ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd24d18
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CYSP4_DICDI (P54639) Cysteine proteinase 4 precursor (EC 3.4.22.-) 33 0.38
2TIR3_YEAST (P40552) Cell wall protein TIR3 precursor 32 0.85
3ENO_VIBCH (Q9KPC5) Enolase (EC 4.2.1.11) (2-phosphoglycerate deh... 32 1.4
4FBXW7_DROME (Q9VZF4) F-box/WD-repeat protein 7 (F-box and WD-40 ... 31 2.5
5CRH2_YEAST (P32623) Probable glycosidase CRH2 precursor (EC 3.2.... 31 2.5
6VE2_HPV25 (P36787) Regulatory protein E2 30 5.5
7CYA1_DROME (P32870) Ca(2+)/calmodulin-responsive adenylate cycla... 30 5.5
8LCMT1_CRYNE (Q5KLL9) Leucine carboxyl methyltransferase 1 (EC 2.... 30 5.5
9PKN1_CHLCV (Q822R1) Serine/threonine-protein kinase pkn1 (EC 2.7... 30 5.5
10MID2_YEAST (P36027) Mating process protein MID2 (Serine-rich pro... 29 7.2
11ATG18_ASHGO (Q75F47) Autophagy-related protein 18 29 7.2
12CENG1_MOUSE (Q3UHD9) Centaurin-gamma 1 (ARF-GAP with GTP-binding... 29 7.2
13VIT1_CHICK (P87498) Vitellogenin-1 precursor (Vitellogenin I) (M... 29 7.2
14K1C16_MOUSE (Q9Z2K1) Keratin, type I cytoskeletal 16 (Cytokerati... 29 7.2
15Y608_ENCCU (Q8SVF4) Hypothetical protein ECU06_0080 29 9.3
16DHH1_YEAST (P39517) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-)... 29 9.3
17CENG1_RAT (Q8CGU4) Centaurin-gamma 1 (ARF-GAP with GTP-binding p... 29 9.3
18UXUA_BURS3 (Q396Y9) Mannonate dehydratase (EC 4.2.1.8) (D-mannon... 29 9.3
19VE2_HPV5B (P26545) Regulatory protein E2 29 9.3
20FNDC3_HUMAN (Q9Y2H6) Fibronectin type-III domain-containing prot... 29 9.3

>CYSP4_DICDI (P54639) Cysteine proteinase 4 precursor (EC 3.4.22.-)|
          Length = 442

 Score = 33.5 bits (75), Expect = 0.38
 Identities = 24/82 (29%), Positives = 40/82 (48%)
 Frame = -2

Query: 321 KSSSRASFCGDDDSTVERSSTLLRATSKASSTCTEGAARTGARLSSGIS*YPSCAASEYG 142
           KSSS +S  G   S+         ++ KASS+ + G   + A  +SG S   S + S+ G
Sbjct: 298 KSSSSSSTGGKTSSSSSSGKASSSSSGKASSSSSSGKTSSAASSTSG-SQSGSQSGSQSG 356

Query: 141 SAAGTERGGVNIGARLSSSRPG 76
            + G++ G  +   + S+S  G
Sbjct: 357 QSTGSQSGQTSASGQASASGSG 378



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>TIR3_YEAST (P40552) Cell wall protein TIR3 precursor|
          Length = 269

 Score = 32.3 bits (72), Expect = 0.85
 Identities = 26/79 (32%), Positives = 40/79 (50%)
 Frame = -2

Query: 321 KSSSRASFCGDDDSTVERSSTLLRATSKASSTCTEGAARTGARLSSGIS*YPSCAASEYG 142
           +SSS AS    + S+   SS+   ++S ASS+ +E A  + +  SSG     S A+S   
Sbjct: 155 ESSSAASSSASESSSAA-SSSASESSSAASSSASEAAKSSSSAKSSG----SSAASSAAS 209

Query: 141 SAAGTERGGVNIGARLSSS 85
           SA+       +  A+ SSS
Sbjct: 210 SASSKASSAASSSAKASSS 228



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>ENO_VIBCH (Q9KPC5) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)|
           (2-phospho-D-glycerate hydro-lyase)
          Length = 433

 Score = 31.6 bits (70), Expect = 1.4
 Identities = 30/106 (28%), Positives = 43/106 (40%)
 Frame = -2

Query: 327 VVKSSSRASFCGDDDSTVERSSTLLRATSKASSTCTEGAARTGARLSSGIS*YPSCAASE 148
           V+KS    +  GD+          L++ ++A     E  A  G +L + I+    CAASE
Sbjct: 196 VLKSKGYNTAVGDEGGFAPN----LKSNAEALEVIAEAVAAAGYKLGTDITLAMDCAASE 251

Query: 147 YGSAAGTERGGVNIGARLSSSRPGKRFLLHAGELQPAXRTEDGFLE 10
           +  A   E      G R+ +S     FL    E  P    EDG  E
Sbjct: 252 FYDAEKKEYNLKGEG-RIFTSNGFSDFLEELTEKFPIVSIEDGLDE 296



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>FBXW7_DROME (Q9VZF4) F-box/WD-repeat protein 7 (F-box and WD-40 domain protein|
           7) (Protein archipelago)
          Length = 1326

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 4/88 (4%)
 Frame = -2

Query: 303 SFCGDDDSTVERSSTLLRATSKASSTCTEGAARTGARLSSGIS*YPSCAASEYGSAAG-- 130
           S  G    +  RS +   + S  SST   GAART    ++  + YPS A +  GS+    
Sbjct: 460 SSLGASSCSQHRSGSSSTSKSMESSTSCTGAARTDVYTNTNSNDYPSLAPTTSGSSTSGG 519

Query: 129 --TERGGVNIGARLSSSRPGKRFLLHAG 52
              +    N+ A +S S  G +    +G
Sbjct: 520 SCQQDQEENVSASVSYSSVGSQTSQESG 547



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>CRH2_YEAST (P32623) Probable glycosidase CRH2 precursor (EC 3.2.-.-) (Congo|
           red hypersensitive protein 2) (Unknown transcript 2
           protein)
          Length = 467

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
 Frame = -2

Query: 321 KSSSRASFCGDDDSTVERSSTLLRATSKASSTCTEGAARTGARLSSGIS*YPSCAASEYG 142
           K SS+ S      ST   SS+   ++S +SST T+   +  + +SS ++      +S  G
Sbjct: 379 KKSSKTS------STASSSSSSSSSSSSSSSTATKNGDKVVSSVSSSVTSQTQTTSSVSG 432

Query: 141 SAAG--TERGGVNIGARLSSS 85
           SA+   +   G N GA ++++
Sbjct: 433 SASSSTSSMSGNNAGANVAAN 453



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>VE2_HPV25 (P36787) Regulatory protein E2|
          Length = 502

 Score = 29.6 bits (65), Expect = 5.5
 Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 9/107 (8%)
 Frame = -2

Query: 336 TRVVVKSSSRASFCGDDDSTVERSSTLLRATSKAS---------STCTEGAARTGARLSS 184
           +R  ++S SR+    +  S+  RS +  R  + A+         +T ++ AAR+ +  SS
Sbjct: 279 SRSRIRSRSRSRSRSESQSSKRRSRSRSRRKTSATRGRGPGSPTTTTSDRAARSPSTTSS 338

Query: 183 GIS*YPSCAASEYGSAAGTERGGVNIGARLSSSRPGKRFLLHAGELQ 43
             S     + S  GS+ G    G     RLS S   KR    +G ++
Sbjct: 339 ATSQRSQRSRSRAGSSRGGRGRGGRRRHRLSESPTSKRSRRESGSVR 385



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>CYA1_DROME (P32870) Ca(2+)/calmodulin-responsive adenylate cyclase (EC 4.6.1.1)|
            (ATP pyrophosphate-lyase) (Protein rutabaga)
          Length = 2248

 Score = 29.6 bits (65), Expect = 5.5
 Identities = 25/104 (24%), Positives = 38/104 (36%), Gaps = 16/104 (15%)
 Frame = -3

Query: 401  PRYHLQSRRFSGSCVDTVGIAGPGW*SSHPPEPLFVEMMIAPWKEVQRY-----YEPPQ- 240
            P +HL S                G+      EPL     +AP  ++        YEPP+ 
Sbjct: 1431 PPHHLHSNLNLNQSQHPPSFTSLGYGQCRESEPLLHASSVAPVAKIMPMQHAPKYEPPRY 1490

Query: 239  -KPHRLV---------QKGQHEQEQDFHLEFLDTHPVLHQNTVQ 138
              PH ++         Q+ QH+Q Q    +   THP    + +Q
Sbjct: 1491 TSPHTMLSQQHQQQQQQQHQHQQPQSQSAQDQQTHPAQDPHPLQ 1534



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>LCMT1_CRYNE (Q5KLL9) Leucine carboxyl methyltransferase 1 (EC 2.1.1.-) (Protein|
           phosphatase methyltransferase 1)
          Length = 398

 Score = 29.6 bits (65), Expect = 5.5
 Identities = 22/49 (44%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = +2

Query: 53  PA*SRNRFPGRDDESLAPIFTPPRSVPAA-EPYSDAAQDGYQEIPDESL 196
           PA  R R P R    L P   PP S+P A    S AAQ GY + P  SL
Sbjct: 39  PALGRCRPPHRRRRRLRPPVRPPVSLPVALTTRSSAAQLGYLQDPFASL 87



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>PKN1_CHLCV (Q822R1) Serine/threonine-protein kinase pkn1 (EC 2.7.11.1)|
          Length = 618

 Score = 29.6 bits (65), Expect = 5.5
 Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
 Frame = -3

Query: 311 PEPLFVEMMIAPWKEVQRYYEPPQKPHRLVQKGQHEQEQDF-HLEFLDTHPVLHQNTVQL 135
           P+PLF EM+     +  R         R  Q+ +H   + F H  FLD HPV ++  V+ 
Sbjct: 377 PQPLFTEMVFIEGGKFLR-------GSREGQRDEHPVHEIFLHSFFLDIHPVTNEQFVRY 429

Query: 134 PVLNGEE 114
              +G E
Sbjct: 430 LECSGSE 436



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>MID2_YEAST (P36027) Mating process protein MID2 (Serine-rich protein SMS1)|
           (Protein kinase A interference protein)
          Length = 376

 Score = 29.3 bits (64), Expect = 7.2
 Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
 Frame = -2

Query: 318 SSSRASFCGDDDSTVERSSTLLRATSKASSTCTEGAARTGARLSS--GIS*YPSCAASEY 145
           +SS +S   D  S+   S +   ATS++S++ T+ +  + + LSS    S  PS   S  
Sbjct: 106 TSSSSSASSDSSSSSSFSISSTSATSESSTSSTQTSTSSSSSLSSTPSSSSSPSTITSAP 165

Query: 144 GSAAGTERGGVNIGARLSSSRPGKRFL 64
            +++       N G+ ++S   GK  L
Sbjct: 166 STSSTPSTTAYNQGSTITSIINGKTIL 192



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>ATG18_ASHGO (Q75F47) Autophagy-related protein 18|
          Length = 537

 Score = 29.3 bits (64), Expect = 7.2
 Identities = 24/101 (23%), Positives = 44/101 (43%)
 Frame = -2

Query: 315 SSRASFCGDDDSTVERSSTLLRATSKASSTCTEGAARTGARLSSGIS*YPSCAASEYGSA 136
           S+R+S        +++ +  L  +SKA +      A T   +S G   + + +     S+
Sbjct: 174 SARSSIAEGGSEYLDKGTEPLTDSSKAGADLNSVKASTETTISPGKE-HSAGSGLNATSS 232

Query: 135 AGTERGGVNIGARLSSSRPGKRFLLHAGELQPAXRTEDGFL 13
           +GT + G  I   L + +P      H GE+     ++DG L
Sbjct: 233 SGTVKNGDVIFFNLQTLQPTMVIEAHKGEIAALALSKDGTL 273



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>CENG1_MOUSE (Q3UHD9) Centaurin-gamma 1 (ARF-GAP with GTP-binding protein-like,|
           ankyrin repeat and pleckstrin homology domains 2)
           (AGAP-2) (Phosphatidylinositol-3-kinase enhancer) (PIKE)
          Length = 1186

 Score = 29.3 bits (64), Expect = 7.2
 Identities = 26/73 (35%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
 Frame = -2

Query: 249 ATSKASSTCTEGAARTGARLSSGIS*YPSCAASEYGSAAGTERGGVNIGARLS---SSRP 79
           A S+ S   +EG  R     S+  +   + AA   GSAA T  GGV  GA      S R 
Sbjct: 206 AGSRLSWPESEGKPRVKGSKSTAGTGASAAAAGGGGSAAVTTSGGVGAGAGTRGKLSPRK 265

Query: 78  GKRFLLHAGELQP 40
           GK   L   +L P
Sbjct: 266 GKSKTLDNSDLHP 278



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>VIT1_CHICK (P87498) Vitellogenin-1 precursor (Vitellogenin I) (Minor|
            vitellogenin) [Contains: Lipovitellin-1 (Lipovitellin I)
            (LVI); Phosvitin (PV); Lipovitellin-2 (Lipovitellin II)
            (LVII); YGP42]
          Length = 1912

 Score = 29.3 bits (64), Expect = 7.2
 Identities = 20/83 (24%), Positives = 41/83 (49%)
 Frame = -2

Query: 318  SSSRASFCGDDDSTVERSSTLLRATSKASSTCTEGAARTGARLSSGIS*YPSCAASEYGS 139
            SSS +S    D S+  RSS+   ++S +SS+ +  ++++ +   S  S   S +++   S
Sbjct: 1158 SSSSSSSSSSDSSSSSRSSSSSDSSSSSSSSSSSSSSKSKSSSRSSKSNRSSSSSNSKDS 1217

Query: 138  AAGTERGGVNIGARLSSSRPGKR 70
            ++ + +      +  SS   G R
Sbjct: 1218 SSSSSKSNSKGSSSSSSKASGTR 1240



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>K1C16_MOUSE (Q9Z2K1) Keratin, type I cytoskeletal 16 (Cytokeratin-16) (CK-16)|
           (Keratin-16) (K16)
          Length = 468

 Score = 29.3 bits (64), Expect = 7.2
 Identities = 19/52 (36%), Positives = 25/52 (48%)
 Frame = -2

Query: 336 TRVVVKSSSRASFCGDDDSTVERSSTLLRATSKASSTCTEGAARTGARLSSG 181
           +R    SSS    CG    +   SS L   + +A STC  G + T +R SSG
Sbjct: 4   SRQFTSSSSMKGSCGIGGGSSRMSSILAGGSCRAPSTC-GGMSVTSSRFSSG 54



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>Y608_ENCCU (Q8SVF4) Hypothetical protein ECU06_0080|
          Length = 580

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
 Frame = -3

Query: 272 KEVQRYYEPPQKPHRLVQKGQHEQEQDFHLEFLDTHPVLHQNTVQLPVLNGEE---*ILA 102
           + V R+ + P+K    + +G+ E+ +   LE++    VLH     L +L  E+     + 
Sbjct: 391 RRVLRWRKSPEKIKEELDRGREERWRGKSLEYIKEQKVLHDIAGVLELLRSEDADKFFMD 450

Query: 101 QGSHHRGQGS 72
            G H +G  S
Sbjct: 451 TGEHSKGGSS 460



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>DHH1_YEAST (P39517) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-) (DExD/H-box|
           helicase 1)
          Length = 506

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = -3

Query: 314 PPEPLFVEMMIAPWKEVQRYYEPPQKPHRLVQKGQHEQEQDF 189
           PP+    + M+ P  + Q+ Y PPQ P    Q+G   Q++ F
Sbjct: 456 PPQQHHPQFMVPPSHQQQQAYPPPQMPS---QQGYPPQQEHF 494



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>CENG1_RAT (Q8CGU4) Centaurin-gamma 1 (ARF-GAP with GTP-binding protein-like,|
           ankyrin repeat and pleckstrin homology domains 2)
           (AGAP-2) (Phosphatidylinositol-3-kinase enhancer) (PIKE)
          Length = 1186

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 26/73 (35%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
 Frame = -2

Query: 249 ATSKASSTCTEGAARTGARLSSGIS*YPSCAASEYGSAAGTERGGVNIGARLS---SSRP 79
           A S+ S   +EG  R     S+  +   + AA   GSAA T  GGV  GA      S R 
Sbjct: 206 AGSRLSWPESEGKPRVKGSKSTAGTGASAVAAGGGGSAAVTTSGGVGAGAGARGKLSPRK 265

Query: 78  GKRFLLHAGELQP 40
           GK   L   +L P
Sbjct: 266 GKSKTLDNSDLHP 278



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>UXUA_BURS3 (Q396Y9) Mannonate dehydratase (EC 4.2.1.8) (D-mannonate hydrolase)|
          Length = 352

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
 Frame = -3

Query: 374 FSGSCVDTV----GIAGPGW*SSHPPEPLFVEMMIAPWKEV 264
           FS   VD +    GIA PGW SS+ PE L  + ++A +++V
Sbjct: 127 FSTDAVDRIDPDDGIALPGWDSSYQPEQL--KALLAEYRDV 165



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>VE2_HPV5B (P26545) Regulatory protein E2|
          Length = 514

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 24/83 (28%), Positives = 33/83 (39%), Gaps = 3/83 (3%)
 Frame = -2

Query: 312 SRASFCGDDDSTVERSSTLLRATSKASSTCTEGAARTGARLSSGIS*YPSCAASEYGSA- 136
           SR++  G   +   RS    R+  ++ STC  G  R+  R S   S Y SC       A 
Sbjct: 295 SRSTSVGKTRALTSRS----RSRGRSPSTCRRGGGRSPRRRSRSPSTYSSCTTQRSQRAR 350

Query: 135 --AGTERGGVNIGARLSSSRPGK 73
             + T RG          SR G+
Sbjct: 351 AESPTTRGARGSRGSRGGSRGGR 373



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>FNDC3_HUMAN (Q9Y2H6) Fibronectin type-III domain-containing protein 3a|
          Length = 1134

 Score = 28.9 bits (63), Expect = 9.3
 Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
 Frame = +2

Query: 107  IFTPPRSVPAA--EPYSDAAQDGYQEIPDESLAPVRAAPSV 223
            IFT P+SVPAA   P  +   D   EI  E L P++  P +
Sbjct: 975  IFTTPKSVPAALKAPKIEKVNDHICEITWECLQPMKGDPVI 1015


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,067,086
Number of Sequences: 219361
Number of extensions: 1446985
Number of successful extensions: 5209
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 4981
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5200
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4142954952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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