ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd24e07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1emb|X80266.1|HVGTIPP H.vulgare mRNA for gamma-TIP-like protein 422 e-115
2gb|U86762.1|TAU86762 Triticum aestivum gamma-type tonoplast intr... 64 2e-07
3gb|AC020922.9| Homo sapiens chromosome 19 clone CTD-2105E13, com... 46 0.058
4gb|AY207429.1| Homo sapiens interleukin 11 (IL11) gene, complete... 46 0.058
5gb|M81890.1|HUMIL11A Human interleukin 11 (IL11) gene, complete ... 46 0.058
6ref|XM_851400.1| PREDICTED: Canis familiaris similar to actinin,... 44 0.23
7ref|XM_536333.2| PREDICTED: Canis familiaris similar to actinin,... 44 0.23
8ref|XM_851314.1| PREDICTED: Canis familiaris similar to actinin,... 44 0.23
9ref|XM_851274.1| PREDICTED: Canis familiaris similar to actinin,... 44 0.23
10ref|XM_851189.1| PREDICTED: Canis familiaris similar to actinin,... 44 0.23
11ref|XM_851152.1| PREDICTED: Canis familiaris similar to actinin,... 44 0.23
12ref|XM_851023.1| PREDICTED: Canis familiaris similar to actinin,... 44 0.23
13gb|AC154709.2| Mus musculus BAC clone RP24-357I4 from chromosome... 42 0.90
14gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 0.90
15emb|CT025679.5| Mouse DNA sequence from clone RP24-296K22 on chr... 42 0.90
16gb|AC123532.4| Mus musculus chromosome 14 clone RP23-84B6, compl... 42 0.90
17gb|AC098877.3| Mus musculus BAC clone RP23-2C24 from 14, complet... 42 0.90
18gb|AC104099.5| Mus musculus BAC clone RP24-372J8 from 3, complet... 42 0.90
19gb|BC012214.1| Mus musculus Rab geranylgeranyl transferase, a su... 42 0.90
20gb|AY258323.1| Rubella virus strain BRD-II, complete genome 42 0.90
21ref|NM_019519.1| Mus musculus Rab geranylgeranyl transferase, a ... 42 0.90
22emb|AL390091.1|NCB12F1 Neurospora crassa DNA linkage group II BA... 42 0.90
23emb|BX470185.18| Zebrafish DNA sequence from clone CH211-222D3 i... 42 0.90
24dbj|AK146917.1| Mus musculus 17 days embryo kidney cDNA, RIKEN f... 42 0.90
25dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.90
26gb|AC135495.2| Oryza sativa (japonica cultivar-group) chromosome... 42 0.90
27ref|NM_214226.1| Sus scrofa inositol(1,3,4,5)tetrakisphosphate r... 42 0.90
28gb|AF127662.1|AF127662 Mus musculus strain C57BL/6J-gm/gm RAB ge... 42 0.90
29gb|AF127661.1|AF127661 Mus musculus strain C57BL/6J-gm/gm RAB ge... 42 0.90
30gb|AF127660.1|AF127660 Mus musculus strain C57BL/6J RAB geranylg... 42 0.90
31gb|AF127659.1|AF127659 Mus musculus strain C57BL/6J-gm/gm RAB ge... 42 0.90
32gb|AF127658.1|AF127658 Mus musculus strain C57BL/6J RAB geranylg... 42 0.90
33gb|AF127657.1|AF127657 Mus musculus strain C57BL/6J-gm/gm RAB ge... 42 0.90
34gb|AF127656.1|AF127656 Mus musculus strain C57BL/6J RAB geranylg... 42 0.90
35gb|AF127655.1|AF127655 Mus musculus strain C57BL/6J-gm/gm RAB ge... 42 0.90
36gb|AF127654.1|AF127654 Mus musculus strain C57BL/6J RAB geranylg... 42 0.90
37emb|AL845372.6| Zebrafish DNA sequence from clone DKEYP-113C1 in... 42 0.90
38emb|CR381567.9| Zebrafish DNA sequence from clone DKEY-115O4 in ... 42 0.90
39gb|AC159324.2| Mus musculus BAC clone RP23-9D1 from chromosome 1... 42 0.90
40gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 42 0.90
41emb|CR974568.14| Mouse DNA sequence from clone RP23-39N20 on chr... 42 0.90
42emb|CR388420.19| Zebrafish DNA sequence from clone DKEY-37H18 in... 42 0.90
43gb|U88368.1|SSU88368 Sus scrofa inositol(1,3,4,5)tetrakisphospha... 42 0.90
44gb|L07320.1|HS5E1A Murine cytomegalovirus e1 protein gene, compl... 42 0.90
45gb|AC164878.2| Mus musculus BAC clone RP23-364G24 from chromosom... 40 3.6
46gb|AC162034.6| Mus musculus chromosome 7, clone RP23-285B12, com... 40 3.6
47gb|DQ215783.1| Taeniopygia guttata clone 0058P0012B09 proteasome... 40 3.6
48gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, comple... 40 3.6
49emb|CR847515.10| Zebrafish DNA sequence from clone DKEYP-60A7 in... 40 3.6
50gb|AC012596.4| Homo sapiens BAC clone CTD-2523K17 from 7, comple... 40 3.6
51gb|AY225468.1| Mus musculus interleukin 11 gene, promoter region... 40 3.6
52emb|AL161740.16| Human DNA sequence from clone RP6-239D12 on chr... 40 3.6
53gb|AF486513.1| Hordeum vulgare cultivar Yon M Kei GBSSI gene, pr... 40 3.6
54gb|AF486512.1| Hordeum vulgare cultivar CDC Alamo GBSSI gene, pr... 40 3.6
55gb|AF486508.1| Hordeum vulgare cultivar Oderbrucker GBSSI gene, ... 40 3.6
56emb|BX897736.7| Zebrafish DNA sequence from clone CH211-181B15 i... 40 3.6
57gb|AC023310.4| Homo sapiens chromosome 15, clone RP11-336L20, co... 40 3.6
58tpg|BK001890.1| TPA: TPA_inf: Drosophila melanogaster HDC08154 (... 40 3.6
59dbj|AB118808.1| Hordeum vulgare subsp. spontaneum GBSSI gene for... 40 3.6
60dbj|AB089162.1| Hordeum vulgare subsp. vulgare GBSSI gene for gr... 40 3.6
61dbj|AB088761.1| Hordeum vulgare subsp. vulgare GBSSI gene for gr... 40 3.6
62gb|AC100757.2| Homo sapiens chromosome 15, clone RP11-566K19, co... 40 3.6
63gb|AC107487.1| Drosophila melanogaster 3L BAC RP98-10D20 (Roswel... 40 3.6
64emb|BX548249.13| Zebrafish DNA sequence from clone CH211-93A2 in... 40 3.6
65emb|BX119977.10| Zebrafish DNA sequence from clone CH211-198A3 i... 40 3.6
66gb|AF022186.2|AF022186 Cyanidium caldarium strain RK1 chloroplas... 40 3.6
67gb|AC136687.6| Homo sapiens chromosome 15, clone RP11-439M15, co... 40 3.6
68gb|AC134393.6| Homo sapiens chromosome 15, clone CTC-803A3, comp... 40 3.6
69gb|AC131280.9| Homo sapiens chromosome 15, clone RP11-467L19, co... 40 3.6
70dbj|AB154356.1| Hordeum vulgare subsp. spontaneum GBSSI gene for... 40 3.6
71dbj|AB118809.1| Hordeum vulgare subsp. spontaneum GBSSI gene for... 40 3.6
72emb|X07932.1|HVWAXYR Barley mRNA pcwx27 for waxy locus 40 3.6
73emb|X07931.1|HVWAXYG Barley DNA for waxy locus encoding starch s... 40 3.6
74emb|AL929340.4| Zebrafish DNA sequence from clone CH211-248N16 i... 40 3.6
75gb|AE003476.3| Drosophila melanogaster chromosome 3L, section 10... 40 3.6
76gb|AC116680.21| Mus musculus chromosome 12, clone RP23-476M16, c... 40 3.6
77gb|U68299.1|MCU68299 Mouse cytomegalovirus 1 complete genomic se... 40 3.6
78emb|CR388150.14| Zebrafish DNA sequence from clone DKEY-115A2 in... 40 3.6
79dbj|AB054056.1| Hordeum vulgare waxy gene, partial sequence, cul... 40 3.6
80dbj|AB054055.2| Hordeum vulgare waxy gene, partial sequence, cul... 40 3.6
81emb|AL772162.4| Mouse DNA sequence from clone RP23-175J8 on chro... 40 3.6

>emb|X80266.1|HVGTIPP H.vulgare mRNA for gamma-TIP-like protein
          Length = 1020

 Score =  422 bits (213), Expect = e-115
 Identities = 227/229 (99%), Gaps = 2/229 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    agctccccaccaccgnactactaaggctcaccgccgcctgccccccgcccgcccgtccgt 60
            ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 794  agctccccaccaccg-actactaag-ctcaccgccgcctgccccccgcccgcccgtccgt 851

                                                                        
Query: 61   ccgtgtggtcgatcgcgtctccccttgcttccagtcatgagtcgtttaagtttgctttga 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 852  ccgtgtggtcgatcgcgtctccccttgcttccagtcatgagtcgtttaagtttgctttga 911

                                                                        
Query: 121  atgaatgaatccatcccattcccagggtcgatcggtccatcagtttgtggtgctgtgaaa 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 912  atgaatgaatccatcccattcccagggtcgatcggtccatcagtttgtggtgctgtgaaa 971

                                                             
Query: 181  cctgtgacgatcgaccctgtcaatttgcttgtgtaaaacctgtgaattc 229
            |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 972  cctgtgacgatcgaccctgtcaatttgcttgtgtaaaacctgtgaattc 1020



to top

>gb|U86762.1|TAU86762 Triticum aestivum gamma-type tonoplast intrinsic protein mRNA,
            complete cds
          Length = 1133

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 66/76 (86%), Gaps = 6/76 (7%)
 Strand = Plus / Plus

                                                                        
Query: 192  cgaccctgtcaatttgcttgtgtaaaacctgtgaattcg-----tccgcccgagtaattt 246
            |||| |||||||||||||| ||||||| |||||||||||      |||||||||||||||
Sbjct: 1027 cgacactgtcaatttgcttctgtaaaa-ctgtgaattcgcccgtcccgcccgagtaattt 1085

                            
Query: 247  caagttcagttgagtt 262
            |||||| |||||||||
Sbjct: 1086 caagttgagttgagtt 1101



 Score = 44.1 bits (22), Expect = 0.23
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 96  catgagtcgtttaagtttgctt 117
           ||||||||||||||||||||||
Sbjct: 956 catgagtcgtttaagtttgctt 977



to top

>gb|AC020922.9| Homo sapiens chromosome 19 clone CTD-2105E13, complete sequence
          Length = 134793

 Score = 46.1 bits (23), Expect = 0.058
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 33    gccgcctgccccccgcccgcccg 55
             |||||||||||||||||||||||
Sbjct: 78811 gccgcctgccccccgcccgcccg 78789



to top

>gb|AY207429.1| Homo sapiens interleukin 11 (IL11) gene, complete cds
          Length = 9803

 Score = 46.1 bits (23), Expect = 0.058
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 33   gccgcctgccccccgcccgcccg 55
            |||||||||||||||||||||||
Sbjct: 1427 gccgcctgccccccgcccgcccg 1449



to top

>gb|M81890.1|HUMIL11A Human interleukin 11 (IL11) gene, complete mRNA
          Length = 6870

 Score = 46.1 bits (23), Expect = 0.058
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 33  gccgcctgccccccgcccgcccg 55
           |||||||||||||||||||||||
Sbjct: 666 gccgcctgccccccgcccgcccg 688



to top

>ref|XM_851400.1| PREDICTED: Canis familiaris similar to actinin, alpha 2, transcript
           variant 11 (LOC479191), mRNA
          Length = 4681

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 31  ccgccgcctgccccccgcccgcccgtccgtccgt 64
           |||||||| || ||||||| ||||||||||||||
Sbjct: 91  ccgccgcccgcgccccgccggcccgtccgtccgt 124



to top

>ref|XM_536333.2| PREDICTED: Canis familiaris similar to actinin, alpha 2, transcript
           variant 1 (LOC479191), mRNA
          Length = 4681

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 31  ccgccgcctgccccccgcccgcccgtccgtccgt 64
           |||||||| || ||||||| ||||||||||||||
Sbjct: 91  ccgccgcccgcgccccgccggcccgtccgtccgt 124



to top

>ref|XM_851314.1| PREDICTED: Canis familiaris similar to actinin, alpha 2, transcript
           variant 10 (LOC479191), mRNA
          Length = 4663

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 31  ccgccgcctgccccccgcccgcccgtccgtccgt 64
           |||||||| || ||||||| ||||||||||||||
Sbjct: 91  ccgccgcccgcgccccgccggcccgtccgtccgt 124



to top

>ref|XM_851274.1| PREDICTED: Canis familiaris similar to actinin, alpha 2, transcript
           variant 9 (LOC479191), mRNA
          Length = 4438

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 31  ccgccgcctgccccccgcccgcccgtccgtccgt 64
           |||||||| || ||||||| ||||||||||||||
Sbjct: 91  ccgccgcccgcgccccgccggcccgtccgtccgt 124



to top

>ref|XM_851189.1| PREDICTED: Canis familiaris similar to actinin, alpha 2, transcript
           variant 7 (LOC479191), mRNA
          Length = 4777

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 31  ccgccgcctgccccccgcccgcccgtccgtccgt 64
           |||||||| || ||||||| ||||||||||||||
Sbjct: 91  ccgccgcccgcgccccgccggcccgtccgtccgt 124



to top

>ref|XM_851152.1| PREDICTED: Canis familiaris similar to actinin, alpha 2, transcript
           variant 6 (LOC479191), mRNA
          Length = 4696

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 31  ccgccgcctgccccccgcccgcccgtccgtccgt 64
           |||||||| || ||||||| ||||||||||||||
Sbjct: 91  ccgccgcccgcgccccgccggcccgtccgtccgt 124



to top

>ref|XM_851023.1| PREDICTED: Canis familiaris similar to actinin, alpha 2, transcript
           variant 3 (LOC479191), mRNA
          Length = 4681

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 31  ccgccgcctgccccccgcccgcccgtccgtccgt 64
           |||||||| || ||||||| ||||||||||||||
Sbjct: 91  ccgccgcccgcgccccgccggcccgtccgtccgt 124



to top

>gb|AC154709.2| Mus musculus BAC clone RP24-357I4 from chromosome 12, complete sequence
          Length = 136354

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 44    cccgcccgcccgtccgtccgt 64
             |||||||||||||||||||||
Sbjct: 94104 cccgcccgcccgtccgtccgt 94084



to top

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 44      cccgcccgcccgtccgtccgt 64
               |||||||||||||||||||||
Sbjct: 8319499 cccgcccgcccgtccgtccgt 8319519



to top

>emb|CT025679.5| Mouse DNA sequence from clone RP24-296K22 on chromosome 14, complete
              sequence
          Length = 160805

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 44     cccgcccgcccgtccgtccgt 64
              |||||||||||||||||||||
Sbjct: 155935 cccgcccgcccgtccgtccgt 155955



to top

>gb|AC123532.4| Mus musculus chromosome 14 clone RP23-84B6, complete sequence
          Length = 166421

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 44   cccgcccgcccgtccgtccgt 64
            |||||||||||||||||||||
Sbjct: 7826 cccgcccgcccgtccgtccgt 7846



to top

>gb|AC098877.3| Mus musculus BAC clone RP23-2C24 from 14, complete sequence
          Length = 240151

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 44    cccgcccgcccgtccgtccgt 64
             |||||||||||||||||||||
Sbjct: 37953 cccgcccgcccgtccgtccgt 37973



to top

>gb|AC104099.5| Mus musculus BAC clone RP24-372J8 from 3, complete sequence
          Length = 148259

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 44    cccgcccgcccgtccgtccgt 64
             |||||||||||||||||||||
Sbjct: 37489 cccgcccgcccgtccgtccgt 37509



 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 44    cccgcccgcccgtccgtccgtgtg 67
             |||||||| |||||||||||||||
Sbjct: 37493 cccgcccgtccgtccgtccgtgtg 37516



to top

>gb|BC012214.1| Mus musculus Rab geranylgeranyl transferase, a subunit, mRNA
          (cDNA clone MGC:19255 IMAGE:3967218), complete cds
          Length = 2176

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 44 cccgcccgcccgtccgtccgt 64
          |||||||||||||||||||||
Sbjct: 43 cccgcccgcccgtccgtccgt 23



to top

>gb|AY258323.1| Rubella virus strain BRD-II, complete genome
          Length = 9778

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 31   ccgccgcctgccccccgcccgcccg 55
            ||||||||||||||| |||||||||
Sbjct: 2303 ccgccgcctgcccccagcccgcccg 2327



to top

>ref|NM_019519.1| Mus musculus Rab geranylgeranyl transferase, a subunit (Rabggta),
          mRNA
          Length = 2547

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 44 cccgcccgcccgtccgtccgt 64
          |||||||||||||||||||||
Sbjct: 38 cccgcccgcccgtccgtccgt 18



to top

>emb|AL390091.1|NCB12F1 Neurospora crassa DNA linkage group II BAC clone B12F1
          Length = 68478

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 44    cccgcccgcccgtccgtccgt 64
             |||||||||||||||||||||
Sbjct: 42914 cccgcccgcccgtccgtccgt 42894



 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 44    cccgcccgcccgtccgtccgtgtg 67
             |||||||| |||||||||||||||
Sbjct: 42910 cccgcccgtccgtccgtccgtgtg 42887



to top

>emb|BX470185.18| Zebrafish DNA sequence from clone CH211-222D3 in linkage group 3,
             complete sequence
          Length = 198900

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 44    cccgcccgcccgtccgtccgt 64
             |||||||||||||||||||||
Sbjct: 27596 cccgcccgcccgtccgtccgt 27616



to top

>dbj|AK146917.1| Mus musculus 17 days embryo kidney cDNA, RIKEN full-length
          enriched library, clone:I920074L06 product:Rab
          geranylgeranyl transferase, a subunit, full insert
          sequence
          Length = 2422

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 44 cccgcccgcccgtccgtccgt 64
          |||||||||||||||||||||
Sbjct: 61 cccgcccgcccgtccgtccgt 41



to top

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 44      cccgcccgcccgtccgtccgt 64
               |||||||||||||||||||||
Sbjct: 8317334 cccgcccgcccgtccgtccgt 8317354



to top

>gb|AC135495.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1664B11,
             complete sequence
          Length = 126040

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 44    cccgcccgcccgtccgtccgt 64
             |||||||||||||||||||||
Sbjct: 56755 cccgcccgcccgtccgtccgt 56775



to top

>ref|NM_214226.1| Sus scrofa inositol(1,3,4,5)tetrakisphosphate receptor (CENTA1),
          mRNA
          Length = 1544

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                   
Query: 39 tgccccccgcccgcccgtccgtccg 63
          |||| ||||||||||||||||||||
Sbjct: 80 tgccgcccgcccgcccgtccgtccg 56



to top

>gb|AF127662.1|AF127662 Mus musculus strain C57BL/6J-gm/gm RAB geranylgeranyl transferase
          alpha subunit (Rabggta) mRNA, complete cds,
          alternatively spliced
          Length = 2466

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 44 cccgcccgcccgtccgtccgt 64
          |||||||||||||||||||||
Sbjct: 38 cccgcccgcccgtccgtccgt 18



to top

>gb|AF127661.1|AF127661 Mus musculus strain C57BL/6J-gm/gm RAB geranylgeranyl transferase
          alpha subunit (Rabggta) pseudogene, complete sequence
          Length = 2435

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 44 cccgcccgcccgtccgtccgt 64
          |||||||||||||||||||||
Sbjct: 38 cccgcccgcccgtccgtccgt 18



to top

>gb|AF127660.1|AF127660 Mus musculus strain C57BL/6J RAB geranylgeranyl transferase alpha
          subunit (Rabggta) mRNA, complete cds, alternatively
          spliced
          Length = 2492

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 44 cccgcccgcccgtccgtccgt 64
          |||||||||||||||||||||
Sbjct: 38 cccgcccgcccgtccgtccgt 18



to top

>gb|AF127659.1|AF127659 Mus musculus strain C57BL/6J-gm/gm RAB geranylgeranyl transferase
          alpha subunit (Rabggta) mRNA, complete cds,
          alternatively spliced
          Length = 2547

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 44 cccgcccgcccgtccgtccgt 64
          |||||||||||||||||||||
Sbjct: 38 cccgcccgcccgtccgtccgt 18



to top

>gb|AF127658.1|AF127658 Mus musculus strain C57BL/6J RAB geranylgeranyl transferase alpha
          subunit (Rabggta) mRNA, complete cds, alternatively
          spliced
          Length = 2547

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 44 cccgcccgcccgtccgtccgt 64
          |||||||||||||||||||||
Sbjct: 38 cccgcccgcccgtccgtccgt 18



to top

>gb|AF127657.1|AF127657 Mus musculus strain C57BL/6J-gm/gm RAB geranylgeranyl transferase
          alpha subunit (Rabggta) pseudogene, complete sequence
          Length = 2338

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 44 cccgcccgcccgtccgtccgt 64
          |||||||||||||||||||||
Sbjct: 38 cccgcccgcccgtccgtccgt 18



to top

>gb|AF127656.1|AF127656 Mus musculus strain C57BL/6J RAB geranylgeranyl transferase alpha
          subunit (Rabggta) mRNA, complete cds, alternatively
          spliced
          Length = 2395

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 44 cccgcccgcccgtccgtccgt 64
          |||||||||||||||||||||
Sbjct: 38 cccgcccgcccgtccgtccgt 18



to top

>gb|AF127655.1|AF127655 Mus musculus strain C57BL/6J-gm/gm RAB geranylgeranyl transferase
          alpha subunit (Rabggta) gene, complete cds,
          alternatively spliced
          Length = 2685

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 44 cccgcccgcccgtccgtccgt 64
          |||||||||||||||||||||
Sbjct: 38 cccgcccgcccgtccgtccgt 18



to top

>gb|AF127654.1|AF127654 Mus musculus strain C57BL/6J RAB geranylgeranyl transferase alpha
          subunit (Rabggta) gene, complete cds, alternatively
          spliced
          Length = 2685

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 44 cccgcccgcccgtccgtccgt 64
          |||||||||||||||||||||
Sbjct: 38 cccgcccgcccgtccgtccgt 18



to top

>emb|AL845372.6| Zebrafish DNA sequence from clone DKEYP-113C1 in linkage group 20,
             complete sequence
          Length = 80017

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 44    cccgcccgcccgtccgtccgt 64
             |||||||||||||||||||||
Sbjct: 44988 cccgcccgcccgtccgtccgt 44968



to top

>emb|CR381567.9| Zebrafish DNA sequence from clone DKEY-115O4 in linkage group 23,
             complete sequence
          Length = 142417

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 44    cccgcccgcccgtccgtccgt 64
             |||||||||||||||||||||
Sbjct: 45151 cccgcccgcccgtccgtccgt 45131



to top

>gb|AC159324.2| Mus musculus BAC clone RP23-9D1 from chromosome 12, complete sequence
          Length = 207280

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 44    cccgcccgcccgtccgtccgt 64
             |||||||||||||||||||||
Sbjct: 13780 cccgcccgcccgtccgtccgt 13760



to top

>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 29      caccgccgcctgccccccgcccgcc 53
               ||||||||| |||||||||||||||
Sbjct: 2074480 caccgccgcatgccccccgcccgcc 2074504



to top

>emb|CR974568.14| Mouse DNA sequence from clone RP23-39N20 on chromosome 12, complete
              sequence
          Length = 251037

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 44     cccgcccgcccgtccgtccgt 64
              |||||||||||||||||||||
Sbjct: 108721 cccgcccgcccgtccgtccgt 108741



to top

>emb|CR388420.19| Zebrafish DNA sequence from clone DKEY-37H18 in linkage group 13,
             complete sequence
          Length = 121689

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 44    cccgcccgcccgtccgtccgt 64
             |||||||||||||||||||||
Sbjct: 73131 cccgcccgcccgtccgtccgt 73151



to top

>gb|U88368.1|SSU88368 Sus scrofa inositol(1,3,4,5)tetrakisphosphate receptor mRNA,
          complete cds
          Length = 1544

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                   
Query: 39 tgccccccgcccgcccgtccgtccg 63
          |||| ||||||||||||||||||||
Sbjct: 80 tgccgcccgcccgcccgtccgtccg 56



to top

>gb|L07320.1|HS5E1A Murine cytomegalovirus e1 protein gene, complete cds
          Length = 4536

 Score = 42.1 bits (21), Expect = 0.90
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 44  cccgcccgcccgtccgtccgt 64
           |||||||||||||||||||||
Sbjct: 765 cccgcccgcccgtccgtccgt 745



to top

>gb|AC164878.2| Mus musculus BAC clone RP23-364G24 from chromosome 13, complete
             sequence
          Length = 181893

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 45    ccgcccgcccgtccgtccgt 64
             ||||||||||||||||||||
Sbjct: 94642 ccgcccgcccgtccgtccgt 94623



to top

>gb|AC162034.6| Mus musculus chromosome 7, clone RP23-285B12, complete sequence
          Length = 197907

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 36     gcctgccccccgcccgcccg 55
              ||||||||||||||||||||
Sbjct: 122700 gcctgccccccgcccgcccg 122681



to top

>gb|DQ215783.1| Taeniopygia guttata clone 0058P0012B09 proteasome alpha 1 subunit
          variant 1-like mRNA, complete sequence
          Length = 1190

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                  
Query: 32 cgccgcctgccccccgcccgcccg 55
          |||||||||||| |||||||||||
Sbjct: 15 cgccgcctgcccgccgcccgcccg 38



to top

>gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, complete sequence
          Length = 124050

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 45    ccgcccgcccgtccgtccgt 64
             ||||||||||||||||||||
Sbjct: 72202 ccgcccgcccgtccgtccgt 72221



to top

>emb|CR847515.10| Zebrafish DNA sequence from clone DKEYP-60A7 in linkage group 9, complete
              sequence
          Length = 153947

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 111    tttgctttgaatgaatgaat 130
              ||||||||||||||||||||
Sbjct: 143337 tttgctttgaatgaatgaat 143356



to top

>gb|AC012596.4| Homo sapiens BAC clone CTD-2523K17 from 7, complete sequence
          Length = 154859

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 116   tttgaatgaatgaatccatc 135
             ||||||||||||||||||||
Sbjct: 68017 tttgaatgaatgaatccatc 68036



to top

>gb|AY225468.1| Mus musculus interleukin 11 gene, promoter region and partial 5'UTR
          Length = 3811

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 36   gcctgccccccgcccgcccg 55
            ||||||||||||||||||||
Sbjct: 3600 gcctgccccccgcccgcccg 3619



to top

>emb|AL161740.16| Human DNA sequence from clone RP6-239D12 on chromosome 1p32.1-33
             Contains 3' end of the DAB1 gene for disabled homolog 1
             (Drosophila), a novel gene and the 5' end of a novel gene,
             complete sequence
          Length = 60856

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 116   tttgaatgaatgaatccatc 135
             ||||||||||||||||||||
Sbjct: 53904 tttgaatgaatgaatccatc 53885



to top

>gb|AF486513.1| Hordeum vulgare cultivar Yon M Kei GBSSI gene, promoter and 5'
           untranslated region
          Length = 1201

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 45  ccgcccgcccgtccgtccgt 64
           ||||||||||||||||||||
Sbjct: 864 ccgcccgcccgtccgtccgt 883



to top

>gb|AF486512.1| Hordeum vulgare cultivar CDC Alamo GBSSI gene, promoter and 5'
           untranslated region
          Length = 1197

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 45  ccgcccgcccgtccgtccgt 64
           ||||||||||||||||||||
Sbjct: 865 ccgcccgcccgtccgtccgt 884



to top

>gb|AF486508.1| Hordeum vulgare cultivar Oderbrucker GBSSI gene, promoter and 5'
           untranslated region
          Length = 1195

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 45  ccgcccgcccgtccgtccgt 64
           ||||||||||||||||||||
Sbjct: 863 ccgcccgcccgtccgtccgt 882



to top

>emb|BX897736.7| Zebrafish DNA sequence from clone CH211-181B15 in linkage group 17,
             complete sequence
          Length = 141987

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 118   tgaatgaatgaatccatccc 137
             ||||||||||||||||||||
Sbjct: 10020 tgaatgaatgaatccatccc 10001



to top

>gb|AC023310.4| Homo sapiens chromosome 15, clone RP11-336L20, complete sequence
          Length = 177355

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 117   ttgaatgaatgaatccatcccatt 140
             ||||||||||||||| ||||||||
Sbjct: 47384 ttgaatgaatgaatcaatcccatt 47407



to top

>tpg|BK001890.1| TPA: TPA_inf: Drosophila melanogaster HDC08154 (HDC08154) gene,
            complete cds
          Length = 1399

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 45   ccgcccgcccgtccgtccgt 64
            ||||||||||||||||||||
Sbjct: 1362 ccgcccgcccgtccgtccgt 1381



to top

>dbj|AB118808.1| Hordeum vulgare subsp. spontaneum GBSSI gene for granule bound
           starch synthase I, complete cds, strain:OUH643
          Length = 5119

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 45  ccgcccgcccgtccgtccgt 64
           ||||||||||||||||||||
Sbjct: 778 ccgcccgcccgtccgtccgt 797



to top

>dbj|AB089162.1| Hordeum vulgare subsp. vulgare GBSSI gene for granule bound starch
           synthase I
          Length = 5190

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 45  ccgcccgcccgtccgtccgt 64
           ||||||||||||||||||||
Sbjct: 803 ccgcccgcccgtccgtccgt 822



to top

>dbj|AB088761.1| Hordeum vulgare subsp. vulgare GBSSI gene for granule bound starch
           synthase I, complete cds
          Length = 5190

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 45  ccgcccgcccgtccgtccgt 64
           ||||||||||||||||||||
Sbjct: 803 ccgcccgcccgtccgtccgt 822



to top

>gb|AC100757.2| Homo sapiens chromosome 15, clone RP11-566K19, complete sequence
          Length = 171987

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 117   ttgaatgaatgaatccatcccatt 140
             ||||||||||||||| ||||||||
Sbjct: 31381 ttgaatgaatgaatcaatcccatt 31404



to top

>gb|AC107487.1| Drosophila melanogaster 3L BAC RP98-10D20 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 170900

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 45    ccgcccgcccgtccgtccgt 64
             ||||||||||||||||||||
Sbjct: 32006 ccgcccgcccgtccgtccgt 32025



to top

>emb|BX548249.13| Zebrafish DNA sequence from clone CH211-93A2 in linkage group 21,
             complete sequence
          Length = 153142

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 45    ccgcccgcccgtccgtccgt 64
             ||||||||||||||||||||
Sbjct: 66704 ccgcccgcccgtccgtccgt 66723



to top

>emb|BX119977.10| Zebrafish DNA sequence from clone CH211-198A3 in linkage group 7,
             complete sequence
          Length = 182186

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 45    ccgcccgcccgtccgtccgt 64
             ||||||||||||||||||||
Sbjct: 16590 ccgcccgcccgtccgtccgt 16609



to top

>gb|AF022186.2|AF022186 Cyanidium caldarium strain RK1 chloroplast, complete genome
          Length = 164921

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 238   gagtaatttcaagttcagtt 257
             ||||||||||||||||||||
Sbjct: 98148 gagtaatttcaagttcagtt 98129



to top

>gb|AC136687.6| Homo sapiens chromosome 15, clone RP11-439M15, complete sequence
          Length = 180708

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 117    ttgaatgaatgaatccatcccatt 140
              ||||||||||||||| ||||||||
Sbjct: 146620 ttgaatgaatgaatcaatcccatt 146597



to top

>gb|AC134393.6| Homo sapiens chromosome 15, clone CTC-803A3, complete sequence
          Length = 132353

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 117   ttgaatgaatgaatccatcccatt 140
             ||||||||||||||| ||||||||
Sbjct: 74975 ttgaatgaatgaatcaatcccatt 74998



to top

>gb|AC131280.9| Homo sapiens chromosome 15, clone RP11-467L19, complete sequence
          Length = 194754

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 117    ttgaatgaatgaatccatcccatt 140
              ||||||||||||||| ||||||||
Sbjct: 116211 ttgaatgaatgaatcaatcccatt 116188



to top

>dbj|AB154356.1| Hordeum vulgare subsp. spontaneum GBSSI gene for granule bound
           starch synthase I, complete cds
          Length = 4535

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 45  ccgcccgcccgtccgtccgt 64
           ||||||||||||||||||||
Sbjct: 381 ccgcccgcccgtccgtccgt 400



to top

>dbj|AB118809.1| Hordeum vulgare subsp. spontaneum GBSSI gene for granule bound
           starch synthase I, complete cds, strain:OUH602
          Length = 5190

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 45  ccgcccgcccgtccgtccgt 64
           ||||||||||||||||||||
Sbjct: 803 ccgcccgcccgtccgtccgt 822



to top

>emb|X07932.1|HVWAXYR Barley mRNA pcwx27 for waxy locus
          Length = 2311

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 45  ccgcccgcccgtccgtccgt 64
           ||||||||||||||||||||
Sbjct: 114 ccgcccgcccgtccgtccgt 133



to top

>emb|X07931.1|HVWAXYG Barley DNA for waxy locus encoding starch synthase (EC 2.4.1.11)
          Length = 5153

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 45  ccgcccgcccgtccgtccgt 64
           ||||||||||||||||||||
Sbjct: 919 ccgcccgcccgtccgtccgt 938



to top

>emb|AL929340.4| Zebrafish DNA sequence from clone CH211-248N16 in linkage group 20,
             complete sequence
          Length = 163231

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 45    ccgcccgcccgtccgtccgt 64
             ||||||||||||||||||||
Sbjct: 60266 ccgcccgcccgtccgtccgt 60247



to top

>gb|AE003476.3| Drosophila melanogaster chromosome 3L, section 10 of 83 of the complete
             sequence
          Length = 304419

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 45    ccgcccgcccgtccgtccgt 64
             ||||||||||||||||||||
Sbjct: 80625 ccgcccgcccgtccgtccgt 80644



to top

>gb|AC116680.21| Mus musculus chromosome 12, clone RP23-476M16, complete sequence
          Length = 215303

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 243    atttcaagttcagttgagtt 262
              ||||||||||||||||||||
Sbjct: 198065 atttcaagttcagttgagtt 198046



to top

>gb|U68299.1|MCU68299 Mouse cytomegalovirus 1 complete genomic sequence
          Length = 230278

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 45     ccgcccgcccgtccgtccgt 64
              ||||||||||||||||||||
Sbjct: 162006 ccgcccgcccgtccgtccgt 161987



to top

>emb|CR388150.14| Zebrafish DNA sequence from clone DKEY-115A2 in linkage group 3, complete
              sequence
          Length = 170964

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 45     ccgcccgcccgtccgtccgt 64
              ||||||||||||||||||||
Sbjct: 119791 ccgcccgcccgtccgtccgt 119772



to top

>dbj|AB054056.1| Hordeum vulgare waxy gene, partial sequence, cultivar:Shonupana
          Length = 802

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 45  ccgcccgcccgtccgtccgt 64
           ||||||||||||||||||||
Sbjct: 365 ccgcccgcccgtccgtccgt 384



to top

>dbj|AB054055.2| Hordeum vulgare waxy gene, partial sequence, cultivar:Senbon hadaka
          Length = 1011

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 45  ccgcccgcccgtccgtccgt 64
           ||||||||||||||||||||
Sbjct: 380 ccgcccgcccgtccgtccgt 399



to top

>emb|AL772162.4| Mouse DNA sequence from clone RP23-175J8 on chromosome 2, complete
             sequence
          Length = 100090

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 111   tttgctttgaatgaatgaat 130
             ||||||||||||||||||||
Sbjct: 53784 tttgctttgaatgaatgaat 53765


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,290,018
Number of Sequences: 3902068
Number of extensions: 2290018
Number of successful extensions: 56204
Number of sequences better than 10.0: 81
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 56020
Number of HSP's gapped (non-prelim): 183
length of query: 274
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 252
effective length of database: 17,147,199,772
effective search space: 4321094342544
effective search space used: 4321094342544
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top