| Clone Name | basd24e07 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X80266.1|HVGTIPP H.vulgare mRNA for gamma-TIP-like protein Length = 1020 Score = 422 bits (213), Expect = e-115 Identities = 227/229 (99%), Gaps = 2/229 (0%) Strand = Plus / Plus Query: 1 agctccccaccaccgnactactaaggctcaccgccgcctgccccccgcccgcccgtccgt 60 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 794 agctccccaccaccg-actactaag-ctcaccgccgcctgccccccgcccgcccgtccgt 851 Query: 61 ccgtgtggtcgatcgcgtctccccttgcttccagtcatgagtcgtttaagtttgctttga 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 852 ccgtgtggtcgatcgcgtctccccttgcttccagtcatgagtcgtttaagtttgctttga 911 Query: 121 atgaatgaatccatcccattcccagggtcgatcggtccatcagtttgtggtgctgtgaaa 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 912 atgaatgaatccatcccattcccagggtcgatcggtccatcagtttgtggtgctgtgaaa 971 Query: 181 cctgtgacgatcgaccctgtcaatttgcttgtgtaaaacctgtgaattc 229 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 972 cctgtgacgatcgaccctgtcaatttgcttgtgtaaaacctgtgaattc 1020
>gb|U86762.1|TAU86762 Triticum aestivum gamma-type tonoplast intrinsic protein mRNA, complete cds Length = 1133 Score = 63.9 bits (32), Expect = 2e-07 Identities = 66/76 (86%), Gaps = 6/76 (7%) Strand = Plus / Plus Query: 192 cgaccctgtcaatttgcttgtgtaaaacctgtgaattcg-----tccgcccgagtaattt 246 |||| |||||||||||||| ||||||| ||||||||||| ||||||||||||||| Sbjct: 1027 cgacactgtcaatttgcttctgtaaaa-ctgtgaattcgcccgtcccgcccgagtaattt 1085 Query: 247 caagttcagttgagtt 262 |||||| ||||||||| Sbjct: 1086 caagttgagttgagtt 1101 Score = 44.1 bits (22), Expect = 0.23 Identities = 22/22 (100%) Strand = Plus / Plus Query: 96 catgagtcgtttaagtttgctt 117 |||||||||||||||||||||| Sbjct: 956 catgagtcgtttaagtttgctt 977
>gb|AC020922.9| Homo sapiens chromosome 19 clone CTD-2105E13, complete sequence Length = 134793 Score = 46.1 bits (23), Expect = 0.058 Identities = 23/23 (100%) Strand = Plus / Minus Query: 33 gccgcctgccccccgcccgcccg 55 ||||||||||||||||||||||| Sbjct: 78811 gccgcctgccccccgcccgcccg 78789
>gb|AY207429.1| Homo sapiens interleukin 11 (IL11) gene, complete cds Length = 9803 Score = 46.1 bits (23), Expect = 0.058 Identities = 23/23 (100%) Strand = Plus / Plus Query: 33 gccgcctgccccccgcccgcccg 55 ||||||||||||||||||||||| Sbjct: 1427 gccgcctgccccccgcccgcccg 1449
>gb|M81890.1|HUMIL11A Human interleukin 11 (IL11) gene, complete mRNA Length = 6870 Score = 46.1 bits (23), Expect = 0.058 Identities = 23/23 (100%) Strand = Plus / Plus Query: 33 gccgcctgccccccgcccgcccg 55 ||||||||||||||||||||||| Sbjct: 666 gccgcctgccccccgcccgcccg 688
>ref|XM_851400.1| PREDICTED: Canis familiaris similar to actinin, alpha 2, transcript variant 11 (LOC479191), mRNA Length = 4681 Score = 44.1 bits (22), Expect = 0.23 Identities = 31/34 (91%) Strand = Plus / Plus Query: 31 ccgccgcctgccccccgcccgcccgtccgtccgt 64 |||||||| || ||||||| |||||||||||||| Sbjct: 91 ccgccgcccgcgccccgccggcccgtccgtccgt 124
>ref|XM_536333.2| PREDICTED: Canis familiaris similar to actinin, alpha 2, transcript variant 1 (LOC479191), mRNA Length = 4681 Score = 44.1 bits (22), Expect = 0.23 Identities = 31/34 (91%) Strand = Plus / Plus Query: 31 ccgccgcctgccccccgcccgcccgtccgtccgt 64 |||||||| || ||||||| |||||||||||||| Sbjct: 91 ccgccgcccgcgccccgccggcccgtccgtccgt 124
>ref|XM_851314.1| PREDICTED: Canis familiaris similar to actinin, alpha 2, transcript variant 10 (LOC479191), mRNA Length = 4663 Score = 44.1 bits (22), Expect = 0.23 Identities = 31/34 (91%) Strand = Plus / Plus Query: 31 ccgccgcctgccccccgcccgcccgtccgtccgt 64 |||||||| || ||||||| |||||||||||||| Sbjct: 91 ccgccgcccgcgccccgccggcccgtccgtccgt 124
>ref|XM_851274.1| PREDICTED: Canis familiaris similar to actinin, alpha 2, transcript variant 9 (LOC479191), mRNA Length = 4438 Score = 44.1 bits (22), Expect = 0.23 Identities = 31/34 (91%) Strand = Plus / Plus Query: 31 ccgccgcctgccccccgcccgcccgtccgtccgt 64 |||||||| || ||||||| |||||||||||||| Sbjct: 91 ccgccgcccgcgccccgccggcccgtccgtccgt 124
>ref|XM_851189.1| PREDICTED: Canis familiaris similar to actinin, alpha 2, transcript variant 7 (LOC479191), mRNA Length = 4777 Score = 44.1 bits (22), Expect = 0.23 Identities = 31/34 (91%) Strand = Plus / Plus Query: 31 ccgccgcctgccccccgcccgcccgtccgtccgt 64 |||||||| || ||||||| |||||||||||||| Sbjct: 91 ccgccgcccgcgccccgccggcccgtccgtccgt 124
>ref|XM_851152.1| PREDICTED: Canis familiaris similar to actinin, alpha 2, transcript variant 6 (LOC479191), mRNA Length = 4696 Score = 44.1 bits (22), Expect = 0.23 Identities = 31/34 (91%) Strand = Plus / Plus Query: 31 ccgccgcctgccccccgcccgcccgtccgtccgt 64 |||||||| || ||||||| |||||||||||||| Sbjct: 91 ccgccgcccgcgccccgccggcccgtccgtccgt 124
>ref|XM_851023.1| PREDICTED: Canis familiaris similar to actinin, alpha 2, transcript variant 3 (LOC479191), mRNA Length = 4681 Score = 44.1 bits (22), Expect = 0.23 Identities = 31/34 (91%) Strand = Plus / Plus Query: 31 ccgccgcctgccccccgcccgcccgtccgtccgt 64 |||||||| || ||||||| |||||||||||||| Sbjct: 91 ccgccgcccgcgccccgccggcccgtccgtccgt 124
>gb|AC154709.2| Mus musculus BAC clone RP24-357I4 from chromosome 12, complete sequence Length = 136354 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 44 cccgcccgcccgtccgtccgt 64 ||||||||||||||||||||| Sbjct: 94104 cccgcccgcccgtccgtccgt 94084
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Plus Query: 44 cccgcccgcccgtccgtccgt 64 ||||||||||||||||||||| Sbjct: 8319499 cccgcccgcccgtccgtccgt 8319519
>emb|CT025679.5| Mouse DNA sequence from clone RP24-296K22 on chromosome 14, complete sequence Length = 160805 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Plus Query: 44 cccgcccgcccgtccgtccgt 64 ||||||||||||||||||||| Sbjct: 155935 cccgcccgcccgtccgtccgt 155955
>gb|AC123532.4| Mus musculus chromosome 14 clone RP23-84B6, complete sequence Length = 166421 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Plus Query: 44 cccgcccgcccgtccgtccgt 64 ||||||||||||||||||||| Sbjct: 7826 cccgcccgcccgtccgtccgt 7846
>gb|AC098877.3| Mus musculus BAC clone RP23-2C24 from 14, complete sequence Length = 240151 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Plus Query: 44 cccgcccgcccgtccgtccgt 64 ||||||||||||||||||||| Sbjct: 37953 cccgcccgcccgtccgtccgt 37973
>gb|AC104099.5| Mus musculus BAC clone RP24-372J8 from 3, complete sequence Length = 148259 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Plus Query: 44 cccgcccgcccgtccgtccgt 64 ||||||||||||||||||||| Sbjct: 37489 cccgcccgcccgtccgtccgt 37509 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 44 cccgcccgcccgtccgtccgtgtg 67 |||||||| ||||||||||||||| Sbjct: 37493 cccgcccgtccgtccgtccgtgtg 37516
>gb|BC012214.1| Mus musculus Rab geranylgeranyl transferase, a subunit, mRNA (cDNA clone MGC:19255 IMAGE:3967218), complete cds Length = 2176 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 44 cccgcccgcccgtccgtccgt 64 ||||||||||||||||||||| Sbjct: 43 cccgcccgcccgtccgtccgt 23
>gb|AY258323.1| Rubella virus strain BRD-II, complete genome Length = 9778 Score = 42.1 bits (21), Expect = 0.90 Identities = 24/25 (96%) Strand = Plus / Plus Query: 31 ccgccgcctgccccccgcccgcccg 55 ||||||||||||||| ||||||||| Sbjct: 2303 ccgccgcctgcccccagcccgcccg 2327
>ref|NM_019519.1| Mus musculus Rab geranylgeranyl transferase, a subunit (Rabggta), mRNA Length = 2547 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 44 cccgcccgcccgtccgtccgt 64 ||||||||||||||||||||| Sbjct: 38 cccgcccgcccgtccgtccgt 18
>emb|AL390091.1|NCB12F1 Neurospora crassa DNA linkage group II BAC clone B12F1 Length = 68478 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 44 cccgcccgcccgtccgtccgt 64 ||||||||||||||||||||| Sbjct: 42914 cccgcccgcccgtccgtccgt 42894 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 44 cccgcccgcccgtccgtccgtgtg 67 |||||||| ||||||||||||||| Sbjct: 42910 cccgcccgtccgtccgtccgtgtg 42887
>emb|BX470185.18| Zebrafish DNA sequence from clone CH211-222D3 in linkage group 3, complete sequence Length = 198900 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Plus Query: 44 cccgcccgcccgtccgtccgt 64 ||||||||||||||||||||| Sbjct: 27596 cccgcccgcccgtccgtccgt 27616
>dbj|AK146917.1| Mus musculus 17 days embryo kidney cDNA, RIKEN full-length enriched library, clone:I920074L06 product:Rab geranylgeranyl transferase, a subunit, full insert sequence Length = 2422 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 44 cccgcccgcccgtccgtccgt 64 ||||||||||||||||||||| Sbjct: 61 cccgcccgcccgtccgtccgt 41
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Plus Query: 44 cccgcccgcccgtccgtccgt 64 ||||||||||||||||||||| Sbjct: 8317334 cccgcccgcccgtccgtccgt 8317354
>gb|AC135495.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1664B11, complete sequence Length = 126040 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Plus Query: 44 cccgcccgcccgtccgtccgt 64 ||||||||||||||||||||| Sbjct: 56755 cccgcccgcccgtccgtccgt 56775
>ref|NM_214226.1| Sus scrofa inositol(1,3,4,5)tetrakisphosphate receptor (CENTA1), mRNA Length = 1544 Score = 42.1 bits (21), Expect = 0.90 Identities = 24/25 (96%) Strand = Plus / Minus Query: 39 tgccccccgcccgcccgtccgtccg 63 |||| |||||||||||||||||||| Sbjct: 80 tgccgcccgcccgcccgtccgtccg 56
>gb|AF127662.1|AF127662 Mus musculus strain C57BL/6J-gm/gm RAB geranylgeranyl transferase alpha subunit (Rabggta) mRNA, complete cds, alternatively spliced Length = 2466 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 44 cccgcccgcccgtccgtccgt 64 ||||||||||||||||||||| Sbjct: 38 cccgcccgcccgtccgtccgt 18
>gb|AF127661.1|AF127661 Mus musculus strain C57BL/6J-gm/gm RAB geranylgeranyl transferase alpha subunit (Rabggta) pseudogene, complete sequence Length = 2435 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 44 cccgcccgcccgtccgtccgt 64 ||||||||||||||||||||| Sbjct: 38 cccgcccgcccgtccgtccgt 18
>gb|AF127660.1|AF127660 Mus musculus strain C57BL/6J RAB geranylgeranyl transferase alpha subunit (Rabggta) mRNA, complete cds, alternatively spliced Length = 2492 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 44 cccgcccgcccgtccgtccgt 64 ||||||||||||||||||||| Sbjct: 38 cccgcccgcccgtccgtccgt 18
>gb|AF127659.1|AF127659 Mus musculus strain C57BL/6J-gm/gm RAB geranylgeranyl transferase alpha subunit (Rabggta) mRNA, complete cds, alternatively spliced Length = 2547 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 44 cccgcccgcccgtccgtccgt 64 ||||||||||||||||||||| Sbjct: 38 cccgcccgcccgtccgtccgt 18
>gb|AF127658.1|AF127658 Mus musculus strain C57BL/6J RAB geranylgeranyl transferase alpha subunit (Rabggta) mRNA, complete cds, alternatively spliced Length = 2547 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 44 cccgcccgcccgtccgtccgt 64 ||||||||||||||||||||| Sbjct: 38 cccgcccgcccgtccgtccgt 18
>gb|AF127657.1|AF127657 Mus musculus strain C57BL/6J-gm/gm RAB geranylgeranyl transferase alpha subunit (Rabggta) pseudogene, complete sequence Length = 2338 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 44 cccgcccgcccgtccgtccgt 64 ||||||||||||||||||||| Sbjct: 38 cccgcccgcccgtccgtccgt 18
>gb|AF127656.1|AF127656 Mus musculus strain C57BL/6J RAB geranylgeranyl transferase alpha subunit (Rabggta) mRNA, complete cds, alternatively spliced Length = 2395 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 44 cccgcccgcccgtccgtccgt 64 ||||||||||||||||||||| Sbjct: 38 cccgcccgcccgtccgtccgt 18
>gb|AF127655.1|AF127655 Mus musculus strain C57BL/6J-gm/gm RAB geranylgeranyl transferase alpha subunit (Rabggta) gene, complete cds, alternatively spliced Length = 2685 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 44 cccgcccgcccgtccgtccgt 64 ||||||||||||||||||||| Sbjct: 38 cccgcccgcccgtccgtccgt 18
>gb|AF127654.1|AF127654 Mus musculus strain C57BL/6J RAB geranylgeranyl transferase alpha subunit (Rabggta) gene, complete cds, alternatively spliced Length = 2685 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 44 cccgcccgcccgtccgtccgt 64 ||||||||||||||||||||| Sbjct: 38 cccgcccgcccgtccgtccgt 18
>emb|AL845372.6| Zebrafish DNA sequence from clone DKEYP-113C1 in linkage group 20, complete sequence Length = 80017 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 44 cccgcccgcccgtccgtccgt 64 ||||||||||||||||||||| Sbjct: 44988 cccgcccgcccgtccgtccgt 44968
>emb|CR381567.9| Zebrafish DNA sequence from clone DKEY-115O4 in linkage group 23, complete sequence Length = 142417 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 44 cccgcccgcccgtccgtccgt 64 ||||||||||||||||||||| Sbjct: 45151 cccgcccgcccgtccgtccgt 45131
>gb|AC159324.2| Mus musculus BAC clone RP23-9D1 from chromosome 12, complete sequence Length = 207280 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 44 cccgcccgcccgtccgtccgt 64 ||||||||||||||||||||| Sbjct: 13780 cccgcccgcccgtccgtccgt 13760
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 42.1 bits (21), Expect = 0.90 Identities = 24/25 (96%) Strand = Plus / Plus Query: 29 caccgccgcctgccccccgcccgcc 53 ||||||||| ||||||||||||||| Sbjct: 2074480 caccgccgcatgccccccgcccgcc 2074504
>emb|CR974568.14| Mouse DNA sequence from clone RP23-39N20 on chromosome 12, complete sequence Length = 251037 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Plus Query: 44 cccgcccgcccgtccgtccgt 64 ||||||||||||||||||||| Sbjct: 108721 cccgcccgcccgtccgtccgt 108741
>emb|CR388420.19| Zebrafish DNA sequence from clone DKEY-37H18 in linkage group 13, complete sequence Length = 121689 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Plus Query: 44 cccgcccgcccgtccgtccgt 64 ||||||||||||||||||||| Sbjct: 73131 cccgcccgcccgtccgtccgt 73151
>gb|U88368.1|SSU88368 Sus scrofa inositol(1,3,4,5)tetrakisphosphate receptor mRNA, complete cds Length = 1544 Score = 42.1 bits (21), Expect = 0.90 Identities = 24/25 (96%) Strand = Plus / Minus Query: 39 tgccccccgcccgcccgtccgtccg 63 |||| |||||||||||||||||||| Sbjct: 80 tgccgcccgcccgcccgtccgtccg 56
>gb|L07320.1|HS5E1A Murine cytomegalovirus e1 protein gene, complete cds Length = 4536 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 44 cccgcccgcccgtccgtccgt 64 ||||||||||||||||||||| Sbjct: 765 cccgcccgcccgtccgtccgt 745
>gb|AC164878.2| Mus musculus BAC clone RP23-364G24 from chromosome 13, complete sequence Length = 181893 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 ccgcccgcccgtccgtccgt 64 |||||||||||||||||||| Sbjct: 94642 ccgcccgcccgtccgtccgt 94623
>gb|AC162034.6| Mus musculus chromosome 7, clone RP23-285B12, complete sequence Length = 197907 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 36 gcctgccccccgcccgcccg 55 |||||||||||||||||||| Sbjct: 122700 gcctgccccccgcccgcccg 122681
>gb|DQ215783.1| Taeniopygia guttata clone 0058P0012B09 proteasome alpha 1 subunit variant 1-like mRNA, complete sequence Length = 1190 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 32 cgccgcctgccccccgcccgcccg 55 |||||||||||| ||||||||||| Sbjct: 15 cgccgcctgcccgccgcccgcccg 38
>gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, complete sequence Length = 124050 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 ccgcccgcccgtccgtccgt 64 |||||||||||||||||||| Sbjct: 72202 ccgcccgcccgtccgtccgt 72221
>emb|CR847515.10| Zebrafish DNA sequence from clone DKEYP-60A7 in linkage group 9, complete sequence Length = 153947 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 tttgctttgaatgaatgaat 130 |||||||||||||||||||| Sbjct: 143337 tttgctttgaatgaatgaat 143356
>gb|AC012596.4| Homo sapiens BAC clone CTD-2523K17 from 7, complete sequence Length = 154859 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 tttgaatgaatgaatccatc 135 |||||||||||||||||||| Sbjct: 68017 tttgaatgaatgaatccatc 68036
>gb|AY225468.1| Mus musculus interleukin 11 gene, promoter region and partial 5'UTR Length = 3811 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 gcctgccccccgcccgcccg 55 |||||||||||||||||||| Sbjct: 3600 gcctgccccccgcccgcccg 3619
>emb|AL161740.16| Human DNA sequence from clone RP6-239D12 on chromosome 1p32.1-33 Contains 3' end of the DAB1 gene for disabled homolog 1 (Drosophila), a novel gene and the 5' end of a novel gene, complete sequence Length = 60856 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 tttgaatgaatgaatccatc 135 |||||||||||||||||||| Sbjct: 53904 tttgaatgaatgaatccatc 53885
>gb|AF486513.1| Hordeum vulgare cultivar Yon M Kei GBSSI gene, promoter and 5' untranslated region Length = 1201 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 ccgcccgcccgtccgtccgt 64 |||||||||||||||||||| Sbjct: 864 ccgcccgcccgtccgtccgt 883
>gb|AF486512.1| Hordeum vulgare cultivar CDC Alamo GBSSI gene, promoter and 5' untranslated region Length = 1197 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 ccgcccgcccgtccgtccgt 64 |||||||||||||||||||| Sbjct: 865 ccgcccgcccgtccgtccgt 884
>gb|AF486508.1| Hordeum vulgare cultivar Oderbrucker GBSSI gene, promoter and 5' untranslated region Length = 1195 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 ccgcccgcccgtccgtccgt 64 |||||||||||||||||||| Sbjct: 863 ccgcccgcccgtccgtccgt 882
>emb|BX897736.7| Zebrafish DNA sequence from clone CH211-181B15 in linkage group 17, complete sequence Length = 141987 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 tgaatgaatgaatccatccc 137 |||||||||||||||||||| Sbjct: 10020 tgaatgaatgaatccatccc 10001
>gb|AC023310.4| Homo sapiens chromosome 15, clone RP11-336L20, complete sequence Length = 177355 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 117 ttgaatgaatgaatccatcccatt 140 ||||||||||||||| |||||||| Sbjct: 47384 ttgaatgaatgaatcaatcccatt 47407
>tpg|BK001890.1| TPA: TPA_inf: Drosophila melanogaster HDC08154 (HDC08154) gene, complete cds Length = 1399 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 ccgcccgcccgtccgtccgt 64 |||||||||||||||||||| Sbjct: 1362 ccgcccgcccgtccgtccgt 1381
>dbj|AB118808.1| Hordeum vulgare subsp. spontaneum GBSSI gene for granule bound starch synthase I, complete cds, strain:OUH643 Length = 5119 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 ccgcccgcccgtccgtccgt 64 |||||||||||||||||||| Sbjct: 778 ccgcccgcccgtccgtccgt 797
>dbj|AB089162.1| Hordeum vulgare subsp. vulgare GBSSI gene for granule bound starch synthase I Length = 5190 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 ccgcccgcccgtccgtccgt 64 |||||||||||||||||||| Sbjct: 803 ccgcccgcccgtccgtccgt 822
>dbj|AB088761.1| Hordeum vulgare subsp. vulgare GBSSI gene for granule bound starch synthase I, complete cds Length = 5190 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 ccgcccgcccgtccgtccgt 64 |||||||||||||||||||| Sbjct: 803 ccgcccgcccgtccgtccgt 822
>gb|AC100757.2| Homo sapiens chromosome 15, clone RP11-566K19, complete sequence Length = 171987 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 117 ttgaatgaatgaatccatcccatt 140 ||||||||||||||| |||||||| Sbjct: 31381 ttgaatgaatgaatcaatcccatt 31404
>gb|AC107487.1| Drosophila melanogaster 3L BAC RP98-10D20 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 170900 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 ccgcccgcccgtccgtccgt 64 |||||||||||||||||||| Sbjct: 32006 ccgcccgcccgtccgtccgt 32025
>emb|BX548249.13| Zebrafish DNA sequence from clone CH211-93A2 in linkage group 21, complete sequence Length = 153142 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 ccgcccgcccgtccgtccgt 64 |||||||||||||||||||| Sbjct: 66704 ccgcccgcccgtccgtccgt 66723
>emb|BX119977.10| Zebrafish DNA sequence from clone CH211-198A3 in linkage group 7, complete sequence Length = 182186 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 ccgcccgcccgtccgtccgt 64 |||||||||||||||||||| Sbjct: 16590 ccgcccgcccgtccgtccgt 16609
>gb|AF022186.2|AF022186 Cyanidium caldarium strain RK1 chloroplast, complete genome Length = 164921 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 gagtaatttcaagttcagtt 257 |||||||||||||||||||| Sbjct: 98148 gagtaatttcaagttcagtt 98129
>gb|AC136687.6| Homo sapiens chromosome 15, clone RP11-439M15, complete sequence Length = 180708 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 117 ttgaatgaatgaatccatcccatt 140 ||||||||||||||| |||||||| Sbjct: 146620 ttgaatgaatgaatcaatcccatt 146597
>gb|AC134393.6| Homo sapiens chromosome 15, clone CTC-803A3, complete sequence Length = 132353 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 117 ttgaatgaatgaatccatcccatt 140 ||||||||||||||| |||||||| Sbjct: 74975 ttgaatgaatgaatcaatcccatt 74998
>gb|AC131280.9| Homo sapiens chromosome 15, clone RP11-467L19, complete sequence Length = 194754 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 117 ttgaatgaatgaatccatcccatt 140 ||||||||||||||| |||||||| Sbjct: 116211 ttgaatgaatgaatcaatcccatt 116188
>dbj|AB154356.1| Hordeum vulgare subsp. spontaneum GBSSI gene for granule bound starch synthase I, complete cds Length = 4535 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 ccgcccgcccgtccgtccgt 64 |||||||||||||||||||| Sbjct: 381 ccgcccgcccgtccgtccgt 400
>dbj|AB118809.1| Hordeum vulgare subsp. spontaneum GBSSI gene for granule bound starch synthase I, complete cds, strain:OUH602 Length = 5190 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 ccgcccgcccgtccgtccgt 64 |||||||||||||||||||| Sbjct: 803 ccgcccgcccgtccgtccgt 822
>emb|X07932.1|HVWAXYR Barley mRNA pcwx27 for waxy locus Length = 2311 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 ccgcccgcccgtccgtccgt 64 |||||||||||||||||||| Sbjct: 114 ccgcccgcccgtccgtccgt 133
>emb|X07931.1|HVWAXYG Barley DNA for waxy locus encoding starch synthase (EC 2.4.1.11) Length = 5153 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 ccgcccgcccgtccgtccgt 64 |||||||||||||||||||| Sbjct: 919 ccgcccgcccgtccgtccgt 938
>emb|AL929340.4| Zebrafish DNA sequence from clone CH211-248N16 in linkage group 20, complete sequence Length = 163231 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 ccgcccgcccgtccgtccgt 64 |||||||||||||||||||| Sbjct: 60266 ccgcccgcccgtccgtccgt 60247
>gb|AE003476.3| Drosophila melanogaster chromosome 3L, section 10 of 83 of the complete sequence Length = 304419 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 ccgcccgcccgtccgtccgt 64 |||||||||||||||||||| Sbjct: 80625 ccgcccgcccgtccgtccgt 80644
>gb|AC116680.21| Mus musculus chromosome 12, clone RP23-476M16, complete sequence Length = 215303 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 atttcaagttcagttgagtt 262 |||||||||||||||||||| Sbjct: 198065 atttcaagttcagttgagtt 198046
>gb|U68299.1|MCU68299 Mouse cytomegalovirus 1 complete genomic sequence Length = 230278 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 ccgcccgcccgtccgtccgt 64 |||||||||||||||||||| Sbjct: 162006 ccgcccgcccgtccgtccgt 161987
>emb|CR388150.14| Zebrafish DNA sequence from clone DKEY-115A2 in linkage group 3, complete sequence Length = 170964 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 ccgcccgcccgtccgtccgt 64 |||||||||||||||||||| Sbjct: 119791 ccgcccgcccgtccgtccgt 119772
>dbj|AB054056.1| Hordeum vulgare waxy gene, partial sequence, cultivar:Shonupana Length = 802 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 ccgcccgcccgtccgtccgt 64 |||||||||||||||||||| Sbjct: 365 ccgcccgcccgtccgtccgt 384
>dbj|AB054055.2| Hordeum vulgare waxy gene, partial sequence, cultivar:Senbon hadaka Length = 1011 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 ccgcccgcccgtccgtccgt 64 |||||||||||||||||||| Sbjct: 380 ccgcccgcccgtccgtccgt 399
>emb|AL772162.4| Mouse DNA sequence from clone RP23-175J8 on chromosome 2, complete sequence Length = 100090 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 111 tttgctttgaatgaatgaat 130 |||||||||||||||||||| Sbjct: 53784 tttgctttgaatgaatgaat 53765 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,290,018 Number of Sequences: 3902068 Number of extensions: 2290018 Number of successful extensions: 56204 Number of sequences better than 10.0: 81 Number of HSP's better than 10.0 without gapping: 81 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 56020 Number of HSP's gapped (non-prelim): 183 length of query: 274 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 252 effective length of database: 17,147,199,772 effective search space: 4321094342544 effective search space used: 4321094342544 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)