| Clone Name | basd24d18 |
|---|---|
| Clone Library Name | barley_pub |
>CYSP4_DICDI (P54639) Cysteine proteinase 4 precursor (EC 3.4.22.-)| Length = 442 Score = 33.5 bits (75), Expect = 0.38 Identities = 24/82 (29%), Positives = 40/82 (48%) Frame = -2 Query: 321 KSSSRASFCGDDDSTVERSSTLLRATSKASSTCTEGAARTGARLSSGIS*YPSCAASEYG 142 KSSS +S G S+ ++ KASS+ + G + A +SG S S + S+ G Sbjct: 298 KSSSSSSTGGKTSSSSSSGKASSSSSGKASSSSSSGKTSSAASSTSG-SQSGSQSGSQSG 356 Query: 141 SAAGTERGGVNIGARLSSSRPG 76 + G++ G + + S+S G Sbjct: 357 QSTGSQSGQTSASGQASASGSG 378
>TIR3_YEAST (P40552) Cell wall protein TIR3 precursor| Length = 269 Score = 32.3 bits (72), Expect = 0.85 Identities = 26/79 (32%), Positives = 40/79 (50%) Frame = -2 Query: 321 KSSSRASFCGDDDSTVERSSTLLRATSKASSTCTEGAARTGARLSSGIS*YPSCAASEYG 142 +SSS AS + S+ SS+ ++S ASS+ +E A + + SSG S A+S Sbjct: 155 ESSSAASSSASESSSAA-SSSASESSSAASSSASEAAKSSSSAKSSG----SSAASSAAS 209 Query: 141 SAAGTERGGVNIGARLSSS 85 SA+ + A+ SSS Sbjct: 210 SASSKASSAASSSAKASSS 228
>ENO_VIBCH (Q9KPC5) Enolase (EC 4.2.1.11) (2-phosphoglycerate dehydratase)| (2-phospho-D-glycerate hydro-lyase) Length = 433 Score = 31.6 bits (70), Expect = 1.4 Identities = 30/106 (28%), Positives = 43/106 (40%) Frame = -2 Query: 327 VVKSSSRASFCGDDDSTVERSSTLLRATSKASSTCTEGAARTGARLSSGIS*YPSCAASE 148 V+KS + GD+ L++ ++A E A G +L + I+ CAASE Sbjct: 196 VLKSKGYNTAVGDEGGFAPN----LKSNAEALEVIAEAVAAAGYKLGTDITLAMDCAASE 251 Query: 147 YGSAAGTERGGVNIGARLSSSRPGKRFLLHAGELQPAXRTEDGFLE 10 + A E G R+ +S FL E P EDG E Sbjct: 252 FYDAEKKEYNLKGEG-RIFTSNGFSDFLEELTEKFPIVSIEDGLDE 296
>FBXW7_DROME (Q9VZF4) F-box/WD-repeat protein 7 (F-box and WD-40 domain protein| 7) (Protein archipelago) Length = 1326 Score = 30.8 bits (68), Expect = 2.5 Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 4/88 (4%) Frame = -2 Query: 303 SFCGDDDSTVERSSTLLRATSKASSTCTEGAARTGARLSSGIS*YPSCAASEYGSAAG-- 130 S G + RS + + S SST GAART ++ + YPS A + GS+ Sbjct: 460 SSLGASSCSQHRSGSSSTSKSMESSTSCTGAARTDVYTNTNSNDYPSLAPTTSGSSTSGG 519 Query: 129 --TERGGVNIGARLSSSRPGKRFLLHAG 52 + N+ A +S S G + +G Sbjct: 520 SCQQDQEENVSASVSYSSVGSQTSQESG 547
>CRH2_YEAST (P32623) Probable glycosidase CRH2 precursor (EC 3.2.-.-) (Congo| red hypersensitive protein 2) (Unknown transcript 2 protein) Length = 467 Score = 30.8 bits (68), Expect = 2.5 Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 2/81 (2%) Frame = -2 Query: 321 KSSSRASFCGDDDSTVERSSTLLRATSKASSTCTEGAARTGARLSSGIS*YPSCAASEYG 142 K SS+ S ST SS+ ++S +SST T+ + + +SS ++ +S G Sbjct: 379 KKSSKTS------STASSSSSSSSSSSSSSSTATKNGDKVVSSVSSSVTSQTQTTSSVSG 432 Query: 141 SAAG--TERGGVNIGARLSSS 85 SA+ + G N GA ++++ Sbjct: 433 SASSSTSSMSGNNAGANVAAN 453
>VE2_HPV25 (P36787) Regulatory protein E2| Length = 502 Score = 29.6 bits (65), Expect = 5.5 Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 9/107 (8%) Frame = -2 Query: 336 TRVVVKSSSRASFCGDDDSTVERSSTLLRATSKAS---------STCTEGAARTGARLSS 184 +R ++S SR+ + S+ RS + R + A+ +T ++ AAR+ + SS Sbjct: 279 SRSRIRSRSRSRSRSESQSSKRRSRSRSRRKTSATRGRGPGSPTTTTSDRAARSPSTTSS 338 Query: 183 GIS*YPSCAASEYGSAAGTERGGVNIGARLSSSRPGKRFLLHAGELQ 43 S + S GS+ G G RLS S KR +G ++ Sbjct: 339 ATSQRSQRSRSRAGSSRGGRGRGGRRRHRLSESPTSKRSRRESGSVR 385
>CYA1_DROME (P32870) Ca(2+)/calmodulin-responsive adenylate cyclase (EC 4.6.1.1)| (ATP pyrophosphate-lyase) (Protein rutabaga) Length = 2248 Score = 29.6 bits (65), Expect = 5.5 Identities = 25/104 (24%), Positives = 38/104 (36%), Gaps = 16/104 (15%) Frame = -3 Query: 401 PRYHLQSRRFSGSCVDTVGIAGPGW*SSHPPEPLFVEMMIAPWKEVQRY-----YEPPQ- 240 P +HL S G+ EPL +AP ++ YEPP+ Sbjct: 1431 PPHHLHSNLNLNQSQHPPSFTSLGYGQCRESEPLLHASSVAPVAKIMPMQHAPKYEPPRY 1490 Query: 239 -KPHRLV---------QKGQHEQEQDFHLEFLDTHPVLHQNTVQ 138 PH ++ Q+ QH+Q Q + THP + +Q Sbjct: 1491 TSPHTMLSQQHQQQQQQQHQHQQPQSQSAQDQQTHPAQDPHPLQ 1534
>LCMT1_CRYNE (Q5KLL9) Leucine carboxyl methyltransferase 1 (EC 2.1.1.-) (Protein| phosphatase methyltransferase 1) Length = 398 Score = 29.6 bits (65), Expect = 5.5 Identities = 22/49 (44%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Frame = +2 Query: 53 PA*SRNRFPGRDDESLAPIFTPPRSVPAA-EPYSDAAQDGYQEIPDESL 196 PA R R P R L P PP S+P A S AAQ GY + P SL Sbjct: 39 PALGRCRPPHRRRRRLRPPVRPPVSLPVALTTRSSAAQLGYLQDPFASL 87
>PKN1_CHLCV (Q822R1) Serine/threonine-protein kinase pkn1 (EC 2.7.11.1)| Length = 618 Score = 29.6 bits (65), Expect = 5.5 Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 1/67 (1%) Frame = -3 Query: 311 PEPLFVEMMIAPWKEVQRYYEPPQKPHRLVQKGQHEQEQDF-HLEFLDTHPVLHQNTVQL 135 P+PLF EM+ + R R Q+ +H + F H FLD HPV ++ V+ Sbjct: 377 PQPLFTEMVFIEGGKFLR-------GSREGQRDEHPVHEIFLHSFFLDIHPVTNEQFVRY 429 Query: 134 PVLNGEE 114 +G E Sbjct: 430 LECSGSE 436
>MID2_YEAST (P36027) Mating process protein MID2 (Serine-rich protein SMS1)| (Protein kinase A interference protein) Length = 376 Score = 29.3 bits (64), Expect = 7.2 Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 2/87 (2%) Frame = -2 Query: 318 SSSRASFCGDDDSTVERSSTLLRATSKASSTCTEGAARTGARLSS--GIS*YPSCAASEY 145 +SS +S D S+ S + ATS++S++ T+ + + + LSS S PS S Sbjct: 106 TSSSSSASSDSSSSSSFSISSTSATSESSTSSTQTSTSSSSSLSSTPSSSSSPSTITSAP 165 Query: 144 GSAAGTERGGVNIGARLSSSRPGKRFL 64 +++ N G+ ++S GK L Sbjct: 166 STSSTPSTTAYNQGSTITSIINGKTIL 192
>ATG18_ASHGO (Q75F47) Autophagy-related protein 18| Length = 537 Score = 29.3 bits (64), Expect = 7.2 Identities = 24/101 (23%), Positives = 44/101 (43%) Frame = -2 Query: 315 SSRASFCGDDDSTVERSSTLLRATSKASSTCTEGAARTGARLSSGIS*YPSCAASEYGSA 136 S+R+S +++ + L +SKA + A T +S G + + + S+ Sbjct: 174 SARSSIAEGGSEYLDKGTEPLTDSSKAGADLNSVKASTETTISPGKE-HSAGSGLNATSS 232 Query: 135 AGTERGGVNIGARLSSSRPGKRFLLHAGELQPAXRTEDGFL 13 +GT + G I L + +P H GE+ ++DG L Sbjct: 233 SGTVKNGDVIFFNLQTLQPTMVIEAHKGEIAALALSKDGTL 273
>CENG1_MOUSE (Q3UHD9) Centaurin-gamma 1 (ARF-GAP with GTP-binding protein-like,| ankyrin repeat and pleckstrin homology domains 2) (AGAP-2) (Phosphatidylinositol-3-kinase enhancer) (PIKE) Length = 1186 Score = 29.3 bits (64), Expect = 7.2 Identities = 26/73 (35%), Positives = 32/73 (43%), Gaps = 3/73 (4%) Frame = -2 Query: 249 ATSKASSTCTEGAARTGARLSSGIS*YPSCAASEYGSAAGTERGGVNIGARLS---SSRP 79 A S+ S +EG R S+ + + AA GSAA T GGV GA S R Sbjct: 206 AGSRLSWPESEGKPRVKGSKSTAGTGASAAAAGGGGSAAVTTSGGVGAGAGTRGKLSPRK 265 Query: 78 GKRFLLHAGELQP 40 GK L +L P Sbjct: 266 GKSKTLDNSDLHP 278
>VIT1_CHICK (P87498) Vitellogenin-1 precursor (Vitellogenin I) (Minor| vitellogenin) [Contains: Lipovitellin-1 (Lipovitellin I) (LVI); Phosvitin (PV); Lipovitellin-2 (Lipovitellin II) (LVII); YGP42] Length = 1912 Score = 29.3 bits (64), Expect = 7.2 Identities = 20/83 (24%), Positives = 41/83 (49%) Frame = -2 Query: 318 SSSRASFCGDDDSTVERSSTLLRATSKASSTCTEGAARTGARLSSGIS*YPSCAASEYGS 139 SSS +S D S+ RSS+ ++S +SS+ + ++++ + S S S +++ S Sbjct: 1158 SSSSSSSSSSDSSSSSRSSSSSDSSSSSSSSSSSSSSKSKSSSRSSKSNRSSSSSNSKDS 1217 Query: 138 AAGTERGGVNIGARLSSSRPGKR 70 ++ + + + SS G R Sbjct: 1218 SSSSSKSNSKGSSSSSSKASGTR 1240
>K1C16_MOUSE (Q9Z2K1) Keratin, type I cytoskeletal 16 (Cytokeratin-16) (CK-16)| (Keratin-16) (K16) Length = 468 Score = 29.3 bits (64), Expect = 7.2 Identities = 19/52 (36%), Positives = 25/52 (48%) Frame = -2 Query: 336 TRVVVKSSSRASFCGDDDSTVERSSTLLRATSKASSTCTEGAARTGARLSSG 181 +R SSS CG + SS L + +A STC G + T +R SSG Sbjct: 4 SRQFTSSSSMKGSCGIGGGSSRMSSILAGGSCRAPSTC-GGMSVTSSRFSSG 54
>Y608_ENCCU (Q8SVF4) Hypothetical protein ECU06_0080| Length = 580 Score = 28.9 bits (63), Expect = 9.3 Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 3/70 (4%) Frame = -3 Query: 272 KEVQRYYEPPQKPHRLVQKGQHEQEQDFHLEFLDTHPVLHQNTVQLPVLNGEE---*ILA 102 + V R+ + P+K + +G+ E+ + LE++ VLH L +L E+ + Sbjct: 391 RRVLRWRKSPEKIKEELDRGREERWRGKSLEYIKEQKVLHDIAGVLELLRSEDADKFFMD 450 Query: 101 QGSHHRGQGS 72 G H +G S Sbjct: 451 TGEHSKGGSS 460
>DHH1_YEAST (P39517) ATP-dependent RNA helicase DHH1 (EC 3.6.1.-) (DExD/H-box| helicase 1) Length = 506 Score = 28.9 bits (63), Expect = 9.3 Identities = 14/42 (33%), Positives = 22/42 (52%) Frame = -3 Query: 314 PPEPLFVEMMIAPWKEVQRYYEPPQKPHRLVQKGQHEQEQDF 189 PP+ + M+ P + Q+ Y PPQ P Q+G Q++ F Sbjct: 456 PPQQHHPQFMVPPSHQQQQAYPPPQMPS---QQGYPPQQEHF 494
>CENG1_RAT (Q8CGU4) Centaurin-gamma 1 (ARF-GAP with GTP-binding protein-like,| ankyrin repeat and pleckstrin homology domains 2) (AGAP-2) (Phosphatidylinositol-3-kinase enhancer) (PIKE) Length = 1186 Score = 28.9 bits (63), Expect = 9.3 Identities = 26/73 (35%), Positives = 32/73 (43%), Gaps = 3/73 (4%) Frame = -2 Query: 249 ATSKASSTCTEGAARTGARLSSGIS*YPSCAASEYGSAAGTERGGVNIGARLS---SSRP 79 A S+ S +EG R S+ + + AA GSAA T GGV GA S R Sbjct: 206 AGSRLSWPESEGKPRVKGSKSTAGTGASAVAAGGGGSAAVTTSGGVGAGAGARGKLSPRK 265 Query: 78 GKRFLLHAGELQP 40 GK L +L P Sbjct: 266 GKSKTLDNSDLHP 278
>UXUA_BURS3 (Q396Y9) Mannonate dehydratase (EC 4.2.1.8) (D-mannonate hydrolase)| Length = 352 Score = 28.9 bits (63), Expect = 9.3 Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 4/41 (9%) Frame = -3 Query: 374 FSGSCVDTV----GIAGPGW*SSHPPEPLFVEMMIAPWKEV 264 FS VD + GIA PGW SS+ PE L + ++A +++V Sbjct: 127 FSTDAVDRIDPDDGIALPGWDSSYQPEQL--KALLAEYRDV 165
>VE2_HPV5B (P26545) Regulatory protein E2| Length = 514 Score = 28.9 bits (63), Expect = 9.3 Identities = 24/83 (28%), Positives = 33/83 (39%), Gaps = 3/83 (3%) Frame = -2 Query: 312 SRASFCGDDDSTVERSSTLLRATSKASSTCTEGAARTGARLSSGIS*YPSCAASEYGSA- 136 SR++ G + RS R+ ++ STC G R+ R S S Y SC A Sbjct: 295 SRSTSVGKTRALTSRS----RSRGRSPSTCRRGGGRSPRRRSRSPSTYSSCTTQRSQRAR 350 Query: 135 --AGTERGGVNIGARLSSSRPGK 73 + T RG SR G+ Sbjct: 351 AESPTTRGARGSRGSRGGSRGGR 373
>FNDC3_HUMAN (Q9Y2H6) Fibronectin type-III domain-containing protein 3a| Length = 1134 Score = 28.9 bits (63), Expect = 9.3 Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 2/41 (4%) Frame = +2 Query: 107 IFTPPRSVPAA--EPYSDAAQDGYQEIPDESLAPVRAAPSV 223 IFT P+SVPAA P + D EI E L P++ P + Sbjct: 975 IFTTPKSVPAALKAPKIEKVNDHICEITWECLQPMKGDPVI 1015 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 73,067,086 Number of Sequences: 219361 Number of extensions: 1446985 Number of successful extensions: 5209 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 4981 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5200 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4142954952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)