ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd24e13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK073097.1| Oryza sativa (japonica cultivar-group) cDNA clon... 343 4e-91
2gb|AY224539.1| Oryza sativa (japonica cultivar-group) isolate 23... 291 1e-75
3dbj|AK063852.1| Oryza sativa (japonica cultivar-group) cDNA clon... 170 3e-39
4dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 109 1e-20
5dbj|AP005570.3| Oryza sativa (japonica cultivar-group) genomic D... 109 1e-20
6gb|AC137830.6| Medicago truncatula clone mth2-33g10, complete se... 48 0.035
7ref|NM_006283.1| Homo sapiens transforming, acidic coiled-coil c... 42 2.1
8gb|AY072876.2| Homo sapiens transforming, acidic coiled-coil con... 42 2.1
9gb|BC041391.1| Homo sapiens transforming, acidic coiled-coil con... 42 2.1
10emb|BX647696.1|HSM807842 Homo sapiens mRNA; cDNA DKFZp686K18126 ... 42 2.1
11gb|AF049910.1|AF049910 Homo sapiens TACC1 (TACC1) mRNA, complete... 42 2.1
12gb|AC067817.10| Homo sapiens chromosome 8, clone RP11-723D22, co... 42 2.1
13gb|AY618313.1| Chelon labrosus semaphorin 6A1 gene, partial cds 40 8.5
14gb|AC116896.7| Mus musculus chromosome 8, clone RP24-531D19, com... 40 8.5
15ref|NM_128184.1| Arabidopsis thaliana unknown protein AT2G26270 ... 40 8.5
16ref|NM_121314.3| Arabidopsis thaliana G6PD2; glucose-6-phosphate... 40 8.5
17ref|XM_478440.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.5
18gb|AC124350.4| Mus musculus BAC clone RP24-466K21 from chromosom... 40 8.5
19gb|AC091170.15| Homo sapiens chromosome 18, clone RP11-879D5, co... 40 8.5
20gb|AC119419.9| Medicago truncatula clone mth2-6b12, complete seq... 40 8.5
21emb|AL354861.11| Human DNA sequence from clone RP11-180I4 on chr... 40 8.5
22gb|AC128680.6| Homo sapiens 3 BAC RP13-551P9 (Roswell Park Cance... 40 8.5
23gb|AY051318.3| Penaeus semisulcatus vitellogenin VTG mRNA, compl... 40 8.5
24emb|X84229.1|ATG6PDHE5 A.thaliana mRNA for glucose-6-phosphate d... 40 8.5
25emb|BX321862.1| Nitrosomonas europaea ATCC 19718, complete genom... 40 8.5
26gb|AC113209.4| Homo sapiens chromosome 8, clone RP11-1002K11, co... 40 8.5
27gb|AC004484.3| Arabidopsis thaliana chromosome 2 clone T1D16 map... 40 8.5
28gb|AC012413.10| Homo sapiens chromosome 8, clone RP11-401H2, com... 40 8.5
29gb|AY499620.2| Fenneropenaeus merguiensis vitellogenin mRNA, com... 40 8.5
30gb|AY065042.1| Arabidopsis thaliana AT5g13110/T19L5_70 mRNA, com... 40 8.5
31gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome 40 8.5
32dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.5
33gb|AC136489.3| Homo sapiens chromosome X clone RP13-749I18 map X... 40 8.5
34gb|AC136488.3| Homo sapiens chromosome X clone RP13-886N14, comp... 40 8.5
35dbj|AP003827.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.5
36dbj|AP003930.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.5
37dbj|AK120069.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.5
38gb|AC007934.7|AC007934 Homo sapiens, clone RP11-29A1, complete s... 40 8.5
39dbj|AP001002.4| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 8.5
40gb|AC090227.10| Homo sapiens chromosome 18, clone RP11-813F20, c... 40 8.5 
>dbj|AK073097.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033005K23, full
            insert sequence
          Length = 2065

 Score =  343 bits (173), Expect = 4e-91
 Identities = 500/606 (82%), Gaps = 3/606 (0%)
 Strand = Plus / Plus

                                                                        
Query: 19   ggccccttcgccggcctggtcgtctgcgtcactgggctgtccaannng-cgaggnagtca 77
            ||||||||||||||  ||||| |||||||||| ||||| |||||   | ||||| | |||
Sbjct: 429  ggccccttcgccggattggtcatctgcgtcaccgggctatccaaagaggcgagg-actca 487

                                                                        
Query: 78   ggtgaaggaggccgccgagnaggctgggaggcgactacagcggcagcctgcaccccaaat 137
            ||||||||||||  | ||| ||| |||||||||| |||||||| |||||||| ||||| |
Sbjct: 488  ggtgaaggaggcgactgag-aggatgggaggcgagtacagcgggagcctgcatcccaagt 546

                                                                        
Query: 138  gcactcacctcgtggtgcagagcttcgccggccgcaagtttgagcacgctctcaagcatg 197
            |||| ||||| ||||| ||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 547  gcacccacctagtggttcagagcttcgccggccgcaagtttgagcacgcggtcaagcatg 606

                                                                        
Query: 198  gtcccaggaatggtctttttgttgtcacgctgggctggtttgtcgattgtgttcgaagga 257
            |  | | |||||| || |||||||| || || || ||| |||| ||||| || || ||||
Sbjct: 607  gcgcgaagaatggcctctttgttgtaacacttggttggcttgtggattgcgtgcggagga 666

                                                                        
Query: 258  acatgaggctggatgaatccttgtacagtatcaagaacattggggagaacggcctgcctc 317
             ||||||| |||||||||| || || || |||||||||||||||||||| ||  |||| |
Sbjct: 667  gcatgaggttggatgaatcgttatatagcatcaagaacattggggagaatggaatgccac 726

                                                                        
Query: 318  ttggggaatacaaccggcttgttggacttcctgttaatgagaagtcatgccttccaccaa 377
            | ||||| | |||||||||||| ||   |||||||| || ||| || ||||||||||| |
Sbjct: 727  tcggggagttcaaccggcttgtcggcgctcctgttagtgggaattcttgccttccaccga 786

                                                                        
Query: 378  tgatttttcaagacaaagcatgctcgggcacaacacataagcaccagcttcagcctcata 437
            |||| ||||| || ||| |||  || | ||| ||  | ||||| | ||||||| |   ||
Sbjct: 787  tgatgtttcaggaaaaaacattttcagacacgaccgaaaagcatcggcttcagacatcta 846

                                                                        
Query: 438  gagaagaacctgaacatgatgtgttcgtttttacgaatgacacaatctacattgaccctg 497
            || |||||| ||| |||||||  ||  | ||||| || ||| | ||||||||||||||||
Sbjct: 847  gaaaagaacatgaccatgatgaatttctctttacaaacgactcgatctacattgaccctg 906

                                                                        
Query: 498  ggatatctggtgacatgaagaagaagatatcggacgctgctacgagtgaagatgcaaaat 557
            ||||||||||||| |||| ||||||| |||| || |||||||| || |||| ||||||||
Sbjct: 907  ggatatctggtgaaatgaggaagaaggtatctgatgctgctactagagaaggtgcaaaat 966

                                                                        
Query: 558  tattggaccactggtttattggttgccacgccacatatgttgtgtgtgaggatgcttctg 617
            | |||||||||||||||||||| || || || |||||||||||||||||||| |||||||
Sbjct: 967  tgttggaccactggtttattggctgtcatgcgacatatgttgtgtgtgaggacgcttctg 1026

                  
Query: 618  tcaaga 623
            ||||||
Sbjct: 1027 tcaaga 1032
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>gb|AY224539.1| Oryza sativa (japonica cultivar-group) isolate 23388 unknown mRNA
          Length = 1530

 Score =  291 bits (147), Expect = 1e-75
 Identities = 495/607 (81%), Gaps = 4/607 (0%)
 Strand = Plus / Plus

                                                                       
Query: 19  ggccccttcgccggcctggtcgtctgcgtcactgggctgtccaannngcgaggnagtcag 78
           ||||||||||||||  ||||| |||||||||| ||||| |||||   |||||| | ||||
Sbjct: 36  ggccccttcgccggattggtcatctgcgtcaccgggctatccaaagagcgagg-actcag 94

                                                                       
Query: 79  gtgaaggaggccgccgagnaggctgggaggcgactacagcggcagcctgcaccccaaatg 138
           |||||||||||   |    ||| |||||||||| |||||||| |||||||| ||||| ||
Sbjct: 95  gtgaaggaggcgaactgagaggatgggaggcgagtacagcgggagcctgcatcccaagtg 154

                                                                       
Query: 139 cactcacct-cgtggtgcagagcttcgccggccgcaagtttgagcacgctctcaagcatg 197
           ||| ||||| || |  ||| |||||||||||||||||||||||||||||  |||||||||
Sbjct: 155 cacccacctacgcgcagcacagcttcgccggccgcaagtttgagcacgcggtcaagcatg 214

                                                                       
Query: 198 gtcccaggaatggtctttttgttgtcacgctgggctggtttgtcgattgtgttcgaagga 257
           |  | | |||||| || |||||||| || || || ||| |||| ||||| || || ||||
Sbjct: 215 gcgcgaagaatggcctctttgttgtaacacttggttggcttgtggattgcgtgcggagga 274

                                                                       
Query: 258 acatgaggctggatgaatccttgtacagtatcaagaacattggggagaacggcctgcctc 317
            ||||||| |||||||||| || || || |||||||||||||||||||| ||  |||| |
Sbjct: 275 gcatgaggttggatgaatcgttatatagcatcaagaacattggggagaatggaatgccac 334

                                                                       
Query: 318 ttggggaatacaaccggcttgttggacttcctgttaatgagaagtcatgccttccaccaa 377
           | ||||| | |||||||||||| ||   |||||||| || ||| || ||||||||||| |
Sbjct: 335 tcggggagttcaaccggcttgtcggcgctcctgttagtgggaattcttgccttccaccga 394

                                                                       
Query: 378 tgatttttcaagacaaagcatgctcgggcacaacacataagcaccagcttcagcctcata 437
           |||| ||||| || ||| |||  || | ||| ||  | ||||| | ||||||| |   ||
Sbjct: 395 tgatgtttcaggaaaaaacattttcagacacgaccgaaaagcatcggcttcagacatcta 454

                                                                       
Query: 438 gagaagaacctgaacatgatgtgttcgtttttacgaatgacacaatctacattgaccctg 497
           || |||||| ||| |||||||  ||  | ||||| || ||| | ||||||||||||||||
Sbjct: 455 gaaaagaacatgaccatgatgaatttctctttacaaacgactcgatctacattgaccctg 514

                                                                       
Query: 498 ggatatctggtgacatgaagaagaagatatc-ggacgctgctacgagtgaagatgcaaaa 556
           ||||||||||||| |||| ||||||| |||| | | |||||||| || |||| |||||||
Sbjct: 515 ggatatctggtgaaatgaggaagaag-tatctgaatgctgctactagagaaggtgcaaaa 573

                                                                       
Query: 557 ttattggaccactggtttattggttgccacgccacatatgttgtgtgtgaggatgcttct 616
           || |||||||||||||||||||| || || || |||||||||||||||||||| ||||||
Sbjct: 574 ttgttggaccactggtttattggctgtcatgcgacatatgttgtgtgtgaggacgcttct 633

                  
Query: 617 gtcaaga 623
           |||||||
Sbjct: 634 gtcaaga 640
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>dbj|AK063852.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-122-D01, full
           insert sequence
          Length = 1282

 Score =  170 bits (86), Expect = 3e-39
 Identities = 128/142 (90%)
 Strand = Plus / Plus

                                                                       
Query: 482 atctacattgaccctgggatatctggtgacatgaagaagaagatatcggacgctgctacg 541
           ||||||||||||||||||||||||||||| |||| ||||||| |||| || |||||||| 
Sbjct: 98  atctacattgaccctgggatatctggtgaaatgaggaagaaggtatctgatgctgctact 157

                                                                       
Query: 542 agtgaagatgcaaaattattggaccactggtttattggttgccacgccacatatgttgtg 601
           || |||| ||||||||| |||||||||||||||||||| || || || ||||||||||||
Sbjct: 158 agagaaggtgcaaaattgttggaccactggtttattggctgtcatgcgacatatgttgtg 217

                                 
Query: 602 tgtgaggatgcttctgtcaaga 623
           |||||||| |||||||||||||
Sbjct: 218 tgtgaggacgcttctgtcaaga 239
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  109 bits (55), Expect = 1e-20
 Identities = 82/91 (90%)
 Strand = Plus / Plus

                                                                            
Query: 533      gctgctacgagtgaagatgcaaaattattggaccactggtttattggttgccacgccaca 592
                |||||||| || |||| ||||||||| |||||||||||||||||||| || || || |||
Sbjct: 16272874 gctgctactagagaaggtgcaaaattgttggaccactggtttattggctgtcatgcgaca 16272933

                                               
Query: 593      tatgttgtgtgtgaggatgcttctgtcaaga 623
                ||||||||||||||||| |||||||||||||
Sbjct: 16272934 tatgttgtgtgtgaggacgcttctgtcaaga 16272964



 Score =  101 bits (51), Expect = 3e-18
 Identities = 210/263 (79%)
 Strand = Plus / Plus

                                                                            
Query: 261      tgaggctggatgaatccttgtacagtatcaagaacattggggagaacggcctgcctcttg 320
                ||||| |||||||||| || || || |||||||||||||||||||| ||  |||| || |
Sbjct: 16272286 tgaggttggatgaatcgttatatagcatcaagaacattggggagaatggaatgccactcg 16272345

                                                                            
Query: 321      gggaatacaaccggcttgttggacttcctgttaatgagaagtcatgccttccaccaatga 380
                |||| | |||||||||||| ||   |||||||| || ||| || ||||||||||| ||||
Sbjct: 16272346 gggagttcaaccggcttgtcggcgctcctgttagtgggaattcttgccttccaccgatga 16272405

                                                                            
Query: 381      tttttcaagacaaagcatgctcgggcacaacacataagcaccagcttcagcctcatagag 440
                | ||||| || ||| |||  || | ||| ||  | ||||| | ||||||| |   |||| 
Sbjct: 16272406 tgtttcaggaaaaaacattttcagacacgaccgaaaagcatcggcttcagacatctagaa 16272465

                                                                            
Query: 441      aagaacctgaacatgatgtgttcgtttttacgaatgacacaatctacattgaccctggga 500
                |||||| ||| |||||||  ||  | ||||| || ||| | |||||||||||||||||||
Sbjct: 16272466 aagaacatgaccatgatgaatttctctttacaaacgactcgatctacattgaccctggga 16272525

                                       
Query: 501      tatctggtgacatgaagaagaag 523
                |||||||||| |||| |||||||
Sbjct: 16272526 tatctggtgaaatgaggaagaag 16272548



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 39/41 (95%)
 Strand = Plus / Plus

                                                         
Query: 158      agcttcgccggccgcaagtttgagcacgctctcaagcatgg 198
                |||||||||||||||||||||||||||||  ||||||||||
Sbjct: 16272104 agcttcgccggccgcaagtttgagcacgcggtcaagcatgg 16272144



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 72/84 (85%), Gaps = 1/84 (1%)
 Strand = Plus / Plus

                                                                            
Query: 75       tcaggtgaaggaggccgccgagnaggctgggaggcgactacagcggcagcctgcacccca 134
                |||||||||||||||  | ||| ||| |||||||||| |||||||| |||||||| ||||
Sbjct: 16271908 tcaggtgaaggaggcgactgag-aggatgggaggcgagtacagcgggagcctgcatccca 16271966

                                        
Query: 135      aatgcactcacctcgtggtgcaga 158
                | ||||| ||||| ||||| ||||
Sbjct: 16271967 agtgcacccacctagtggttcaga 16271990



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                            
Query: 19       ggccccttcgccggcctggtcgtctgcgtcactgggctgtccaa 62
                ||||||||||||||  ||||| |||||||||| ||||| |||||
Sbjct: 16271722 ggccccttcgccggattggtcatctgcgtcaccgggctatccaa 16271765
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>dbj|AP005570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1344_B01
          Length = 170912

 Score =  109 bits (55), Expect = 1e-20
 Identities = 82/91 (90%)
 Strand = Plus / Plus

                                                                         
Query: 533   gctgctacgagtgaagatgcaaaattattggaccactggtttattggttgccacgccaca 592
             |||||||| || |||| ||||||||| |||||||||||||||||||| || || || |||
Sbjct: 89390 gctgctactagagaaggtgcaaaattgttggaccactggtttattggctgtcatgcgaca 89449

                                            
Query: 593   tatgttgtgtgtgaggatgcttctgtcaaga 623
             ||||||||||||||||| |||||||||||||
Sbjct: 89450 tatgttgtgtgtgaggacgcttctgtcaaga 89480



 Score =  101 bits (51), Expect = 3e-18
 Identities = 210/263 (79%)
 Strand = Plus / Plus

                                                                         
Query: 261   tgaggctggatgaatccttgtacagtatcaagaacattggggagaacggcctgcctcttg 320
             ||||| |||||||||| || || || |||||||||||||||||||| ||  |||| || |
Sbjct: 88802 tgaggttggatgaatcgttatatagcatcaagaacattggggagaatggaatgccactcg 88861

                                                                         
Query: 321   gggaatacaaccggcttgttggacttcctgttaatgagaagtcatgccttccaccaatga 380
             |||| | |||||||||||| ||   |||||||| || ||| || ||||||||||| ||||
Sbjct: 88862 gggagttcaaccggcttgtcggcgctcctgttagtgggaattcttgccttccaccgatga 88921

                                                                         
Query: 381   tttttcaagacaaagcatgctcgggcacaacacataagcaccagcttcagcctcatagag 440
             | ||||| || ||| |||  || | ||| ||  | ||||| | ||||||| |   |||| 
Sbjct: 88922 tgtttcaggaaaaaacattttcagacacgaccgaaaagcatcggcttcagacatctagaa 88981

                                                                         
Query: 441   aagaacctgaacatgatgtgttcgtttttacgaatgacacaatctacattgaccctggga 500
             |||||| ||| |||||||  ||  | ||||| || ||| | |||||||||||||||||||
Sbjct: 88982 aagaacatgaccatgatgaatttctctttacaaacgactcgatctacattgaccctggga 89041

                                    
Query: 501   tatctggtgacatgaagaagaag 523
             |||||||||| |||| |||||||
Sbjct: 89042 tatctggtgaaatgaggaagaag 89064



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 39/41 (95%)
 Strand = Plus / Plus

                                                      
Query: 158   agcttcgccggccgcaagtttgagcacgctctcaagcatgg 198
             |||||||||||||||||||||||||||||  ||||||||||
Sbjct: 88620 agcttcgccggccgcaagtttgagcacgcggtcaagcatgg 88660



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 72/84 (85%), Gaps = 1/84 (1%)
 Strand = Plus / Plus

                                                                         
Query: 75    tcaggtgaaggaggccgccgagnaggctgggaggcgactacagcggcagcctgcacccca 134
             |||||||||||||||  | ||| ||| |||||||||| |||||||| |||||||| ||||
Sbjct: 88424 tcaggtgaaggaggcgactgag-aggatgggaggcgagtacagcgggagcctgcatccca 88482

                                     
Query: 135   aatgcactcacctcgtggtgcaga 158
             | ||||| ||||| ||||| ||||
Sbjct: 88483 agtgcacccacctagtggttcaga 88506



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                         
Query: 19    ggccccttcgccggcctggtcgtctgcgtcactgggctgtccaa 62
             ||||||||||||||  ||||| |||||||||| ||||| |||||
Sbjct: 88238 ggccccttcgccggattggtcatctgcgtcaccgggctatccaa 88281
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>gb|AC137830.6| Medicago truncatula clone mth2-33g10, complete sequence
          Length = 113855

 Score = 48.1 bits (24), Expect = 0.035
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                         
Query: 206   aatggtctttttgttgtcacgctgggctggtttgtcgattgtgt 249
             |||||||| ||||||||||| ||||| |||||||| ||| ||||
Sbjct: 95184 aatggtctctttgttgtcacactgggttggtttgtggatagtgt 95141
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>ref|NM_006283.1| Homo sapiens transforming, acidic coiled-coil containing protein 1
           (TACC1), mRNA
          Length = 7758

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 437 agagaagaacctgaacatgat 457
           |||||||||||||||||||||
Sbjct: 726 agagaagaacctgaacatgat 746
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>gb|AY072876.2| Homo sapiens transforming, acidic coiled-coil containing protein 1
           variant TACC1-E (TACC1) mRNA, partial cds; alternatively
           spliced
          Length = 1561

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 437 agagaagaacctgaacatgat 457
           |||||||||||||||||||||
Sbjct: 337 agagaagaacctgaacatgat 357
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>gb|BC041391.1| Homo sapiens transforming, acidic coiled-coil containing protein 1,
            mRNA (cDNA clone MGC:43967 IMAGE:5276767), complete cds
          Length = 3017

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 437  agagaagaacctgaacatgat 457
            |||||||||||||||||||||
Sbjct: 982  agagaagaacctgaacatgat 1002
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>emb|BX647696.1|HSM807842 Homo sapiens mRNA; cDNA DKFZp686K18126 (from clone DKFZp686K18126)
          Length = 5512

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 437 agagaagaacctgaacatgat 457
           |||||||||||||||||||||
Sbjct: 733 agagaagaacctgaacatgat 753
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>gb|AF049910.1|AF049910 Homo sapiens TACC1 (TACC1) mRNA, complete cds
          Length = 7758

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 437 agagaagaacctgaacatgat 457
           |||||||||||||||||||||
Sbjct: 726 agagaagaacctgaacatgat 746
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>gb|AC067817.10| Homo sapiens chromosome 8, clone RP11-723D22, complete sequence
          Length = 172678

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 437   agagaagaacctgaacatgat 457
             |||||||||||||||||||||
Sbjct: 74006 agagaagaacctgaacatgat 74026
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>gb|AY618313.1| Chelon labrosus semaphorin 6A1 gene, partial cds
          Length = 456

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 417 agcaccagcttcagcctcat 436
           ||||||||||||||||||||
Sbjct: 236 agcaccagcttcagcctcat 255
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>gb|AC116896.7| Mus musculus chromosome 8, clone RP24-531D19, complete sequence
          Length = 163072

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 550   tgcaaaattattggaccact 569
             ||||||||||||||||||||
Sbjct: 93596 tgcaaaattattggaccact 93577
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>ref|NM_128184.1| Arabidopsis thaliana unknown protein AT2G26270 mRNA, complete cds
          Length = 1413

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 56/68 (82%)
 Strand = Plus / Plus

                                                                       
Query: 173 aagtttgagcacgctctcaagcatggtcccaggaatggtctttttgttgtcacgctgggc 232
           |||||||||||| || | || |||||  | || |||||||| |||||||| ||| | |||
Sbjct: 106 aagtttgagcacactttgaaacatggggcaagaaatggtctctttgttgttacgattggc 165

                   
Query: 233 tggtttgt 240
           ||||||||
Sbjct: 166 tggtttgt 173
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>ref|NM_121314.3| Arabidopsis thaliana G6PD2; glucose-6-phosphate 1-dehydrogenase
           AT5G13110 (G6PD2) mRNA, complete cds
          Length = 2112

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 253 aaggaacatgaggctggatgaatc 276
           |||||||||||||||||| |||||
Sbjct: 763 aaggaacatgaggctggaagaatc 786
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>ref|XM_478440.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 4266

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 76  caggtgaaggaggccgccga 95
           ||||||||||||||||||||
Sbjct: 223 caggtgaaggaggccgccga 242
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>gb|AC124350.4| Mus musculus BAC clone RP24-466K21 from chromosome 8, complete sequence
          Length = 160905

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 550   tgcaaaattattggaccact 569
             ||||||||||||||||||||
Sbjct: 20777 tgcaaaattattggaccact 20796
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>gb|AC091170.15| Homo sapiens chromosome 18, clone RP11-879D5, complete sequence
          Length = 198586

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 425   cttcagcctcatagagaaga 444
             ||||||||||||||||||||
Sbjct: 10036 cttcagcctcatagagaaga 10055
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>gb|AC119419.9| Medicago truncatula clone mth2-6b12, complete sequence
          Length = 106395

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 591   catatgttgtgtgtgaggat 610
             ||||||||||||||||||||
Sbjct: 68805 catatgttgtgtgtgaggat 68786
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>emb|AL354861.11| Human DNA sequence from clone RP11-180I4 on chromosome 9 Contains an
             alpha type 7 proteasome subunit (PSMA7) pseudogene, the 3'
             end of a novel gene, a novel gene and a CpG island,
             complete sequence
          Length = 182653

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 434   catagagaagaacctgaaca 453
             ||||||||||||||||||||
Sbjct: 68897 catagagaagaacctgaaca 68916
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>gb|AC128680.6| Homo sapiens 3 BAC RP13-551P9 (Roswell Park Cancer institute Human BAC
             Library) complete sequence
          Length = 146175

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 543   gtgaagatgcaaaattattg 562
             ||||||||||||||||||||
Sbjct: 44546 gtgaagatgcaaaattattg 44527
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>gb|AY051318.3| Penaeus semisulcatus vitellogenin VTG mRNA, complete cds
          Length = 7920

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 416 aagcaccagcttcagcctca 435
           ||||||||||||||||||||
Sbjct: 996 aagcaccagcttcagcctca 977
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>emb|X84229.1|ATG6PDHE5 A.thaliana mRNA for glucose-6-phosphate dehydrogenase (clone E5)
          Length = 1630

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 253 aaggaacatgaggctggatgaatc 276
           |||||||||||||||||| |||||
Sbjct: 311 aaggaacatgaggctggaagaatc 334
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>emb|BX321862.1| Nitrosomonas europaea ATCC 19718, complete genome; segment 7/10
          Length = 295250

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 375   caatgatttttcaagacaaa 394
             ||||||||||||||||||||
Sbjct: 29544 caatgatttttcaagacaaa 29563
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>gb|AC113209.4| Homo sapiens chromosome 8, clone RP11-1002K11, complete sequence
          Length = 193991

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 365   tgccttccaccaatgatttt 384
             ||||||||||||||||||||
Sbjct: 87318 tgccttccaccaatgatttt 87299
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>gb|AC004484.3| Arabidopsis thaliana chromosome 2 clone T1D16 map B68, complete
             sequence
          Length = 82212

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 56/68 (82%)
 Strand = Plus / Minus

                                                                         
Query: 173   aagtttgagcacgctctcaagcatggtcccaggaatggtctttttgttgtcacgctgggc 232
             |||||||||||| || | || |||||  | || |||||||| |||||||| ||| | |||
Sbjct: 35333 aagtttgagcacactttgaaacatggggcaagaaatggtctctttgttgttacgattggc 35274

                     
Query: 233   tggtttgt 240
             ||||||||
Sbjct: 35273 tggtttgt 35266
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>gb|AC012413.10| Homo sapiens chromosome 8, clone RP11-401H2, complete sequence
          Length = 171226

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 376    aatgatttttcaagacaaag 395
              ||||||||||||||||||||
Sbjct: 101423 aatgatttttcaagacaaag 101442
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>gb|AY499620.2| Fenneropenaeus merguiensis vitellogenin mRNA, complete cds
          Length = 7961

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 416  aagcaccagcttcagcctca 435
            ||||||||||||||||||||
Sbjct: 1000 aagcaccagcttcagcctca 981
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>gb|AY065042.1| Arabidopsis thaliana AT5g13110/T19L5_70 mRNA, complete cds
          Length = 2114

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 253 aaggaacatgaggctggatgaatc 276
           |||||||||||||||||| |||||
Sbjct: 762 aaggaacatgaggctggaagaatc 785
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>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome
          Length = 2628784

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 115     cagcggcagcctgcacccca 134
               ||||||||||||||||||||
Sbjct: 1745400 cagcggcagcctgcacccca 1745381
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 76       caggtgaaggaggccgccga 95
                ||||||||||||||||||||
Sbjct: 20116340 caggtgaaggaggccgccga 20116321
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>gb|AC136489.3| Homo sapiens chromosome X clone RP13-749I18 map Xp11.3 complete
             sequence
          Length = 164468

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 338   gttggacttcctgttaatga 357
             ||||||||||||||||||||
Sbjct: 13768 gttggacttcctgttaatga 13787
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>gb|AC136488.3| Homo sapiens chromosome X clone RP13-886N14, complete sequence
          Length = 163835

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 338    gttggacttcctgttaatga 357
              ||||||||||||||||||||
Sbjct: 112356 gttggacttcctgttaatga 112375
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>dbj|AP003827.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1372_D12
          Length = 179898

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 76    caggtgaaggaggccgccga 95
             ||||||||||||||||||||
Sbjct: 18728 caggtgaaggaggccgccga 18709
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>dbj|AP003930.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1657_A07
          Length = 125217

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 76    caggtgaaggaggccgccga 95
             ||||||||||||||||||||
Sbjct: 80943 caggtgaaggaggccgccga 80924
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>dbj|AK120069.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013003D09, full
           insert sequence
          Length = 4447

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 76  caggtgaaggaggccgccga 95
           ||||||||||||||||||||
Sbjct: 244 caggtgaaggaggccgccga 263
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>gb|AC007934.7|AC007934 Homo sapiens, clone RP11-29A1, complete sequence
          Length = 157625

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 543   gtgaagatgcaaaattattg 562
             ||||||||||||||||||||
Sbjct: 21651 gtgaagatgcaaaattattg 21670
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>dbj|AP001002.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-678K21, complete
             sequences
          Length = 164380

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 365   tgccttccaccaatgatttt 384
             ||||||||||||||||||||
Sbjct: 94086 tgccttccaccaatgatttt 94067
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>gb|AC090227.10| Homo sapiens chromosome 18, clone RP11-813F20, complete sequence
          Length = 224366

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 425    cttcagcctcatagagaaga 444
              ||||||||||||||||||||
Sbjct: 219756 cttcagcctcatagagaaga 219775


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,601,509
Number of Sequences: 3902068
Number of extensions: 5601509
Number of successful extensions: 98558
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98378
Number of HSP's gapped (non-prelim): 176
length of query: 623
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 600
effective length of database: 17,143,297,704
effective search space: 10285978622400
effective search space used: 10285978622400
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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