||||||||
Sbjct: 1489 gccaggccgaaaggcgcagtcgatggcaaacaggtgaatattcctgtacta 1539

---

>gb|AY584519.1| Nostoc punctiforme strain ATCC 29133 23S ribosomal RNA gene, partial
            sequence
          Length = 2446

 Score =  194 bits (98), Expect = 1e-46
 Identities = 152/170 (89%)
 Strand = Plus / Plus

                                                                        
Query: 106  gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 165
            |||||| |||||| ||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 859  gacgaaacggaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 918

                                                                        
Query: 166  cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 225
            ||||||| || |||||||||||||| |||||||||| |||||||| ||||||| ||||||
Sbjct: 919  cccgaaaccctaaggtttcctccgccaggttcgtccccggagggttagtcaggacctaag 978

                                                              
Query: 226  atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 275
               |||||||| ||||||||||||||||||| ||| || ||||| |||||
Sbjct: 979  gcgaggccgaacggcgtagtcgatggacaacgggttaaaattcccgtact 1028



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                
Query: 6   atgaacggggctaagcgatctgccgaagctgtgggat 42
           ||||||||||||||||||| | |||||||||||||||
Sbjct: 756 atgaacggggctaagcgatgtaccgaagctgtgggat 792



 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 53  atcggtaggggagcgttccg 72
           ||||||||||||||||||||
Sbjct: 805 atcggtaggggagcgttccg 824

---

>gb|L42984.1|ANKCPRGOL Ankistrodesmus stipitatus chloroplast large-subunit ribosomal RNA
            (rrnL), site-specific DNA endonuclease I-AstI gene
          Length = 4859

 Score =  194 bits (98), Expect = 1e-46
 Identities = 146/162 (90%)
 Strand = Plus / Plus

                                                                        
Query: 114  ggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaa 173
            ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1323 ggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccggaaa 1382

                                                                        
Query: 174  cccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggcc 233
            || |||| ||||||| ||||| ||||||| || |||||||||||| ||||||   |||||
Sbjct: 1383 cctaagggttcctccacaaggctcgtccatggggggtgagtcaggacctaaggcgaggcc 1442

                                                      
Query: 234  gaaaggcgtagtcgatggacaacaggtcaatattcctgtact 275
            ||| ||||||||||||||  ||||||| ||||||||||||||
Sbjct: 1443 gaacggcgtagtcgatggcaaacaggttaatattcctgtact 1484



 Score = 48.1 bits (24), Expect = 0.015
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                            
Query: 11   cggggctaagcgatctgccgaagctgtgggat 42
            |||| ||||||| |||||||||||||||||||
Sbjct: 1154 cgggactaagcggtctgccgaagctgtgggat 1185

---

>gb|L42845.1|FRICPRGOL Friedmannia israeliensis large subunit ribosomal RNA gene, partial
            sequence; chloroplast gene for chloroplast product
          Length = 2704

 Score =  194 bits (98), Expect = 1e-46
 Identities = 149/166 (89%)
 Strand = Plus / Plus

                                                                        
Query: 110  aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 169
            ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1299 aagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 1358

                                                                        
Query: 170  aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 229
            |||||| |||| |||||   | ||||||||||| | ||||| ||||||| ||||||  ||
Sbjct: 1359 aaaacctaagggttcctttactaggttcgtccatgaagggttagtcaggacctaaggcca 1418

                                                          
Query: 230  ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 275
            | |||||||| |||||||||||| ||||||| ||||||||||||||
Sbjct: 1419 gaccgaaaggtgtagtcgatggagaacaggttaatattcctgtact 1464



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 35/37 (94%)
 Strand = Plus / Plus

                                                 
Query: 6    atgaacggggctaagcgatctgccgaagctgtgggat 42
            ||||||||| ||||||| |||||||||||||||||||
Sbjct: 1156 atgaacgggactaagcggtctgccgaagctgtgggat 1192



 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 53   atcggtaggggagcgttccgc 73
            |||||||||||||||||||||
Sbjct: 1242 atcggtaggggagcgttccgc 1262

---

>gb|L43503.1|CRECPRRNLL Chlamydomonas pallidostigmatica chloroplast large subunit ribosomal
            RNA (rrnL), site-specific DNA endonuclease I-CpaI,
            site-specific DNA endonuclease I-CpaIII, site-specific
            DNA endonuclease I-CpaIV, site-specific DNA endonuclease
            I-CpaV genes
          Length = 8217

 Score =  192 bits (97), Expect = 4e-46
 Identities = 145/161 (90%)
 Strand = Plus / Plus

                                                                        
Query: 115  gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 174
            |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1542 gaagtgagaatgttggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 1601

                                                                        
Query: 175  ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 234
            | |||| ||||||| | ||||||||||  || |||||||||||| ||||||   ||||||
Sbjct: 1602 ctaagggttcctccactaggttcgtccgtggggggtgagtcaggacctaaggcgaggccg 1661

                                                     
Query: 235  aaaggcgtagtcgatggacaacaggtcaatattcctgtact 275
            |||||||||||||||||  ||||||| ||||||||||||||
Sbjct: 1662 aaaggcgtagtcgatggcaaacaggttaatattcctgtact 1702

---

>emb|X68899.1|CHCPRRNX1 Chloroplast Chlamydomonas pallidostigmatica rrnL gene, exon 1
          Length = 2219

 Score =  192 bits (97), Expect = 4e-46
 Identities = 145/161 (90%)
 Strand = Plus / Plus

                                                                        
Query: 115  gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 174
            |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1542 gaagtgagaatgttggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 1601

                                                                        
Query: 175  ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 234
            | |||| ||||||| | ||||||||||  || |||||||||||| ||||||   ||||||
Sbjct: 1602 ctaagggttcctccactaggttcgtccgtggggggtgagtcaggacctaaggcgaggccg 1661

                                                     
Query: 235  aaaggcgtagtcgatggacaacaggtcaatattcctgtact 275
            |||||||||||||||||  ||||||| ||||||||||||||
Sbjct: 1662 aaaggcgtagtcgatggcaaacaggttaatattcctgtact 1702

---

>gb|AF137379.1| Nephroselmis olivacea chloroplast DNA, complete genome
          Length = 200799

 Score =  190 bits (96), Expect = 2e-45
 Identities = 189/220 (85%)
 Strand = Plus / Minus

                                                                          
Query: 56     ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 115
              |||||||||||||||||||| || | ||||| |   || ||| || ||| ||| | ||||
Sbjct: 170294 ggtaggggagcgttccgcctgagggagaagctattccggaaggggtggtggacaaggcgg 170235

                                                                          
Query: 116    aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 175
              ||| |||||||||||||||||||||| ||||  |||||||||||||| ||||||||||||
Sbjct: 170234 aagtgagaatgtcggcttgagtaacgcaaacgctggtgagaatccaacgccccgaaaacc 170175

                                                                          
Query: 176    caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccga 235
               |||| ||||| | ||||||||||||| ||||||||||||||| |||||||  |||||||
Sbjct: 170174 taagggttccttcacaaggttcgtccatggagggtgagtcaggacctaagacgaggccga 170115

                                                      
Query: 236    aaggcgtagtcgatggacaacaggtcaatattcctgtact 275
               |||||||||||||||  ||| ||| ||||||||||||||
Sbjct: 170114 caggcgtagtcgatggcaaactggttaatattcctgtact 170075



 Score =  190 bits (96), Expect = 2e-45
 Identities = 189/220 (85%)
 Strand = Plus / Plus

                                                                          
Query: 56     ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 115
              |||||||||||||||||||| || | ||||| |   || ||| || ||| ||| | ||||
Sbjct: 122632 ggtaggggagcgttccgcctgagggagaagctattccggaaggggtggtggacaaggcgg 122691

                                                                          
Query: 116    aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 175
              ||| |||||||||||||||||||||| ||||  |||||||||||||| ||||||||||||
Sbjct: 122692 aagtgagaatgtcggcttgagtaacgcaaacgctggtgagaatccaacgccccgaaaacc 122751

                                                                          
Query: 176    caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccga 235
               |||| ||||| | ||||||||||||| ||||||||||||||| |||||||  |||||||
Sbjct: 122752 taagggttccttcacaaggttcgtccatggagggtgagtcaggacctaagacgaggccga 122811

                                                      
Query: 236    aaggcgtagtcgatggacaacaggtcaatattcctgtact 275
               |||||||||||||||  ||| ||| ||||||||||||||
Sbjct: 122812 caggcgtagtcgatggcaaactggttaatattcctgtact 122851



 Score = 40.1 bits (20), Expect = 3.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 6      atgaacggggctaagcgatctgccgaagctgt 37
              ||||||||| |||||||  |||||||||||||
Sbjct: 170341 atgaacgggactaagcggcctgccgaagctgt 170310



 Score = 40.1 bits (20), Expect = 3.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 6      atgaacggggctaagcgatctgccgaagctgt 37
              ||||||||| |||||||  |||||||||||||
Sbjct: 122585 atgaacgggactaagcggcctgccgaagctgt 122616

---

>gb|DQ396875.1| Scenedesmus obliquus strain UTEX 393 chloroplast, complete genome
          Length = 161452

 Score =  190 bits (96), Expect = 2e-45
 Identities = 147/164 (89%)
 Strand = Plus / Minus

                                                                          
Query: 112    gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 171
              ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154933 gcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 154874

                                                                          
Query: 172    aacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcagg 231
              |||| |||| ||||||  ||||||||||||  || |||||||||||| ||||||   |||
Sbjct: 154873 aacctaagggttcctctacaaggttcgtccgtggggggtgagtcaggacctaaggcgagg 154814

                                                          
Query: 232    ccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 275
              ||||  ||||||||||||||  ||||||| ||||||||||||||
Sbjct: 154813 ccgagcggcgtagtcgatggcaaacaggttaatattcctgtact 154770



 Score =  190 bits (96), Expect = 2e-45
 Identities = 147/164 (89%)
 Strand = Plus / Plus

                                                                         
Query: 112   gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 171
             ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78959 gcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 79018

                                                                         
Query: 172   aacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcagg 231
             |||| |||| ||||||  ||||||||||||  || |||||||||||| ||||||   |||
Sbjct: 79019 aacctaagggttcctctacaaggttcgtccgtggggggtgagtcaggacctaaggcgagg 79078

                                                         
Query: 232   ccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 275
             ||||  ||||||||||||||  ||||||| ||||||||||||||
Sbjct: 79079 ccgagcggcgtagtcgatggcaaacaggttaatattcctgtact 79122



 Score = 40.1 bits (20), Expect = 3.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 11     cggggctaagcgatctgccgaagctgtgggat 42
              |||| |||||| ||||||||||||| ||||||
Sbjct: 155063 cgggactaagcaatctgccgaagctatgggat 155032



 Score = 40.1 bits (20), Expect = 3.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 11    cggggctaagcgatctgccgaagctgtgggat 42
             |||| |||||| ||||||||||||| ||||||
Sbjct: 78829 cgggactaagcaatctgccgaagctatgggat 78860

---

>gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome
          Length = 1842899

 Score =  190 bits (96), Expect = 2e-45
 Identities = 144/160 (90%)
 Strand = Plus / Plus

                                                                           
Query: 115     gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 174
               |||| ||||||||||||||||||| ||||||||| ||||||||||| ||||||||||| |
Sbjct: 1666713 gaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgccccgaaacc 1666772

                                                                           
Query: 175     ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 234
               | |||| ||||||||  ||| |||||| |||||||| |||| || |||||| ||||||||
Sbjct: 1666773 ctaagggttcctccggcaggctcgtccgcggagggttagtctggtcctaaggtcaggccg 1666832

                                                       
Query: 235     aaaggcgtagtcgatggacaacaggtcaatattcctgtac 274
               |||||||||||||||||| |||||||||||||||||||||
Sbjct: 1666833 aaaggcgtagtcgatggataacaggtcaatattcctgtac 1666872

---

>gb|L49156.1|PDICPRGOL Pediastrum biradiatum chloroplast large-subunit ribosomal RNA (rrnL)
            gene
          Length = 4173

 Score =  190 bits (96), Expect = 2e-45
 Identities = 147/164 (89%)
 Strand = Plus / Plus

                                                                        
Query: 112  gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 171
            |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1424 gcgggagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 1483

                                                                        
Query: 172  aacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcagg 231
            |||| |||| |||||   ||||||||||||| | ||||||||||||| ||||||   |||
Sbjct: 1484 aacctaagggttcctttacaaggttcgtccatgaagggtgagtcaggacctaaggcgagg 1543

                                                        
Query: 232  ccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 275
            |||| |||||||||||||||  |||||||  |||||||||||||
Sbjct: 1544 ccgacaggcgtagtcgatggcaaacaggtttatattcctgtact 1587

---

>gb|L43358.1|NEZCPRRNL Nephroselmis olivacea large subunit ribosomal RNA gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 2937

 Score =  190 bits (96), Expect = 2e-45
 Identities = 189/220 (85%)
 Strand = Plus / Plus

                                                                        
Query: 56   ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 115
            |||||||||||||||||||| || | ||||| |   || ||| || ||| ||| | ||||
Sbjct: 1223 ggtaggggagcgttccgcctgagggagaagctattccggaaggggtggtggacaaggcgg 1282

                                                                        
Query: 116  aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 175
            ||| |||||||||||||||||||||| ||||  |||||||||||||| ||||||||||||
Sbjct: 1283 aagtgagaatgtcggcttgagtaacgcaaacgctggtgagaatccaacgccccgaaaacc 1342

                                                                        
Query: 176  caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccga 235
             |||| ||||| | ||||||||||||| ||||||||||||||| |||||||  |||||||
Sbjct: 1343 taagggttccttcacaaggttcgtccatggagggtgagtcaggacctaagacgaggccga 1402

                                                    
Query: 236  aaggcgtagtcgatggacaacaggtcaatattcctgtact 275
             |||||||||||||||  ||| ||| ||||||||||||||
Sbjct: 1403 caggcgtagtcgatggcaaactggttaatattcctgtact 1442



 Score = 40.1 bits (20), Expect = 3.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 6    atgaacggggctaagcgatctgccgaagctgt 37
            ||||||||| |||||||  |||||||||||||
Sbjct: 1176 atgaacgggactaagcggcctgccgaagctgt 1207

---

>emb|AJ245645.1|PWI245645 Prototheca wickerhamii chloroplast partial genome
          Length = 22085

 Score =  188 bits (95), Expect = 7e-45
 Identities = 149/167 (89%)
 Strand = Plus / Plus

                                                                        
Query: 110  aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 169
            |||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 6983 aagcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 7042

                                                                        
Query: 170  aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 229
            |||||| |||| |||||   | ||||||||||| | ||||||||||||| ||||||   |
Sbjct: 7043 aaaacctaaggattcctttactaggttcgtccatgaagggtgagtcaggacctaaggcga 7102

                                                           
Query: 230  ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtacta 276
            ||||||||||||||||||||||  ||||||| |||||||||||||||
Sbjct: 7103 ggccgaaaggcgtagtcgatggcaaacaggttaatattcctgtacta 7149

---

>gb|AY835431.1| Pseudendoclonium akinetum chloroplast, complete genome
          Length = 195867

 Score =  188 bits (95), Expect = 7e-45
 Identities = 155/175 (88%)
 Strand = Plus / Plus

                                                                          
Query: 101    gggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcc 160
              |||| ||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 193107 gggttgacgacgcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatcc 193166

                                                                          
Query: 161    aatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggc 220
              |||| |||||||||| |||| |||||   ||||||||||||| | ||||||||||||| |
Sbjct: 193167 aatgtcccgaaaacctaagggttcctttacaaggttcgtccatgaagggtgagtcaggtc 193226

                                                                     
Query: 221    ctaagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 275
              |||||   ||| |||||||||||||||||||  |||||||||| |||||||||||
Sbjct: 193227 ctaaggcgaggtcgaaaggcgtagtcgatggcaaacaggtcaacattcctgtact 193281



 Score =  188 bits (95), Expect = 7e-45
 Identities = 155/175 (88%)
 Strand = Plus / Minus

                                                                          
Query: 101    gggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatcc 160
              |||| ||||| ||||||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 143675 gggttgacgacgcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatcc 143616

                                                                          
Query: 161    aatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggc 220
              |||| |||||||||| |||| |||||   ||||||||||||| | ||||||||||||| |
Sbjct: 143615 aatgtcccgaaaacctaagggttcctttacaaggttcgtccatgaagggtgagtcaggtc 143556

                                                                     
Query: 221    ctaagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 275
              |||||   ||| |||||||||||||||||||  |||||||||| |||||||||||
Sbjct: 143555 ctaaggcgaggtcgaaaggcgtagtcgatggcaaacaggtcaacattcctgtact 143501



 Score = 50.1 bits (25), Expect = 0.004
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                   
Query: 6      atgaacggggctaagcgatctgccgaagctgtgggat 42
              ||||||||| |||||||  ||||||||||||||||||
Sbjct: 193008 atgaacgggactaagcggcctgccgaagctgtgggat 193044



 Score = 50.1 bits (25), Expect = 0.004
 Identities = 34/37 (91%)
 Strand = Plus / Minus

                                                   
Query: 6      atgaacggggctaagcgatctgccgaagctgtgggat 42
              ||||||||| |||||||  ||||||||||||||||||
Sbjct: 143774 atgaacgggactaagcggcctgccgaagctgtgggat 143738

---

>gb|L42851.1|PTOCPRGOL Prototheca wickerhamii large subunit ribosomal RNA (rrnL) gene,
            partial sequence; chloroplast gene for chloroplast
            product
          Length = 2715

 Score =  188 bits (95), Expect = 7e-45
 Identities = 149/167 (89%)
 Strand = Plus / Plus

                                                                        
Query: 110  aagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccg 169
            |||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1334 aagcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccg 1393

                                                                        
Query: 170  aaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatca 229
            |||||| |||| |||||   | ||||||||||| | ||||||||||||| ||||||   |
Sbjct: 1394 aaaacctaaggattcctttactaggttcgtccatgaagggtgagtcaggacctaaggcga 1453

                                                           
Query: 230  ggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtacta 276
            ||||||||||||||||||||||  ||||||| |||||||||||||||
Sbjct: 1454 ggccgaaaggcgtagtcgatggcaaacaggttaatattcctgtacta 1500

---

>gb|L43352.1|CRECPRRNLC Chlamydomonas frankii chloroplast large subunit ribosomal RNA (rrnL)
            gene
          Length = 6750

 Score =  186 bits (94), Expect = 3e-44
 Identities = 136/150 (90%)
 Strand = Plus / Plus

                                                                        
Query: 126  gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcc 185
            |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 2747 gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacctaagggttcc 2806

                                                                        
Query: 186  tccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagt 245
            ||| | ||||||||||  || |||||||||||| ||||||   |||||||||||||||||
Sbjct: 2807 tccactaggttcgtccgtggggggtgagtcaggacctaaggcgaggccgaaaggcgtagt 2866

                                          
Query: 246  cgatggacaacaggtcaatattcctgtact 275
            ||||||  ||||||| ||||||||||||||
Sbjct: 2867 cgatggtaaacaggttaatattcctgtact 2896

---

>gb|L42861.1|KLBCPRGOL Klebsormidium flaccidum large subunit ribosomal RNA gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 2604

 Score =  186 bits (94), Expect = 3e-44
 Identities = 219/258 (84%), Gaps = 2/258 (0%)
 Strand = Plus / Plus

                                                                        
Query: 3    aagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
            |||||||||||| || |||||  ||||||| ||  |||||||| |||| |||||||||||
Sbjct: 1129 aagatgaacgggactcaagcggcctgccgaggccatgggatgtaaaaa-gcatcggtagg 1187

                                                                        
Query: 62   ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
            ||||||||||||   ||   |||||    |||| ||| || || ||||| ||||||| ||
Sbjct: 1188 ggagcgttccgcggcaggttgaagcgtaagcgagagcaggcgtggacgaggcggaagtga 1247

                                                                        
Query: 122  gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
            |||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||| 
Sbjct: 1248 gaatgtcggcttgagtaacgcaaacactggtgagaatccagtgccccgaaaacccaaggg 1307

                                                                        
Query: 182  ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
            |||| | | |||| |||||||||| ||||||||||||||||||| | |||||||| ||||
Sbjct: 1308 ttcccctggaaggctcgtccacggggggtgagtcagggcctaaggtgaggccgaagggcg 1367

                              
Query: 242  tagtcgatggacaacagg 259
             || ||||||||||||||
Sbjct: 1368 cagccgatggacaacagg 1385

---

>gb|AF393599.1| Klebsormidium subtilissimum large subunit ribosomal RNA (rrl) gene,
            complete sequence; chloroplast gene for chloroplast
            product
          Length = 2901

 Score =  186 bits (94), Expect = 3e-44
 Identities = 219/258 (84%), Gaps = 2/258 (0%)
 Strand = Plus / Plus

                                                                        
Query: 3    aagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
            |||||||||||| || |||||  ||||||| ||  |||||||| |||| |||||||||||
Sbjct: 1142 aagatgaacgggactcaagcggcctgccgaggccatgggatgtaaaaa-gcatcggtagg 1200

                                                                        
Query: 62   ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
            ||||||||||||   ||   |||||    |||| ||| || || ||||| ||||||| ||
Sbjct: 1201 ggagcgttccgcggcaggttgaagcgtaagcgagagcaggcgtggacgaggcggaagtga 1260

                                                                        
Query: 122  gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
            |||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||| 
Sbjct: 1261 gaatgtcggcttgagtaacgcaaacactggtgagaatccagtgccccgaaaacccaaggg 1320

                                                                        
Query: 182  ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
            |||| | | |||| |||||||||| ||||||||||||||||||| | |||||||| ||||
Sbjct: 1321 ttcccctggaaggctcgtccacggggggtgagtcagggcctaaggtgaggccgaagggcg 1380

                              
Query: 242  tagtcgatggacaacagg 259
             || ||||||||||||||
Sbjct: 1381 cagccgatggacaacagg 1398

---

>gb|AF393598.1| Klebsormidium flaccidum small subunit ribosomal RNA (rrs) gene,
            partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala
            (trnA(ugc)) genes, complete sequence; large subunit
            ribosomal RNA (rrl) gene, complete sequence; and 5S
            ribosomal RNA (rrf) gene, partial sequence; chloroplast
            genes for chloroplast products
          Length = 7627

 Score =  186 bits (94), Expect = 3e-44
 Identities = 219/258 (84%), Gaps = 2/258 (0%)
 Strand = Plus / Plus

                                                                        
Query: 3    aagatgaacggggct-aagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
            |||||||||||| || |||||  ||||||| ||  |||||||| |||| |||||||||||
Sbjct: 5716 aagatgaacgggactcaagcggcctgccgaggccatgggatgtaaaaa-gcatcggtagg 5774

                                                                        
Query: 62   ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
            ||||||||||||   ||   |||||    |||| ||| || || ||||| ||||||| ||
Sbjct: 5775 ggagcgttccgcggcaggttgaagcgtaagcgagagcaggcgtggacgaggcggaagtga 5834

                                                                        
Query: 122  gaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggt 181
            |||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||| 
Sbjct: 5835 gaatgtcggcttgagtaacgcaaacactggtgagaatccagtgccccgaaaacccaaggg 5894

                                                                        
Query: 182  ttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcg 241
            |||| | | |||| |||||||||| ||||||||||||||||||| | |||||||| ||||
Sbjct: 5895 ttcccctggaaggctcgtccacggggggtgagtcagggcctaaggtgaggccgaagggcg 5954

                              
Query: 242  tagtcgatggacaacagg 259
             || ||||||||||||||
Sbjct: 5955 cagccgatggacaacagg 5972

---

>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome
          Length = 2593857

 Score =  186 bits (94), Expect = 3e-44
 Identities = 151/170 (88%)
 Strand = Plus / Minus

                                                                           
Query: 106     gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 165
               |||||||| |||| ||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 2333581 gacgaagcagaagtgagaatgccggcttgagtagcgaaaacattggtgagaatccaatgc 2333522

                                                                           
Query: 166     cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 225
               ||||||| ||||||| ||||| || |||| |||||| || ||||| |||| || ||||||
Sbjct: 2333521 cccgaaaccccaagggttccttcggaaggctcgtccgcgaagggttagtcgggacctaag 2333462

                                                                 
Query: 226     atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 275
                  |||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 2333461 gcgaggccgaaaggcgtagtcgatggacaactggtcaatattccagtact 2333412

---

>emb|X68906.1|CHCFRRNL2 Chloroplast Chlamydomonas frankii rrnL gene, exon 2
          Length = 655

 Score =  186 bits (94), Expect = 3e-44
 Identities = 136/150 (90%)
 Strand = Plus / Plus

                                                                       
Query: 126 gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcc 185
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 1   gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacctaagggttcc 60

                                                                       
Query: 186 tccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagt 245
           ||| | ||||||||||  || |||||||||||| ||||||   |||||||||||||||||
Sbjct: 61  tccactaggttcgtccgtggggggtgagtcaggacctaaggcgaggccgaaaggcgtagt 120

                                         
Query: 246 cgatggacaacaggtcaatattcctgtact 275
           ||||||  ||||||| ||||||||||||||
Sbjct: 121 cgatggtaaacaggttaatattcctgtact 150

---

>gb|DQ174248.1| Phaeodactylum tricornutum 16S ribosomal RNA, tRNA-Ile, tRNA-Ala, 23S
            ribosomal RNA, and 5S ribosomal RNA genes, complete
            sequence; chloroplast
          Length = 5026

 Score =  184 bits (93), Expect = 1e-43
 Identities = 150/169 (88%)
 Strand = Plus / Plus

                                                                        
Query: 106  gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 165
            |||||||| |||| |||||||||||||||||||||||||| || ||||||||||| || |
Sbjct: 2981 gacgaagcagaagtgagaatgtcggcttgagtaacgaaaatataggtgagaatcctatac 3040

                                                                        
Query: 166  cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 225
            |||||||||||||||||||||||| |||| |||||| |||||||| ||||||| ||||||
Sbjct: 3041 cccgaaaacccaaggtttcctccggaaggctcgtccgcggagggtaagtcaggacctaag 3100

                                                             
Query: 226  atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 274
               |||| |||| |||||||||||||||||| ||| |||||||| ||||
Sbjct: 3101 gcgaggctgaaaagcgtagtcgatggacaacgggttaatattcccgtac 3149

---

>gb|L49148.1|CRECPRGOLF Chlamydomonas mexicana chloroplast large subunit ribosomal RNA (rrnL)
            gene
          Length = 4181

 Score =  184 bits (93), Expect = 1e-43
 Identities = 150/169 (88%)
 Strand = Plus / Plus

                                                                        
Query: 106  gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 165
            ||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 1293 gacgaggcggaagtgagaatgtcggcttgagtaacgaaaacatcggtgagaatccgatgc 1352

                                                                        
Query: 166  cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 225
            |||||||||| |||| ||||||| | ||| ||||||| || |||| ||||||| ||||||
Sbjct: 1353 cccgaaaacctaagggttcctccactaggctcgtccatggggggttagtcaggacctaag 1412

                                                             
Query: 226  atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 274
            | |||||| || ||||| ||||||||| ||||||| |||||||||||||
Sbjct: 1413 accaggccaaacggcgtcgtcgatggaaaacaggttaatattcctgtac 1461

---

>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome
          Length = 2696255

 Score =  184 bits (93), Expect = 1e-43
 Identities = 150/169 (88%)
 Strand = Plus / Plus

                                                                           
Query: 106     gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 165
               |||||| |||||| ||||||||||||||||||| ||||||||| ||||||||||| ||||
Sbjct: 1659733 gacgaaacggaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgc 1659792

                                                                           
Query: 166     cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 225
               ||||||| ||||||| |||||||| |||| |||||| |||||||| ||||||| ||||||
Sbjct: 1659793 cccgaaatcccaagggttcctccggaaggctcgtccgcggagggttagtcaggtcctaag 1659852

                                                                
Query: 226     atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 274
                  |||| |||  |||||||||||||||||||||| |||||||||||||
Sbjct: 1659853 gcgaggcagaagtgcgtagtcgatggacaacaggttaatattcctgtac 1659901



 Score =  184 bits (93), Expect = 1e-43
 Identities = 150/169 (88%)
 Strand = Plus / Minus

                                                                           
Query: 106     gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 165
               |||||| |||||| ||||||||||||||||||| ||||||||| ||||||||||| ||||
Sbjct: 1049011 gacgaaacggaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgc 1048952

                                                                           
Query: 166     cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 225
               ||||||| ||||||| |||||||| |||| |||||| |||||||| ||||||| ||||||
Sbjct: 1048951 cccgaaatcccaagggttcctccggaaggctcgtccgcggagggttagtcaggtcctaag 1048892

                                                                
Query: 226     atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 274
                  |||| |||  |||||||||||||||||||||| |||||||||||||
Sbjct: 1048891 gcgaggcagaagtgcgtagtcgatggacaacaggttaatattcctgtac 1048843

---

>gb|L42985.1|RTCCPRGOL Carteria crucifera large subunit ribosomal RNA gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 2920

 Score =  184 bits (93), Expect = 1e-43
 Identities = 144/161 (89%)
 Strand = Plus / Plus

                                                                        
Query: 115  gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 174
            ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1509 gaagcgagaatgttggtttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 1568

                                                                        
Query: 175  ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 234
            | |||| ||||||  ||||||||||||| || |||| ||||||| ||||||   ||||||
Sbjct: 1569 ctaagggttcctctacaaggttcgtccatggggggttagtcaggacctaaggcgaggccg 1628

                                                     
Query: 235  aaaggcgtagtcgatggacaacaggtcaatattcctgtact 275
            |  ||||||||||||||| ||||||| ||||||||||||||
Sbjct: 1629 agcggcgtagtcgatggaaaacaggttaatattcctgtact 1669

---

>emb|X00512.1|ANRN03 Anacystis nidulans 23S rRNA gene and flanking regions
          Length = 3282

 Score =  184 bits (93), Expect = 1e-43
 Identities = 150/169 (88%)
 Strand = Plus / Plus

                                                                        
Query: 106  gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 165
            |||||| |||||| ||||||||||||||||||| ||||||||| ||||||||||| ||||
Sbjct: 1495 gacgaaacggaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgc 1554

                                                                        
Query: 166  cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 225
            ||||||| ||||||| |||||||| |||| |||||| |||||||| ||||||| ||||||
Sbjct: 1555 cccgaaatcccaagggttcctccggaaggctcgtccgcggagggttagtcaggtcctaag 1614

                                                             
Query: 226  atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 274
               |||| |||  |||||||||||||||||||||| |||||||||||||
Sbjct: 1615 gcgaggcagaagtgcgtagtcgatggacaacaggttaatattcctgtac 1663

---

>emb|X68910.1|CHCMRRNL1 Chloroplast Chlamydomonas mexicana rrnL gene, exon 1
          Length = 1965

 Score =  184 bits (93), Expect = 1e-43
 Identities = 150/169 (88%)
 Strand = Plus / Plus

                                                                        
Query: 106  gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 165
            ||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 1293 gacgaggcggaagtgagaatgtcggcttgagtaacgaaaacatcggtgagaatccgatgc 1352

                                                                        
Query: 166  cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 225
            |||||||||| |||| ||||||| | ||| ||||||| || |||| ||||||| ||||||
Sbjct: 1353 cccgaaaacctaagggttcctccactaggctcgtccatggggggttagtcaggacctaag 1412

                                                             
Query: 226  atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 274
            | |||||| || ||||| ||||||||| ||||||| |||||||||||||
Sbjct: 1413 accaggccaaacggcgtcgtcgatggaaaacaggttaatattcctgtac 1461

---

>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome
          Length = 2695903

 Score =  184 bits (93), Expect = 1e-43
 Identities = 150/169 (88%)
 Strand = Plus / Minus

                                                                           
Query: 106     gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 165
               |||||| |||||| ||||||||||||||||||| ||||||||| ||||||||||| ||||
Sbjct: 2657053 gacgaaacggaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgc 2656994

                                                                           
Query: 166     cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 225
               ||||||| ||||||| |||||||| |||| |||||| |||||||| ||||||| ||||||
Sbjct: 2656993 cccgaaatcccaagggttcctccggaaggctcgtccgcggagggttagtcaggtcctaag 2656934

                                                                
Query: 226     atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 274
                  |||| |||  |||||||||||||||||||||| |||||||||||||
Sbjct: 2656933 gcgaggcagaagtgcgtagtcgatggacaacaggttaatattcctgtac 2656885



 Score =  184 bits (93), Expect = 1e-43
 Identities = 150/169 (88%)
 Strand = Plus / Plus

                                                                          
Query: 106    gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 165
              |||||| |||||| ||||||||||||||||||| ||||||||| ||||||||||| ||||
Sbjct: 571868 gacgaaacggaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgc 571927

                                                                          
Query: 166    cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 225
              ||||||| ||||||| |||||||| |||| |||||| |||||||| ||||||| ||||||
Sbjct: 571928 cccgaaatcccaagggttcctccggaaggctcgtccgcggagggttagtcaggtcctaag 571987

                                                               
Query: 226    atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 274
                 |||| |||  |||||||||||||||||||||| |||||||||||||
Sbjct: 571988 gcgaggcagaagtgcgtagtcgatggacaacaggttaatattcctgtac 572036

---

>gb|AY584525.1| Plectonema terebrans strain CCAP 1463-4 23S ribosomal RNA gene,
            partial sequence
          Length = 2440

 Score =  182 bits (92), Expect = 4e-43
 Identities = 143/160 (89%)
 Strand = Plus / Plus

                                                                        
Query: 115  gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 174
            |||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct: 866  gaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaacc 925

                                                                        
Query: 175  ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 234
            | |||| |||||||| |||| |||||| |||||||| |||| || ||||||   ||||||
Sbjct: 926  ctaagggttcctccggaaggctcgtccgcggagggttagtcgggacctaaggcgaggccg 985

                                                    
Query: 235  aaaggcgtagtcgatggacaacaggtcaatattcctgtac 274
            |||||||||||||||||||||| ||| |||||||| ||||
Sbjct: 986  aaaggcgtagtcgatggacaacgggttaatattcccgtac 1025

---

>gb|L42860.1|CGZCPRGOL Chlorogonium elongatum chloroplast large-subunit ribosomal RNA
            (rrnL), site-specific DNA endonuclease I-CelI gene
          Length = 3779

 Score =  182 bits (92), Expect = 4e-43
 Identities = 146/164 (89%)
 Strand = Plus / Plus

                                                                        
Query: 113  cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 172
            |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1306 cggaagtgagaatgtcggcttgagtaacgaaaacattggttagaatccaatgccccgaaa 1365

                                                                        
Query: 173  acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 232
            |||   || ||||||| | ||||||||||| || |||||||||||| ||||||   ||||
Sbjct: 1366 accgttgggttcctccactaggttcgtccatggggggtgagtcaggccctaaggctaggc 1425

                                                        
Query: 233  cgaaaggcgtagtcgatggacaacaggtcaatattcctgtacta 276
            |||||||||| ||||||||  ||||||| |||||||||||||||
Sbjct: 1426 cgaaaggcgtcgtcgatggcaaacaggttaatattcctgtacta 1469



 Score = 44.1 bits (22), Expect = 0.24
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                        
Query: 11   cggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttc 70
            |||| ||||| || |||||||||||||| ||  | |||||   |||||||||||||||||
Sbjct: 1204 cgggactaagtgacctgccgaagctgtgagacataaaaatatgtcggtaggggagcgttc 1263

              
Query: 71   cg 72
            ||
Sbjct: 1264 cg 1265

---

>gb|L49151.1|HAKCPRGOL Haematococcus lacustris chloroplast large-subunit ribosomal RNA
            (rrnL) gene
          Length = 6713

 Score =  180 bits (91), Expect = 2e-42
 Identities = 145/163 (88%)
 Strand = Plus / Plus

                                                                        
Query: 113  cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 172
            |||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 2841 cggaagtgagaatgttggcttgagtaacgaaaacattggtaagaatccaatgccccgaaa 2900

                                                                        
Query: 173  acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 232
            |||   || ||||||| | ||||||||||| || |||||||||||| ||||||   ||||
Sbjct: 2901 accgttgggttcctccactaggttcgtccatggggggtgagtcaggacctaaggcaaggc 2960

                                                       
Query: 233  cgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 275
            |||||||||||||||||||| ||||||| || |||||||||||
Sbjct: 2961 cgaaaggcgtagtcgatggaaaacaggttaagattcctgtact 3003



 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 53   atcggtaggggagcgttccg 72
            ||||||||||||||||||||
Sbjct: 2781 atcggtaggggagcgttccg 2800

---

>gb|L49149.1|CRECPRGOLG Chlamydomonas monadina chloroplast large subunit ribosomal RNA
            (rrnL), site-specific DNA endonuclease I-CmoI genes
          Length = 8176

 Score =  180 bits (91), Expect = 2e-42
 Identities = 142/159 (89%)
 Strand = Plus / Plus

                                                                        
Query: 117  agcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaaccc 176
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 1715 agcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacct 1774

                                                                        
Query: 177  aaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaa 236
            |||| ||||||| | ||| ||||||| || |||| ||||||| |||||||  ||| ||||
Sbjct: 1775 aagggttcctccactaggctcgtccatggggggttagtcaggtcctaagaaaaggtcgaa 1834

                                                   
Query: 237  aggcgtagtcgatggacaacaggtcaatattcctgtact 275
            ||||||| ||||||| |||||||| | || |||||||||
Sbjct: 1835 aggcgtattcgatgggcaacaggttactaatcctgtact 1873

---

>gb|L43502.1|CRECPRRNLK Chlamydomonas komma chloroplast large subunit ribosomal RNA (rrnL),
            site-specific DNA endonuclease I-CkoI genes
          Length = 5105

 Score =  180 bits (91), Expect = 2e-42
 Identities = 136/151 (90%)
 Strand = Plus / Plus

                                                                        
Query: 126  gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcc 185
            |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 2725 gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacctaagggttcc 2784

                                                                        
Query: 186  tccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagt 245
            ||| | ||||||||||| || |||| ||||||| |||||||  |||||||| ||||| ||
Sbjct: 2785 tccactaggttcgtccatggggggttagtcaggacctaagactaggccgaatggcgtcgt 2844

                                           
Query: 246  cgatggacaacaggtcaatattcctgtacta 276
            ||||||  ||||||| |||||||||||||||
Sbjct: 2845 cgatggcaaacaggttaatattcctgtacta 2875

---

>emb|X68928.1|CHCKRRNL2 Chloroplast Chlamydomonas komma rrnL gene, exon 2
          Length = 659

 Score =  180 bits (91), Expect = 2e-42
 Identities = 136/151 (90%)
 Strand = Plus / Plus

                                                                       
Query: 126 gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacccaaggtttcc 185
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||
Sbjct: 1   gtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacctaagggttcc 60

                                                                       
Query: 186 tccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccgaaaggcgtagt 245
           ||| | ||||||||||| || |||| ||||||| |||||||  |||||||| ||||| ||
Sbjct: 61  tccactaggttcgtccatggggggttagtcaggacctaagactaggccgaatggcgtcgt 120

                                          
Query: 246 cgatggacaacaggtcaatattcctgtacta 276
           ||||||  ||||||| |||||||||||||||
Sbjct: 121 cgatggcaaacaggttaatattcctgtacta 151

---

>gb|U30821.1|CPU30821 Cyanophora paradoxa cyanelle, complete genome
          Length = 135599

 Score =  180 bits (91), Expect = 2e-42
 Identities = 146/163 (89%), Gaps = 1/163 (0%)
 Strand = Plus / Minus

                                                                          
Query: 113    cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 172
              |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 114176 cggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaa 114117

                                                                          
Query: 173    acccaaggtttcc-tccgcaaggttcgtccacggagggtgagtcagggcctaagatcagg 231
              ||| |||| |||| | || |||| ||||||||| ||||||||||||| ||||||   |||
Sbjct: 114116 acctaagggttcctttcggaaggctcgtccacgaagggtgagtcaggacctaaggcgagg 114057

                                                         
Query: 232    ccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 274
              ||||||||||||||||||||| ||| |||||| ||||| ||||
Sbjct: 114056 ccgaaaggcgtagtcgatggataacgggtcaaaattcccgtac 114014



 Score =  180 bits (91), Expect = 2e-42
 Identities = 146/163 (89%), Gaps = 1/163 (0%)
 Strand = Plus / Plus

                                                                        
Query: 113  cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 172
            |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 3341 cggaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaa 3400

                                                                        
Query: 173  acccaaggtttcc-tccgcaaggttcgtccacggagggtgagtcagggcctaagatcagg 231
            ||| |||| |||| | || |||| ||||||||| ||||||||||||| ||||||   |||
Sbjct: 3401 acctaagggttcctttcggaaggctcgtccacgaagggtgagtcaggacctaaggcgagg 3460

                                                       
Query: 232  ccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 274
            ||||||||||||||||||||| ||| |||||| ||||| ||||
Sbjct: 3461 ccgaaaggcgtagtcgatggataacgggtcaaaattcccgtac 3503



 Score = 46.1 bits (23), Expect = 0.061
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                     
Query: 6      atgaacggggctaagcgatctgccgaagctgtgggatgt 44
              ||||| ||| |||||| || |||||||||||||||||||
Sbjct: 114292 atgaatgggactaagctatttgccgaagctgtgggatgt 114254



 Score = 46.1 bits (23), Expect = 0.061
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                   
Query: 6    atgaacggggctaagcgatctgccgaagctgtgggatgt 44
            ||||| ||| |||||| || |||||||||||||||||||
Sbjct: 3225 atgaatgggactaagctatttgccgaagctgtgggatgt 3263



 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 52     catcggtaggggagcgttccg 72
              |||||||||||||||||||||
Sbjct: 114237 catcggtaggggagcgttccg 114217



 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 52   catcggtaggggagcgttccg 72
            |||||||||||||||||||||
Sbjct: 3280 catcggtaggggagcgttccg 3300

---

>gb|L44126.1|SFFCPRGOL Scherffelia dubia chloroplast large-subunit ribosomal RNA (rrnL) gene
          Length = 3334

 Score =  178 bits (90), Expect = 6e-42
 Identities = 150/170 (88%)
 Strand = Plus / Plus

                                                                        
Query: 106  gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 165
            ||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||  |||
Sbjct: 1261 gacgaagcggaagtgagaatgtcggtttgagtaacgaaaacatcggtgagaatcctttgc 1320

                                                                        
Query: 166  cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 225
            |||||||||| |||| ||||| | ||||||||||||| ||||||| ||||||| ||||||
Sbjct: 1321 cccgaaaacctaagggttccttcacaaggttcgtccatggagggttagtcaggacctaag 1380

                                                              
Query: 226  atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 275
               || |||||||| |||||||||||  |||||||||| |||||||||||
Sbjct: 1381 gcaagaccgaaaggtgtagtcgatggcaaacaggtcaacattcctgtact 1430

---

>gb|L42992.1|TESCPRGOL Tetraselmis carteriiformis large subunit ribosomal RNA gene, complete
            sequence; chloroplast gene for chloroplast product
          Length = 2552

 Score =  178 bits (90), Expect = 6e-42
 Identities = 147/166 (88%)
 Strand = Plus / Plus

                                                                        
Query: 106  gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 165
            ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1225 gacgaagcggaagtgagaatgtcggtttgagtaacgaaaacattggtgagaatccaatgc 1284

                                                                        
Query: 166  cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 225
            |||||||||| |||| ||||| | | ||||||||||| ||||||| ||||||| ||||||
Sbjct: 1285 cccgaaaacctaagggttccttcactaggttcgtccatggagggttagtcaggacctaag 1344

                                                          
Query: 226  atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctg 271
               || |||||||| |||||||||||  | |||||||| |||||||
Sbjct: 1345 gcaagaccgaaaggtgtagtcgatggcaagcaggtcaacattcctg 1390



 Score = 48.1 bits (24), Expect = 0.015
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                            
Query: 26   tgccgaagctgtgggatgtcaaaatgcatcggtaggggagcgttccgc 73
            ||||||||||||||||| ||  ||   |||||||||||||||||||||
Sbjct: 1145 tgccgaagctgtgggatatcgtaagatatcggtaggggagcgttccgc 1192

---

>gb|AF393609.1| Scherffelia dubia small subunit ribosomal RNA (rrs) gene, complete
            sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc))
            genes, complete sequence; large subunit ribosomal RNA
            (rrl) gene, complete sequence; and putative site-specific
            DNA endonuclease (orf167) gene, complete cds; chloroplast
            genes for chloroplast products
          Length = 5476

 Score =  178 bits (90), Expect = 6e-42
 Identities = 150/170 (88%)
 Strand = Plus / Plus

                                                                        
Query: 106  gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 165
            ||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||  |||
Sbjct: 2999 gacgaagcggaagtgagaatgtcggtttgagtaacgaaaacatcggtgagaatcctttgc 3058

                                                                        
Query: 166  cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 225
            |||||||||| |||| ||||| | ||||||||||||| ||||||| ||||||| ||||||
Sbjct: 3059 cccgaaaacctaagggttccttcacaaggttcgtccatggagggttagtcaggacctaag 3118

                                                              
Query: 226  atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 275
               || |||||||| |||||||||||  |||||||||| |||||||||||
Sbjct: 3119 gcaagaccgaaaggtgtagtcgatggcaaacaggtcaacattcctgtact 3168

---

>gb|AF041468.1| Guillardia theta complete plastid genome
          Length = 121524

 Score =  178 bits (90), Expect = 6e-42
 Identities = 144/162 (88%)
 Strand = Plus / Minus

                                                                         
Query: 115   gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 174
             |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 39186 gaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaaac 39127

                                                                         
Query: 175   ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 234
             | |||| |||||||| |||| |||||| |||||||| ||||||| ||||||   ||||||
Sbjct: 39126 ctaaggattcctccggaaggctcgtccgcggagggtaagtcaggacctaaggcgaggccg 39067

                                                       
Query: 235   aaaggcgtagtcgatggacaacaggtcaatattcctgtacta 276
             ||||||||||   ||||||||| ||| |||||||| ||||||
Sbjct: 39066 aaaggcgtagctaatggacaacgggttaatattcccgtacta 39025



 Score =  178 bits (90), Expect = 6e-42
 Identities = 144/162 (88%)
 Strand = Plus / Plus

                                                                         
Query: 115   gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 174
             |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 20214 gaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaaac 20273

                                                                         
Query: 175   ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 234
             | |||| |||||||| |||| |||||| |||||||| ||||||| ||||||   ||||||
Sbjct: 20274 ctaaggattcctccggaaggctcgtccgcggagggtaagtcaggacctaaggcgaggccg 20333

                                                       
Query: 235   aaaggcgtagtcgatggacaacaggtcaatattcctgtacta 276
             ||||||||||   ||||||||| ||| |||||||| ||||||
Sbjct: 20334 aaaggcgtagctaatggacaacgggttaatattcccgtacta 20375

---

>gb|DQ275466.1| Arachis hypogaea clone PNDI 1 unknown RNA
          Length = 212

 Score =  178 bits (90), Expect = 6e-42
 Identities = 121/130 (93%), Gaps = 1/130 (0%)
 Strand = Plus / Minus

                                                                       
Query: 107 acgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgcc 166
           ||||| ||||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct: 192 acgaatcggaagcgagaatgtcggcttgagtaacgcaaacgttggtgagaatccaatgcc 133

                                                                       
Query: 167 ccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaaga 226
            |||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||  |
Sbjct: 132 tcgaaaacctaagggttcctccgcaaggtt-gtccacggagggtgagtcagggcctatca 74

                     
Query: 227 tcaggccgaa 236
           ||||||||||
Sbjct: 73  tcaggccgaa 64

---

>emb|Z67753.1|OSCHLPLXX Odontella sinensis complete chloroplast genome
          Length = 119704

 Score =  176 bits (89), Expect = 3e-41
 Identities = 149/169 (88%)
 Strand = Plus / Minus

                                                                         
Query: 106   gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 165
             |||||||| |||| |||||||||||||||||||||||||| || |||| |||||| || |
Sbjct: 49121 gacgaagcagaagtgagaatgtcggcttgagtaacgaaaatataggtgggaatcctatac 49062

                                                                         
Query: 166   cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 225
             |||||||||||||||||||||||| |||| |||||| |||||||| ||||||| ||||||
Sbjct: 49061 cccgaaaacccaaggtttcctccggaaggctcgtccgcggagggtaagtcaggacctaag 49002

                                                              
Query: 226   atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 274
                |||| |||| |||||||||||||||||| ||| |||||||| ||||
Sbjct: 49001 gcgaggctgaaaagcgtagtcgatggacaacgggttaatattcccgtac 48953



 Score =  176 bits (89), Expect = 3e-41
 Identities = 149/169 (88%)
 Strand = Plus / Plus

                                                                        
Query: 106  gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 165
            |||||||| |||| |||||||||||||||||||||||||| || |||| |||||| || |
Sbjct: 5238 gacgaagcagaagtgagaatgtcggcttgagtaacgaaaatataggtgggaatcctatac 5297

                                                                        
Query: 166  cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 225
            |||||||||||||||||||||||| |||| |||||| |||||||| ||||||| ||||||
Sbjct: 5298 cccgaaaacccaaggtttcctccggaaggctcgtccgcggagggtaagtcaggacctaag 5357

                                                             
Query: 226  atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 274
               |||| |||| |||||||||||||||||| ||| |||||||| ||||
Sbjct: 5358 gcgaggctgaaaagcgtagtcgatggacaacgggttaatattcccgtac 5406

---

>gb|L49157.1|STXCPRGOL Stigeoclonium helveticum chloroplast large-subunit ribosomal RNA
            (rrnL) gene
          Length = 6393

 Score =  176 bits (89), Expect = 3e-41
 Identities = 152/173 (87%)
 Strand = Plus / Plus

                                                                        
Query: 99   gggggtcgacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaat 158
            |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 3510 gggggtggacgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaat 3569

                                                                        
Query: 159  ccaatgccccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagg 218
            ||||||||| ||||||| |||| ||||| | | ||| ||||||| | ||||| ||||| |
Sbjct: 3570 ccaatgccctgaaaacctaagggttccttcactaggctcgtccatgaagggttagtcaag 3629

                                                                 
Query: 219  gcctaagatcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctg 271
             ||||||   |||||||| ||||||||||||||| | ||||| ||||||||||
Sbjct: 3630 acctaaggcaaggccgaagggcgtagtcgatggaaatcaggttaatattcctg 3682

---

>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome
          Length = 1709204

 Score =  174 bits (88), Expect = 1e-40
 Identities = 142/160 (88%)
 Strand = Plus / Plus

                                                                          
Query: 115    gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 174
              |||| ||||||||||||||||||| ||||||||| ||||||||||| ||||||||||| |
Sbjct: 320838 gaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgccccgaaacc 320897

                                                                          
Query: 175    ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 234
              | |||| ||||||||  ||| |||||| |||||||| |||| || ||||||   ||||||
Sbjct: 320898 ctaagggttcctccggcaggctcgtccgcggagggttagtctggacctaaggcgaggccg 320957

                                                      
Query: 235    aaaggcgtagtcgatggacaacaggtcaatattcctgtac 274
              |||||||||||||||||| |||||||||||||||||||||
Sbjct: 320958 aaaggcgtagtcgatggataacaggtcaatattcctgtac 320997

---

>gb|AY033310.1| Uncultured Prochlorococcus sp. MB11F02 16S ribosomal RNA gene,
            partial sequence; tRNA-Ile and tRNA-Ala genes, complete
            sequence; and 23S ribosomal RNA gene, partial sequence
          Length = 3916

 Score =  174 bits (88), Expect = 1e-40
 Identities = 142/160 (88%)
 Strand = Plus / Plus

                                                                        
Query: 115  gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 174
            |||| ||||||||||||||||||| ||||||||| ||||||||||| ||||||||||| |
Sbjct: 3261 gaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgccccgaaacc 3320

                                                                        
Query: 175  ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 234
            | |||| ||||||||  ||| |||||| |||||||| |||| || ||||||   ||||||
Sbjct: 3321 ctaagggttcctccggcaggctcgtccgcggagggttagtctggacctaaggcgaggccg 3380

                                                    
Query: 235  aaaggcgtagtcgatggacaacaggtcaatattcctgtac 274
            |||||||||||||||||| |||||||||||||||||||||
Sbjct: 3381 aaaggcgtagtcgatggataacaggtcaatattcctgtac 3420

---

>gb|AY033307.1| Uncultured Prochlorococcus sp. MB11E08 16S ribosomal RNA gene,
            partial sequence; tRNA-Ile and tRNA-Ala genes, complete
            sequence; and 23S ribosomal RNA gene, partial sequence
          Length = 3917

 Score =  174 bits (88), Expect = 1e-40
 Identities = 142/160 (88%)
 Strand = Plus / Plus

                                                                        
Query: 115  gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 174
            |||| ||||||||||||||||||| ||||||||| ||||||||||| ||||||||||| |
Sbjct: 3262 gaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgccccgaaacc 3321

                                                                        
Query: 175  ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 234
            | |||| ||||||||  ||| |||||| |||||||| |||| || ||||||   ||||||
Sbjct: 3322 ctaagggttcctccggcaggctcgtccgcggagggttagtctggacctaaggcgaggccg 3381

                                                    
Query: 235  aaaggcgtagtcgatggacaacaggtcaatattcctgtac 274
            |||||||||||||||||| |||||||||||||||||||||
Sbjct: 3382 aaaggcgtagtcgatggataacaggtcaatattcctgtac 3421

---

>gb|AY033297.1| Uncultured Synechococcus sp. MB11A04 16S ribosomal RNA gene, partial
            sequence; tRNA-Ile and tRNA-Ala genes, complete sequence;
            and 23S ribosomal RNA gene, partial sequence
          Length = 4141

 Score =  174 bits (88), Expect = 1e-40
 Identities = 142/160 (88%)
 Strand = Plus / Plus

                                                                        
Query: 115  gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 174
            |||| ||||||||||||||||||| ||||||||| ||||||||||| ||||||||||| |
Sbjct: 3486 gaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgccccgaaacc 3545

                                                                        
Query: 175  ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 234
            | |||| ||||||||  ||| |||||| |||||||| |||| || ||||||   ||||||
Sbjct: 3546 ctaagggttcctccggcaggctcgtccgcggagggttagtctggacctaaggcgaggccg 3605

                                                    
Query: 235  aaaggcgtagtcgatggacaacaggtcaatattcctgtac 274
            |||||||||||||||||| |||||||||||||||||||||
Sbjct: 3606 aaaggcgtagtcgatggataacaggtcaatattcctgtac 3645

---

>gb|DQ366719.1| Uncultured Prochlorococcus marinus clone ASNC729 genomic sequence
          Length = 38521

 Score =  174 bits (88), Expect = 1e-40
 Identities = 142/160 (88%)
 Strand = Plus / Minus

                                                                         
Query: 115   gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 174
             |||| ||||||||||||||||||| ||||||||| ||||||||||| ||||||||||| |
Sbjct: 19619 gaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgccccgaaacc 19560

                                                                         
Query: 175   ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 234
             | |||| ||||||||  ||| |||||| |||||||| |||| || ||||||   ||||||
Sbjct: 19559 ctaagggttcctccggcaggctcgtccgcggagggttagtctggacctaaggcgaggccg 19500

                                                     
Query: 235   aaaggcgtagtcgatggacaacaggtcaatattcctgtac 274
             |||||||||||||||||| |||||||||||||||||||||
Sbjct: 19499 aaaggcgtagtcgatggataacaggtcaatattcctgtac 19460

---

>gb|DQ366714.1| Uncultured Prochlorococcus marinus clone ASNC2150 genomic sequence
          Length = 37884

 Score =  174 bits (88), Expect = 1e-40
 Identities = 142/160 (88%)
 Strand = Plus / Minus

                                                                        
Query: 115  gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 174
            |||| ||||||||||||||||||| ||||||||| ||||||||||| ||||||||||| |
Sbjct: 1373 gaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgccccgaaacc 1314

                                                                        
Query: 175  ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 234
            | |||| ||||||||  ||| |||||| |||||||| |||| || ||||||   ||||||
Sbjct: 1313 ctaagggttcctccggcaggctcgtccgcggagggttagtctggacctaaggcgaggccg 1254

                                                    
Query: 235  aaaggcgtagtcgatggacaacaggtcaatattcctgtac 274
            |||||||||||||||||| |||||||||||||||||||||
Sbjct: 1253 aaaggcgtagtcgatggataacaggtcaatattcctgtac 1214

---

>emb|BX572090.1| Prochlorococcus marinus MED4 complete genome; segment 1/5
          Length = 349742

 Score =  174 bits (88), Expect = 1e-40
 Identities = 142/160 (88%)
 Strand = Plus / Plus

                                                                          
Query: 115    gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 174
              |||| ||||||||||||||||||| ||||||||| ||||||||||| ||||||||||| |
Sbjct: 316327 gaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgccccgaaacc 316386

                                                                          
Query: 175    ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 234
              | |||| ||||||||  ||| |||||| |||||||| |||| || ||||||   ||||||
Sbjct: 316387 ctaagggttcctccggcaggctcgtccgcggagggttagtctggacctaaggcgaggccg 316446

                                                      
Query: 235    aaaggcgtagtcgatggacaacaggtcaatattcctgtac 274
              |||||||||||||||||| |||||||||||||||||||||
Sbjct: 316447 aaaggcgtagtcgatggataacaggtcaatattcctgtac 316486

---

>gb|L42849.1|PEDCPRGOL Pedinomonas minor large subunit ribosomal RNA gene, partial sequence;
            chloroplast gene for chloroplast product
          Length = 2632

 Score =  174 bits (88), Expect = 1e-40
 Identities = 151/172 (87%)
 Strand = Plus / Plus

                                                                        
Query: 56   ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 115
            |||||||||||||||||||   ||| |||||| | ||| |||| || || ||||  ||||
Sbjct: 1208 ggtaggggagcgttccgccaacgagtgaagcatcagcgtaagccggtgtggacggggcgg 1267

                                                                        
Query: 116  aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 175
            ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  |
Sbjct: 1268 aagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaagtc 1327

                                                                
Query: 176  caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagat 227
             |||| ||||||| | ||||||||||| ||||||||||||||| ||||||||
Sbjct: 1328 taagggttcctccactaggttcgtccatggagggtgagtcaggtcctaagat 1379



 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                               
Query: 241  gtagtcgatggacaacaggtcaatattcctgtact 275
            |||||||||||| ||||||| ||||||||||||||
Sbjct: 1397 gtagtcgatggaaaacaggttaatattcctgtact 1431

---

>gb|AF393605.1| Pedinomonas minor small subunit ribosomal RNA (rrs) gene, complete
            sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc))
            genes, complete sequence; and large subunit ribosomal RNA
            (rrl) and 5S ribosomal RNA (rrf) genes, complete
            sequence; chloroplast genes for chloroplast products
          Length = 5057

 Score =  174 bits (88), Expect = 1e-40
 Identities = 151/172 (87%)
 Strand = Plus / Plus

                                                                        
Query: 56   ggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcgg 115
            |||||||||||||||||||   ||| |||||| | ||| |||| || || ||||  ||||
Sbjct: 3090 ggtaggggagcgttccgccaacgagtgaagcatcagcgtaagccggtgtggacggggcgg 3149

                                                                        
Query: 116  aagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaacc 175
            ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  |
Sbjct: 3150 aagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaagtc 3209

                                                                
Query: 176  caaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagat 227
             |||| ||||||| | ||||||||||| ||||||||||||||| ||||||||
Sbjct: 3210 taagggttcctccactaggttcgtccatggagggtgagtcaggtcctaagat 3261



 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                               
Query: 241  gtagtcgatggacaacaggtcaatattcctgtact 275
            |||||||||||| ||||||| ||||||||||||||
Sbjct: 3279 gtagtcgatggaaaacaggttaatattcctgtact 3313

---

>gb|L43540.1|DUNCPRRNL Dunaliella parva
          Length = 5685

 Score =  172 bits (87), Expect = 4e-40
 Identities = 144/163 (88%)
 Strand = Plus / Plus

                                                                        
Query: 113  cggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 172
            |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1778 cggaagtgagaatgttggcttgagtaacgaaaacattggtgagaatccaatgccccgaaa 1837

                                                                        
Query: 173  acccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggc 232
            |||   || ||||||| | ||||||||||| || |||| ||||||| ||||||   ||||
Sbjct: 1838 accgttgggttcctccactaggttcgtccatggggggttagtcaggtcctaaggctaggc 1897

                                                       
Query: 233  cgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 275
            |||||||||| ||||||||  ||||||| ||||||||||||||
Sbjct: 1898 cgaaaggcgtcgtcgatggcaaacaggttaatattcctgtact 1940



 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 53   atcggtaggggagcgttccg 72
            ||||||||||||||||||||
Sbjct: 1718 atcggtaggggagcgttccg 1737

---

>emb|X61179.1|CHPLIB P.littoralis chloroplast DNA for 23S rRNA (partial) and 5S rRNA
          Length = 2957

 Score =  172 bits (87), Expect = 4e-40
 Identities = 150/171 (87%)
 Strand = Plus / Plus

                                                                        
Query: 106  gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 165
            |||||||| |||| ||||||||||||||||||| ||||||||| ||||||||||| ||||
Sbjct: 1146 gacgaagcagaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatccgatgc 1205

                                                                        
Query: 166  cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 225
            || ||||||| ||||||||||||| |||| |||||| |||||||| ||||||| ||||||
Sbjct: 1206 cctgaaaacctaaggtttcctccggaaggctcgtccgcggagggtaagtcaggacctaag 1265

                                                               
Query: 226  atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtacta 276
               |||| |||| |||||||||||||||||  ||| ||||||||| |||||
Sbjct: 1266 gcgaggctgaaaagcgtagtcgatggacaatgggttaatattcctatacta 1316

---

>gb|AY673996.1| Gracilaria tenuistipitata var. liui chloroplast, complete genome
          Length = 183883

 Score =  170 bits (86), Expect = 2e-39
 Identities = 143/162 (88%)
 Strand = Plus / Minus

                                                                         
Query: 115   gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 174
             |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 26572 gaagtgagaatgtcggcttgagtagcgaaaacattggtgagaatccaatgccccgaaaac 26513

                                                                         
Query: 175   ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 234
             | ||||||||||  | |||||||||||||| ||||| ||||||| ||||||   |||  |
Sbjct: 26512 ctaaggtttcctttggaaggttcgtccacgaagggtaagtcaggtcctaaggcaaggttg 26453

                                                       
Query: 235   aaaggcgtagtcgatggacaacaggtcaatattcctgtacta 276
             ||   ||||||||||||| ||||||| |||||||||||||||
Sbjct: 26452 aacaacgtagtcgatggataacaggttaatattcctgtacta 26411



 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                    
Query: 6     atgaacggggctaagcgatctgccgaagctgtgggatgt 44
             |||||||||||||||  || |||||||||||||||||||
Sbjct: 26679 atgaacggggctaagtaatttgccgaagctgtgggatgt 26641

---

>gb|AY584526.1| Leptolyngbya boryana PCC 6306 23S ribosomal RNA gene, partial
            sequence
          Length = 2444

 Score =  170 bits (86), Expect = 2e-39
 Identities = 149/170 (87%)
 Strand = Plus / Plus

                                                                        
Query: 106  gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 165
            |||||||| |||| ||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 860  gacgaagcagaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 919

                                                                        
Query: 166  cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 225
            || |||| || |||| |||||||| |||| |||||| ||||||||||||| |||||||||
Sbjct: 920  cctgaaatcctaagggttcctccggaaggctcgtccgcggagggtgagtcggggcctaag 979

                                                              
Query: 226  atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 275
               ||| |||||| ||||||||||||||||| ||| || ||||| |||||
Sbjct: 980  gcgaggtcgaaagacgtagtcgatggacaactggtgaagattccagtact 1029

---

>gb|AY584520.1| Leptolyngbya sp. PCC 7410 23S ribosomal RNA gene, partial sequence
          Length = 2441

 Score =  170 bits (86), Expect = 2e-39
 Identities = 149/170 (87%)
 Strand = Plus / Plus

                                                                        
Query: 106  gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 165
            |||||||| |||| ||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 858  gacgaagcagaagtgagaatgtcggcttgagtagcgcaaacattggtgagaatccaatgc 917

                                                                        
Query: 166  cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 225
            || |||| || |||| |||||||| |||| |||||| ||||||||||||| |||||||||
Sbjct: 918  cctgaaatcctaagggttcctccggaaggctcgtccgcggagggtgagtcggggcctaag 977

                                                              
Query: 226  atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 275
               ||| |||||| ||||||||||||||||| ||| || ||||| |||||
Sbjct: 978  gcgaggtcgaaagacgtagtcgatggacaactggtgaagattccagtact 1027

---

>gb|AY008341.1| Trichosarcina mucosa large subunit ribosomal RNA (rrnL) gene, partial
            sequence; and rrnL and putative site-specific DNA
            endonuclease (rrnL) genes, complete cds; chloroplast
            genes for chloroplast products
          Length = 4502

 Score =  170 bits (86), Expect = 2e-39
 Identities = 149/170 (87%)
 Strand = Plus / Plus

                                                                        
Query: 106  gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 165
            ||||| || |||| |||||||||||||||||||||| |||||||||||||||||||||| 
Sbjct: 1281 gacgacgcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgg 1340

                                                                        
Query: 166  cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 225
            |||||||||| |||| |||||   ||||| ||||||| | ||||| ||||||| ||||||
Sbjct: 1341 cccgaaaacctaagggttcctttacaaggctcgtccatgaagggttagtcaggtcctaag 1400

                                                              
Query: 226  atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 275
               ||| |||||||||||||||||||| |||||||||| |||||||||||
Sbjct: 1401 gcgaggtcgaaaggcgtagtcgatggaaaacaggtcaacattcctgtact 1450



 Score = 50.1 bits (25), Expect = 0.004
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                 
Query: 6    atgaacggggctaagcgatctgccgaagctgtgggat 42
            ||||||||| |||||||  ||||||||||||||||||
Sbjct: 1177 atgaacgggactaagcggcctgccgaagctgtgggat 1213

---

>gb|L42837.1|CMKCPRGOL Chamaetrichon capsulatum large subunit ribosomal RNA (rrnL) gene,
            partial sequence; chloroplast gene for chloroplast
            product
          Length = 2610

 Score =  170 bits (86), Expect = 2e-39
 Identities = 149/170 (87%)
 Strand = Plus / Plus

                                                                        
Query: 106  gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 165
            ||||| ||||||| |||||||||||||||||||||| |||||||||||||||||||||| 
Sbjct: 1246 gacgacgcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgt 1305

                                                                        
Query: 166  cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 225
            |||||||||| |||| |||||   ||||| ||||||| | ||||| ||||||| ||||||
Sbjct: 1306 cccgaaaacctaagggttcctttacaaggctcgtccatgaagggttagtcaggtcctaag 1365

                                                              
Query: 226  atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 275
               ||| |||||||||||||||||||  ||||||| ||||||||||||||
Sbjct: 1366 gcgaggtcgaaaggcgtagtcgatggcaaacaggttaatattcctgtact 1415



 Score = 50.1 bits (25), Expect = 0.004
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                 
Query: 6    atgaacggggctaagcgatctgccgaagctgtgggat 42
            ||||||||| |||||||  ||||||||||||||||||
Sbjct: 1142 atgaacgggactaagcggcctgccgaagctgtgggat 1178

---

>gb|L42852.1|PDFCPRGOL Pseudoscourfieldia marina large subunit ribosomal RNA (rrnL) gene,
            partial sequence; chloroplast gene for chloroplast
            product
          Length = 2571

 Score =  170 bits (86), Expect = 2e-39
 Identities = 149/170 (87%)
 Strand = Plus / Plus

                                                                        
Query: 106  gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 165
            ||||| ||||||| |||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1240 gacgaggcggaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgc 1299

                                                                        
Query: 166  cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 225
             ||||||||| |||| ||||| |   ||| ||||||| ||||||||||||||| ||||||
Sbjct: 1300 tccgaaaacctaagggttccttcagtaggctcgtccatggagggtgagtcaggacctaag 1359

                                                              
Query: 226  atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtact 275
               |||||||||||||||  |||||| |||||||| || |||||||||||
Sbjct: 1360 gagaggccgaaaggcgtatccgatggccaacaggttaacattcctgtact 1409



 Score = 50.1 bits (25), Expect = 0.004
 Identities = 58/68 (85%), Gaps = 2/68 (2%)
 Strand = Plus / Plus

                                                                        
Query: 6    atgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtaggggag 65
            ||||||||| |||||||  |||||||||||||| ||||   ||   ||||||||||||||
Sbjct: 1142 atgaacgggactaagcggcctgccgaagctgtgagatggtgaat--catcggtaggggag 1199

                    
Query: 66   cgttccgc 73
            ||||||||
Sbjct: 1200 cgttccgc 1207

---

>gb|AY330887.1| Cynomorium coccineum clone Cyno_19 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2689

 Score =  168 bits (85), Expect = 6e-39
 Identities = 193/229 (84%)
 Strand = Plus / Plus

                                                                        
Query: 52   catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 111
            |||||| |||||||||||| |||||| | ||||||| | ||   ||  | ||| || |||
Sbjct: 1180 catcggcaggggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaa 1239

                                                                        
Query: 112  gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 171
            || |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1240 gcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaa 1299

                                                                        
Query: 172  aacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcagg 231
            |||| |||| ||||| | |||||||| |||||| ||||||||||||| | ||||||||  
Sbjct: 1300 aacctaaggattccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcata 1359

                                                             
Query: 232  ccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccc 280
            | ||||||  |||  ||||||||| || | ||||||| |||||||||||
Sbjct: 1360 ctgaaaggtttagctgatggacaatagattaatattcttgtactacccc 1408

---

>gb|AY330886.1| Cynomorium coccineum clone Cyno_18 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2689

 Score =  168 bits (85), Expect = 6e-39
 Identities = 193/229 (84%)
 Strand = Plus / Plus

                                                                        
Query: 52   catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 111
            |||||| |||||||||||| |||||| | ||||||| | ||   ||  | ||| || |||
Sbjct: 1179 catcggcaggggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaa 1238

                                                                        
Query: 112  gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 171
            || |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1239 gcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaa 1298

                                                                        
Query: 172  aacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcagg 231
            |||| |||| ||||| | |||||||| |||||| ||||||||||||| | ||||||||  
Sbjct: 1299 aacctaaggattccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcata 1358

                                                             
Query: 232  ccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccc 280
            | ||||||  |||  ||||||||| || | ||||||| |||||||||||
Sbjct: 1359 ctgaaaggtttagctgatggacaatagattaatattcttgtactacccc 1407

---

>gb|AY330884.1| Cynomorium coccineum clone Cyno_15 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2690

 Score =  168 bits (85), Expect = 6e-39
 Identities = 193/229 (84%)
 Strand = Plus / Plus

                                                                        
Query: 52   catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 111
            |||||| |||||||||||| |||||| | ||||||| | ||   ||  | ||| || |||
Sbjct: 1180 catcggcaggggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaa 1239

                                                                        
Query: 112  gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 171
            || |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1240 gcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaa 1299

                                                                        
Query: 172  aacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcagg 231
            |||| |||| ||||| | |||||||| |||||| ||||||||||||| | ||||||||  
Sbjct: 1300 aacctaaggattccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcata 1359

                                                             
Query: 232  ccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccc 280
            | ||||||  |||  ||||||||| || | ||||||| |||||||||||
Sbjct: 1360 ctgaaaggtttagctgatggacaatagattaatattcttgtactacccc 1408

---

>gb|AY330883.1| Cynomorium coccineum clone Cyno_14 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2690

 Score =  168 bits (85), Expect = 6e-39
 Identities = 193/229 (84%)
 Strand = Plus / Plus

                                                                        
Query: 52   catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 111
            |||||| |||||||||||| |||||| | ||||||| | ||   ||  | ||| || |||
Sbjct: 1180 catcggcaggggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaa 1239

                                                                        
Query: 112  gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 171
            || |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1240 gcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaa 1299

                                                                        
Query: 172  aacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcagg 231
            |||| |||| ||||| | |||||||| |||||| ||||||||||||| | ||||||||  
Sbjct: 1300 aacctaaggattccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcata 1359

                                                             
Query: 232  ccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccc 280
            | ||||||  |||  ||||||||| || | ||||||| |||||||||||
Sbjct: 1360 ctgaaaggtttagctgatggacaatagattaatattcttgtactacccc 1408

---

>gb|AY330882.1| Cynomorium coccineum clone Cyno_13 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2690

 Score =  168 bits (85), Expect = 6e-39
 Identities = 193/229 (84%)
 Strand = Plus / Plus

                                                                        
Query: 52   catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 111
            |||||| |||||||||||| |||||| | ||||||| | ||   ||  | ||| || |||
Sbjct: 1180 catcggcaggggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaa 1239

                                                                        
Query: 112  gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 171
            || |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1240 gcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaa 1299

                                                                        
Query: 172  aacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcagg 231
            |||| |||| ||||| | |||||||| |||||| ||||||||||||| | ||||||||  
Sbjct: 1300 aacctaaggattccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcata 1359

                                                             
Query: 232  ccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccc 280
            | ||||||  |||  ||||||||| || | ||||||| |||||||||||
Sbjct: 1360 ctgaaaggtttagctgatggacaatagattaatattcttgtactacccc 1408

---

>gb|AY330881.1| Cynomorium coccineum clone Cyno_12 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2690

 Score =  168 bits (85), Expect = 6e-39
 Identities = 193/229 (84%)
 Strand = Plus / Plus

                                                                        
Query: 52   catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 111
            |||||| |||||||||||| |||||| | ||||||| | ||   ||  | ||| || |||
Sbjct: 1180 catcggcaggggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaa 1239

                                                                        
Query: 112  gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 171
            || |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1240 gcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaa 1299

                                                                        
Query: 172  aacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcagg 231
            |||| |||| ||||| | |||||||| |||||| ||||||||||||| | ||||||||  
Sbjct: 1300 aacctaaggattccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcata 1359

                                                             
Query: 232  ccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccc 280
            | ||||||  |||  ||||||||| || | ||||||| |||||||||||
Sbjct: 1360 ctgaaaggtttagctgatggacaatagattaatattcttgtactacccc 1408

---

>gb|AY330880.1| Cynomorium coccineum clone Cyno_11 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2690

 Score =  168 bits (85), Expect = 6e-39
 Identities = 193/229 (84%)
 Strand = Plus / Plus

                                                                        
Query: 52   catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 111
            |||||| |||||||||||| |||||| | ||||||| | ||   ||  | ||| || |||
Sbjct: 1180 catcggcaggggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaa 1239

                                                                        
Query: 112  gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 171
            || |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1240 gcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaa 1299

                                                                        
Query: 172  aacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcagg 231
            |||| |||| ||||| | |||||||| |||||| ||||||||||||| | ||||||||  
Sbjct: 1300 aacctaaggattccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcata 1359

                                                             
Query: 232  ccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccc 280
            | ||||||  |||  ||||||||| || | ||||||| |||||||||||
Sbjct: 1360 ctgaaaggtttagctgatggacaatagattaatattcttgtactacccc 1408

---

>gb|AY330879.1| Cynomorium coccineum clone Cyno_10 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2696

 Score =  168 bits (85), Expect = 6e-39
 Identities = 193/229 (84%)
 Strand = Plus / Plus

                                                                        
Query: 52   catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 111
            |||||| |||||||||||| |||||| | ||||||| | ||   ||  | ||| || |||
Sbjct: 1179 catcggcaggggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaa 1238

                                                                        
Query: 112  gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 171
            || |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1239 gcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaa 1298

                                                                        
Query: 172  aacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcagg 231
            |||| |||| ||||| | |||||||| |||||| ||||||||||||| | ||||||||  
Sbjct: 1299 aacctaaggattccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcata 1358

                                                             
Query: 232  ccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccc 280
            | ||||||  |||  ||||||||| || | ||||||| |||||||||||
Sbjct: 1359 ctgaaaggtttagctgatggacaatagattaatattcttgtactacccc 1407

---

>gb|AY330878.1| Cynomorium coccineum clone Cyno_9 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2690

 Score =  168 bits (85), Expect = 6e-39
 Identities = 193/229 (84%)
 Strand = Plus / Plus

                                                                        
Query: 52   catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 111
            |||||| |||||||||||| |||||| | ||||||| | ||   ||  | ||| || |||
Sbjct: 1180 catcggcaggggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaa 1239

                                                                        
Query: 112  gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 171
            || |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1240 gcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaa 1299

                                                                        
Query: 172  aacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcagg 231
            |||| |||| ||||| | |||||||| |||||| ||||||||||||| | ||||||||  
Sbjct: 1300 aacctaaggattccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcata 1359

                                                             
Query: 232  ccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccc 280
            | ||||||  |||  ||||||||| || | ||||||| |||||||||||
Sbjct: 1360 ctgaaaggtttagctgatggacaatagattaatattcttgtactacccc 1408

---

>gb|AY330877.1| Cynomorium coccineum clone Cyno_8 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2690

 Score =  168 bits (85), Expect = 6e-39
 Identities = 193/229 (84%)
 Strand = Plus / Plus

                                                                        
Query: 52   catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 111
            |||||| |||||||||||| |||||| | ||||||| | ||   ||  | ||| || |||
Sbjct: 1180 catcggcaggggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaa 1239

                                                                        
Query: 112  gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 171
            || |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1240 gcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaa 1299

                                                                        
Query: 172  aacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcagg 231
            |||| |||| ||||| | |||||||| |||||| ||||||||||||| | ||||||||  
Sbjct: 1300 aacctaaggattccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcata 1359

                                                             
Query: 232  ccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccc 280
            | ||||||  |||  ||||||||| || | ||||||| |||||||||||
Sbjct: 1360 ctgaaaggtttagctgatggacaatagattaatattcttgtactacccc 1408

---

>gb|AY330876.1| Cynomorium coccineum clone Cyno_7 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2689

 Score =  168 bits (85), Expect = 6e-39
 Identities = 193/229 (84%)
 Strand = Plus / Plus

                                                                        
Query: 52   catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 111
            |||||| |||||||||||| |||||| | ||||||| | ||   ||  | ||| || |||
Sbjct: 1179 catcggcaggggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaa 1238

                                                                        
Query: 112  gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 171
            || |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1239 gcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaa 1298

                                                                        
Query: 172  aacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcagg 231
            |||| |||| ||||| | |||||||| |||||| ||||||||||||| | ||||||||  
Sbjct: 1299 aacctaaggattccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcata 1358

                                                             
Query: 232  ccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccc 280
            | ||||||  |||  ||||||||| || | ||||||| |||||||||||
Sbjct: 1359 ctgaaaggtttagctgatggacaatagattaatattcttgtactacccc 1407

---

>gb|AY330875.1| Cynomorium coccineum clone Cyno_6 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2690

 Score =  168 bits (85), Expect = 6e-39
 Identities = 193/229 (84%)
 Strand = Plus / Plus

                                                                        
Query: 52   catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 111
            |||||| |||||||||||| |||||| | ||||||| | ||   ||  | ||| || |||
Sbjct: 1180 catcggcaggggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaa 1239

                                                                        
Query: 112  gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 171
            || || | |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1240 gcagaggtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaa 1299

                                                                        
Query: 172  aacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcagg 231
            |||| |||| ||||| | |||||||| |||||| ||||||||||||| | ||||||||  
Sbjct: 1300 aacctaaggattccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcata 1359

                                                             
Query: 232  ccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccc 280
            | ||||||  |||  ||||||||| |||| ||||||| |||||||||||
Sbjct: 1360 ctgaaaggtttagctgatggacaataggttaatattcttgtactacccc 1408

---

>gb|AY330873.1| Cynomorium coccineum clone Cyno_4 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2690

 Score =  168 bits (85), Expect = 6e-39
 Identities = 193/229 (84%)
 Strand = Plus / Plus

                                                                        
Query: 52   catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 111
            |||||| |||||||||||| |||||| | ||||||| | ||   ||  | ||| || |||
Sbjct: 1180 catcggcaggggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaa 1239

                                                                        
Query: 112  gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 171
            || |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1240 gcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaa 1299

                                                                        
Query: 172  aacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcagg 231
            |||| |||| ||||| | |||||||| |||||| ||||||||||||| | ||||||||  
Sbjct: 1300 aacctaaggattccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcata 1359

                                                             
Query: 232  ccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccc 280
            | ||||||  |||  ||||||||| || | ||||||| |||||||||||
Sbjct: 1360 ctgaaaggtttagctgatggacaatagattaatattcttgtactacccc 1408

---

>gb|AY330872.1| Cynomorium coccineum clone Cyno_3 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2690

 Score =  168 bits (85), Expect = 6e-39
 Identities = 193/229 (84%)
 Strand = Plus / Plus

                                                                        
Query: 52   catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 111
            |||||| |||||||||||| |||||| | ||||||| | ||   ||  | ||| || |||
Sbjct: 1180 catcggcaggggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaa 1239

                                                                        
Query: 112  gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 171
            || |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1240 gcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaa 1299

                                                                        
Query: 172  aacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcagg 231
            |||| |||| ||||| | |||||||| |||||| ||||||||||||| | ||||||||  
Sbjct: 1300 aacctaaggattccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcata 1359

                                                             
Query: 232  ccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccc 280
            | ||||||  |||  ||||||||| || | ||||||| |||||||||||
Sbjct: 1360 ctgaaaggtttagctgatggacaatagattaatattcttgtactacccc 1408

---

>gb|AY330871.1| Cynomorium coccineum clone Cyno_2 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2689

 Score =  168 bits (85), Expect = 6e-39
 Identities = 193/229 (84%)
 Strand = Plus / Plus

                                                                        
Query: 52   catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 111
            |||||| |||||||||||| |||||| | ||||||| | ||   ||  | ||| || |||
Sbjct: 1180 catcggcaggggagcgttctgccttataaggaagcacctgcacgagaagtggtggatgaa 1239

                                                                        
Query: 112  gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 171
            || |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1240 gcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaa 1299

                                                                        
Query: 172  aacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcagg 231
            |||| |||| ||||| | |||||||| |||||| ||||||||||||| | ||||||||  
Sbjct: 1300 aacctaaggattccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcata 1359

                                                             
Query: 232  ccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccc 280
            | ||||||  |||  ||||||||| || | ||||||| |||||||||||
Sbjct: 1360 ctgaaaggtttagctgatggacaatagattaatattcttgtactacccc 1408

---

>gb|AY330870.1| Cynomorium coccineum clone Cyno_1 23S large subunit ribosomal RNA
            gene, partial sequence; chloroplast gene for chloroplast
            product
          Length = 2690

 Score =  168 bits (85), Expect = 6e-39
 Identities = 193/229 (84%)
 Strand = Plus / Plus

                                                                        
Query: 52   catcggtaggggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaa 111
            |||||| |||||||||||| |||||| | ||||||| | ||   ||  | ||| || |||
Sbjct: 1180 catcggcaggggagcgttctgccttataaggaagcacctgcccgagaagtggtggatgaa 1239

                                                                        
Query: 112  gcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaa 171
            || |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1240 gcagaagtgagaatgtcggcttgagtaacgcaaacattggtgagaatccaatgccccgaa 1299

                                                                        
Query: 172  aacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcagg 231
            |||| |||| ||||| | |||||||| |||||| ||||||||||||| | ||||||||  
Sbjct: 1300 aacctaaggattccttcacaaggttcatccacgtagggtgagtcaggtcgtaagatcata 1359

                                                             
Query: 232  ccgaaaggcgtagtcgatggacaacaggtcaatattcctgtactacccc 280
            | ||||||  |||  ||||||||| || | ||||||| |||||||||||
Sbjct: 1360 ctgaaaggtttagctgatggacaatagattaatattcttgtactacccc 1408

---

>gb|AY741371.1| Emiliania huxleyi strain CCMP 373 chloroplast, complete genome
          Length = 105309

 Score =  168 bits (85), Expect = 6e-39
 Identities = 143/161 (88%), Gaps = 1/161 (0%)
 Strand = Plus / Minus

                                                                         
Query: 115   gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 174
             |||| ||||||||  ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 17797 gaagtgagaatgttagcttgagtagcgaaaacattggtgagaatccaatgccccgaaaac 17738

                                                                         
Query: 175   ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 234
             |||||| |||||||| |||| |||||| |||||||||||||||| |||||| | ||| | 
Sbjct: 17737 ccaagggttcctccggaaggctcgtccgcggagggtgagtcaggtcctaaggtgagg-ct 17679

                                                      
Query: 235   aaaggcgtagtcgatggacaacaggtcaatattcctgtact 275
             ||  ||||| |||||||| ||||||| ||||||||||||||
Sbjct: 17678 aatagcgtaatcgatggataacaggttaatattcctgtact 17638



 Score =  168 bits (85), Expect = 6e-39
 Identities = 143/161 (88%), Gaps = 1/161 (0%)
 Strand = Plus / Plus

                                                                        
Query: 115  gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 174
            |||| ||||||||  ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 3069 gaagtgagaatgttagcttgagtagcgaaaacattggtgagaatccaatgccccgaaaac 3128

                                                                        
Query: 175  ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 234
            |||||| |||||||| |||| |||||| |||||||||||||||| |||||| | ||| | 
Sbjct: 3129 ccaagggttcctccggaaggctcgtccgcggagggtgagtcaggtcctaaggtgagg-ct 3187

                                                     
Query: 235  aaaggcgtagtcgatggacaacaggtcaatattcctgtact 275
            ||  ||||| |||||||| ||||||| ||||||||||||||
Sbjct: 3188 aatagcgtaatcgatggataacaggttaatattcctgtact 3228

---

>gb|L43538.1|CRECPRRNLA Chlamydomonas peterfii chloroplast large subunit ribosomal RNA (rrnL)
            gene
          Length = 3498

 Score =  168 bits (85), Expect = 6e-39
 Identities = 148/169 (87%)
 Strand = Plus / Plus

                                                                        
Query: 106  gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 165
            |||||| | |||| |||||||| |||||||||||||||||||| ||||||||||| ||||
Sbjct: 1312 gacgaaccagaagtgagaatgttggcttgagtaacgaaaacatcggtgagaatccgatgc 1371

                                                                        
Query: 166  cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 225
            |||||||||| |||| ||||||| | ||| ||||||| || |||| ||||||| ||||||
Sbjct: 1372 cccgaaaacctaagggttcctccactaggctcgtccatggggggttagtcaggacctaag 1431

                                                             
Query: 226  atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 274
            | |||||| || ||||| ||||||||| ||||||| |||||||||||||
Sbjct: 1432 accaggccaaatggcgtcgtcgatggaaaacaggttaatattcctgtac 1480

---

>gb|AF355760.1| Rhizophora mucronata 23S ribosomal RNA gene, complete sequence;
            chloroplast gene for chloroplast product
          Length = 2902

 Score =  168 bits (85), Expect = 6e-39
 Identities = 197/228 (86%), Gaps = 6/228 (2%)
 Strand = Plus / Plus

                                                                        
Query: 2    gaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtagg 61
            ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||
Sbjct: 1173 gaagatgaacggggctaagcgatctgccgaagctgtgggatgtaaaaatgcatccgtagg 1232

                                                                        
Query: 62   ggagcgttccgccttagagggaagcaaccgcgaaagcgggggtcgacgaagcggaagcga 121
            |||||||||| ||||| ||||||||| ||||   |||  |||| |||||| | | | | |
Sbjct: 1233 ggagcgttcccccttatagggaagcacccgccccagcaagggtggacgaaaccg-atcta 1291

                                                                        
Query: 122  gaatgtcggcttgagtaacgaaaaca-ttggtgagaatccaatgccccgaaaacccaagg 180
             ||||||  |||||||||   ||||| ||||||||||||||||||||| |||||| ||||
Sbjct: 1292 aaatgtccccttgagtaaaccaaacatttggtgagaatccaatgcccccaaaacctaagg 1351

                                                            
Query: 181  tttcctccgc-aaggttcgtccacgga--gggtgagtc-agggcctaa 224
             ||||||| | ||||||||||||||||  ||||||||| |||||||||
Sbjct: 1352 gttcctccccaaaggttcgtccacggatggggtgagtcaagggcctaa 1399

---

>emb|X68887.1|CHCPRRNL1 Chloroplast Chlamydomonas peterfii rrnL gene, exon 1
          Length = 2668

 Score =  168 bits (85), Expect = 6e-39
 Identities = 148/169 (87%)
 Strand = Plus / Plus

                                                                        
Query: 106  gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 165
            |||||| | |||| |||||||| |||||||||||||||||||| ||||||||||| ||||
Sbjct: 1312 gacgaaccagaagtgagaatgttggcttgagtaacgaaaacatcggtgagaatccgatgc 1371

                                                                        
Query: 166  cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 225
            |||||||||| |||| ||||||| | ||| ||||||| || |||| ||||||| ||||||
Sbjct: 1372 cccgaaaacctaagggttcctccactaggctcgtccatggggggttagtcaggacctaag 1431

                                                             
Query: 226  atcaggccgaaaggcgtagtcgatggacaacaggtcaatattcctgtac 274
            | |||||| || ||||| ||||||||| ||||||| |||||||||||||
Sbjct: 1432 accaggccaaatggcgtcgtcgatggaaaacaggttaatattcctgtac 1480

---

>emb|BX572100.1| Prochlorococcus marinus MIT9313 complete genome; segment 6/7
          Length = 348071

 Score =  167 bits (84), Expect = 2e-38
 Identities = 141/160 (88%)
 Strand = Plus / Minus

                                                                        
Query: 115  gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 174
            |||| ||||||||||||||||||| ||||||||| ||||||||||| ||||||||||| |
Sbjct: 5359 gaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgccccgaaacc 5300

                                                                        
Query: 175  ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 234
            | |||| ||||||||  ||| |||||| |||||||| |||| || ||||||   ||||||
Sbjct: 5299 ctaagggttcctccggcaggctcgtccgcggagggttagtctggacctaaggcgaggccg 5240

                                                    
Query: 235  aaaggcgtagtcgatggacaacaggtcaatattcctgtac 274
            |||||||||||||||||| |||||||||| ||||||||||
Sbjct: 5239 aaaggcgtagtcgatggataacaggtcaacattcctgtac 5200

---

>emb|BX572095.1| Prochlorococcus marinus MIT9313 complete genome; segment 1/7
          Length = 349391

 Score =  167 bits (84), Expect = 2e-38
 Identities = 141/160 (88%)
 Strand = Plus / Plus

                                                                          
Query: 115    gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 174
              |||| ||||||||||||||||||| ||||||||| ||||||||||| ||||||||||| |
Sbjct: 212413 gaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgccccgaaacc 212472

                                                                          
Query: 175    ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 234
              | |||| ||||||||  ||| |||||| |||||||| |||| || ||||||   ||||||
Sbjct: 212473 ctaagggttcctccggcaggctcgtccgcggagggttagtctggacctaaggcgaggccg 212532

                                                      
Query: 235    aaaggcgtagtcgatggacaacaggtcaatattcctgtac 274
              |||||||||||||||||| |||||||||| ||||||||||
Sbjct: 212533 aaaggcgtagtcgatggataacaggtcaacattcctgtac 212572

---

>gb|L43353.1|CRECPRRNLD Chlamydomonas geitleri chloroplast large subunit ribosomal RNA (rrnL)
            gene
          Length = 4406

 Score =  167 bits (84), Expect = 2e-38
 Identities = 111/120 (92%)
 Strand = Plus / Plus

                                                                        
Query: 106  gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 165
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1271 gacgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 1330

                                                                        
Query: 166  cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 225
            |||||||||| |||| ||||||| | ||||||||||| || |||| ||||||| ||||||
Sbjct: 1331 cccgaaaacctaagggttcctccactaggttcgtccatggggggttagtcaggtcctaag 1390



 Score = 40.1 bits (20), Expect = 3.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 244  gtcgatggacaacaggtcaatattcctgtact 275
            ||||||||  ||||||| ||||||||||||||
Sbjct: 1413 gtcgatgggaaacaggttaatattcctgtact 1444

---

>dbj|AK059219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-C12, full
           insert sequence
          Length = 1634

 Score =  167 bits (84), Expect = 2e-38
 Identities = 84/84 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 tgaagatgaacggggctaagcgatctgccgaagctgtgggatgtcaaaatgcatcggtag 835

                                   
Query: 61  gggagcgttccgccttagagggaa 84
           ||||||||||||||||||||||||
Sbjct: 836 gggagcgttccgccttagagggaa 859

---

>emb|X68891.1|CHCGRRNL1 Chloroplast Chlamydomonas geitleri rrnL gene, exon 1
          Length = 1964

 Score =  167 bits (84), Expect = 2e-38
 Identities = 111/120 (92%)
 Strand = Plus / Plus

                                                                        
Query: 106  gacgaagcggaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 165
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1271 gacgaagcggaagtgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgc 1330

                                                                        
Query: 166  cccgaaaacccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaag 225
            |||||||||| |||| ||||||| | ||||||||||| || |||| ||||||| ||||||
Sbjct: 1331 cccgaaaacctaagggttcctccactaggttcgtccatggggggttagtcaggtcctaag 1390



 Score = 40.1 bits (20), Expect = 3.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 244  gtcgatggacaacaggtcaatattcctgtact 275
            ||||||||  ||||||| ||||||||||||||
Sbjct: 1413 gtcgatgggaaacaggttaatattcctgtact 1444

---

>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome
          Length = 1751080

 Score =  167 bits (84), Expect = 2e-38
 Identities = 141/160 (88%)
 Strand = Plus / Plus

                                                                          
Query: 115    gaagcgagaatgtcggcttgagtaacgaaaacattggtgagaatccaatgccccgaaaac 174
              |||| ||||||||||||||||||| ||||||||| ||||||||||| ||||||||||| |
Sbjct: 356714 gaagtgagaatgtcggcttgagtagcgaaaacatgggtgagaatcccatgccccgaaacc 356773

                                                                          
Query: 175    ccaaggtttcctccgcaaggttcgtccacggagggtgagtcagggcctaagatcaggccg 234
              | |||| ||||||||  ||| |||||| |||||||| |||| || ||||||   ||||||
Sbjct: 356774 ctaagggttcctccggcaggctcgtccgcggagggttagtctggacctaaggcgaggccg 356833

                                                      
Query: 235    aaaggcgtagtcgatggacaacaggtcaatattcctgtac 274
              |||||||||||||||||| |||||||||| ||||||||||
Sbjct: 356834 aaaggcgtagtcgatggataacaggtcaacattcctgtac 356873


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,363,362
Number of Sequences: 3902068
Number of extensions: 1363362
Number of successful extensions: 24380
Number of sequences better than 10.0: 1531
Number of HSP's better than 10.0 without gapping: 1528
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 19244
Number of HSP's gapped (non-prelim): 4989
length of query: 287
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 265
effective length of database: 17,147,199,772
effective search space: 4544007939580
effective search space used: 4544007939580
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---