| Clone Name | basd24e12 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_472878.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1167 Score = 502 bits (253), Expect = e-139 Identities = 498/575 (86%), Gaps = 4/575 (0%) Strand = Plus / Plus Query: 1 tcacatacttcctccggccaatctgggnaatctccgcccgagcccttcaagnataatccc 60 |||||||||||||| ||||||| |||| | ||||| ||| |||||||||| || |||| Sbjct: 200 tcacatacttcctcaggccaatatggg-agtctcctcccaagcccttcaaaacta-tccc 257 Query: 61 tcactactacaatgagaatgtcaccatggnagaacctctgcaagttacatgggtggaaag 120 ||| |||||| |||||||||||||||||| ||| ||||||||||| ||||||||||||| Sbjct: 258 tcattactaccatgagaatgtcaccatggc-gaaactctgcaagttgcatgggtggaaag 316 Query: 121 tcagggagaccccacgccgtgttttcgatgctgtgctcttcagtaatgagcttgatatcc 180 || ||||||||||||| ||||| ||||||||||| || ||||| |||||||| ||||| | Sbjct: 317 tccgggagaccccacgacgtgtcttcgatgctgtactattcagcaatgagctcgatattc 376 Query: 181 ttgaacttcgttggaatgaactcagcccctatgtgtcagagttcgtcctgcttgagtcca 240 ||||| | |||||||||||||| ||||||||||| |||||||| || ||||||||||| | Sbjct: 377 ttgaaatacgttggaatgaactaagcccctatgtctcagagtttgtgctgcttgagtcga 436 Query: 241 actcaactttcactggcgtgataaagccactcttcttcaaggaaaaccgccatcgattta 300 ||||||| |||||||| ||| |||||| || |||||||||||| || ||||||||| Sbjct: 437 actcaaccttcactggattgaaaaagcccctgcacttcaaggaaaatcgtcatcgatttg 496 Query: 301 gatttgctgaatcgcggctgacctatggcacatatgggggaagattcatgaagggcgaaa 360 ||||||||||||| |||||||| ||||| | ||||||||| ||| ||||||| |||| Sbjct: 497 gatttgctgaatcacggctgacatatggtatgattgggggaaggttcgtgaagggagaaa 556 Query: 361 atccatt-gttgaggagtcgtatcagagggttgccctggaccagcttcttaggattgcaa 419 | ||||| ||||||||||| ||||||||||||||||||||||||||| ||| |||||||| Sbjct: 557 acccatttgttgaggagtcatatcagagggttgccctggaccagcttattaagattgcaa 616 Query: 420 gaattgaagatgacgacatattgatcatgtcagatgttgatgaaatcccaagtggccaca 479 ||| |||||||| ||| | |||||||||||||||||||||||||||||||||||||||| Sbjct: 617 aaatagaagatgatgacctgttgatcatgtcagatgttgatgaaatcccaagtggccaca 676 Query: 480 ccatcaatctcttgagatggtgcgacgacacgcctaagatagtccatcttcagctcagga 539 | || ||||| |||||||||||||||||| ||| |||| | ||||||||||| |||| Sbjct: 677 caattgatctcctgagatggtgcgacgacattcctgagatccttcatcttcagcttagga 736 Query: 540 attatctgtactcatttgagttttttctggatgac 574 |||| || ||||||||||| ||||| ||||||||| Sbjct: 737 attacctctactcatttgaatttttcctggatgac 771
>emb|AL606595.4|OSJN00035 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0044K18, complete sequence Length = 176615 Score = 502 bits (253), Expect = e-139 Identities = 498/575 (86%), Gaps = 4/575 (0%) Strand = Plus / Minus Query: 1 tcacatacttcctccggccaatctgggnaatctccgcccgagcccttcaagnataatccc 60 |||||||||||||| ||||||| |||| | ||||| ||| |||||||||| || |||| Sbjct: 35062 tcacatacttcctcaggccaatatggg-agtctcctcccaagcccttcaaaacta-tccc 35005 Query: 61 tcactactacaatgagaatgtcaccatggnagaacctctgcaagttacatgggtggaaag 120 ||| |||||| |||||||||||||||||| ||| ||||||||||| ||||||||||||| Sbjct: 35004 tcattactaccatgagaatgtcaccatggc-gaaactctgcaagttgcatgggtggaaag 34946 Query: 121 tcagggagaccccacgccgtgttttcgatgctgtgctcttcagtaatgagcttgatatcc 180 || ||||||||||||| ||||| ||||||||||| || ||||| |||||||| ||||| | Sbjct: 34945 tccgggagaccccacgacgtgtcttcgatgctgtactattcagcaatgagctcgatattc 34886 Query: 181 ttgaacttcgttggaatgaactcagcccctatgtgtcagagttcgtcctgcttgagtcca 240 ||||| | |||||||||||||| ||||||||||| |||||||| || ||||||||||| | Sbjct: 34885 ttgaaatacgttggaatgaactaagcccctatgtctcagagtttgtgctgcttgagtcga 34826 Query: 241 actcaactttcactggcgtgataaagccactcttcttcaaggaaaaccgccatcgattta 300 ||||||| |||||||| ||| |||||| || |||||||||||| || ||||||||| Sbjct: 34825 actcaaccttcactggattgaaaaagcccctgcacttcaaggaaaatcgtcatcgatttg 34766 Query: 301 gatttgctgaatcgcggctgacctatggcacatatgggggaagattcatgaagggcgaaa 360 ||||||||||||| |||||||| ||||| | ||||||||| ||| ||||||| |||| Sbjct: 34765 gatttgctgaatcacggctgacatatggtatgattgggggaaggttcgtgaagggagaaa 34706 Query: 361 atcca-ttgttgaggagtcgtatcagagggttgccctggaccagcttcttaggattgcaa 419 | ||| ||||||||||||| ||||||||||||||||||||||||||| ||| |||||||| Sbjct: 34705 acccatttgttgaggagtcatatcagagggttgccctggaccagcttattaagattgcaa 34646 Query: 420 gaattgaagatgacgacatattgatcatgtcagatgttgatgaaatcccaagtggccaca 479 ||| |||||||| ||| | |||||||||||||||||||||||||||||||||||||||| Sbjct: 34645 aaatagaagatgatgacctgttgatcatgtcagatgttgatgaaatcccaagtggccaca 34586 Query: 480 ccatcaatctcttgagatggtgcgacgacacgcctaagatagtccatcttcagctcagga 539 | || ||||| |||||||||||||||||| ||| |||| | ||||||||||| |||| Sbjct: 34585 caattgatctcctgagatggtgcgacgacattcctgagatccttcatcttcagcttagga 34526 Query: 540 attatctgtactcatttgagttttttctggatgac 574 |||| || ||||||||||| ||||| ||||||||| Sbjct: 34525 attacctctactcatttgaatttttcctggatgac 34491
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 502 bits (253), Expect = e-139 Identities = 498/575 (86%), Gaps = 4/575 (0%) Strand = Plus / Minus Query: 1 tcacatacttcctccggccaatctgggnaatctccgcccgagcccttcaagnataatccc 60 |||||||||||||| ||||||| |||| | ||||| ||| |||||||||| || |||| Sbjct: 23870189 tcacatacttcctcaggccaatatggg-agtctcctcccaagcccttcaaaacta-tccc 23870132 Query: 61 tcactactacaatgagaatgtcaccatggnagaacctctgcaagttacatgggtggaaag 120 ||| |||||| |||||||||||||||||| ||| ||||||||||| ||||||||||||| Sbjct: 23870131 tcattactaccatgagaatgtcaccatggc-gaaactctgcaagttgcatgggtggaaag 23870073 Query: 121 tcagggagaccccacgccgtgttttcgatgctgtgctcttcagtaatgagcttgatatcc 180 || ||||||||||||| ||||| ||||||||||| || ||||| |||||||| ||||| | Sbjct: 23870072 tccgggagaccccacgacgtgtcttcgatgctgtactattcagcaatgagctcgatattc 23870013 Query: 181 ttgaacttcgttggaatgaactcagcccctatgtgtcagagttcgtcctgcttgagtcca 240 ||||| | |||||||||||||| ||||||||||| |||||||| || ||||||||||| | Sbjct: 23870012 ttgaaatacgttggaatgaactaagcccctatgtctcagagtttgtgctgcttgagtcga 23869953 Query: 241 actcaactttcactggcgtgataaagccactcttcttcaaggaaaaccgccatcgattta 300 ||||||| |||||||| ||| |||||| || |||||||||||| || ||||||||| Sbjct: 23869952 actcaaccttcactggattgaaaaagcccctgcacttcaaggaaaatcgtcatcgatttg 23869893 Query: 301 gatttgctgaatcgcggctgacctatggcacatatgggggaagattcatgaagggcgaaa 360 ||||||||||||| |||||||| ||||| | ||||||||| ||| ||||||| |||| Sbjct: 23869892 gatttgctgaatcacggctgacatatggtatgattgggggaaggttcgtgaagggagaaa 23869833 Query: 361 atcca-ttgttgaggagtcgtatcagagggttgccctggaccagcttcttaggattgcaa 419 | ||| ||||||||||||| ||||||||||||||||||||||||||| ||| |||||||| Sbjct: 23869832 acccatttgttgaggagtcatatcagagggttgccctggaccagcttattaagattgcaa 23869773 Query: 420 gaattgaagatgacgacatattgatcatgtcagatgttgatgaaatcccaagtggccaca 479 ||| |||||||| ||| | |||||||||||||||||||||||||||||||||||||||| Sbjct: 23869772 aaatagaagatgatgacctgttgatcatgtcagatgttgatgaaatcccaagtggccaca 23869713 Query: 480 ccatcaatctcttgagatggtgcgacgacacgcctaagatagtccatcttcagctcagga 539 | || ||||| |||||||||||||||||| ||| |||| | ||||||||||| |||| Sbjct: 23869712 caattgatctcctgagatggtgcgacgacattcctgagatccttcatcttcagcttagga 23869653 Query: 540 attatctgtactcatttgagttttttctggatgac 574 |||| || ||||||||||| ||||| ||||||||| Sbjct: 23869652 attacctctactcatttgaatttttcctggatgac 23869618
>dbj|AK100897.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023131C16, full insert sequence Length = 1808 Score = 502 bits (253), Expect = e-139 Identities = 498/575 (86%), Gaps = 4/575 (0%) Strand = Plus / Plus Query: 1 tcacatacttcctccggccaatctgggnaatctccgcccgagcccttcaagnataatccc 60 |||||||||||||| ||||||| |||| | ||||| ||| |||||||||| || |||| Sbjct: 425 tcacatacttcctcaggccaatatggg-agtctcctcccaagcccttcaaaacta-tccc 482 Query: 61 tcactactacaatgagaatgtcaccatggnagaacctctgcaagttacatgggtggaaag 120 ||| |||||| |||||||||||||||||| ||| ||||||||||| ||||||||||||| Sbjct: 483 tcattactaccatgagaatgtcaccatggc-gaaactctgcaagttgcatgggtggaaag 541 Query: 121 tcagggagaccccacgccgtgttttcgatgctgtgctcttcagtaatgagcttgatatcc 180 || ||||||||||||| ||||| ||||||||||| || ||||| |||||||| ||||| | Sbjct: 542 tccgggagaccccacgacgtgtcttcgatgctgtactattcagcaatgagctcgatattc 601 Query: 181 ttgaacttcgttggaatgaactcagcccctatgtgtcagagttcgtcctgcttgagtcca 240 ||||| | |||||||||||||| ||||||||||| |||||||| || ||||||||||| | Sbjct: 602 ttgaaatacgttggaatgaactaagcccctatgtctcagagtttgtgctgcttgagtcga 661 Query: 241 actcaactttcactggcgtgataaagccactcttcttcaaggaaaaccgccatcgattta 300 ||||||| |||||||| ||| |||||| || |||||||||||| || ||||||||| Sbjct: 662 actcaaccttcactggattgaaaaagcccctgcacttcaaggaaaatcgtcatcgatttg 721 Query: 301 gatttgctgaatcgcggctgacctatggcacatatgggggaagattcatgaagggcgaaa 360 ||||||||||||| |||||||| ||||| | ||||||||| ||| ||||||| |||| Sbjct: 722 gatttgctgaatcacggctgacatatggtatgattgggggaaggttcgtgaagggagaaa 781 Query: 361 atccatt-gttgaggagtcgtatcagagggttgccctggaccagcttcttaggattgcaa 419 | ||||| ||||||||||| ||||||||||||||||||||||||||| ||| |||||||| Sbjct: 782 acccatttgttgaggagtcatatcagagggttgccctggaccagcttattaagattgcaa 841 Query: 420 gaattgaagatgacgacatattgatcatgtcagatgttgatgaaatcccaagtggccaca 479 ||| |||||||| ||| | |||||||||||||||||||||||||||||||||||||||| Sbjct: 842 aaatagaagatgatgacctgttgatcatgtcagatgttgatgaaatcccaagtggccaca 901 Query: 480 ccatcaatctcttgagatggtgcgacgacacgcctaagatagtccatcttcagctcagga 539 | || ||||| |||||||||||||||||| ||| |||| | ||||||||||| |||| Sbjct: 902 caattgatctcctgagatggtgcgacgacattcctgagatccttcatcttcagcttagga 961 Query: 540 attatctgtactcatttgagttttttctggatgac 574 |||| || ||||||||||| ||||| ||||||||| Sbjct: 962 attacctctactcatttgaatttttcctggatgac 996
>dbj|AK067372.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106K01, full insert sequence Length = 2486 Score = 502 bits (253), Expect = e-139 Identities = 498/575 (86%), Gaps = 4/575 (0%) Strand = Plus / Plus Query: 1 tcacatacttcctccggccaatctgggnaatctccgcccgagcccttcaagnataatccc 60 |||||||||||||| ||||||| |||| | ||||| ||| |||||||||| || |||| Sbjct: 455 tcacatacttcctcaggccaatatggg-agtctcctcccaagcccttcaaaacta-tccc 512 Query: 61 tcactactacaatgagaatgtcaccatggnagaacctctgcaagttacatgggtggaaag 120 ||| |||||| |||||||||||||||||| ||| ||||||||||| ||||||||||||| Sbjct: 513 tcattactaccatgagaatgtcaccatggc-gaaactctgcaagttgcatgggtggaaag 571 Query: 121 tcagggagaccccacgccgtgttttcgatgctgtgctcttcagtaatgagcttgatatcc 180 || ||||||||||||| ||||| ||||||||||| || ||||| |||||||| ||||| | Sbjct: 572 tccgggagaccccacgacgtgtcttcgatgctgtactattcagcaatgagctcgatattc 631 Query: 181 ttgaacttcgttggaatgaactcagcccctatgtgtcagagttcgtcctgcttgagtcca 240 ||||| | |||||||||||||| ||||||||||| |||||||| || ||||||||||| | Sbjct: 632 ttgaaatacgttggaatgaactaagcccctatgtctcagagtttgtgctgcttgagtcga 691 Query: 241 actcaactttcactggcgtgataaagccactcttcttcaaggaaaaccgccatcgattta 300 ||||||| |||||||| ||| |||||| || |||||||||||| || ||||||||| Sbjct: 692 actcaaccttcactggattgaaaaagcccctgcacttcaaggaaaatcgtcatcgatttg 751 Query: 301 gatttgctgaatcgcggctgacctatggcacatatgggggaagattcatgaagggcgaaa 360 ||||||||||||| |||||||| ||||| | ||||||||| ||| ||||||| |||| Sbjct: 752 gatttgctgaatcacggctgacatatggtatgattgggggaaggttcgtgaagggagaaa 811 Query: 361 atccatt-gttgaggagtcgtatcagagggttgccctggaccagcttcttaggattgcaa 419 | ||||| ||||||||||| ||||||||||||||||||||||||||| ||| |||||||| Sbjct: 812 acccatttgttgaggagtcatatcagagggttgccctggaccagcttattaagattgcaa 871 Query: 420 gaattgaagatgacgacatattgatcatgtcagatgttgatgaaatcccaagtggccaca 479 ||| |||||||| ||| | |||||||||||||||||||||||||||||||||||||||| Sbjct: 872 aaatagaagatgatgacctgttgatcatgtcagatgttgatgaaatcccaagtggccaca 931 Query: 480 ccatcaatctcttgagatggtgcgacgacacgcctaagatagtccatcttcagctcagga 539 | || ||||| |||||||||||||||||| ||| |||| | ||||||||||| |||| Sbjct: 932 caattgatctcctgagatggtgcgacgacattcctgagatccttcatcttcagcttagga 991 Query: 540 attatctgtactcatttgagttttttctggatgac 574 |||| || ||||||||||| ||||| ||||||||| Sbjct: 992 attacctctactcatttgaatttttcctggatgac 1026
>dbj|AK063950.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-F04, full insert sequence Length = 1962 Score = 502 bits (253), Expect = e-139 Identities = 498/575 (86%), Gaps = 4/575 (0%) Strand = Plus / Plus Query: 1 tcacatacttcctccggccaatctgggnaatctccgcccgagcccttcaagnataatccc 60 |||||||||||||| ||||||| |||| | ||||| ||| |||||||||| || |||| Sbjct: 489 tcacatacttcctcaggccaatatggg-agtctcctcccaagcccttcaaaacta-tccc 546 Query: 61 tcactactacaatgagaatgtcaccatggnagaacctctgcaagttacatgggtggaaag 120 ||| |||||| |||||||||||||||||| ||| ||||||||||| ||||||||||||| Sbjct: 547 tcattactaccatgagaatgtcaccatggc-gaaactctgcaagttgcatgggtggaaag 605 Query: 121 tcagggagaccccacgccgtgttttcgatgctgtgctcttcagtaatgagcttgatatcc 180 || ||||||||||||| ||||| ||||||||||| || ||||| |||||||| ||||| | Sbjct: 606 tccgggagaccccacgacgtgtcttcgatgctgtactattcagcaatgagctcgatattc 665 Query: 181 ttgaacttcgttggaatgaactcagcccctatgtgtcagagttcgtcctgcttgagtcca 240 ||||| | |||||||||||||| ||||||||||| |||||||| || ||||||||||| | Sbjct: 666 ttgaaatacgttggaatgaactaagcccctatgtctcagagtttgtgctgcttgagtcga 725 Query: 241 actcaactttcactggcgtgataaagccactcttcttcaaggaaaaccgccatcgattta 300 ||||||| |||||||| ||| |||||| || |||||||||||| || ||||||||| Sbjct: 726 actcaaccttcactggattgaaaaagcccctgcacttcaaggaaaatcgtcatcgatttg 785 Query: 301 gatttgctgaatcgcggctgacctatggcacatatgggggaagattcatgaagggcgaaa 360 ||||||||||||| |||||||| ||||| | ||||||||| ||| ||||||| |||| Sbjct: 786 gatttgctgaatcacggctgacatatggtatgattgggggaaggttcgtgaagggagaaa 845 Query: 361 atccatt-gttgaggagtcgtatcagagggttgccctggaccagcttcttaggattgcaa 419 | ||||| ||||||||||| ||||||||||||||||||||||||||| ||| |||||||| Sbjct: 846 acccatttgttgaggagtcatatcagagggttgccctggaccagcttattaagattgcaa 905 Query: 420 gaattgaagatgacgacatattgatcatgtcagatgttgatgaaatcccaagtggccaca 479 ||| |||||||| ||| | |||||||||||||||||||||||||||||||||||||||| Sbjct: 906 aaatagaagatgatgacctgttgatcatgtcagatgttgatgaaatcccaagtggccaca 965 Query: 480 ccatcaatctcttgagatggtgcgacgacacgcctaagatagtccatcttcagctcagga 539 | || ||||| |||||||||||||||||| ||| |||| | ||||||||||| |||| Sbjct: 966 caattgatctcctgagatggtgcgacgacattcctgagatccttcatcttcagcttagga 1025 Query: 540 attatctgtactcatttgagttttttctggatgac 574 |||| || ||||||||||| ||||| ||||||||| Sbjct: 1026 attacctctactcatttgaatttttcctggatgac 1060
>ref|XM_466518.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1739 Score = 252 bits (127), Expect = 1e-63 Identities = 415/506 (82%), Gaps = 4/506 (0%) Strand = Plus / Plus Query: 59 cctcactactacaatgagaatgtcaccatggnagaacctctgcaagttacatgggtggaa 118 ||||||||||| |||| |||||| | |||| | ||||| |||||||| ||||| ||||| Sbjct: 549 cctcactactatcatgaaaatgtctcgatggca-aacctatgcaagttgcatggatggaa 607 Query: 119 agtcagggagaccccacgccgtgttttcgatgctgtgctcttcagtaatgagcttgatat 178 ||||||||| || |||||||||||||| ||||||||||| ||||| ||||||||||| || Sbjct: 608 agtcagggaaactccacgccgtgtttttgatgctgtgcttttcagcaatgagcttgacat 667 Query: 179 ccttgaacttcgttggaatgaactcagcccctatgtgtcagagttcgtcctgcttgagtc 238 ||||| | |||||| |||| || ||||| ||||||||||| || || ||||| ||||| Sbjct: 668 tcttgatatccgttggcatgagcttagcccatatgtgtcagaatttgtgctgctcgagtc 727 Query: 239 caactcaactttcactggcgtgataaagccactcttcttcaaggaaaaccgccatcgatt 298 ||||||||| ||||||||| ||| |||| ||| ||||||||||||||| || || || Sbjct: 728 caactcaaccttcactggcctgaaaaaggatctccacttcaaggaaaaccgtcaacgctt 787 Query: 299 tagatttgctgaatcgcggctgacctatggca-catatgggggaagattcatgaagggcg 357 | |||||||||||| ||| |||||||||| | ||| || |||||||| ||||||| | Sbjct: 788 tgaatttgctgaatcacggttgacctatggtatgata-ggtggaagatttgtgaaggggg 846 Query: 358 aaaatcca-ttgttgaggagtcgtatcagagggttgccctggaccagcttcttaggattg 416 | || ||| |||| |||||||| ||||| |||||||| || ||||||||| | | |||| Sbjct: 847 agaacccatttgtcgaggagtcatatcaaagggttgctcttgaccagcttatcaaaattg 906 Query: 417 caagaattgaagatgacgacatattgatcatgtcagatgttgatgaaatcccaagtggcc 476 | |||| |||||| ||| | ||||||||||| ||||||||||| ||||| ||||||| Sbjct: 907 ctggaatcacagatgatgaccttttgatcatgtctgatgttgatgagatccccagtggcc 966 Query: 477 acaccatcaatctcttgagatggtgcgacgacacgcctaagatagtccatcttcagctca 536 | || ||||| |||||||| ||||| || ||||| ||| | | | ||||| ||||||| Sbjct: 967 atacaatcaacctcttgaggtggtgtgatgacactcctgaagtgcttcatctccagctca 1026 Query: 537 ggaattatctgtactcatttgagttt 562 |||| ||||| ||||||||| ||||| Sbjct: 1027 ggaactatctttactcatttcagttt 1052
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 252 bits (127), Expect = 1e-63 Identities = 415/506 (82%), Gaps = 4/506 (0%) Strand = Plus / Minus Query: 59 cctcactactacaatgagaatgtcaccatggnagaacctctgcaagttacatgggtggaa 118 ||||||||||| |||| |||||| | |||| | ||||| |||||||| ||||| ||||| Sbjct: 23090418 cctcactactatcatgaaaatgtctcgatggca-aacctatgcaagttgcatggatggaa 23090360 Query: 119 agtcagggagaccccacgccgtgttttcgatgctgtgctcttcagtaatgagcttgatat 178 ||||||||| || |||||||||||||| ||||||||||| ||||| ||||||||||| || Sbjct: 23090359 agtcagggaaactccacgccgtgtttttgatgctgtgcttttcagcaatgagcttgacat 23090300 Query: 179 ccttgaacttcgttggaatgaactcagcccctatgtgtcagagttcgtcctgcttgagtc 238 ||||| | |||||| |||| || ||||| ||||||||||| || || ||||| ||||| Sbjct: 23090299 tcttgatatccgttggcatgagcttagcccatatgtgtcagaatttgtgctgctcgagtc 23090240 Query: 239 caactcaactttcactggcgtgataaagccactcttcttcaaggaaaaccgccatcgatt 298 ||||||||| ||||||||| ||| |||| ||| ||||||||||||||| || || || Sbjct: 23090239 caactcaaccttcactggcctgaaaaaggatctccacttcaaggaaaaccgtcaacgctt 23090180 Query: 299 tagatttgctgaatcgcggctgacctatggca-catatgggggaagattcatgaagggcg 357 | |||||||||||| ||| |||||||||| | ||| || |||||||| ||||||| | Sbjct: 23090179 tgaatttgctgaatcacggttgacctatggtatgata-ggtggaagatttgtgaaggggg 23090121 Query: 358 aaaatcca-ttgttgaggagtcgtatcagagggttgccctggaccagcttcttaggattg 416 | || ||| |||| |||||||| ||||| |||||||| || ||||||||| | | |||| Sbjct: 23090120 agaacccatttgtcgaggagtcatatcaaagggttgctcttgaccagcttatcaaaattg 23090061 Query: 417 caagaattgaagatgacgacatattgatcatgtcagatgttgatgaaatcccaagtggcc 476 | |||| |||||| ||| | ||||||||||| ||||||||||| ||||| ||||||| Sbjct: 23090060 ctggaatcacagatgatgaccttttgatcatgtctgatgttgatgagatccccagtggcc 23090001 Query: 477 acaccatcaatctcttgagatggtgcgacgacacgcctaagatagtccatcttcagctca 536 | || ||||| |||||||| ||||| || ||||| ||| | | | ||||| ||||||| Sbjct: 23090000 atacaatcaacctcttgaggtggtgtgatgacactcctgaagtgcttcatctccagctca 23089941 Query: 537 ggaattatctgtactcatttgagttt 562 |||| ||||| ||||||||| ||||| Sbjct: 23089940 ggaactatctttactcatttcagttt 23089915 Score = 172 bits (87), Expect = 8e-40 Identities = 225/270 (83%), Gaps = 1/270 (0%) Strand = Plus / Minus Query: 59 cctcactactacaatgagaatgtcaccatggnagaacctctgcaagttacatgggtggaa 118 |||||||||||||| || |||||| | |||| ||| | |||||||||||||| ||||| Sbjct: 23103951 cctcactactacaacgaaaatgtctcaatggcc-aacttatgcaagttacatggatggaa 23103893 Query: 119 agtcagggagaccccacgccgtgttttcgatgctgtgctcttcagtaatgagcttgatat 178 ||||||||| || || || |||||||| ||||||||||| ||||| || ||||||||||| Sbjct: 23103892 agtcagggaaacgccgcggcgtgtttttgatgctgtgcttttcagcaacgagcttgatat 23103833 Query: 179 ccttgaacttcgttggaatgaactcagcccctatgtgtcagagttcgtcctgcttgagtc 238 ||||| | |||||| |||| || ||||| |||||||||||||| || |||||||||| Sbjct: 23103832 tcttgatatccgttggcatgagcttagcccttatgtgtcagagtttgtgttgcttgagtc 23103773 Query: 239 caactcaactttcactggcgtgataaagccactcttcttcaaggaaaaccgccatcgatt 298 ||||||||| ||||||||| | | |||| ||| ||||||||||||||| || || || Sbjct: 23103772 caactcaaccttcactggccttaaaaaggatctccacttcaaggaaaaccgtcaacgttt 23103713 Query: 299 tagatttgctgaatcgcggctgacctatgg 328 | |||||||||||| ||| |||||||||| Sbjct: 23103712 tgaatttgctgaatcacggttgacctatgg 23103683 Score = 129 bits (65), Expect = 1e-26 Identities = 173/209 (82%) Strand = Plus / Minus Query: 366 ttgttgaggagtcgtatcagagggttgccctggaccagcttcttaggattgcaagaattg 425 |||| |||||||| |||||||||||||| || ||||||||| ||| ||||| | || Sbjct: 23103644 ttgtcgaggagtcatatcagagggttgctcttgaccagcttattaaaattgccgggatca 23103585 Query: 426 aagatgacgacatattgatcatgtcagatgttgatgaaatcccaagtggccacaccatca 485 |||||| ||| | ||||||||||| ||||||||||| || |||||||| || || |||| Sbjct: 23103584 cagatgatgacctgttgatcatgtctgatgttgatgagattccaagtgggcatacgatca 23103525 Query: 486 atctcttgagatggtgcgacgacacgcctaagatagtccatcttcagctcaggaattatc 545 | |||||||||||||| || |||| ||| | || ||||||| ||||||||||| |||| Sbjct: 23103524 acctcttgagatggtgtgatgacatacctgaagtactccatctccagctcaggaactatc 23103465 Query: 546 tgtactcatttgagttttttctggatgac 574 ||||||||||||| ||||| || |||||| Sbjct: 23103464 tgtactcatttgaatttttccttgatgac 23103436
>dbj|AP004023.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1126_D09 Length = 138615 Score = 252 bits (127), Expect = 1e-63 Identities = 415/506 (82%), Gaps = 4/506 (0%) Strand = Plus / Minus Query: 59 cctcactactacaatgagaatgtcaccatggnagaacctctgcaagttacatgggtggaa 118 ||||||||||| |||| |||||| | |||| | ||||| |||||||| ||||| ||||| Sbjct: 57456 cctcactactatcatgaaaatgtctcgatggca-aacctatgcaagttgcatggatggaa 57398 Query: 119 agtcagggagaccccacgccgtgttttcgatgctgtgctcttcagtaatgagcttgatat 178 ||||||||| || |||||||||||||| ||||||||||| ||||| ||||||||||| || Sbjct: 57397 agtcagggaaactccacgccgtgtttttgatgctgtgcttttcagcaatgagcttgacat 57338 Query: 179 ccttgaacttcgttggaatgaactcagcccctatgtgtcagagttcgtcctgcttgagtc 238 ||||| | |||||| |||| || ||||| ||||||||||| || || ||||| ||||| Sbjct: 57337 tcttgatatccgttggcatgagcttagcccatatgtgtcagaatttgtgctgctcgagtc 57278 Query: 239 caactcaactttcactggcgtgataaagccactcttcttcaaggaaaaccgccatcgatt 298 ||||||||| ||||||||| ||| |||| ||| ||||||||||||||| || || || Sbjct: 57277 caactcaaccttcactggcctgaaaaaggatctccacttcaaggaaaaccgtcaacgctt 57218 Query: 299 tagatttgctgaatcgcggctgacctatggca-catatgggggaagattcatgaagggcg 357 | |||||||||||| ||| |||||||||| | ||| || |||||||| ||||||| | Sbjct: 57217 tgaatttgctgaatcacggttgacctatggtatgata-ggtggaagatttgtgaaggggg 57159 Query: 358 aaaatcca-ttgttgaggagtcgtatcagagggttgccctggaccagcttcttaggattg 416 | || ||| |||| |||||||| ||||| |||||||| || ||||||||| | | |||| Sbjct: 57158 agaacccatttgtcgaggagtcatatcaaagggttgctcttgaccagcttatcaaaattg 57099 Query: 417 caagaattgaagatgacgacatattgatcatgtcagatgttgatgaaatcccaagtggcc 476 | |||| |||||| ||| | ||||||||||| ||||||||||| ||||| ||||||| Sbjct: 57098 ctggaatcacagatgatgaccttttgatcatgtctgatgttgatgagatccccagtggcc 57039 Query: 477 acaccatcaatctcttgagatggtgcgacgacacgcctaagatagtccatcttcagctca 536 | || ||||| |||||||| ||||| || ||||| ||| | | | ||||| ||||||| Sbjct: 57038 atacaatcaacctcttgaggtggtgtgatgacactcctgaagtgcttcatctccagctca 56979 Query: 537 ggaattatctgtactcatttgagttt 562 |||| ||||| ||||||||| ||||| Sbjct: 56978 ggaactatctttactcatttcagttt 56953 Score = 172 bits (87), Expect = 8e-40 Identities = 225/270 (83%), Gaps = 1/270 (0%) Strand = Plus / Minus Query: 59 cctcactactacaatgagaatgtcaccatggnagaacctctgcaagttacatgggtggaa 118 |||||||||||||| || |||||| | |||| ||| | |||||||||||||| ||||| Sbjct: 70989 cctcactactacaacgaaaatgtctcaatggcc-aacttatgcaagttacatggatggaa 70931 Query: 119 agtcagggagaccccacgccgtgttttcgatgctgtgctcttcagtaatgagcttgatat 178 ||||||||| || || || |||||||| ||||||||||| ||||| || ||||||||||| Sbjct: 70930 agtcagggaaacgccgcggcgtgtttttgatgctgtgcttttcagcaacgagcttgatat 70871 Query: 179 ccttgaacttcgttggaatgaactcagcccctatgtgtcagagttcgtcctgcttgagtc 238 ||||| | |||||| |||| || ||||| |||||||||||||| || |||||||||| Sbjct: 70870 tcttgatatccgttggcatgagcttagcccttatgtgtcagagtttgtgttgcttgagtc 70811 Query: 239 caactcaactttcactggcgtgataaagccactcttcttcaaggaaaaccgccatcgatt 298 ||||||||| ||||||||| | | |||| ||| ||||||||||||||| || || || Sbjct: 70810 caactcaaccttcactggccttaaaaaggatctccacttcaaggaaaaccgtcaacgttt 70751 Query: 299 tagatttgctgaatcgcggctgacctatgg 328 | |||||||||||| ||| |||||||||| Sbjct: 70750 tgaatttgctgaatcacggttgacctatgg 70721 Score = 129 bits (65), Expect = 1e-26 Identities = 173/209 (82%) Strand = Plus / Minus Query: 366 ttgttgaggagtcgtatcagagggttgccctggaccagcttcttaggattgcaagaattg 425 |||| |||||||| |||||||||||||| || ||||||||| ||| ||||| | || Sbjct: 70682 ttgtcgaggagtcatatcagagggttgctcttgaccagcttattaaaattgccgggatca 70623 Query: 426 aagatgacgacatattgatcatgtcagatgttgatgaaatcccaagtggccacaccatca 485 |||||| ||| | ||||||||||| ||||||||||| || |||||||| || || |||| Sbjct: 70622 cagatgatgacctgttgatcatgtctgatgttgatgagattccaagtgggcatacgatca 70563 Query: 486 atctcttgagatggtgcgacgacacgcctaagatagtccatcttcagctcaggaattatc 545 | |||||||||||||| || |||| ||| | || ||||||| ||||||||||| |||| Sbjct: 70562 acctcttgagatggtgtgatgacatacctgaagtactccatctccagctcaggaactatc 70503 Query: 546 tgtactcatttgagttttttctggatgac 574 ||||||||||||| ||||| || |||||| Sbjct: 70502 tgtactcatttgaatttttccttgatgac 70474
>dbj|AK060490.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-H10, full insert sequence Length = 1738 Score = 242 bits (122), Expect = 1e-60 Identities = 412/505 (81%), Gaps = 3/505 (0%) Strand = Plus / Plus Query: 59 cctcactactacaatgagaatgtcaccatggnagaacctctgcaagttacatgggtggaa 118 ||||||||||| |||| |||||| | |||| | ||||| |||||||| ||||| ||||| Sbjct: 549 cctcactactatcatgaaaatgtctcgatggca-aacctatgcaagttgcatggatggaa 607 Query: 119 agtcagggagaccccacgccgtgttttcgatgctgtgctcttcagtaatgagcttgatat 178 ||||||||| || |||||||||||||| ||||||||||| ||||| ||||||||||| || Sbjct: 608 agtcagggaaactccacgccgtgtttttgatgctgtgcttttcagcaatgagcttgacat 667 Query: 179 ccttgaacttcgttggaatgaactcagcccctatgtgtcagagttcgtcctgcttgagtc 238 ||||| | |||||| |||| || ||||| ||||||||||| || || ||||| ||||| Sbjct: 668 tcttgatatccgttggcatgagcttagcccatatgtgtcagaatttgtgctgctcgagtc 727 Query: 239 caactcaactttcactggcgtgataaagccactcttcttcaaggaaaaccgccatcgatt 298 ||||||||| ||||||||| ||| |||| ||| ||||||||||||||| || || || Sbjct: 728 caactcaaccttcactggcctgaaaaaggatctccacttcaaggaaaaccgtcaacgctt 787 Query: 299 tagatttgctgaatcgcggctgacctatggca-catatgggggaagattcatgaagggcg 357 | |||||||||||| ||| |||||||||| | ||| || |||||||| ||||||| | Sbjct: 788 tgaatttgctgaatcacggttgacctatggtatgata-ggtggaagatttgtgaaggggg 846 Query: 358 aaaatccattgttgaggagtcgtatcagagggttgccctggaccagcttcttaggattgc 417 || | |||| |||||||| ||||| |||||||| || ||||||||| | | ||||| Sbjct: 847 gaacccatttgtcgaggagtcatatcaaagggttgctcttgaccagcttatcaaaattgc 906 Query: 418 aagaattgaagatgacgacatattgatcatgtcagatgttgatgaaatcccaagtggcca 477 |||| |||||| ||| | ||||||||||| ||||||||||| ||||| |||||||| Sbjct: 907 tggaatcacagatgatgaccttttgatcatgtctgatgttgatgagatccccagtggcca 966 Query: 478 caccatcaatctcttgagatggtgcgacgacacgcctaagatagtccatcttcagctcag 537 || ||||| |||||||| ||||| || ||||| ||| | | | ||||| |||||||| Sbjct: 967 tacaatcaacctcttgaggtggtgtgatgacactcctgaagtgcttcatctccagctcag 1026 Query: 538 gaattatctgtactcatttgagttt 562 ||| ||||| ||||||||| ||||| Sbjct: 1027 gaactatctttactcatttcagttt 1051
>ref|XM_466520.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2228 Score = 172 bits (87), Expect = 8e-40 Identities = 225/270 (83%), Gaps = 1/270 (0%) Strand = Plus / Plus Query: 59 cctcactactacaatgagaatgtcaccatggnagaacctctgcaagttacatgggtggaa 118 |||||||||||||| || |||||| | |||| ||| | |||||||||||||| ||||| Sbjct: 921 cctcactactacaacgaaaatgtctcaatggcc-aacttatgcaagttacatggatggaa 979 Query: 119 agtcagggagaccccacgccgtgttttcgatgctgtgctcttcagtaatgagcttgatat 178 ||||||||| || || || |||||||| ||||||||||| ||||| || ||||||||||| Sbjct: 980 agtcagggaaacgccgcggcgtgtttttgatgctgtgcttttcagcaacgagcttgatat 1039 Query: 179 ccttgaacttcgttggaatgaactcagcccctatgtgtcagagttcgtcctgcttgagtc 238 ||||| | |||||| |||| || ||||| |||||||||||||| || |||||||||| Sbjct: 1040 tcttgatatccgttggcatgagcttagcccttatgtgtcagagtttgtgttgcttgagtc 1099 Query: 239 caactcaactttcactggcgtgataaagccactcttcttcaaggaaaaccgccatcgatt 298 ||||||||| ||||||||| | | |||| ||| ||||||||||||||| || || || Sbjct: 1100 caactcaaccttcactggccttaaaaaggatctccacttcaaggaaaaccgtcaacgttt 1159 Query: 299 tagatttgctgaatcgcggctgacctatgg 328 | |||||||||||| ||| |||||||||| Sbjct: 1160 tgaatttgctgaatcacggttgacctatgg 1189 Score = 129 bits (65), Expect = 1e-26 Identities = 173/209 (82%) Strand = Plus / Plus Query: 366 ttgttgaggagtcgtatcagagggttgccctggaccagcttcttaggattgcaagaattg 425 |||| |||||||| |||||||||||||| || ||||||||| ||| ||||| | || Sbjct: 1228 ttgtcgaggagtcatatcagagggttgctcttgaccagcttattaaaattgccgggatca 1287 Query: 426 aagatgacgacatattgatcatgtcagatgttgatgaaatcccaagtggccacaccatca 485 |||||| ||| | ||||||||||| ||||||||||| || |||||||| || || |||| Sbjct: 1288 cagatgatgacctgttgatcatgtctgatgttgatgagattccaagtgggcatacgatca 1347 Query: 486 atctcttgagatggtgcgacgacacgcctaagatagtccatcttcagctcaggaattatc 545 | |||||||||||||| || |||| ||| | || ||||||| ||||||||||| |||| Sbjct: 1348 acctcttgagatggtgtgatgacatacctgaagtactccatctccagctcaggaactatc 1407 Query: 546 tgtactcatttgagttttttctggatgac 574 ||||||||||||| ||||| || |||||| Sbjct: 1408 tgtactcatttgaatttttccttgatgac 1436
>dbj|AK070690.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023058I02, full insert sequence Length = 2261 Score = 172 bits (87), Expect = 8e-40 Identities = 225/270 (83%), Gaps = 1/270 (0%) Strand = Plus / Plus Query: 59 cctcactactacaatgagaatgtcaccatggnagaacctctgcaagttacatgggtggaa 118 |||||||||||||| || |||||| | |||| ||| | |||||||||||||| ||||| Sbjct: 953 cctcactactacaacgaaaatgtctcaatggcc-aacttatgcaagttacatggatggaa 1011 Query: 119 agtcagggagaccccacgccgtgttttcgatgctgtgctcttcagtaatgagcttgatat 178 ||||||||| || || || |||||||| ||||||||||| ||||| || ||||||||||| Sbjct: 1012 agtcagggaaacgccgcggcgtgtttttgatgctgtgcttttcagcaacgagcttgatat 1071 Query: 179 ccttgaacttcgttggaatgaactcagcccctatgtgtcagagttcgtcctgcttgagtc 238 ||||| | |||||| |||| || ||||| |||||||||||||| || |||||||||| Sbjct: 1072 tcttgatatccgttggcatgagcttagcccttatgtgtcagagtttgtgttgcttgagtc 1131 Query: 239 caactcaactttcactggcgtgataaagccactcttcttcaaggaaaaccgccatcgatt 298 ||||||||| ||||||||| | | |||| ||| ||||||||||||||| || || || Sbjct: 1132 caactcaaccttcactggccttaaaaaggatctccacttcaaggaaaaccgtcaacgttt 1191 Query: 299 tagatttgctgaatcgcggctgacctatgg 328 | |||||||||||| ||| |||||||||| Sbjct: 1192 tgaatttgctgaatcacggttgacctatgg 1221 Score = 129 bits (65), Expect = 1e-26 Identities = 173/209 (82%) Strand = Plus / Plus Query: 366 ttgttgaggagtcgtatcagagggttgccctggaccagcttcttaggattgcaagaattg 425 |||| |||||||| |||||||||||||| || ||||||||| ||| ||||| | || Sbjct: 1260 ttgtcgaggagtcatatcagagggttgctcttgaccagcttattaaaattgccgggatca 1319 Query: 426 aagatgacgacatattgatcatgtcagatgttgatgaaatcccaagtggccacaccatca 485 |||||| ||| | ||||||||||| ||||||||||| || |||||||| || || |||| Sbjct: 1320 cagatgatgacctgttgatcatgtctgatgttgatgagattccaagtgggcatacgatca 1379 Query: 486 atctcttgagatggtgcgacgacacgcctaagatagtccatcttcagctcaggaattatc 545 | |||||||||||||| || |||| ||| | || ||||||| ||||||||||| |||| Sbjct: 1380 acctcttgagatggtgtgatgacatacctgaagtactccatctccagctcaggaactatc 1439 Query: 546 tgtactcatttgagttttttctggatgac 574 ||||||||||||| ||||| || |||||| Sbjct: 1440 tgtactcatttgaatttttccttgatgac 1468
>dbj|AK065136.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002A04, full insert sequence Length = 3334 Score = 172 bits (87), Expect = 8e-40 Identities = 225/270 (83%), Gaps = 1/270 (0%) Strand = Plus / Plus Query: 59 cctcactactacaatgagaatgtcaccatggnagaacctctgcaagttacatgggtggaa 118 |||||||||||||| || |||||| | |||| ||| | |||||||||||||| ||||| Sbjct: 1882 cctcactactacaacgaaaatgtctcaatggcc-aacttatgcaagttacatggatggaa 1940 Query: 119 agtcagggagaccccacgccgtgttttcgatgctgtgctcttcagtaatgagcttgatat 178 ||||||||| || || || |||||||| ||||||||||| ||||| || ||||||||||| Sbjct: 1941 agtcagggaaacgccgcggcgtgtttttgatgctgtgcttttcagcaacgagcttgatat 2000 Query: 179 ccttgaacttcgttggaatgaactcagcccctatgtgtcagagttcgtcctgcttgagtc 238 ||||| | |||||| |||| || ||||| |||||||||||||| || |||||||||| Sbjct: 2001 tcttgatatccgttggcatgagcttagcccttatgtgtcagagtttgtgttgcttgagtc 2060 Query: 239 caactcaactttcactggcgtgataaagccactcttcttcaaggaaaaccgccatcgatt 298 ||||||||| ||||||||| | | |||| ||| ||||||||||||||| || || || Sbjct: 2061 caactcaaccttcactggccttaaaaaggatctccacttcaaggaaaaccgtcaacgttt 2120 Query: 299 tagatttgctgaatcgcggctgacctatgg 328 | |||||||||||| ||| |||||||||| Sbjct: 2121 tgaatttgctgaatcacggttgacctatgg 2150 Score = 129 bits (65), Expect = 1e-26 Identities = 173/209 (82%) Strand = Plus / Plus Query: 366 ttgttgaggagtcgtatcagagggttgccctggaccagcttcttaggattgcaagaattg 425 |||| |||||||| |||||||||||||| || ||||||||| ||| ||||| | || Sbjct: 2189 ttgtcgaggagtcatatcagagggttgctcttgaccagcttattaaaattgccgggatca 2248 Query: 426 aagatgacgacatattgatcatgtcagatgttgatgaaatcccaagtggccacaccatca 485 |||||| ||| | ||||||||||| ||||||||||| || |||||||| || || |||| Sbjct: 2249 cagatgatgacctgttgatcatgtctgatgttgatgagattccaagtgggcatacgatca 2308 Query: 486 atctcttgagatggtgcgacgacacgcctaagatagtccatcttcagctcaggaattatc 545 | |||||||||||||| || |||| ||| | || ||||||| ||||||||||| |||| Sbjct: 2309 acctcttgagatggtgtgatgacatacctgaagtactccatctccagctcaggaactatc 2368 Query: 546 tgtactcatttgagttttttctggatgac 574 ||||||||||||| ||||| || |||||| Sbjct: 2369 tgtactcatttgaatttttccttgatgac 2397
>emb|AJ629867.2| Cucumis sativus mRNA for putative N-acetylglucosaminyltransferase III (gnT-III gene) Length = 2192 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 440 ttgatcatgtcagatgttgatgaaatcccaagtggccacaccatcaatctcttgagatgg 499 ||||| ||||| |||||||| ||||| ||||| | ||||| || ||||||||||||||| Sbjct: 1249 ttgataatgtctgatgttgacgaaattccaagcaggcacacaattaatctcttgagatgg 1308 Query: 500 tg 501 || Sbjct: 1309 tg 1310 Score = 48.1 bits (24), Expect = 0.032 Identities = 39/44 (88%) Strand = Plus / Plus Query: 132 ccacgccgtgttttcgatgctgtgctcttcagtaatgagcttga 175 ||||| ||||||| ||||||||||| |||||||||||| |||| Sbjct: 940 ccacgacgtgtttatgatgctgtgctgttcagtaatgagattga 983
>emb|AJ891043.1| Populus tremula x Populus alba mRNA for beta 1,4 N-acetylglucosaminyltransferase (poGNT3 gene), clone INRA 717 1B4 Length = 1167 Score = 50.1 bits (25), Expect = 0.008 Identities = 55/65 (84%) Strand = Plus / Plus Query: 446 atgtcagatgttgatgaaatcccaagtggccacaccatcaatctcttgagatggtgcgac 505 ||||||||||||||||| || || || | ||||| |||||||||||||| ||||| || Sbjct: 643 atgtcagatgttgatgagataccgagcagacacactatcaatctcttgaggtggtgtgat 702 Query: 506 gacac 510 ||||| Sbjct: 703 gacac 707
>ref|NM_101170.2| Arabidopsis thaliana acetylglucosaminyltransferase/ transferase, transferring glycosyl groups AT1G12990 mRNA, complete cds Length = 2030 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Plus Query: 446 atgtcagatgttgatgaaatcccaagtggccacaccatcaatctcttgagatggtgcga 504 ||||| ||||| ||||| || |||||| | |||||||| || || |||||||||||||| Sbjct: 988 atgtctgatgtcgatgagattccaagtagacacaccattaaccttttgagatggtgcga 1046
>ref|NM_111028.2| Arabidopsis thaliana acetylglucosaminyltransferase/ transferase, transferring glycosyl groups AT3G01620 mRNA, complete cds Length = 1493 Score = 46.1 bits (23), Expect = 0.13 Identities = 56/67 (83%) Strand = Plus / Plus Query: 440 ttgatcatgtcagatgttgatgaaatcccaagtggccacaccatcaatctcttgagatgg 499 ||||| ||||| ||||| ||||| ||||| || ||||| ||||||||||| | |||||| Sbjct: 833 ttgataatgtcggatgtcgatgagatcccgagcggccataccatcaatctgcttagatgg 892 Query: 500 tgcgacg 506 || |||| Sbjct: 893 tgtgacg 899
>gb|AC009325.8|ATAC009325 Arabidopsis thaliana chromosome III BAC F4P13 genomic sequence, complete sequence Length = 105543 Score = 46.1 bits (23), Expect = 0.13 Identities = 56/67 (83%) Strand = Plus / Minus Query: 440 ttgatcatgtcagatgttgatgaaatcccaagtggccacaccatcaatctcttgagatgg 499 ||||| ||||| ||||| ||||| ||||| || ||||| ||||||||||| | |||||| Sbjct: 57848 ttgataatgtcggatgtcgatgagatcccgagcggccataccatcaatctgcttagatgg 57789 Query: 500 tgcgacg 506 || |||| Sbjct: 57788 tgtgacg 57782
>emb|BX818732.1|CNS0AAN4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL95ZF08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1776 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Plus Query: 446 atgtcagatgttgatgaaatcccaagtggccacaccatcaatctcttgagatggtgcga 504 ||||| ||||| ||||| || |||||| | |||||||| || || |||||||||||||| Sbjct: 985 atgtctgatgtcgatgagattccaagtagacacaccattaaccttttgagatggtgcga 1043
>gb|BT004421.1| Arabidopsis thaliana clone U20435 unknown protein (At3g01620) mRNA, complete cds Length = 1198 Score = 46.1 bits (23), Expect = 0.13 Identities = 56/67 (83%) Strand = Plus / Plus Query: 440 ttgatcatgtcagatgttgatgaaatcccaagtggccacaccatcaatctcttgagatgg 499 ||||| ||||| ||||| ||||| ||||| || ||||| ||||||||||| | |||||| Sbjct: 637 ttgataatgtcggatgtcgatgagatcccgagcggccataccatcaatctgcttagatgg 696 Query: 500 tgcgacg 506 || |||| Sbjct: 697 tgtgacg 703
>gb|BT002978.1| Arabidopsis thaliana clone RAFL15-02-G18 (R20435) unknown protein (At3g01620) mRNA, complete cds Length = 1512 Score = 46.1 bits (23), Expect = 0.13 Identities = 56/67 (83%) Strand = Plus / Plus Query: 440 ttgatcatgtcagatgttgatgaaatcccaagtggccacaccatcaatctcttgagatgg 499 ||||| ||||| ||||| ||||| ||||| || ||||| ||||||||||| | |||||| Sbjct: 833 ttgataatgtcggatgtcgatgagatcccgagcggccataccatcaatctgcttagatgg 892 Query: 500 tgcgacg 506 || |||| Sbjct: 893 tgtgacg 899
>gb|AC007357.2|F3F19 Arabidopsis thaliana chromosome 1 BAC F3F19 sequence, complete sequence Length = 99758 Score = 46.1 bits (23), Expect = 0.13 Identities = 50/59 (84%) Strand = Plus / Plus Query: 446 atgtcagatgttgatgaaatcccaagtggccacaccatcaatctcttgagatggtgcga 504 ||||| ||||| ||||| || |||||| | |||||||| || || |||||||||||||| Sbjct: 7718 atgtctgatgtcgatgagattccaagtagacacaccattaaccttttgagatggtgcga 7776
>ref|NM_113670.3| Arabidopsis thaliana acetylglucosaminyltransferase/ transferase, transferring glycosyl groups AT3G27540 mRNA, complete cds Length = 1772 Score = 44.1 bits (22), Expect = 0.50 Identities = 52/62 (83%) Strand = Plus / Plus Query: 440 ttgatcatgtcagatgttgatgaaatcccaagtggccacaccatcaatctcttgagatgg 499 ||||| ||||| ||||||||||| || || |||| || || |||||||| ||||||||| Sbjct: 812 ttgataatgtctgatgttgatgagattcctagtgctcatactatcaatcttttgagatgg 871 Query: 500 tg 501 || Sbjct: 872 tg 873
>gb|AC098711.2| Mus musculus BAC clone RP23-1M11 from 13, complete sequence Length = 204508 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 436 catattgatcatgtcagatgtt 457 |||||||||||||||||||||| Sbjct: 156646 catattgatcatgtcagatgtt 156667
>gb|BT000311.1| Arabidopsis thaliana unknown protein (At3g27540) mRNA, complete cds Length = 1432 Score = 44.1 bits (22), Expect = 0.50 Identities = 52/62 (83%) Strand = Plus / Plus Query: 440 ttgatcatgtcagatgttgatgaaatcccaagtggccacaccatcaatctcttgagatgg 499 ||||| ||||| ||||||||||| || || |||| || || |||||||| ||||||||| Sbjct: 631 ttgataatgtctgatgttgatgagattcctagtgctcatactatcaatcttttgagatgg 690 Query: 500 tg 501 || Sbjct: 691 tg 692
>gb|AE012048.1| Xanthomonas axonopodis pv. citri str. 306, section 426 of 469 of the complete genome Length = 12239 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 135 cgccgtgttttcgatgctgtgc 156 |||||||||||||||||||||| Sbjct: 977 cgccgtgttttcgatgctgtgc 998
>gb|AY099829.1| Arabidopsis thaliana unknown protein (At3g27540) mRNA, complete cds Length = 1717 Score = 44.1 bits (22), Expect = 0.50 Identities = 52/62 (83%) Strand = Plus / Plus Query: 440 ttgatcatgtcagatgttgatgaaatcccaagtggccacaccatcaatctcttgagatgg 499 ||||| ||||| ||||||||||| || || |||| || || |||||||| ||||||||| Sbjct: 757 ttgataatgtctgatgttgatgagattcctagtgctcatactatcaatcttttgagatgg 816 Query: 500 tg 501 || Sbjct: 817 tg 818
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 129 accccacgccgtgttttcgatgctgtgctcttcagtaatgagcttgatat 178 ||||| |||||||| || || || || |||||||||||||| |||||||| Sbjct: 25918259 acccctcgccgtgtctttgacgccgtcctcttcagtaatgaacttgatat 25918308
>emb|BX824115.1|CNS0A5JW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH23ZD10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1682 Score = 44.1 bits (22), Expect = 0.50 Identities = 52/62 (83%) Strand = Plus / Plus Query: 440 ttgatcatgtcagatgttgatgaaatcccaagtggccacaccatcaatctcttgagatgg 499 ||||| ||||| ||||||||||| || || |||| || || |||||||| ||||||||| Sbjct: 811 ttgataatgtctgatgttgatgagattcctagtgctcatactatcaatcttttgagatgg 870 Query: 500 tg 501 || Sbjct: 871 tg 872
>emb|AL928668.7| Zebrafish DNA sequence from clone CH211-208M1, complete sequence Length = 241975 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 145 tcgatgctgtgctcttcagtaa 166 |||||||||||||||||||||| Sbjct: 65395 tcgatgctgtgctcttcagtaa 65374
>dbj|AB025626.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MMJ24 Length = 54452 Score = 44.1 bits (22), Expect = 0.50 Identities = 52/62 (83%) Strand = Plus / Plus Query: 440 ttgatcatgtcagatgttgatgaaatcccaagtggccacaccatcaatctcttgagatgg 499 ||||| ||||| ||||||||||| || || |||| || || |||||||| ||||||||| Sbjct: 35659 ttgataatgtctgatgttgatgagattcctagtgctcatactatcaatcttttgagatgg 35718 Query: 500 tg 501 || Sbjct: 35719 tg 35720
>dbj|AK101128.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025O17, full insert sequence Length = 2006 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 129 accccacgccgtgttttcgatgctgtgctcttcagtaatgagcttgatat 178 ||||| |||||||| || || || || |||||||||||||| |||||||| Sbjct: 792 acccctcgccgtgtctttgacgccgtcctcttcagtaatgaacttgatat 841
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Plus Query: 129 accccacgccgtgttttcgatgctgtgctcttcagtaatgagcttgatat 178 ||||| |||||||| || || || || |||||||||||||| |||||||| Sbjct: 25846435 acccctcgccgtgtctttgacgccgtcctcttcagtaatgaacttgatat 25846484
>emb|AL713934.5|CNS07YPF Oryza sativa chromosome 12, . Partial sequence from BAC OJ1257_B09 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 61296 Score = 44.1 bits (22), Expect = 0.50 Identities = 43/50 (86%) Strand = Plus / Minus Query: 129 accccacgccgtgttttcgatgctgtgctcttcagtaatgagcttgatat 178 ||||| |||||||| || || || || |||||||||||||| |||||||| Sbjct: 57030 acccctcgccgtgtctttgacgccgtcctcttcagtaatgaacttgatat 56981
>gb|AC093555.2| Homo sapiens chromosome 3 clone RP11-30A19, complete sequence Length = 163790 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 448 gtcagatgttgatgaaatccc 468 ||||||||||||||||||||| Sbjct: 88260 gtcagatgttgatgaaatccc 88280
>gb|AC160982.5| Mus musculus BAC clone RP23-351J19 from chromosome 12, complete sequence Length = 231693 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 248 tttcactggcgtgataaagccact 271 ||||||||| |||||||||||||| Sbjct: 18384 tttcactggagtgataaagccact 18361
>gb|AF217490.1|AF217491S3 Homo sapiens fragile 16D oxido reductase (FOR) gene, exons 8, 9, and partial cds Length = 270752 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 ccaactcaactttcactggc 257 |||||||||||||||||||| Sbjct: 157843 ccaactcaactttcactggc 157862
>gb|AY687989.1| Cortaderia jubata tRNA-Ser (trnS), ribosomal protein S4, and tRNA-Thr (trnT) genes, complete sequence; chloroplast Length = 1241 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 450 cagatgttgatgaaatccca 469 |||||||||||||||||||| Sbjct: 1059 cagatgttgatgaaatccca 1040
>gb|AY687988.1| Cortaderia selloana tRNA-Ser (trnS), ribosomal protein S4, tRNA-Thr (trnT) genes, complete sequence; chloroplast Length = 1241 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 450 cagatgttgatgaaatccca 469 |||||||||||||||||||| Sbjct: 1059 cagatgttgatgaaatccca 1040
>gb|AY518308.1| Mus musculus strain C57BL/6J guanine nucleotide-binding protein alpha subunit (Gnas) gene, exons 8, 9 and partial cds Length = 398 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 aagtcagggagaccccacgc 137 |||||||||||||||||||| Sbjct: 371 aagtcagggagaccccacgc 352
>gb|AY518307.1| Mus musculus strain BALB/c guanine nucleotide-binding protein alpha subunit (Gnas) gene, exons 8, 9 and partial cds Length = 398 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 aagtcagggagaccccacgc 137 |||||||||||||||||||| Sbjct: 371 aagtcagggagaccccacgc 352
>gb|AY518306.1| Mus musculus strain 129Sv guanine nucleotide-binding protein alpha subunit (Gnas) gene, exons 8, 9 and partial cds Length = 398 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 aagtcagggagaccccacgc 137 |||||||||||||||||||| Sbjct: 371 aagtcagggagaccccacgc 352
>gb|AY518305.1| Mus musculus strain FVB/N guanine nucleotide-binding protein alpha subunit (Gnas) gene, exons 8, 9 and partial cds Length = 398 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 aagtcagggagaccccacgc 137 |||||||||||||||||||| Sbjct: 371 aagtcagggagaccccacgc 352
>gb|AC004855.1| Homo sapiens PAC clone RP4-673O11 from 7, complete sequence Length = 74816 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 548 tactcatttgagttttttct 567 |||||||||||||||||||| Sbjct: 54123 tactcatttgagttttttct 54142
>emb|CR407585.14| Zebrafish DNA sequence from clone CH211-141O18 in linkage group 6, complete sequence Length = 164483 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 147 gatgctgtgctcttcagtaa 166 |||||||||||||||||||| Sbjct: 66332 gatgctgtgctcttcagtaa 66313
>gb|AF450245.1| Mus musculus clone BAC199M11, complete sequence Length = 124254 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 248 tttcactggcgtgataaagccact 271 ||||||||| |||||||||||||| Sbjct: 96471 tttcactggagtgataaagccact 96494
>gb|AC142331.1| Pan troglodytes BAC clone RP43-28J15 from 7, complete sequence Length = 140363 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 548 tactcatttgagttttttct 567 |||||||||||||||||||| Sbjct: 127560 tactcatttgagttttttct 127541
>gb|AC145774.1| Pan troglodytes BAC clone RP43-160F1 from 7, complete sequence Length = 208178 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 548 tactcatttgagttttttct 567 |||||||||||||||||||| Sbjct: 130409 tactcatttgagttttttct 130390
>emb|AL596210.20| Human DNA sequence from clone RP11-92O17 on chromosome 1 Contains part of the CAMTA1 gene for calmodulin binding transcription activator 1, complete sequence Length = 107112 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 atgggtggaaagtcagggag 128 |||||||||||||||||||| Sbjct: 42336 atgggtggaaagtcagggag 42355
>emb|CR407558.22| Zebrafish DNA sequence from clone CH211-107M8 in linkage group 8, complete sequence Length = 175706 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 gatgctgtgctcttcagtaa 166 |||||||||||||||||||| Sbjct: 147935 gatgctgtgctcttcagtaa 147954
>ref|XM_775479.1| PREDICTED: Strongylocentrotus purpuratus similar to fetal Alzheimer antigen isoform 2 (LOC575060), mRNA Length = 10259 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 443 atcatgtcagatgttgatgaaatc 466 ||||||||||||| |||||||||| Sbjct: 9072 atcatgtcagatggtgatgaaatc 9095
>emb|AL593857.10| Mouse DNA sequence from clone RP23-439H2 on chromosome 2, complete sequence Length = 206452 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 aagtcagggagaccccacgc 137 |||||||||||||||||||| Sbjct: 201743 aagtcagggagaccccacgc 201724
>gb|AC147976.3| Pan troglodytes BAC clone CH251-543E22 from chromosome 7, complete sequence Length = 231294 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 548 tactcatttgagttttttct 567 |||||||||||||||||||| Sbjct: 62484 tactcatttgagttttttct 62503
>gb|AC046158.6| Homo sapiens chromosome 16 clone RP11-264L1, complete sequence Length = 150361 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 ccaactcaactttcactggc 257 |||||||||||||||||||| Sbjct: 131713 ccaactcaactttcactggc 131732
>emb|AL929537.17| Mouse DNA sequence from clone RP23-147E9 on chromosome 2, complete sequence Length = 93822 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 118 aagtcagggagaccccacgc 137 |||||||||||||||||||| Sbjct: 11965 aagtcagggagaccccacgc 11984
>gb|AC161112.5| Mus musculus BAC clone RP24-468O24 from chromosome 12, complete sequence Length = 217434 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 248 tttcactggcgtgataaagccact 271 ||||||||| |||||||||||||| Sbjct: 126804 tttcactggagtgataaagccact 126781 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,418,933 Number of Sequences: 3902068 Number of extensions: 4418933 Number of successful extensions: 74419 Number of sequences better than 10.0: 56 Number of HSP's better than 10.0 without gapping: 56 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 74208 Number of HSP's gapped (non-prelim): 170 length of query: 574 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 551 effective length of database: 17,143,297,704 effective search space: 9445957034904 effective search space used: 9445957034904 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)