| Clone Name | basd24d18 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_197898.1| Oryza sativa (japonica cultivar-group) hepatocyte growth factor-regulated tyrosine kinase substrate-like protein (OSJNBa0035H01.5), mRNA Length = 1554 Score = 448 bits (226), Expect = e-123 Identities = 403/462 (87%) Strand = Plus / Plus Query: 70 tcgcttccctggccgcgatgatgagagccttgcgccaatatttactcctccccgttcagt 129 |||||| ||||| || ||||||||||| || || ||||||||||||||||||||||||| Sbjct: 623 tcgctttcctgggcgtgatgatgagagtctggcaccaatatttactcctccccgttcagc 682 Query: 130 accggcagctgaaccgtattctgatgcagcacaggatgggtatcaagaaattccagatga 189 ||| |||||||||| ||||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 683 accttcagctgaaccatattctgctgcagcacaggaagggtatcaagaaattccagatga 742 Query: 190 aagtcttgctcctgttcgtgctgccccttctgtacaagtcgatgaggcttttgaggtggc 249 |||| |||| || || | | || ||| |||| |||||| |||| |||||||||||||| Sbjct: 743 aagttttgcgccagtccacgttgttcctgctgtgcaagtcaatgaagcttttgaggtggc 802 Query: 250 tcgtaatagcgttgaacttctttccacggtgctatcatcatctccacaaaaagaggctct 309 ||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| Sbjct: 803 tcgtaatagcgttgaacttctttccacggtgctttcttcttctccacaaaaagaggctct 862 Query: 310 ggaggatgacttgactaccaccctggtccagcaatgccaacagtgtcaacacacgatcca 369 |||||||| |||||||||||||||| |||||||||||||||||||| | ||| ||||| Sbjct: 863 caaggatgacctgactaccaccctggttcagcaatgccaacagtgtcagcgcaccatcca 922 Query: 370 gagaatcgtcgagactgcaggtgataacgaggctcaactcttcgaggcactgagcatcca 429 ||||||| | ||||| || ||||| ||||||||||| ||||| |||||| |||| |||| Sbjct: 923 gagaatcattgagacggctggtgacaacgaggctcagctctttgaggcattgagtgtcca 982 Query: 430 cgatgaacttcagaaagttctgtccaagtacgaagacctcaaggagcccattgtcgcaga 489 |||||||||| |||| ||||| |||||||| |||| |||||||| || |||| ||||| Sbjct: 983 cgatgaacttgagaaggttctctccaagtataaagaactcaaggaacctgttgttgcaga 1042 Query: 490 gcctgagccagaaccagcgatgattccagtcacggtggagcc 531 ||||||| |||| ||||| |||||||||||||| |||||||| Sbjct: 1043 gcctgaggcagagccagccatgattccagtcaccgtggagcc 1084
>emb|AJ495791.1|OSA495791 Oryza sativa (japonica cultivar-group) mRNA for TOM2 protein Length = 1606 Score = 448 bits (226), Expect = e-123 Identities = 403/462 (87%) Strand = Plus / Plus Query: 70 tcgcttccctggccgcgatgatgagagccttgcgccaatatttactcctccccgttcagt 129 |||||| ||||| || ||||||||||| || || ||||||||||||||||||||||||| Sbjct: 639 tcgctttcctgggcgtgatgatgagagtctggcaccaatatttactcctccccgttcagc 698 Query: 130 accggcagctgaaccgtattctgatgcagcacaggatgggtatcaagaaattccagatga 189 ||| |||||||||| ||||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 699 accttcagctgaaccatattctgctgcagcacaggaagggtatcaagaaattccagatga 758 Query: 190 aagtcttgctcctgttcgtgctgccccttctgtacaagtcgatgaggcttttgaggtggc 249 |||| |||| || || | | || ||| |||| |||||| |||| |||||||||||||| Sbjct: 759 aagttttgcgccagtccacgttgttcctgctgtgcaagtcaatgaagcttttgaggtggc 818 Query: 250 tcgtaatagcgttgaacttctttccacggtgctatcatcatctccacaaaaagaggctct 309 ||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| Sbjct: 819 tcgtaatagcgttgaacttctttccacggtgctttcttcttctccacaaaaagaggctct 878 Query: 310 ggaggatgacttgactaccaccctggtccagcaatgccaacagtgtcaacacacgatcca 369 |||||||| |||||||||||||||| |||||||||||||||||||| | ||| ||||| Sbjct: 879 caaggatgacctgactaccaccctggttcagcaatgccaacagtgtcagcgcaccatcca 938 Query: 370 gagaatcgtcgagactgcaggtgataacgaggctcaactcttcgaggcactgagcatcca 429 ||||||| | ||||| || ||||| ||||||||||| ||||| |||||| |||| |||| Sbjct: 939 gagaatcattgagacggctggtgacaacgaggctcagctctttgaggcattgagtgtcca 998 Query: 430 cgatgaacttcagaaagttctgtccaagtacgaagacctcaaggagcccattgtcgcaga 489 |||||||||| |||| ||||| |||||||| |||| |||||||| || |||| ||||| Sbjct: 999 cgatgaacttgagaaggttctctccaagtataaagaactcaaggaacctgttgttgcaga 1058 Query: 490 gcctgagccagaaccagcgatgattccagtcacggtggagcc 531 ||||||| |||| ||||| |||||||||||||| |||||||| Sbjct: 1059 gcctgaggcagagccagccatgattccagtcaccgtggagcc 1100
>gb|AC027037.6| Oryza sativa chromosome 10 BAC OSJNBa0035H01 genomic sequence, complete sequence Length = 64582 Score = 254 bits (128), Expect = 3e-64 Identities = 212/240 (88%) Strand = Plus / Plus Query: 70 tcgcttccctggccgcgatgatgagagccttgcgccaatatttactcctccccgttcagt 129 |||||| ||||| || ||||||||||| || || ||||||||||||||||||||||||| Sbjct: 49163 tcgctttcctgggcgtgatgatgagagtctggcaccaatatttactcctccccgttcagc 49222 Query: 130 accggcagctgaaccgtattctgatgcagcacaggatgggtatcaagaaattccagatga 189 ||| |||||||||| ||||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 49223 accttcagctgaaccatattctgctgcagcacaggaagggtatcaagaaattccagatga 49282 Query: 190 aagtcttgctcctgttcgtgctgccccttctgtacaagtcgatgaggcttttgaggtggc 249 |||| |||| || || | | || ||| |||| |||||| |||| |||||||||||||| Sbjct: 49283 aagttttgcgccagtccacgttgttcctgctgtgcaagtcaatgaagcttttgaggtggc 49342 Query: 250 tcgtaatagcgttgaacttctttccacggtgctatcatcatctccacaaaaagaggctct 309 ||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| Sbjct: 49343 tcgtaatagcgttgaacttctttccacggtgctttcttcttctccacaaaaagaggctct 49402 Score = 206 bits (104), Expect = 5e-50 Identities = 191/220 (86%) Strand = Plus / Plus Query: 312 aggatgacttgactaccaccctggtccagcaatgccaacagtgtcaacacacgatccaga 371 |||||||| |||||||||||||||| |||||||||||||||||||| | ||| ||||||| Sbjct: 49642 aggatgacctgactaccaccctggttcagcaatgccaacagtgtcagcgcaccatccaga 49701 Query: 372 gaatcgtcgagactgcaggtgataacgaggctcaactcttcgaggcactgagcatccacg 431 ||||| | ||||| || ||||| ||||||||||| ||||| |||||| |||| |||||| Sbjct: 49702 gaatcattgagacggctggtgacaacgaggctcagctctttgaggcattgagtgtccacg 49761 Query: 432 atgaacttcagaaagttctgtccaagtacgaagacctcaaggagcccattgtcgcagagc 491 |||||||| |||| ||||| |||||||| |||| |||||||| || |||| ||||||| Sbjct: 49762 atgaacttgagaaggttctctccaagtataaagaactcaaggaacctgttgttgcagagc 49821 Query: 492 ctgagccagaaccagcgatgattccagtcacggtggagcc 531 ||||| |||| ||||| |||||||||||||| |||||||| Sbjct: 49822 ctgaggcagagccagccatgattccagtcaccgtggagcc 49861
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 254 bits (128), Expect = 3e-64 Identities = 212/240 (88%) Strand = Plus / Plus Query: 70 tcgcttccctggccgcgatgatgagagccttgcgccaatatttactcctccccgttcagt 129 |||||| ||||| || ||||||||||| || || ||||||||||||||||||||||||| Sbjct: 22533445 tcgctttcctgggcgtgatgatgagagtctggcaccaatatttactcctccccgttcagc 22533504 Query: 130 accggcagctgaaccgtattctgatgcagcacaggatgggtatcaagaaattccagatga 189 ||| |||||||||| ||||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 22533505 accttcagctgaaccatattctgctgcagcacaggaagggtatcaagaaattccagatga 22533564 Query: 190 aagtcttgctcctgttcgtgctgccccttctgtacaagtcgatgaggcttttgaggtggc 249 |||| |||| || || | | || ||| |||| |||||| |||| |||||||||||||| Sbjct: 22533565 aagttttgcgccagtccacgttgttcctgctgtgcaagtcaatgaagcttttgaggtggc 22533624 Query: 250 tcgtaatagcgttgaacttctttccacggtgctatcatcatctccacaaaaagaggctct 309 ||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| Sbjct: 22533625 tcgtaatagcgttgaacttctttccacggtgctttcttcttctccacaaaaagaggctct 22533684 Score = 206 bits (104), Expect = 5e-50 Identities = 191/220 (86%) Strand = Plus / Plus Query: 312 aggatgacttgactaccaccctggtccagcaatgccaacagtgtcaacacacgatccaga 371 |||||||| |||||||||||||||| |||||||||||||||||||| | ||| ||||||| Sbjct: 22533924 aggatgacctgactaccaccctggttcagcaatgccaacagtgtcagcgcaccatccaga 22533983 Query: 372 gaatcgtcgagactgcaggtgataacgaggctcaactcttcgaggcactgagcatccacg 431 ||||| | ||||| || ||||| ||||||||||| ||||| |||||| |||| |||||| Sbjct: 22533984 gaatcattgagacggctggtgacaacgaggctcagctctttgaggcattgagtgtccacg 22534043 Query: 432 atgaacttcagaaagttctgtccaagtacgaagacctcaaggagcccattgtcgcagagc 491 |||||||| |||| ||||| |||||||| |||| |||||||| || |||| ||||||| Sbjct: 22534044 atgaacttgagaaggttctctccaagtataaagaactcaaggaacctgttgttgcagagc 22534103 Query: 492 ctgagccagaaccagcgatgattccagtcacggtggagcc 531 ||||| |||| ||||| |||||||||||||| |||||||| Sbjct: 22534104 ctgaggcagagccagccatgattccagtcaccgtggagcc 22534143 Score = 141 bits (71), Expect = 3e-30 Identities = 73/74 (98%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 19935437 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 19935496 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 19935497 aagcaggaatcgct 19935510 Score = 141 bits (71), Expect = 3e-30 Identities = 73/74 (98%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 10280000 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 10279941 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 10279940 aagcaggaatcgct 10279927 Score = 73.8 bits (37), Expect = 5e-10 Identities = 39/40 (97%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgca 40 |||||||||||||||||||||||||||||||||| ||||| Sbjct: 10384316 gtgagctaactccaaaaacccgtcctcagttcggattgca 10384355 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 tgcatgaagcaggaatcgct 74 |||||||||||||||||||| Sbjct: 10384352 tgcatgaagcaggaatcgct 10384371
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 254 bits (128), Expect = 3e-64 Identities = 212/240 (88%) Strand = Plus / Plus Query: 70 tcgcttccctggccgcgatgatgagagccttgcgccaatatttactcctccccgttcagt 129 |||||| ||||| || ||||||||||| || || ||||||||||||||||||||||||| Sbjct: 22545913 tcgctttcctgggcgtgatgatgagagtctggcaccaatatttactcctccccgttcagc 22545972 Query: 130 accggcagctgaaccgtattctgatgcagcacaggatgggtatcaagaaattccagatga 189 ||| |||||||||| ||||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 22545973 accttcagctgaaccatattctgctgcagcacaggaagggtatcaagaaattccagatga 22546032 Query: 190 aagtcttgctcctgttcgtgctgccccttctgtacaagtcgatgaggcttttgaggtggc 249 |||| |||| || || | | || ||| |||| |||||| |||| |||||||||||||| Sbjct: 22546033 aagttttgcgccagtccacgttgttcctgctgtgcaagtcaatgaagcttttgaggtggc 22546092 Query: 250 tcgtaatagcgttgaacttctttccacggtgctatcatcatctccacaaaaagaggctct 309 ||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| Sbjct: 22546093 tcgtaatagcgttgaacttctttccacggtgctttcttcttctccacaaaaagaggctct 22546152 Score = 206 bits (104), Expect = 5e-50 Identities = 191/220 (86%) Strand = Plus / Plus Query: 312 aggatgacttgactaccaccctggtccagcaatgccaacagtgtcaacacacgatccaga 371 |||||||| |||||||||||||||| |||||||||||||||||||| | ||| ||||||| Sbjct: 22546392 aggatgacctgactaccaccctggttcagcaatgccaacagtgtcagcgcaccatccaga 22546451 Query: 372 gaatcgtcgagactgcaggtgataacgaggctcaactcttcgaggcactgagcatccacg 431 ||||| | ||||| || ||||| ||||||||||| ||||| |||||| |||| |||||| Sbjct: 22546452 gaatcattgagacggctggtgacaacgaggctcagctctttgaggcattgagtgtccacg 22546511 Query: 432 atgaacttcagaaagttctgtccaagtacgaagacctcaaggagcccattgtcgcagagc 491 |||||||| |||| ||||| |||||||| |||| |||||||| || |||| ||||||| Sbjct: 22546512 atgaacttgagaaggttctctccaagtataaagaactcaaggaacctgttgttgcagagc 22546571 Query: 492 ctgagccagaaccagcgatgattccagtcacggtggagcc 531 ||||| |||| ||||| |||||||||||||| |||||||| Sbjct: 22546572 ctgaggcagagccagccatgattccagtcaccgtggagcc 22546611 Score = 141 bits (71), Expect = 3e-30 Identities = 73/74 (98%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 19946713 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 19946772 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 19946773 aagcaggaatcgct 19946786 Score = 141 bits (71), Expect = 3e-30 Identities = 73/74 (98%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 10286039 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 10285980 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 10285979 aagcaggaatcgct 10285966 Score = 73.8 bits (37), Expect = 5e-10 Identities = 39/40 (97%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgca 40 |||||||||||||||||||||||||||||||||| ||||| Sbjct: 10390355 gtgagctaactccaaaaacccgtcctcagttcggattgca 10390394 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 55 tgcatgaagcaggaatcgct 74 |||||||||||||||||||| Sbjct: 10390391 tgcatgaagcaggaatcgct 10390410
>gb|AY506529.1| Zea mays strain NB mitochondrion, complete genome Length = 569630 Score = 141 bits (71), Expect = 3e-30 Identities = 73/74 (98%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 328302 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 328243 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 328242 aagcaggaatcgct 328229
>gb|AC078977.6| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0496H07, complete sequence Length = 164477 Score = 141 bits (71), Expect = 3e-30 Identities = 73/74 (98%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 88345 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 88286 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 88285 aagcaggaatcgct 88272
>gb|DQ490950.1| Festuca arundinacea 16S ribosomal RNA gene, partial sequence; chloroplast Length = 812 Score = 141 bits (71), Expect = 3e-30 Identities = 73/74 (98%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 273 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 214 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 213 aagcaggaatcgct 200
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 141 bits (71), Expect = 3e-30 Identities = 73/74 (98%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 122631 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 122572 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 122571 aagcaggaatcgct 122558 Score = 141 bits (71), Expect = 3e-30 Identities = 73/74 (98%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 92525 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 92584 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 92585 aagcaggaatcgct 92598
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 141 bits (71), Expect = 3e-30 Identities = 73/74 (98%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 122631 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 122572 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 122571 aagcaggaatcgct 122558 Score = 141 bits (71), Expect = 3e-30 Identities = 73/74 (98%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 92525 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 92584 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 92585 aagcaggaatcgct 92598
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 141 bits (71), Expect = 3e-30 Identities = 73/74 (98%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 122580 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 122521 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 122520 aagcaggaatcgct 122507 Score = 141 bits (71), Expect = 3e-30 Identities = 73/74 (98%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 92470 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 92529 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 92530 aagcaggaatcgct 92543
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 141 bits (71), Expect = 3e-30 Identities = 73/74 (98%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 126167 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 126108 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 126107 aagcaggaatcgct 126094
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 141 bits (71), Expect = 3e-30 Identities = 73/74 (98%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 126358 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 126299 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 126298 aagcaggaatcgct 126285 Score = 141 bits (71), Expect = 3e-30 Identities = 73/74 (98%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 96379 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 96438 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 96439 aagcaggaatcgct 96452
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 141 bits (71), Expect = 3e-30 Identities = 73/74 (98%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 122601 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 122542 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 122541 aagcaggaatcgct 122528 Score = 141 bits (71), Expect = 3e-30 Identities = 73/74 (98%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 92517 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 92576 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 92577 aagcaggaatcgct 92590
>gb|DQ129641.1| Uncultured bacterium clone AKIW1139 16S ribosomal RNA gene, partial sequence Length = 1444 Score = 141 bits (71), Expect = 3e-30 Identities = 73/74 (98%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1207 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 1266 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 1267 aagcaggaatcgct 1280
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 141 bits (71), Expect = 3e-30 Identities = 73/74 (98%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 119570 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 119629 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 119630 aagcaggaatcgct 119643 Score = 141 bits (71), Expect = 3e-30 Identities = 73/74 (98%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 87695 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 87754 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 87755 aagcaggaatcgct 87768 Score = 141 bits (71), Expect = 3e-30 Identities = 73/74 (98%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 11292 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 11351 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 11352 aagcaggaatcgct 11365
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 141 bits (71), Expect = 3e-30 Identities = 73/74 (98%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 138100 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 138159 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 138160 aagcaggaatcgct 138173
>gb|DQ417650.1| Festuca ovina 16S ribosomal RNA gene, partial sequence; plastid Length = 1409 Score = 141 bits (71), Expect = 3e-30 Identities = 73/74 (98%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1183 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 1242 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 1243 aagcaggaatcgct 1256
>gb|DQ417649.1| Agrostis capillaris 16S ribosomal RNA gene, partial sequence; plastid Length = 1406 Score = 141 bits (71), Expect = 3e-30 Identities = 73/74 (98%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1180 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 1239 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 1240 aagcaggaatcgct 1253
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 141 bits (71), Expect = 3e-30 Identities = 73/74 (98%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 47588 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 47529 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 47528 aagcaggaatcgct 47515 Score = 141 bits (71), Expect = 3e-30 Identities = 73/74 (98%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 17530 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 17589 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 17590 aagcaggaatcgct 17603
>dbj|AB240470.1| Uncultured bacterium gene for 16S rRNA, partial sequence, clone: SRRT24 Length = 1478 Score = 141 bits (71), Expect = 3e-30 Identities = 73/74 (98%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1236 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 1295 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 1296 aagcaggaatcgct 1309
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 141 bits (71), Expect = 3e-30 Identities = 73/74 (98%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 61325 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 61266 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 61265 aagcaggaatcgct 61252
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 141 bits (71), Expect = 3e-30 Identities = 73/74 (98%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 9265450 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 9265509 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 9265510 aagcaggaatcgct 9265523 Score = 141 bits (71), Expect = 3e-30 Identities = 73/74 (98%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 9206622 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 9206681 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 9206682 aagcaggaatcgct 9206695 Score = 141 bits (71), Expect = 3e-30 Identities = 73/74 (98%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 9161544 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 9161603 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 9161604 aagcaggaatcgct 9161617 Score = 141 bits (71), Expect = 3e-30 Identities = 73/74 (98%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 9129669 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 9129728 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 9129729 aagcaggaatcgct 9129742 Score = 141 bits (71), Expect = 3e-30 Identities = 73/74 (98%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 9053366 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 9053425 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 9053426 aagcaggaatcgct 9053439 Score = 133 bits (67), Expect = 6e-28 Identities = 72/74 (97%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 9224950 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 9225009 Query: 61 aagcaggaatcgct 74 ||||| |||||||| Sbjct: 9225010 aagcaagaatcgct 9225023 Score = 67.9 bits (34), Expect = 3e-08 Identities = 34/34 (100%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcgg 34 |||||||||||||||||||||||||||||||||| Sbjct: 23619038 gtgagctaactccaaaaacccgtcctcagttcgg 23619005
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 141 bits (71), Expect = 3e-30 Identities = 73/74 (98%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 9244545 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 9244486 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 9244485 aagcaggaatcgct 9244472
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 141 bits (71), Expect = 3e-30 Identities = 73/74 (98%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 14179247 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 14179188 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 14179187 aagcaggaatcgct 14179174 Score = 85.7 bits (43), Expect = 1e-13 Identities = 66/74 (89%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||| |||||||| |||||| ||| ||| |||||||| |||||| Sbjct: 22884333 gtgagctaactccaaaaatccgtcctcggttcggattgtaggttgcaactcatttgcatg 22884392 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 22884393 aagcaggaatcgct 22884406
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 141 bits (71), Expect = 3e-30 Identities = 73/74 (98%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 12828708 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 12828649 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 12828648 aagcaggaatcgct 12828635 Score = 141 bits (71), Expect = 3e-30 Identities = 73/74 (98%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 883921 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 883862 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 883861 aagcaggaatcgct 883848
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 141 bits (71), Expect = 3e-30 Identities = 73/74 (98%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 14346710 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 14346769 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 14346770 aagcaggaatcgct 14346783 Score = 141 bits (71), Expect = 3e-30 Identities = 73/74 (98%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 807851 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 807792 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 807791 aagcaggaatcgct 807778 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 36 ttgcaggctgcaactcgcctgcatgaagcaggaatcgct 74 ||||||||||| |||||||||||||||| |||| ||||| Sbjct: 11194554 ttgcaggctgctactcgcctgcatgaagtaggagtcgct 11194516 Score = 46.1 bits (23), Expect = 0.12 Identities = 50/59 (84%) Strand = Plus / Plus Query: 236 gcttttgaggtggctcgtaatagcgttgaacttctttccacggtgctatcatcatctcc 294 |||||||| ||||||||||| ||| | ||||||||||| || || || ||||| ||||| Sbjct: 28693746 gcttttgatgtggctcgtaacagcatagaacttctttcaactgttctttcatcctctcc 28693804
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 141 bits (71), Expect = 3e-30 Identities = 73/74 (98%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 50606 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 50547 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 50546 aagcaggaatcgct 50533
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 141 bits (71), Expect = 3e-30 Identities = 73/74 (98%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 126427 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 126368 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 126367 aagcaggaatcgct 126354 Score = 141 bits (71), Expect = 3e-30 Identities = 73/74 (98%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 96410 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 96469 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 96470 aagcaggaatcgct 96483
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 141 bits (71), Expect = 3e-30 Identities = 73/74 (98%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 55758 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 55699 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 55698 aagcaggaatcgct 55685
>dbj|AP004121.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1442_E05 Length = 162407 Score = 141 bits (71), Expect = 3e-30 Identities = 73/74 (98%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 17059 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 17000 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 16999 aagcaggaatcgct 16986
>dbj|AP004867.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0036E06 Length = 137926 Score = 141 bits (71), Expect = 3e-30 Identities = 73/74 (98%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 85982 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 85923 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 85922 aagcaggaatcgct 85909
>gb|AF176637.1|AF176637 Plastid transformation vector pMSK49 plastid targeting region Length = 5270 Score = 141 bits (71), Expect = 3e-30 Identities = 73/74 (98%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 114 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 55 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 54 aagcaggaatcgct 41
>dbj|AP006052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0067K15 Length = 160162 Score = 141 bits (71), Expect = 3e-30 Identities = 73/74 (98%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 64128 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 64069 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 64068 aagcaggaatcgct 64055
>dbj|AP005408.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0022A24 Length = 148347 Score = 141 bits (71), Expect = 3e-30 Identities = 73/74 (98%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 68632 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 68691 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 68692 aagcaggaatcgct 68705
>emb|Z00028.1|CHZMRRNA Zea mays chloroplast rRNA-operon Length = 8862 Score = 141 bits (71), Expect = 3e-30 Identities = 73/74 (98%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 2732 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 2791 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 2792 aagcaggaatcgct 2805
>dbj|AK105341.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-G10, full insert sequence Length = 1448 Score = 141 bits (71), Expect = 3e-30 Identities = 73/74 (98%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 794 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 853 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 854 aagcaggaatcgct 867
>dbj|AK060734.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-A10, full insert sequence Length = 1950 Score = 141 bits (71), Expect = 3e-30 Identities = 73/74 (98%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 72 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 131 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 132 aagcaggaatcgct 145
>emb|AJ239003.1|TAE239003 Triticum aestivum (L.) partial chloroplast 16S rRNA gene Length = 1482 Score = 141 bits (71), Expect = 3e-30 Identities = 73/74 (98%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1210 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 1269 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 1270 aagcaggaatcgct 1283
>emb|AJ555400.1|TTU555400 Triticum turgidum subsp. dicoccum partial chloroplast 16S rRNA gene Length = 1483 Score = 141 bits (71), Expect = 3e-30 Identities = 73/74 (98%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1211 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 1270 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 1271 aagcaggaatcgct 1284
>emb|AJ555402.1|ATA555402 Aegilops tauschii partial chloroplast 16S rRNA gene Length = 1483 Score = 141 bits (71), Expect = 3e-30 Identities = 73/74 (98%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1211 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 1270 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 1271 aagcaggaatcgct 1284
>emb|AJ555401.1|ASP555401 Aegilops speltoides partial chloroplast 16S rRNA gene Length = 1483 Score = 141 bits (71), Expect = 3e-30 Identities = 73/74 (98%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1211 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 1270 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 1271 aagcaggaatcgct 1284
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 141 bits (71), Expect = 3e-30 Identities = 73/74 (98%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 127144 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 127085 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 127084 aagcaggaatcgct 127071 Score = 141 bits (71), Expect = 3e-30 Identities = 73/74 (98%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 97087 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 97146 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 97147 aagcaggaatcgct 97160
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 141 bits (71), Expect = 3e-30 Identities = 73/74 (98%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 122574 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 122515 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 122514 aagcaggaatcgct 122501 Score = 141 bits (71), Expect = 3e-30 Identities = 73/74 (98%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 92465 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 92524 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 92525 aagcaggaatcgct 92538
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 141 bits (71), Expect = 3e-30 Identities = 73/74 (98%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 122624 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 122565 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 122564 aagcaggaatcgct 122551 Score = 141 bits (71), Expect = 3e-30 Identities = 73/74 (98%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 92270 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 92329 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 92330 aagcaggaatcgct 92343
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 133 bits (67), Expect = 6e-28 Identities = 72/74 (97%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 142219 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 142160 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 142159 aagccggaatcgct 142146 Score = 133 bits (67), Expect = 6e-28 Identities = 72/74 (97%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 106878 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 106937 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 106938 aagccggaatcgct 106951
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 133 bits (67), Expect = 6e-28 Identities = 72/74 (97%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| Sbjct: 25722715 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgaatg 25722774 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 25722775 aagcaggaatcgct 25722788
>gb|AC137991.3| Oryza sativa chromosome 3 BAC OSJNBa0034D21 genomic sequence, complete sequence Length = 190834 Score = 133 bits (67), Expect = 6e-28 Identities = 72/74 (97%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| Sbjct: 122181 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgaatg 122122 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 122121 aagcaggaatcgct 122108
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 133 bits (67), Expect = 6e-28 Identities = 72/74 (97%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 135462 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 135403 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 135402 aagccggaatcgct 135389 Score = 133 bits (67), Expect = 6e-28 Identities = 72/74 (97%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 101416 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 101475 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 101476 aagccggaatcgct 101489
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 133 bits (67), Expect = 6e-28 Identities = 72/74 (97%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 134192 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 134133 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 134132 aagccggaatcgct 134119 Score = 133 bits (67), Expect = 6e-28 Identities = 72/74 (97%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 100443 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 100502 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 100503 aagccggaatcgct 100516
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 133 bits (67), Expect = 6e-28 Identities = 72/74 (97%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 143048 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 142989 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 142988 aagccggaatcgct 142975 Score = 133 bits (67), Expect = 6e-28 Identities = 72/74 (97%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 107012 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 107071 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 107072 aagccggaatcgct 107085
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 133 bits (67), Expect = 6e-28 Identities = 72/74 (97%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 142153 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 142094 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 142093 aagccggaatcgct 142080 Score = 133 bits (67), Expect = 6e-28 Identities = 72/74 (97%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 107792 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 107851 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 107852 aagccggaatcgct 107865
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 133 bits (67), Expect = 6e-28 Identities = 72/74 (97%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 137661 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 137602 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 137601 aagccggaatcgct 137588 Score = 133 bits (67), Expect = 6e-28 Identities = 72/74 (97%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 102621 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 102680 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 102681 aagccggaatcgct 102694
>gb|DQ000201.1| Trewia nudiflora 16S ribosomal RNA gene, partial sequence; chloroplast Length = 1434 Score = 133 bits (67), Expect = 6e-28 Identities = 72/74 (97%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1192 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 1251 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 1252 aagccggaatcgct 1265
>emb|AJ639615.1| Vitis vinifera plastid partial 16S rRNA gene Length = 1486 Score = 133 bits (67), Expect = 6e-28 Identities = 72/74 (97%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1225 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 1284 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 1285 aagccggaatcgct 1298
>dbj|AB200661.1| uncultured bacterium gene for 16S rRNA, partial sequence, clone: G32 Length = 960 Score = 133 bits (67), Expect = 6e-28 Identities = 72/74 (97%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 740 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 799 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 800 aagccggaatcgct 813
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 133 bits (67), Expect = 6e-28 Identities = 72/74 (97%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 18602790 gtgagctaactccaaaaactcgtcctcagttcggattgcaggctgcaactcgcctgcatg 18602731 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 18602730 aagcaggaatcgct 18602717
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 133 bits (67), Expect = 6e-28 Identities = 72/74 (97%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| Sbjct: 25814024 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgaatg 25814083 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 25814084 aagcaggaatcgct 25814097
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 133 bits (67), Expect = 6e-28 Identities = 72/74 (97%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 135462 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 135403 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 135402 aagccggaatcgct 135389 Score = 133 bits (67), Expect = 6e-28 Identities = 72/74 (97%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 101302 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 101361 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 101362 aagccggaatcgct 101375
>gb|AY855838.1| Maytenus hookeri 16S ribosomal RNA gene, partial sequence; chloroplast Length = 1452 Score = 133 bits (67), Expect = 6e-28 Identities = 72/74 (97%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1210 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 1269 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 1270 aagccggaatcgct 1283
>gb|AF244560.1|AF244560 Nymphaea tuberosa 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1463 Score = 133 bits (67), Expect = 6e-28 Identities = 72/74 (97%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1203 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 1262 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 1263 aagccggaatcgct 1276
>gb|AY212282.1| Dendrobium hybrid cultivar isolate ps122 16S ribosomal RNA, partial sequence; chloroplast gene for chloroplast product Length = 375 Score = 133 bits (67), Expect = 6e-28 Identities = 72/74 (97%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 200 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 259 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 260 aagccggaatcgct 273
>gb|AY171318.1| Uncultured bacterium clone s47 16S ribosomal RNA gene, partial sequence Length = 1039 Score = 133 bits (67), Expect = 6e-28 Identities = 72/74 (97%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 903 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 962 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 963 aagccggaatcgct 976
>gb|AY171306.1| Uncultured bacterium clone s41 16S ribosomal RNA gene, partial sequence Length = 1050 Score = 133 bits (67), Expect = 6e-28 Identities = 72/74 (97%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 914 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 973 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 974 aagccggaatcgct 987
>gb|AF263516.1|AF263516 Vitis vinifera 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 502 Score = 133 bits (67), Expect = 6e-28 Identities = 72/74 (97%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 123 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 64 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 63 aagccggaatcgct 50
>dbj|AP005773.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0085C03 Length = 188905 Score = 133 bits (67), Expect = 6e-28 Identities = 72/74 (97%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 185673 gtgagctaactccaaaaactcgtcctcagttcggattgcaggctgcaactcgcctgcatg 185614 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 185613 aagcaggaatcgct 185600
>dbj|AP005468.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0020P04 Length = 153894 Score = 133 bits (67), Expect = 6e-28 Identities = 72/74 (97%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 54893 gtgagctaactccaaaaactcgtcctcagttcggattgcaggctgcaactcgcctgcatg 54834 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 54833 aagcaggaatcgct 54820
>dbj|AK108725.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-C09, full insert sequence Length = 1602 Score = 133 bits (67), Expect = 6e-28 Identities = 72/74 (97%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 880 gtgagctaactccaacaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 939 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 940 aagcaggaatcgct 953
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 133 bits (67), Expect = 6e-28 Identities = 72/74 (97%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 139269 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 139210 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 139209 aagccggaatcgct 139196 Score = 133 bits (67), Expect = 6e-28 Identities = 72/74 (97%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 103156 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 103215 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 103216 aagccggaatcgct 103229
>gb|AY168732.2| Angiosperm environmental sample clone Hot Creek 1 16S ribosomal RNA gene, partial sequence; chloroplast Length = 1451 Score = 133 bits (67), Expect = 6e-28 Identities = 72/74 (97%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 240 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 181 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 180 aagccggaatcgct 167
>gb|U76911.1|CPU76911 Carica papaya 16S ribosomal RNA, chloroplast gene for chloroplast RNA, partial sequence Length = 1563 Score = 133 bits (67), Expect = 6e-28 Identities = 72/74 (97%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1202 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 1261 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 1262 aagccggaatcgct 1275
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 133 bits (67), Expect = 6e-28 Identities = 72/74 (97%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 136418 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 136359 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 136358 aagccggaatcgct 136345 Score = 133 bits (67), Expect = 6e-28 Identities = 72/74 (97%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 102231 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 102290 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 102291 aagccggaatcgct 102304
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 133 bits (67), Expect = 6e-28 Identities = 72/74 (97%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 135455 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 135396 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 135395 aagccggaatcgct 135382 Score = 133 bits (67), Expect = 6e-28 Identities = 72/74 (97%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 101414 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 101473 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 101474 aagccggaatcgct 101487
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 133 bits (67), Expect = 6e-28 Identities = 72/74 (97%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 142399 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 142340 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 142339 aagccggaatcgct 142326 Score = 133 bits (67), Expect = 6e-28 Identities = 72/74 (97%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 106900 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 106959 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 106960 aagccggaatcgct 106973
>emb|Y10178.1|CPAC16SR A.cepa chloroplast 16S rRNA gene Length = 678 Score = 133 bits (67), Expect = 6e-28 Identities = 72/74 (97%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 475 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 534 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 535 aagccggaatcgct 548
>emb|AJ007728.1|OMI007728 Orobanche minor chloroplast trnV(GAC) gene, 16S rRNA gene, trnI(GAU) pseudogene, trnA(UGC) pseudogene and partial 23S rRNA gene Length = 2604 Score = 133 bits (67), Expect = 6e-28 Identities = 72/74 (97%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1567 gtgagctaaccccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 1626 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 1627 aagcaggaatcgct 1640
>emb|AJ428862.1|RHI428862 Unidentified cyanobacterium DBD2002 partial 16S rRNA gene Length = 757 Score = 133 bits (67), Expect = 6e-28 Identities = 72/74 (97%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 516 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 575 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 576 aagccggaatcgct 589
>gb|L37580.1|RCNRGD Ricinis communis 16S ribosomal RNA (16S rRNA) gene Length = 1423 Score = 133 bits (67), Expect = 6e-28 Identities = 72/74 (97%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1197 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 1256 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 1257 aagccggaatcgct 1270
>emb|AJ440719.1|OIN440719 Putative agent of rhinosporidiosis partial 16S rRNA gene Length = 1458 Score = 133 bits (67), Expect = 6e-28 Identities = 72/74 (97%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1217 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 1276 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 1277 aagccggaatcgct 1290
>gb|AY357981.1| Uncultured actinobacterium cEV42 16S ribosomal RNA gene, partial sequence Length = 566 Score = 131 bits (66), Expect = 3e-27 Identities = 71/73 (97%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 494 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 553 Query: 61 aagcaggaatcgc 73 |||| |||||||| Sbjct: 554 aagccggaatcgc 566
>gb|AY911449.1| Uncultured Mycobacterium sp. clone NEC03091 16S ribosomal RNA gene, partial sequence Length = 1249 Score = 129 bits (65), Expect = 1e-26 Identities = 70/72 (97%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| Sbjct: 1178 gtgagctaactccaaaaacccgtcctcagttcggattacaggctgcaactcgcctgcatg 1237 Query: 61 aagcaggaatcg 72 |||||||||||| Sbjct: 1238 aagcaggaatcg 1249
>gb|DQ013044.1| Lactuca sativa NADH dehydrogenase subunit 2 (ndhB) gene, partial cds; ribosomal protein S7 (rps7) gene, complete cds; ribosomal protein S12 (rps12) gene, partial cds; tRNA-Val, 16S ribosomal RNA, tRNA-Ile, and tRNA-Ala genes, complete sequence; 23S ribosomal RNA gene, partial sequence; and unknown gene; chloroplast Length = 8165 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 5426 gtgagctaaccccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 5485 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 5486 aagccggaatcgct 5499
>gb|AY895148.1| Chloroplast transformation vector pCLT327 Cry1Ab (cry1Ab) and AadA (aadA) genes, complete cds; tRNA-Val gene, complete sequence; and 16S ribosomal RNA, partial sequence Length = 8483 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 8381 gtgagctaactccaaaaacccgtcctcagttcggattgtaggctgcaactcgcctgcatg 8440 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 8441 aagccggaatcgct 8454
>gb|AF526941.1| Uncultured angiosperm clone T5-20 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1497 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 289 gtgagctaaccccaaaaacccgtcctcagttcggattgtaggctgcaactcgcctgcatg 230 Query: 61 aagcaggaatcgct 74 |||||||||||||| Sbjct: 229 aagcaggaatcgct 216
>gb|AY563527.1| Camellia sinensis 16S ribosomal RNA gene, partial sequence Length = 699 Score = 125 bits (63), Expect = 2e-25 Identities = 68/70 (97%) Strand = Plus / Plus Query: 5 gctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaagc 64 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 539 gctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagc 598 Query: 65 aggaatcgct 74 ||||||||| Sbjct: 599 cggaatcgct 608
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 138649 gtgagctaaccccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 138590 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 138589 aagccggaatcgct 138576 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 103981 gtgagctaaccccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 104040 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 104041 aagccggaatcgct 104054
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 138458 gtgagctaactccaaaaacccgtcctcagttcggattgtaggctgcaactcgcctgcatg 138399 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 138398 aagccggaatcgct 138385 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 103451 gtgagctaactccaaaaacccgtcctcagttcggattgtaggctgcaactcgcctgcatg 103510 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 103511 aagccggaatcgct 103524
>emb|Y18934.1|CPY18934 Solanum nigrum chloroplast tRNA-Ala, tRNA-Ile, 16S rRNA, tRNA-Val, rps12, rps7, ndhB genes Length = 7829 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 2343 gtgagctaaccccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 2284 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 2283 aagccggaatcgct 2270
>emb|X72584.1|CHCRTRNAV C.reflexa chloroplast genes trnA, trnI, trnV, rps7, rpS12, ndhB and 16S rDNA Length = 8807 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 2531 gtgagctaaccccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 2472 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 2471 aagccggaatcgct 2458
>emb|X07675.1|CHGMX Soybean plastid DNA for rps12, rps7, 16S rRNA, tRNA-Val, NADH dehydrogenase and ORF 143 Length = 5680 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 275 gtgagctaactccaaaaacccgtcctcagttcggattgtaggctgcaactcgcctgcatg 216 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 215 aagccggaatcgct 202
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 134279 gtgagctaaccccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 134220 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 134219 aagccggaatcgct 134206 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 99166 gtgagctaaccccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 99225 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 99226 aagccggaatcgct 99239
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 139269 gtgagctaaccccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 139210 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 139209 aagccggaatcgct 139196 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 104288 gtgagctaaccccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 104347 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 104348 aagccggaatcgct 104361
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| Sbjct: 146107 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaagtcgcctgcatg 146048 Query: 61 aagcaggaatcgct 74 ||| |||||||||| Sbjct: 146047 aagtaggaatcgct 146034 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| Sbjct: 107221 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaagtcgcctgcatg 107280 Query: 61 aagcaggaatcgct 74 ||| |||||||||| Sbjct: 107281 aagtaggaatcgct 107294
>gb|DQ417652.1| Glechoma hederacea 16S ribosomal RNA gene, partial sequence; plastid Length = 1403 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1178 gtgagctaaccccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 1237 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 1238 aagccggaatcgct 1251
>gb|DQ417651.1| Lotus corniculatus 16S ribosomal RNA gene, partial sequence; plastid Length = 1409 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 1184 gtgagctaactccaaaaacccgtcctcagttcggattgtaggctgcaactcgcctgcatg 1243 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 1244 aagccggaatcgct 1257
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 138011 gtgagctaaccccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 137952 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 137951 aagccggaatcgct 137938 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 103025 gtgagctaaccccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 103084 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 103085 aagccggaatcgct 103098
>gb|AF372579.1|AF372579 Lespedeza cuneata 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 700 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 108 gtgagctaactccaaaaacccgtcctcagttcggattgtaggctgcaactcgcctgcatg 49 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 48 aagccggaatcgct 35
>gb|AY216521.1| Lycopersicon esculentum tRNA-Val gene, complete sequence; 16S ribosomal RNA gene, complete sequence; and tRNA-Ile and tRNA-Ala genes, complete sequence; chloroplast genes for chloroplast products Length = 5206 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 2833 gtgagctaaccccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 2892 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 2893 aagccggaatcgct 2906
>dbj|AB075086.1| Uncultured bacterium gene for 16S rRNA, partial sequence, clone:KCR15 Length = 507 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 287 gtgagctaaccccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 346 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 347 aagccggaatcgct 360
>dbj|AB075082.1| Uncultured bacterium gene for 16S rRNA, partial sequence, clone:KCR11 Length = 507 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 287 gtgagctaaccccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 346 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 347 aagccggaatcgct 360
>dbj|AB075075.1| Uncultured bacterium gene for 16S rRNA, partial sequence, clone:KCR3 Length = 507 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 287 gtgagctaaccccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 346 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 347 aagccggaatcgct 360
>gb|AY803217.1| Angiosperm environmental sample clone C82 16S ribosomal RNA gene, partial sequence; chloroplast Length = 545 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 305 gtgagctaaccccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 364 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 365 aagccggaatcgct 378
>gb|AY803214.1| Angiosperm environmental sample clone B92 16S ribosomal RNA gene, partial sequence; chloroplast Length = 546 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 305 gtgagctaaccccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 364 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 365 aagccggaatcgct 378
>gb|AY803199.1| Angiosperm environmental sample clone A20 16S ribosomal RNA gene, partial sequence; chloroplast Length = 546 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 305 gtgagctaaccccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 364 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 365 aagccggaatcgct 378
>dbj|AB189069.1| Silene latifolia chloroplast DNA, partial sequence, rpoB gene to rps7 gene region Length = 47249 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 43543 gtgagctaaccccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 43602 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 43603 aagccggaatcgct 43616
>emb|V00165.1|CHNTRN1 Tobacco chloroplast genes for 16S ribosomal RNA and tRNA-Val Length = 2113 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1844 gtgagctaaccccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 1903 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 1904 aagccggaatcgct 1917
>gb|AF143264.1| Vitis vinifera 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 493 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 120 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaacccgcctgcatg 61 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 60 aagccggaatcgct 47
>gb|AF141153.1|AF141153 Vigna unguiculata clone VU124KNF1-2 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 459 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 409 gtgagctaactccaaaaacccgtcctcagttcggattgtaggctgcaactcgcctgcatg 350 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 349 aagccggaatcgct 336
>gb|AF141146.1|AF141146 Vigna unguiculata clone TV72NBS3 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 378 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 244 gtgagctaactccaaaaacccgtcctcagttcggattgtaggctgcaactcgcctgcatg 303 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 304 aagccggaatcgct 317
>gb|AF141144.1|AF141144 Vigna unguiculata clone TV72NBS1 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 181 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 129 gtgagctaactccaaaaacccgtcctcagttcggattgtaggctgcaactcgcctgcatg 70 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 69 aagccggaatcgct 56
>gb|AF142336.1|AF142336 Vigna vexillata clone TVBA8 putative ribosomal RNA genomic sequence Length = 178 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 127 gtgagctaactccaaaaacccgtcctcagttcggattgtaggctgcaactcgcctgcatg 68 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 67 aagccggaatcgct 54
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 138147 gtgagctaaccccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 138088 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 138087 aagccggaatcgct 138074 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 103196 gtgagctaaccccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 103255 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 103256 aagccggaatcgct 103269
>gb|DQ211347.1| Plastid transformation vector pPRV110L, complete sequence Length = 4128 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 4022 gtgagctaaccccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 4081 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 4082 aagccggaatcgct 4095
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 138145 gtgagctaaccccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 138086 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 138085 aagccggaatcgct 138072 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 103193 gtgagctaaccccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 103252 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 103253 aagccggaatcgct 103266
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 138056 gtgagctaaccccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 137997 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 137996 aagccggaatcgct 137983 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 103072 gtgagctaaccccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 103131 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 103132 aagccggaatcgct 103145
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 138733 gtgagctaactccaaaaacccgtcctcagttcggattgtaggctgcaactcgcctgcatg 138674 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 138673 aagccggaatcgct 138660 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 103674 gtgagctaactccaaaaacccgtcctcagttcggattgtaggctgcaactcgcctgcatg 103733 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 103734 aagccggaatcgct 103747
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 134573 gtgagctaactccaaaaacccgtcctcagttcggattgtaggctgcaactcgcctgcatg 134514 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 134513 aagccggaatcgct 134500 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 100821 gtgagctaactccaaaaacccgtcctcagttcggattgtaggctgcaactcgcctgcatg 100880 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 100881 aagccggaatcgct 100894
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 136913 gtgagctaaccccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 136854 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 136853 aagccggaatcgct 136840 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 101058 gtgagctaaccccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 101117 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 101118 aagccggaatcgct 101131
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 138647 gtgagctaaccccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 138588 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 138587 aagccggaatcgct 138574 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 103979 gtgagctaaccccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 104038 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 104039 aagccggaatcgct 104052
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 132988 gtgagctaactccaaaaacccgtcctcagttcggattgtaggctgcaactcgcctgcatg 132929 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 132928 aagccggaatcgct 132915 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 99468 gtgagctaactccaaaaacccgtcctcagttcggattgtaggctgcaactcgcctgcatg 99527 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 99528 aagccggaatcgct 99541
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 138388 gtgagctaaccccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 138329 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 138328 aagccggaatcgct 138315 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 103750 gtgagctaaccccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 103809 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 103810 aagccggaatcgct 103823
>gb|AY575999.1| Chloroplast transformation vector pCLT312, plastid targeting sequence Length = 4508 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 4406 gtgagctaactccaaaaacccgtcctcagttcggattgtaggctgcaactcgcctgcatg 4465 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 4466 aagccggaatcgct 4479
>gb|DQ201846.1| Stevia rebaudiana 16S ribosomal RNA gene, partial sequence; plastid Length = 692 Score = 125 bits (63), Expect = 2e-25 Identities = 68/70 (97%) Strand = Plus / Plus Query: 5 gctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaagc 64 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 536 gctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagc 595 Query: 65 aggaatcgct 74 ||||||||| Sbjct: 596 cggaatcgct 605
>emb|X06428.1|CHGMV16S Soybean chloroplast DNA for tRNA-Val and 16S rRNA Length = 2000 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 1726 gtgagctaactccaaaaacccgtcctcagttcggattgtaggctgcaactcgcctgcatg 1785 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 1786 aagccggaatcgct 1799
>emb|X70938.1|CHNPTRNVI N.plumbaginifolia chloroplast 16SrDNA, trnV and trnI genes for 16S ribosomal RNA, transfer RNA-Val and transfer RNA-Ile (5'exon) Length = 3274 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 2443 gtgagctaaccccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 2502 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 2503 aagccggaatcgct 2516
>emb|AJ401354.1|CEU401354 Cuscuta europaea chloroplast 16S rRNA gene Length = 1894 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1414 gtgagctaaccccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 1473 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 1474 aagccggaatcgct 1487
>gb|U12815.1|XXU12815 Transformation vector pPRV112B, plastid targeting segment Length = 4126 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 107 gtgagctaaccccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 48 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 47 aagccggaatcgct 34
>gb|U12814.1|XXU12814 Transformation vector pPRV112A, plastid targeting segment Length = 4126 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 107 gtgagctaaccccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 48 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 47 aagccggaatcgct 34
>gb|U12813.1|XXU12813 Transformation vector pPRV111B, plastid targeting segment Length = 4174 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 107 gtgagctaaccccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 48 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 47 aagccggaatcgct 34
>gb|U12812.1|XXU12812 Transformation vector pPRV111A, plastid targeting segment Length = 4174 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 107 gtgagctaaccccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 48 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 47 aagccggaatcgct 34
>gb|U12811.1|XXU12811 Transformation vector pPRV100B, plastid targeting segment Length = 3019 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 107 gtgagctaaccccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 48 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 47 aagccggaatcgct 34
>gb|U12810.1|XXU12810 Transformation vector pPRV100A, plastid targeting segment Length = 3019 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 107 gtgagctaaccccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 48 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 47 aagccggaatcgct 34
>gb|U12809.1|XXU12809 Transformation vector pPRV1, plastid targeting seqment Length = 2962 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 107 gtgagctaaccccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 48 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 47 aagccggaatcgct 34
>gb|L37578.1|ADQRGD Adriana glabrata 16S ribosomal RNA (16S rRNA) gene Length = 1428 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1191 gtgagctaactccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 1250 Query: 61 aagcaggaatcgct 74 ||| ||||||||| Sbjct: 1251 aagtcggaatcgct 1264
>gb|M82900.1|TOBCP16SRD Nicotiana plumbaginifolia 16S rRNA gene Length = 1490 Score = 125 bits (63), Expect = 2e-25 Identities = 71/74 (95%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1219 gtgagctaaccccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 1278 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 1279 aagccggaatcgct 1292
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 123 bits (62), Expect = 6e-25 Identities = 70/73 (95%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 138025 gtgagctaaccccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 137966 Query: 61 aagcaggaatcgc 73 |||| |||||||| Sbjct: 137965 aagccggaatcgc 137953 Score = 123 bits (62), Expect = 6e-25 Identities = 70/73 (95%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 103037 gtgagctaaccccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 103096 Query: 61 aagcaggaatcgc 73 |||| |||||||| Sbjct: 103097 aagccggaatcgc 103109
>emb|AJ278626.1|CRE278626 Cuscuta reflexa chloroplast tRNA-Val(GAC) gene and 16S rRNA gene Length = 2191 Score = 123 bits (62), Expect = 6e-25 Identities = 70/73 (95%) Strand = Plus / Plus Query: 2 tgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatga 61 ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1610 tgagctaaccccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatga 1669 Query: 62 agcaggaatcgct 74 ||| ||||||||| Sbjct: 1670 agccggaatcgct 1682
>gb|DQ494144.1| Uncultured cyanobacterium 16S ribosomal RNA gene, partial sequence Length = 414 Score = 121 bits (61), Expect = 2e-24 Identities = 68/71 (95%) Strand = Plus / Plus Query: 4 agctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaag 63 |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| Sbjct: 285 agctaactccaaaaacccgtnctcagttcggattgcaggctgcaactcgcctgcatgaag 344 Query: 64 caggaatcgct 74 | ||||||||| Sbjct: 345 ccggaatcgct 355
>emb|AJ278625.1|CSU278625 Cuscuta subinclusa chloroplast tRNA-Val(GAC) gene and 16S rRNA gene Length = 2452 Score = 121 bits (61), Expect = 2e-24 Identities = 69/72 (95%) Strand = Plus / Plus Query: 3 gagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaa 62 |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1922 gagctaaccccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaa 1981 Query: 63 gcaggaatcgct 74 || ||||||||| Sbjct: 1982 gccggaatcgct 1993
>emb|AJ278624.1|COD278624 Cuscuta odorata chloroplast tRNA-Val(GAC) gene and 16S rRNA gene Length = 2231 Score = 121 bits (61), Expect = 2e-24 Identities = 69/72 (95%) Strand = Plus / Plus Query: 3 gagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaa 62 |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1797 gagctaaccccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaa 1856 Query: 63 gcaggaatcgct 74 || ||||||||| Sbjct: 1857 gccggaatcgct 1868
>emb|AJ278623.1|CGR278623 Cuscuta gronovii chloroplast tRNA-Val(GAC) gene and 16S rRNA gene Length = 2291 Score = 121 bits (61), Expect = 2e-24 Identities = 69/72 (95%) Strand = Plus / Plus Query: 3 gagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaa 62 |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1844 gagctaaccccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaa 1903 Query: 63 gcaggaatcgct 74 || ||||||||| Sbjct: 1904 gccggaatcgct 1915
>emb|AJ401355.1|CPL401355 Cuscuta platyloba chloroplast 16S rRNA gene Length = 1998 Score = 121 bits (61), Expect = 2e-24 Identities = 69/72 (95%) Strand = Plus / Plus Query: 3 gagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaa 62 |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1470 gagctaaccccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaa 1529 Query: 63 gcaggaatcgct 74 || ||||||||| Sbjct: 1530 gccggaatcgct 1541
>emb|AJ401353.1|CCA401353 Cuscuta campestris chloroplast 16S rRNA gene Length = 1990 Score = 121 bits (61), Expect = 2e-24 Identities = 69/72 (95%) Strand = Plus / Plus Query: 3 gagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaa 62 |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 1467 gagctaaccccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaa 1526 Query: 63 gcaggaatcgct 74 || ||||||||| Sbjct: 1527 gccggaatcgct 1538
>gb|AY818945.1| Plantago rugelii 16S ribosomal RNA (rrn16) gene, partial sequence; chloroplast Length = 1402 Score = 119 bits (60), Expect = 1e-23 Identities = 68/71 (95%) Strand = Plus / Plus Query: 4 agctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaag 63 ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1184 agctaaccccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaag 1243 Query: 64 caggaatcgct 74 | ||||||||| Sbjct: 1244 ccggaatcgct 1254
>gb|AF419692.1| Uncultured bacterium C1_B022 16S ribosomal RNA gene, partial sequence Length = 1461 Score = 119 bits (60), Expect = 1e-23 Identities = 68/71 (95%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1218 gtgagctaaccccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 1277 Query: 61 aagcaggaatc 71 |||| |||||| Sbjct: 1278 aagccggaatc 1288
>gb|AC151803.1| Solanum demissum chromosome 5 BAC PGEC979H09 genomic sequence, complete sequence Length = 110954 Score = 117 bits (59), Expect = 4e-23 Identities = 70/74 (94%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||| Sbjct: 35103 gtgagctaaccccaaaaacccttcctcagttcggattgcaggctgcaactcgcctgcatg 35162 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 35163 aagccggaatcgct 35176
>emb|X58864.1|CARRN16S C.americana plastid 16S rRNA gene and spacer region Length = 1978 Score = 117 bits (59), Expect = 4e-23 Identities = 70/74 (94%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||| || |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1309 gtgagctaacccccaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 1368 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 1369 aagccggaatcgct 1382
>gb|DQ129642.1| Uncultured bacterium clone AKIW415 16S ribosomal RNA gene, partial sequence Length = 1449 Score = 117 bits (59), Expect = 4e-23 Identities = 70/74 (94%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||| Sbjct: 1210 gtgagctaactccaaaaacccgtcctcagttcggattgtaggctgcaactcgcctacatg 1269 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 1270 aagccggaatcgct 1283
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 117 bits (59), Expect = 4e-23 Identities = 71/74 (95%), Gaps = 1/74 (1%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| Sbjct: 144824 gtgagctaactccaaaa-cccgtcctcagttcggattgcaggctgcaactcgcctgcatg 144766 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 144765 aagccggaatcgct 144752 Score = 117 bits (59), Expect = 4e-23 Identities = 71/74 (95%), Gaps = 1/74 (1%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| Sbjct: 108833 gtgagctaactccaaaa-cccgtcctcagttcggattgcaggctgcaactcgcctgcatg 108891 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 108892 aagccggaatcgct 108905
>gb|AY803212.1| Angiosperm environmental sample clone B63 16S ribosomal RNA gene, partial sequence; chloroplast Length = 546 Score = 117 bits (59), Expect = 4e-23 Identities = 70/74 (94%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||| Sbjct: 305 gtgagctaaccccaaaaacccgtcctcagttcggattgcgggctgcaactcgcctgcatg 364 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 365 aagccggaatcgct 378
>emb|X73670.1|CHDC16SRR D.carota chloroplast gene for tRNA-Val, 16S rRNA and tRNA-Ile (exon 1) Length = 2192 Score = 117 bits (59), Expect = 4e-23 Identities = 70/74 (94%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||| Sbjct: 1517 gtgagctaaccccaaaaacccgtcctcagttgggattgcaggctgcaactcgcctgcatg 1576 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 1577 aagccggaatcgct 1590
>gb|AF141149.1|AF141149 Vigna unguiculata clone TV72NBS4 16S ribosomal RNA gene, partial sequence Length = 397 Score = 117 bits (59), Expect = 4e-23 Identities = 70/74 (94%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||| Sbjct: 261 gtgagctaactccaaaaacccgtcctcagttcggattgtaggctgcaacacgcctgcatg 320 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 321 aagccggaatcgct 334
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 117 bits (59), Expect = 4e-23 Identities = 71/74 (95%), Gaps = 1/74 (1%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| Sbjct: 130535 gtgagctaactccaaaa-cccgtcctcagttcggattgcaggctgcaactcgcctgcatg 130477 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 130476 aagccggaatcgct 130463 Score = 117 bits (59), Expect = 4e-23 Identities = 71/74 (95%), Gaps = 1/74 (1%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| Sbjct: 104387 gtgagctaactccaaaa-cccgtcctcagttcggattgcaggctgcaactcgcctgcatg 104445 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 104446 aagccggaatcgct 104459
>gb|U03555.1|AIU03555 Alnus incana chloroplast 16S rRNA gene, complete sequence Length = 1842 Score = 117 bits (59), Expect = 4e-23 Identities = 70/74 (94%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 1395 gtgagctaaccccaaaaacccgtcctcagttcggattgtaggctgcaactcgcctgcatg 1454 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 1455 aagccggaatcgct 1468
>gb|DQ401208.1| Uncultured Pseudomonas sp. clone cloMSN28 16S ribosomal RNA gene, partial sequence Length = 563 Score = 115 bits (58), Expect = 2e-22 Identities = 69/73 (94%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||| || |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 491 gtgagctaaccccgaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatg 550 Query: 61 aagcaggaatcgc 73 |||| |||||||| Sbjct: 551 aagccggaatcgc 563
>gb|AY942965.1| Uncultured phototrophic eukaryote clone 39 16S ribosomal RNA gene, partial sequence; plastid Length = 964 Score = 113 bits (57), Expect = 6e-22 Identities = 68/72 (94%) Strand = Plus / Plus Query: 3 gagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaa 62 |||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||| Sbjct: 746 gagctaactccaaaaacccgtcctcagttcggattgtaggctgcaactcgcctacatgaa 805 Query: 63 gcaggaatcgct 74 || ||||||||| Sbjct: 806 gccggaatcgct 817
>gb|AY942941.1| Uncultured Flavobacterium sp. clone 7 16S ribosomal RNA gene, partial sequence Length = 961 Score = 113 bits (57), Expect = 6e-22 Identities = 68/72 (94%) Strand = Plus / Plus Query: 3 gagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaa 62 |||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||| Sbjct: 743 gagctaactccaaaaacccgtcctcagttcggattgtaggctgcaactcgcctacatgaa 802 Query: 63 gcaggaatcgct 74 || ||||||||| Sbjct: 803 gccggaatcgct 814
>gb|U47845.1|CRU47845 Cytinus ruber 16S ribosomal RNA gene, chloroplast gene for chloroplast RNA, partial sequence Length = 1418 Score = 113 bits (57), Expect = 6e-22 Identities = 65/68 (95%) Strand = Plus / Plus Query: 7 taactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaagcag 66 |||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| | Sbjct: 1191 taactccaaaaacctgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccg 1250 Query: 67 gaatcgct 74 |||||||| Sbjct: 1251 gaatcgct 1258
>dbj|AP006646.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT04I09, TM0269b, complete sequence Length = 66087 Score = 113 bits (57), Expect = 6e-22 Identities = 68/72 (94%) Strand = Plus / Minus Query: 3 gagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaa 62 ||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 49731 gagctaactccaaaaactcgtcctcagttcggattgtaggctgcaactcgcctgcatgaa 49672 Query: 63 gcaggaatcgct 74 || ||||||||| Sbjct: 49671 gccggaatcgct 49660
>gb|AY846052.1| Uncultured soil bacterium clone G12-7 16S ribosomal RNA gene, partial sequence Length = 428 Score = 111 bits (56), Expect = 2e-21 Identities = 61/63 (96%) Strand = Plus / Plus Query: 12 ccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaagcaggaatc 71 ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 310 ccaaaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagctggaatc 369 Query: 72 gct 74 ||| Sbjct: 370 gct 372
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 109 bits (55), Expect = 9e-21 Identities = 69/74 (93%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||| ||||||||||||||||||||||| |||||| |||||||||| ||||||| Sbjct: 54966 gtgagctaaccccaaaaacccgtcctcagttcggattgcagactgcaactcgtctgcatg 54907 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 54906 aagccggaatcgct 54893 Score = 109 bits (55), Expect = 9e-21 Identities = 69/74 (93%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||| ||||||||||||||||||||||| |||||| |||||||||| ||||||| Sbjct: 34862 gtgagctaaccccaaaaacccgtcctcagttcggattgcagactgcaactcgtctgcatg 34921 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 34922 aagccggaatcgct 34935
>gb|AC151668.38| Medicago truncatula clone mth2-6e22, complete sequence Length = 110949 Score = 109 bits (55), Expect = 9e-21 Identities = 69/74 (93%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 ||||||||||| |||||||||||||||||||||| ||| |||||||||||||||| |||| Sbjct: 1766 gtgagctaacttcaaaaacccgtcctcagttcggattgtaggctgcaactcgcctacatg 1825 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 1826 aagccggaatcgct 1839
>gb|DQ129644.1| Uncultured bacterium clone AKIW961 16S ribosomal RNA gene, partial sequence Length = 1448 Score = 109 bits (55), Expect = 9e-21 Identities = 66/70 (94%) Strand = Plus / Plus Query: 5 gctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaagc 64 |||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||| Sbjct: 1213 gctaactccaaaaacccgtcctcagttcggattgtaggctgcaactcgcctacatgaagc 1272 Query: 65 aggaatcgct 74 ||||||||| Sbjct: 1273 cggaatcgct 1282
>gb|DQ129643.1| Uncultured bacterium clone AKIW940 16S ribosomal RNA gene, partial sequence Length = 1447 Score = 109 bits (55), Expect = 9e-21 Identities = 66/70 (94%) Strand = Plus / Plus Query: 5 gctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaagc 64 |||||||||||||||||||||||||||||| ||| |||||||||||||||| |||||||| Sbjct: 1215 gctaactccaaaaacccgtcctcagttcggattgtaggctgcaactcgcctacatgaagc 1274 Query: 65 aggaatcgct 74 ||||||||| Sbjct: 1275 cggaatcgct 1284
>gb|AF372517.1|AF372517 Medicago sativa 16S ribosomal RNA gene, partial sequence; and tRNA-Ile and tRNA-Ala genes, complete sequence; chloroplast genes for chloroplast products Length = 2703 Score = 109 bits (55), Expect = 9e-21 Identities = 69/74 (93%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 ||||||||||| |||||||||||||||||||||| ||| |||||||||||||||| |||| Sbjct: 405 gtgagctaacttcaaaaacccgtcctcagttcggattgtaggctgcaactcgcctacatg 464 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 465 aagccggaatcgct 478
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 109 bits (55), Expect = 9e-21 Identities = 69/74 (93%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 ||||||||||| |||||||||||||||||||||| ||| |||||||||||||||| |||| Sbjct: 26159 gtgagctaacttcaaaaacccgtcctcagttcggattgtaggctgcaactcgcctacatg 26100 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 26099 aagccggaatcgct 26086
>emb|CT010572.8| M.truncatula DNA sequence from clone MTH2-161L21 on chromosome 3, complete sequence Length = 121331 Score = 109 bits (55), Expect = 9e-21 Identities = 69/74 (93%) Strand = Plus / Minus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 ||||||||||| |||||||||||||||||||||| ||| |||||||||||||||| |||| Sbjct: 82235 gtgagctaacttcaaaaacccgtcctcagttcggattgtaggctgcaactcgcctacatg 82176 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 82175 aagccggaatcgct 82162
>emb|X62099.1|CHEVIARRN E.virginiana plastid ribosomal RNA operon, trnI and trnA pseudogenes Length = 7395 Score = 109 bits (55), Expect = 9e-21 Identities = 69/74 (93%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||||||||| ||||||||||||||||||||||| |||||| |||||||||| ||||||| Sbjct: 1790 gtgagctaaccccaaaaacccgtcctcagttcggattgcagactgcaactcgtctgcatg 1849 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 1850 aagccggaatcgct 1863
>gb|L37579.1|EUFRGD Euphorbia pulcherrima 16S ribosomal RNA (16S rRNA) gene Length = 1420 Score = 107 bits (54), Expect = 4e-20 Identities = 67/74 (90%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 |||| |||||||| ||||||||||||||||||| || ||||||||||||| |||||||| Sbjct: 1194 gtgarctaactccmnaaacccgtcctcagttcggatttcaggctgcaactcscctgcatg 1253 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 1254 aagccggaatcgct 1267
>gb|AF525771.1|AF525770S2 Populus tomentosa 16S ribosomal RNA gene, partial sequence; and tRNA-Ile gene, complete sequence; chloroplast genes for chloroplast products Length = 590 Score = 105 bits (53), Expect = 1e-19 Identities = 58/60 (96%) Strand = Plus / Plus Query: 15 aaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaagcaggaatcgct 74 |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 1 aaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgct 60
>gb|AY219885.1| Lactuca sativa 16S ribosomal RNA gene, partial sequence; and tRNA-Ile (trnI) and tRNA-Ala (trnA) genes, complete sequence; plastid genes for plastid products Length = 2529 Score = 105 bits (53), Expect = 1e-19 Identities = 58/60 (96%) Strand = Plus / Plus Query: 15 aaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaagcaggaatcgct 74 |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 1 aaaacccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgct 60
>gb|AF244551.1|AF244551 Cycas revoluta 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1469 Score = 105 bits (53), Expect = 1e-19 Identities = 67/72 (93%) Strand = Plus / Plus Query: 3 gagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaa 62 |||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 1209 gagctaacctcaaaaacccggcctcagttcggattgcaggctgcaactcgcctgcatgaa 1268 Query: 63 gcaggaatcgct 74 || ||||||||| Sbjct: 1269 gccggaatcgct 1280
>gb|AF393578.1| Bazzania trilobata small subunit ribosomal RNA (rrs) gene, partial sequence; chloroplast gene for chloroplast product Length = 1464 Score = 105 bits (53), Expect = 1e-19 Identities = 67/72 (93%) Strand = Plus / Plus Query: 3 gagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaa 62 |||||||| ||||||||| | ||||||||||| ||||||||||||||||||||||||||| Sbjct: 1195 gagctaaccccaaaaacctggcctcagttcggattgcaggctgcaactcgcctgcatgaa 1254 Query: 63 gcaggaatcgct 74 || ||||||||| Sbjct: 1255 gccggaatcgct 1266
>gb|U24589.1|OEU24589 Ophioglossum engelmannii chloroplast 16S rRNA gene, partial sequence Length = 1425 Score = 105 bits (53), Expect = 1e-19 Identities = 67/72 (93%) Strand = Plus / Plus Query: 3 gagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaa 62 |||||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 1195 gagctaacctcaaaaacccgacctcagttcggattgcaggctgcaactcgcctgcatgaa 1254 Query: 63 gcaggaatcgct 74 || ||||||||| Sbjct: 1255 gccggaatcgct 1266
>emb|X04465.1|CHMPXX Marchantia polymorpha chloroplast genome DNA Length = 121024 Score = 103 bits (52), Expect = 6e-19 Identities = 66/71 (92%) Strand = Plus / Minus Query: 4 agctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaag 63 ||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 118783 agctaacctcaaaaacccggcctcagttcggattgcaggctgcaactcgcctgcatgaag 118724 Query: 64 caggaatcgct 74 | ||||||||| Sbjct: 118723 ccggaatcgct 118713 Score = 103 bits (52), Expect = 6e-19 Identities = 66/71 (92%) Strand = Plus / Plus Query: 4 agctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaag 63 ||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 83337 agctaacctcaaaaacccggcctcagttcggattgcaggctgcaactcgcctgcatgaag 83396 Query: 64 caggaatcgct 74 | ||||||||| Sbjct: 83397 ccggaatcgct 83407
>gb|DQ416274.1| Uncultured bacterium clone s3ub39 16S ribosomal RNA gene, partial sequence Length = 662 Score = 103 bits (52), Expect = 6e-19 Identities = 66/71 (92%) Strand = Plus / Plus Query: 4 agctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaag 63 ||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 483 agctaacctcaaaaacccggcctcagttcggattgcaggctgcaactcgcctgcatgaag 542 Query: 64 caggaatcgct 74 | ||||||||| Sbjct: 543 ccggaatcgct 553
>gb|AF393576.1| Anthoceros punctatus small subunit ribosomal RNA (rrs) gene, partial sequence; tRNA-Ile (trnI(gau)) and tRNA-Ala (trnA(ugc)) genes, complete sequence; large subunit ribosomal RNA (rrl) and 5S ribosomal RNA (rrf) genes, complete sequence; and tRNA-Arg (trnR(acg)) gene, partial sequence; chloroplast genes for chloroplast products Length = 8235 Score = 103 bits (52), Expect = 6e-19 Identities = 66/71 (92%) Strand = Plus / Plus Query: 4 agctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaag 63 ||||||| ||||||||||| ||||||||| | |||||||||||||||||||||||||||| Sbjct: 1200 agctaaccccaaaaacccggcctcagttcagattgcaggctgcaactcgcctgcatgaag 1259 Query: 64 caggaatcgct 74 | ||||||||| Sbjct: 1260 ccggaatcgct 1270
>gb|AY228468.1| Pinus Koraiensis chloroplast, complete genome Length = 116866 Score = 103 bits (52), Expect = 6e-19 Identities = 66/71 (92%) Strand = Plus / Plus Query: 4 agctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaag 63 ||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 83473 agctaacctcaaaaacccggcctcagttcggattgcaggctgcaactcgcctgcatgaag 83532 Query: 64 caggaatcgct 74 | ||||||||| Sbjct: 83533 ccggaatcgct 83543
>dbj|AB179516.1| Uncultured bacterium gene for 16S rRNA, partial sequence, clone: MIZ25 Length = 1454 Score = 103 bits (52), Expect = 6e-19 Identities = 60/63 (95%) Strand = Plus / Plus Query: 12 ccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaagcaggaatc 71 ||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1225 ccaaaaaaccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagctggaatc 1284 Query: 72 gct 74 ||| Sbjct: 1285 gct 1287
>gb|AF244554.1|AF244554 Ginkgo biloba 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1455 Score = 103 bits (52), Expect = 6e-19 Identities = 66/71 (92%) Strand = Plus / Plus Query: 4 agctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaag 63 ||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 1204 agctaacctcaaaaacccggcctcagttcggattgcaggctgcaactcgcctgcatgaag 1263 Query: 64 caggaatcgct 74 | ||||||||| Sbjct: 1264 ccggaatcgct 1274
>gb|AF393613.1| Sphagnum rubellum small subunit ribosomal RNA (rrs) gene, partial sequence; chloroplast gene for chloroplast product Length = 1467 Score = 103 bits (52), Expect = 6e-19 Identities = 66/71 (92%) Strand = Plus / Plus Query: 4 agctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaag 63 ||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 1199 agctaacctcaaaaacccggcctcagttcggattgcaggctgcaactcgcctgcatgaag 1258 Query: 64 caggaatcgct 74 | ||||||||| Sbjct: 1259 ccggaatcgct 1269
>gb|AF393607.1| Pellia neesiana small subunit ribosomal RNA (rrs) gene, partial sequence; chloroplast gene for chloroplast product Length = 1468 Score = 103 bits (52), Expect = 6e-19 Identities = 66/71 (92%) Strand = Plus / Plus Query: 4 agctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaag 63 ||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 1200 agctaacctcaaaaacccggcctcagttcggattgcaggctgcaactcgcctgcatgaag 1259 Query: 64 caggaatcgct 74 | ||||||||| Sbjct: 1260 ccggaatcgct 1270
>gb|AF393588.1| Climacium dendroides small subunit ribosomal RNA (rrs) gene, partial sequence; chloroplast gene for chloroplast product Length = 1468 Score = 103 bits (52), Expect = 6e-19 Identities = 66/71 (92%) Strand = Plus / Plus Query: 4 agctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaag 63 ||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 1200 agctaacctcaaaaacccggcctcagttcggattgcaggctgcaactcgcctgcatgaag 1259 Query: 64 caggaatcgct 74 | ||||||||| Sbjct: 1260 ccggaatcgct 1270
>gb|AY555786.1| Uncultured bacterium clone PK50 16S ribosomal RNA gene, partial sequence Length = 1441 Score = 103 bits (52), Expect = 6e-19 Identities = 60/63 (95%) Strand = Plus / Plus Query: 12 ccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaagcaggaatc 71 ||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1231 ccaaaaagccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagctggaatc 1290 Query: 72 gct 74 ||| Sbjct: 1291 gct 1293
>gb|AF152609.1|AF152609 Pellia neesiana 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 691 Score = 103 bits (52), Expect = 6e-19 Identities = 66/71 (92%) Strand = Plus / Plus Query: 4 agctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaag 63 ||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 472 agctaacctcaaaaacccggcctcagttcggattgcaggctgcaactcgcctgcatgaag 531 Query: 64 caggaatcgct 74 | ||||||||| Sbjct: 532 ccggaatcgct 542
>gb|AF058678.1|AF058678 Takakia lepidozioides small subunit ribosomal RNA gene, chloroplast gene for chloroplast RNA, partial sequence Length = 1430 Score = 103 bits (52), Expect = 6e-19 Identities = 66/71 (92%) Strand = Plus / Plus Query: 4 agctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaag 63 ||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 1194 agctaacctcaaaaacccggcctcagttcggattgcaggctgcaactcgcctgcatgaag 1253 Query: 64 caggaatcgct 74 | ||||||||| Sbjct: 1254 ccggaatcgct 1264
>dbj|AB087477.1| Anthoceros formosae chloroplast 16S rRNA, complete sequence Length = 1614 Score = 103 bits (52), Expect = 6e-19 Identities = 66/71 (92%) Strand = Plus / Plus Query: 4 agctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaag 63 ||||||| ||||||||||| ||||||||| | |||||||||||||||||||||||||||| Sbjct: 1239 agctaaccccaaaaacccggcctcagttcagattgcaggctgcaactcgcctgcatgaag 1298 Query: 64 caggaatcgct 74 | ||||||||| Sbjct: 1299 ccggaatcgct 1309
>emb|AJ867671.1| Uncultured bacterium partial 16S rRNA gene, clone RS 8-Bact43 Length = 1489 Score = 103 bits (52), Expect = 6e-19 Identities = 66/71 (92%) Strand = Plus / Plus Query: 4 agctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaag 63 ||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 1242 agctaacctcaaaaacccggcctcagttcggattgcaggctgcaactcgcctgcatgaag 1301 Query: 64 caggaatcgct 74 | ||||||||| Sbjct: 1302 ccggaatcgct 1312
>emb|AJ867655.1| Uncultured phototrophic eukaryote partial 16S rRNA gene, clone RS 8-Bact67 Length = 1453 Score = 103 bits (52), Expect = 6e-19 Identities = 66/71 (92%) Strand = Plus / Plus Query: 4 agctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaag 63 ||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 1195 agctaacctcaaaaacccggcctcagttcggattgcaggctgcaactcgcctgcatgaag 1254 Query: 64 caggaatcgct 74 | ||||||||| Sbjct: 1255 ccggaatcgct 1265
>emb|AJ867654.1| Uncultured phototrophic eukaryote partial 16S rRNA gene, clone RS 8-Bact63 Length = 1442 Score = 103 bits (52), Expect = 6e-19 Identities = 66/71 (92%) Strand = Plus / Plus Query: 4 agctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaag 63 ||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 1196 agctaacctcaaaaacccggcctcagttcggattgcaggctgcaactcgcctgcatgaag 1255 Query: 64 caggaatcgct 74 | ||||||||| Sbjct: 1256 ccggaatcgct 1266
>emb|AJ867652.1| Uncultured phototrophic eukaryote partial 16S rRNA gene, clone RS 8-Bact35 Length = 1441 Score = 103 bits (52), Expect = 6e-19 Identities = 66/71 (92%) Strand = Plus / Plus Query: 4 agctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaag 63 ||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 1194 agctaacctcaaaaacccggcctcagttcggattgcaggctgcaactcgcctgcatgaag 1253 Query: 64 caggaatcgct 74 | ||||||||| Sbjct: 1254 ccggaatcgct 1264
>emb|AJ867651.1| Uncultured phototrophic eukaryote partial 16S rRNA gene, clone RS 8-Bact33 Length = 1476 Score = 103 bits (52), Expect = 6e-19 Identities = 66/71 (92%) Strand = Plus / Plus Query: 4 agctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaag 63 ||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 1229 agctaacctcaaaaacccggcctcagttcggattgcaggctgcaactcgcctgcatgaag 1288 Query: 64 caggaatcgct 74 | ||||||||| Sbjct: 1289 ccggaatcgct 1299
>emb|AJ867650.1| Uncultured phototrophic eukaryote partial 16S rRNA gene, clone RS 8-Bact24 Length = 1440 Score = 103 bits (52), Expect = 6e-19 Identities = 66/71 (92%) Strand = Plus / Plus Query: 4 agctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaag 63 ||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 1193 agctaacctcaaaaacccggcctcagttcggattgcaggctgcaactcgcctgcatgaag 1252 Query: 64 caggaatcgct 74 | ||||||||| Sbjct: 1253 ccggaatcgct 1263
>emb|AJ867649.1| Uncultured phototrophic eukaryote partial 16S rRNA gene, clone RS 8-Bact22 Length = 1416 Score = 103 bits (52), Expect = 6e-19 Identities = 66/71 (92%) Strand = Plus / Plus Query: 4 agctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaag 63 ||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 1309 agctaacctcaaaaacccggcctcagttcggattgcaggctgcaactcgcctgcatgaag 1368 Query: 64 caggaatcgct 74 | ||||||||| Sbjct: 1369 ccggaatcgct 1379
>emb|AJ867648.1| Uncultured phototrophic eukaryote partial 16S rRNA gene, clone RS 8-Bact02 Length = 1503 Score = 103 bits (52), Expect = 6e-19 Identities = 66/71 (92%) Strand = Plus / Plus Query: 4 agctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaag 63 ||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 1244 agctaacctcaaaaacccggcctcagttcggattgcaggctgcaactcgcctgcatgaag 1303 Query: 64 caggaatcgct 74 | ||||||||| Sbjct: 1304 ccggaatcgct 1314
>dbj|AB086179.1| Anthoceros formosae chloroplast DNA, complete genome Length = 161162 Score = 103 bits (52), Expect = 6e-19 Identities = 66/71 (92%) Strand = Plus / Minus Query: 4 agctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaag 63 ||||||| ||||||||||| ||||||||| | |||||||||||||||||||||||||||| Sbjct: 153935 agctaaccccaaaaacccggcctcagttcagattgcaggctgcaactcgcctgcatgaag 153876 Query: 64 caggaatcgct 74 | ||||||||| Sbjct: 153875 ccggaatcgct 153865 Score = 103 bits (52), Expect = 6e-19 Identities = 66/71 (92%) Strand = Plus / Plus Query: 4 agctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaag 63 ||||||| ||||||||||| ||||||||| | |||||||||||||||||||||||||||| Sbjct: 114731 agctaaccccaaaaacccggcctcagttcagattgcaggctgcaactcgcctgcatgaag 114790 Query: 64 caggaatcgct 74 | ||||||||| Sbjct: 114791 ccggaatcgct 114801
>dbj|AP005672.1| Physcomitrella patens subsp. patens chloroplast DNA, complete genome Length = 122890 Score = 103 bits (52), Expect = 6e-19 Identities = 66/71 (92%) Strand = Plus / Minus Query: 4 agctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaag 63 ||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 120521 agctaacctcaaaaacccggcctcagttcggattgcaggctgcaactcgcctgcatgaag 120462 Query: 64 caggaatcgct 74 | ||||||||| Sbjct: 120461 ccggaatcgct 120451 Score = 103 bits (52), Expect = 6e-19 Identities = 66/71 (92%) Strand = Plus / Plus Query: 4 agctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaag 63 ||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 87581 agctaacctcaaaaacccggcctcagttcggattgcaggctgcaactcgcctgcatgaag 87640 Query: 64 caggaatcgct 74 | ||||||||| Sbjct: 87641 ccggaatcgct 87651
>emb|AJ519369.1|UBA519369 Uncultured Holophaga sp. partial 16S rRNA gene, clone JG37-AG-39 Length = 1292 Score = 103 bits (52), Expect = 6e-19 Identities = 60/63 (95%) Strand = Plus / Plus Query: 12 ccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaagcaggaatc 71 ||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1190 ccaaaaagccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagctggaatc 1249 Query: 72 gct 74 ||| Sbjct: 1250 gct 1252
>gb|U24592.1|SPU24592 Sphagnum palustre chloroplast 16S rRNA gene, partial sequence Length = 1435 Score = 103 bits (52), Expect = 6e-19 Identities = 66/71 (92%) Strand = Plus / Plus Query: 4 agctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaag 63 ||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 1195 agctaacctcaaaaacccggcctcagttcggattgcaggctgcaactcgcctgcatgaag 1254 Query: 64 caggaatcgct 74 | ||||||||| Sbjct: 1255 ccggaatcgct 1265
>gb|U24594.1|OCU24594 Osmunda cinnamomea var. fokiensis chloroplast 16S rRNA gene, partial sequence Length = 1425 Score = 103 bits (52), Expect = 6e-19 Identities = 66/71 (92%) Strand = Plus / Plus Query: 4 agctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaag 63 ||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 1196 agctaacctcaaaaacccggcctcagttcggattgcaggctgcaactcgcctgcatgaag 1255 Query: 64 caggaatcgct 74 | ||||||||| Sbjct: 1256 ccggaatcgct 1266
>gb|U24587.1|LDU24587 Lycopodium digitatum chloroplast 16S rRNA gene, partial sequence Length = 1456 Score = 103 bits (52), Expect = 6e-19 Identities = 66/71 (92%) Strand = Plus / Plus Query: 4 agctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaag 63 ||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 1215 agctaacctcaaaaacccggcctcagttcggattgcaggctgcaactcgcctgcatgaag 1274 Query: 64 caggaatcgct 74 | ||||||||| Sbjct: 1275 ccggaatcgct 1285
>gb|U24581.1|BBU24581 Botrychium biternatum chloroplast 16S rRNA gene, partial sequence Length = 1425 Score = 103 bits (52), Expect = 6e-19 Identities = 66/71 (92%) Strand = Plus / Plus Query: 4 agctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaag 63 ||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 1196 agctaacctcaaaaacccgacctcagttcggattgcaggctgcaactcgcctgcatgaag 1255 Query: 64 caggaatcgct 74 | ||||||||| Sbjct: 1256 ccggaatcgct 1266
>gb|AY145653.1| Uncultured eukaryote FL12D05 16S ribosomal RNA gene, partial sequence; plastid gene for plastid product Length = 695 Score = 103 bits (52), Expect = 6e-19 Identities = 66/71 (92%) Strand = Plus / Minus Query: 4 agctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaag 63 ||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 236 agctaacctcaaaaacccggcctcagttcggattgcaggctgcaactcgcctgcatgaag 177 Query: 64 caggaatcgct 74 | ||||||||| Sbjct: 176 ccggaatcgct 166
>dbj|D17510.1|PINCPTRPG Pinus thunbergii chloroplast DNA, complete sequence Length = 119707 Score = 103 bits (52), Expect = 6e-19 Identities = 66/71 (92%) Strand = Plus / Plus Query: 4 agctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaag 63 ||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 85562 agctaacctcaaaaacccggcctcagttcggattgcaggctgcaactcgcctgcatgaag 85621 Query: 64 caggaatcgct 74 | ||||||||| Sbjct: 85622 ccggaatcgct 85632
>gb|AF407730.1| Uncultured bacterium clone B90 16S ribosomal RNA gene, partial sequence Length = 1485 Score = 101 bits (51), Expect = 2e-18 Identities = 59/62 (95%) Strand = Plus / Plus Query: 13 caaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaagcaggaatcg 72 |||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 1237 caaaaaaccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagctggaatcg 1296 Query: 73 ct 74 || Sbjct: 1297 ct 1298
>gb|DQ417653.1| Trifolium repens 16S ribosomal RNA gene, partial sequence; plastid Length = 1409 Score = 101 bits (51), Expect = 2e-18 Identities = 68/74 (91%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 ||||||||||| |||||||| ||||||||||||| ||| |||||||||||||||| |||| Sbjct: 1186 gtgagctaacttcaaaaacctgtcctcagttcggattgtaggctgcaactcgcctacatg 1245 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 1246 aagccggaatcgct 1259
>gb|AY803225.1| Uncultured bacterium clone D36 16S ribosomal RNA gene, partial sequence Length = 551 Score = 101 bits (51), Expect = 2e-18 Identities = 59/62 (95%) Strand = Plus / Plus Query: 13 caaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaagcaggaatcg 72 |||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 323 caaaaaaccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagctggaatcg 382 Query: 73 ct 74 || Sbjct: 383 ct 384
>gb|AF244563.1|AF244563 Polytrichum commune 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1486 Score = 101 bits (51), Expect = 2e-18 Identities = 59/62 (95%) Strand = Plus / Plus Query: 13 caaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaagcaggaatcg 72 |||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 1233 caaaaacccggcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcg 1292 Query: 73 ct 74 || Sbjct: 1293 ct 1294
>gb|AY846003.1| Uncultured soil bacterium clone G11-10 16S ribosomal RNA gene, partial sequence Length = 422 Score = 101 bits (51), Expect = 2e-18 Identities = 59/62 (95%) Strand = Plus / Plus Query: 13 caaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaagcaggaatcg 72 |||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 305 caaaaaaccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagctggaatcg 364 Query: 73 ct 74 || Sbjct: 365 ct 366
>gb|AY555795.1| Uncultured bacterium clone PK85 16S ribosomal RNA gene, partial sequence Length = 1428 Score = 101 bits (51), Expect = 2e-18 Identities = 59/62 (95%) Strand = Plus / Plus Query: 13 caaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaagcaggaatcg 72 |||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 1235 caaaaaaccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcg 1294 Query: 73 ct 74 || Sbjct: 1295 ct 1296
>gb|AY917801.1| Uncultured bacterium clone 1973c-25 16S ribosomal RNA gene, partial sequence Length = 818 Score = 101 bits (51), Expect = 2e-18 Identities = 59/62 (95%) Strand = Plus / Plus Query: 13 caaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaagcaggaatcg 72 |||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 588 caaaaaaccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagctggaatcg 647 Query: 73 ct 74 || Sbjct: 648 ct 649
>gb|AY689751.1| Uncultured Acidobacteria bacterium clone BDC3LA04 16S ribosomal RNA gene, partial sequence Length = 829 Score = 101 bits (51), Expect = 2e-18 Identities = 59/62 (95%) Strand = Plus / Plus Query: 13 caaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaagcaggaatcg 72 |||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 753 caaaaaaccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagctggaatcg 812 Query: 73 ct 74 || Sbjct: 813 ct 814
>gb|AY689706.1| Uncultured Acidobacteria bacterium clone BSR2SB12 16S ribosomal RNA gene, partial sequence Length = 812 Score = 101 bits (51), Expect = 2e-18 Identities = 59/62 (95%) Strand = Plus / Plus Query: 13 caaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaagcaggaatcg 72 |||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 738 caaaaaaccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagctggaatcg 797 Query: 73 ct 74 || Sbjct: 798 ct 799
>emb|X55033.1|CHPSRRNAO P.sativum chloroplast DNA of the single ribosomal RNA operon Length = 7920 Score = 101 bits (51), Expect = 2e-18 Identities = 68/74 (91%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 ||||||||||| |||||||| ||||||||||||| ||| |||||||||||||||| |||| Sbjct: 1958 gtgagctaacttcaaaaacctgtcctcagttcggattgtaggctgcaactcgcctacatg 2017 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 2018 aagccggaatcgct 2031
>emb|X51598.1|PS16SVAL P.sativum 16S rRNA & tRNA-Val chloroplast genes Length = 2315 Score = 101 bits (51), Expect = 2e-18 Identities = 68/74 (91%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 ||||||||||| |||||||| ||||||||||||| ||| |||||||||||||||| |||| Sbjct: 1692 gtgagctaacttcaaaaacctgtcctcagttcggattgtaggctgcaactcgcctacatg 1751 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 1752 aagccggaatcgct 1765
>gb|M37430.1|PEACPDKAA Pea Chloroplast 4.5S, 5S, 16S and 23S mRNA Length = 7920 Score = 101 bits (51), Expect = 2e-18 Identities = 68/74 (91%) Strand = Plus / Plus Query: 1 gtgagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatg 60 ||||||||||| |||||||| ||||||||||||| ||| |||||||||||||||| |||| Sbjct: 1958 gtgagctaacttcaaaaacctgtcctcagttcggattgtaggctgcaactcgcctacatg 2017 Query: 61 aagcaggaatcgct 74 |||| ||||||||| Sbjct: 2018 aagccggaatcgct 2031
>gb|AF407719.1| Uncultured bacterium clone B27 16S ribosomal RNA gene, partial sequence Length = 1505 Score = 99.6 bits (50), Expect = 9e-18 Identities = 58/61 (95%) Strand = Plus / Plus Query: 14 aaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaagcaggaatcgc 73 ||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 1241 aaaaaaccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagctggaatcgc 1300 Query: 74 t 74 | Sbjct: 1301 t 1301
>gb|AY566364.1| Uncultured Fibrobacteres/Acidobacteria group bacterium clone D202 16S ribosomal RNA gene, partial sequence Length = 424 Score = 99.6 bits (50), Expect = 9e-18 Identities = 58/61 (95%) Strand = Plus / Plus Query: 14 aaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaagcaggaatcgc 73 ||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 196 aaaaaaccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagctggaatcgc 255 Query: 74 t 74 | Sbjct: 256 t 256
>gb|DQ329773.1| Uncultured planctomycete clone 02D2Y04 16S ribosomal RNA gene, partial sequence Length = 856 Score = 97.6 bits (49), Expect = 4e-17 Identities = 61/64 (95%), Gaps = 1/64 (1%) Strand = Plus / Plus Query: 12 ccaaaaacccgt-cctcagttcggnttgcaggctgcaactcgcctgcatgaagcaggaat 70 |||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 761 ccaaaaacccgtgcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaat 820 Query: 71 cgct 74 |||| Sbjct: 821 cgct 824
>gb|AY345537.1| Unidentified bacterium clone LWSR-55 16S ribosomal RNA gene, partial sequence Length = 1480 Score = 97.6 bits (49), Expect = 4e-17 Identities = 66/72 (91%) Strand = Plus / Plus Query: 3 gagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaa 62 |||| ||| ||||||||| || |||||||||| ||||||||||||||||||||||||||| Sbjct: 1249 gagcgaaccccaaaaaccggttctcagttcggattgcaggctgcaactcgcctgcatgaa 1308 Query: 63 gcaggaatcgct 74 || ||||||||| Sbjct: 1309 gctggaatcgct 1320
>gb|AF244550.1|AF244550 Calypogeia muelleriana 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1481 Score = 97.6 bits (49), Expect = 4e-17 Identities = 66/72 (91%) Strand = Plus / Plus Query: 3 gagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaa 62 |||||||| ||||||| | | ||||||||||| ||||||||||||||||||||||||||| Sbjct: 1218 gagctaaccccaaaaatctggcctcagttcggattgcaggctgcaactcgcctgcatgaa 1277 Query: 63 gcaggaatcgct 74 || ||||||||| Sbjct: 1278 gccggaatcgct 1289
>gb|AF523988.1| Uncultured bacterium clone FW120 16S ribosomal RNA gene, partial sequence Length = 1233 Score = 97.6 bits (49), Expect = 4e-17 Identities = 57/60 (95%) Strand = Plus / Plus Query: 15 aaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaagcaggaatcgct 74 |||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 1170 aaaaaccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagctggaatcgct 1229
>gb|AY846122.1| Uncultured soil bacterium clone G4-24 16S ribosomal RNA gene, partial sequence Length = 427 Score = 97.6 bits (49), Expect = 4e-17 Identities = 57/60 (95%) Strand = Plus / Plus Query: 15 aaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaagcaggaatcgct 74 |||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 312 aaaaaccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagctggaatcgct 371
>gb|AY846027.1| Uncultured soil bacterium clone G11-9 16S ribosomal RNA gene, partial sequence Length = 427 Score = 97.6 bits (49), Expect = 4e-17 Identities = 57/60 (95%) Strand = Plus / Plus Query: 15 aaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaagcaggaatcgct 74 |||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 312 aaaaaccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagctggaatcgct 371
>gb|AY930266.1| Uncultured soil bacterium clone Y6-23 16S ribosomal RNA gene, partial sequence Length = 457 Score = 97.6 bits (49), Expect = 4e-17 Identities = 57/60 (95%) Strand = Plus / Minus Query: 15 aaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaagcaggaatcgct 74 |||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 123 aaaaaccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagctggaatcgct 64
>gb|AY913392.1| Uncultured forest soil bacterium clone DUNssu186 16S ribosomal RNA gene, partial sequence Length = 1427 Score = 97.6 bits (49), Expect = 4e-17 Identities = 57/60 (95%) Strand = Plus / Plus Query: 15 aaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaagcaggaatcgct 74 |||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 1219 aaaaaccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagctggaatcgct 1278
>gb|AY694659.1| Uncultured Acidobacteria bacterium clone JAB SMS 71 16S ribosomal RNA gene, partial sequence Length = 863 Score = 97.6 bits (49), Expect = 4e-17 Identities = 57/60 (95%) Strand = Plus / Minus Query: 15 aaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaagcaggaatcgct 74 |||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 225 aaaaaccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagctggaatcgct 166
>gb|U67743.1|CCU67743 Cynomorium coccineum chloroplast 16S ribosomal RNA gene, partial sequence Length = 1398 Score = 97.6 bits (49), Expect = 4e-17 Identities = 66/72 (91%) Strand = Plus / Plus Query: 3 gagctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaa 62 |||||||| |||||||||| |||||||||||| ||| |||||||||||||||| |||||| Sbjct: 1160 gagctaaccccaaaaacccttcctcagttcggattgaaggctgcaactcgcctacatgaa 1219 Query: 63 gcaggaatcgct 74 | |||||||||| Sbjct: 1220 gtaggaatcgct 1231
>gb|AY948065.1| Uncultured candidate division OP10 bacterium clone PRD18H01 16S ribosomal RNA gene, partial sequence Length = 1427 Score = 95.6 bits (48), Expect = 1e-16 Identities = 59/63 (93%) Strand = Plus / Plus Query: 12 ccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaagcaggaatc 71 ||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1218 ccaaaaatacgtcctcagttcggattgcaggctgcaactcgcctgcatgaagctggaatc 1277 Query: 72 gct 74 ||| Sbjct: 1278 gct 1280
>gb|AY948040.1| Uncultured candidate division OP10 bacterium clone PRD18E09 16S ribosomal RNA gene, partial sequence Length = 1427 Score = 95.6 bits (48), Expect = 1e-16 Identities = 59/63 (93%) Strand = Plus / Plus Query: 12 ccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaagcaggaatc 71 ||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1218 ccaaaaatacgtcctcagttcggattgcaggctgcaactcgcctgcatgaagctggaatc 1277 Query: 72 gct 74 ||| Sbjct: 1278 gct 1280
>gb|AY947992.1| Uncultured bacterium clone PRD18A07 16S ribosomal RNA gene, partial sequence Length = 1427 Score = 95.6 bits (48), Expect = 1e-16 Identities = 59/63 (93%) Strand = Plus / Plus Query: 12 ccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaagcaggaatc 71 ||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1218 ccaaaaatacgtcctcagttcggattgcaggctgcaactcgcctgcatgaagctggaatc 1277 Query: 72 gct 74 ||| Sbjct: 1278 gct 1280
>gb|DQ235029.1| Uncultured bacterium clone ML-7-3 16S ribosomal RNA gene, partial sequence Length = 629 Score = 95.6 bits (48), Expect = 1e-16 Identities = 59/63 (93%) Strand = Plus / Plus Query: 12 ccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaagcaggaatc 71 ||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 405 ccaaaaatacgtcctcagttcggattgcaggctgcaactcgcctgcatgaagctggaatc 464 Query: 72 gct 74 ||| Sbjct: 465 gct 467
>gb|AY592106.1| Uncultured bacterium clone Kazan-1B-29/BC19-1B-29 16S ribosomal RNA gene, partial sequence Length = 1272 Score = 95.6 bits (48), Expect = 1e-16 Identities = 59/63 (93%) Strand = Plus / Plus Query: 12 ccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaagcaggaatc 71 ||||||||||| ||||||||||| |||||||||||||||||||||||||||| |||||| Sbjct: 1209 ccaaaaacccggcctcagttcggattgcaggctgcaactcgcctgcatgaagtcggaatc 1268 Query: 72 gct 74 ||| Sbjct: 1269 gct 1271
>gb|AF316757.1| Uncultured Crater Lake bacterium CL500-48 16S ribosomal RNA gene, partial sequence Length = 1497 Score = 95.6 bits (48), Expect = 1e-16 Identities = 59/63 (93%) Strand = Plus / Plus Query: 12 ccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaagcaggaatc 71 ||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1238 ccaaaaatacgtcctcagttcggattgcaggctgcaactcgcctgcatgaagctggaatc 1297 Query: 72 gct 74 ||| Sbjct: 1298 gct 1300
>gb|AF428681.1| Uncultured bacterium clone CRP99-27 16S ribosomal RNA gene, partial sequence Length = 600 Score = 95.6 bits (48), Expect = 1e-16 Identities = 59/63 (93%) Strand = Plus / Plus Query: 12 ccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaagcaggaatc 71 ||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 391 ccaaaaatacgtcctcagttcggattgcaggctgcaactcgcctgcatgaagctggaatc 450 Query: 72 gct 74 ||| Sbjct: 451 gct 453
>gb|AF428678.1| Uncultured bacterium clone CRP99-24 16S ribosomal RNA gene, partial sequence Length = 600 Score = 95.6 bits (48), Expect = 1e-16 Identities = 59/63 (93%) Strand = Plus / Plus Query: 12 ccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaagcaggaatc 71 |||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 391 ccaaaaacatgtcctcagttcggattgcaggctgcaactcgcctgcatgaagctggaatc 450 Query: 72 gct 74 ||| Sbjct: 451 gct 453
>gb|AY212628.1| Uncultured bacterium clone 177up 16S ribosomal RNA gene, partial sequence Length = 1495 Score = 95.6 bits (48), Expect = 1e-16 Identities = 59/63 (93%) Strand = Plus / Plus Query: 12 ccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaagcaggaatc 71 ||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1239 ccaaaaatacgtcctcagttcggattgcaggctgcaactcgcctgcatgaagctggaatc 1298 Query: 72 gct 74 ||| Sbjct: 1299 gct 1301
>gb|DQ451501.1| Uncultured bacterium clone FAC62 16S ribosomal RNA gene, partial sequence Length = 1452 Score = 95.6 bits (48), Expect = 1e-16 Identities = 59/63 (93%) Strand = Plus / Plus Query: 12 ccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaagcaggaatc 71 ||||||| |||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1228 ccaaaaaaccgttctcagttcggattgcaggctgcaactcgcctgcatgaagctggaatc 1287 Query: 72 gct 74 ||| Sbjct: 1288 gct 1290
>gb|DQ395456.1| Uncultured organism clone ctg_CGOAA58 16S ribosomal RNA gene, partial sequence Length = 1510 Score = 95.6 bits (48), Expect = 1e-16 Identities = 53/55 (96%) Strand = Plus / Plus Query: 20 ccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaagcaggaatcgct 74 ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 1254 ccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatcgct 1308
>gb|AY963462.1| Uncultured bacterium clone BS24 16S ribosomal RNA gene, partial sequence Length = 1421 Score = 95.6 bits (48), Expect = 1e-16 Identities = 59/63 (93%) Strand = Plus / Plus Query: 12 ccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaagcaggaatc 71 ||||||| |||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1213 ccaaaaaaccgttctcagttcggattgcaggctgcaactcgcctgcatgaagctggaatc 1272 Query: 72 gct 74 ||| Sbjct: 1273 gct 1275
>gb|AY963425.1| Uncultured bacterium clone AS62 16S ribosomal RNA gene, partial sequence Length = 1424 Score = 95.6 bits (48), Expect = 1e-16 Identities = 59/63 (93%) Strand = Plus / Plus Query: 12 ccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaagcaggaatc 71 ||||||| |||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1214 ccaaaaaaccgttctcagttcggattgcaggctgcaactcgcctgcatgaagctggaatc 1273 Query: 72 gct 74 ||| Sbjct: 1274 gct 1276
>gb|AY963364.1| Uncultured bacterium clone AH71 16S ribosomal RNA gene, partial sequence Length = 1425 Score = 95.6 bits (48), Expect = 1e-16 Identities = 59/63 (93%) Strand = Plus / Plus Query: 12 ccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaagcaggaatc 71 ||||||| |||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1215 ccaaaaaaccgttctcagttcggattgcaggctgcaactcgcctgcatgaagctggaatc 1274 Query: 72 gct 74 ||| Sbjct: 1275 gct 1277
>gb|AY963349.1| Uncultured bacterium clone AH56 16S ribosomal RNA gene, partial sequence Length = 1423 Score = 95.6 bits (48), Expect = 1e-16 Identities = 59/63 (93%) Strand = Plus / Plus Query: 12 ccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaagcaggaatc 71 ||||||| |||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1213 ccaaaaaaccgttctcagttcggattgcaggctgcaactcgcctgcatgaagctggaatc 1272 Query: 72 gct 74 ||| Sbjct: 1273 gct 1275
>gb|AY963308.1| Uncultured bacterium clone AH12 16S ribosomal RNA gene, partial sequence Length = 1460 Score = 95.6 bits (48), Expect = 1e-16 Identities = 59/63 (93%) Strand = Plus / Plus Query: 12 ccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaagcaggaatc 71 ||||||| |||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1251 ccaaaaaaccgttctcagttcggattgcaggctgcaactcgcctgcatgaagctggaatc 1310 Query: 72 gct 74 ||| Sbjct: 1311 gct 1313
>dbj|AB128880.1| Uncultured bacterium gene for 16S rRNA, clone: 1174-1091-13 Length = 1474 Score = 95.6 bits (48), Expect = 1e-16 Identities = 53/55 (96%) Strand = Plus / Plus Query: 20 ccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaagcaggaatcgct 74 ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 1257 ccgtcctcagttcggattgcaggctgcaactcgcctgcatgaagctggaatcgct 1311
>dbj|AB116454.1| Uncultured planctomycete gene for 16S rRNA, partial sequence, clone: Y112 Length = 1004 Score = 95.6 bits (48), Expect = 1e-16 Identities = 59/63 (93%) Strand = Plus / Plus Query: 12 ccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaagcaggaatc 71 ||||||| | ||||||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 775 ccaaaaagcggtcctcagttcggattgcaggctgcaactcgcctgcatgaagccggaatc 834 Query: 72 gct 74 ||| Sbjct: 835 gct 837
>dbj|AB179518.1| Uncultured bacterium gene for 16S rRNA, partial sequence, clone: MIZ27 Length = 1464 Score = 95.6 bits (48), Expect = 1e-16 Identities = 59/63 (93%) Strand = Plus / Plus Query: 12 ccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaagcaggaatc 71 ||||||| |||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct: 1235 ccaaaaaaccgttctcagttcggattgcaggctgcaactcgcctgcatgaagctggaatc 1294 Query: 72 gct 74 ||| Sbjct: 1295 gct 1297
>gb|AY660566.1| Huperzia lucidula chloroplast, complete genome Length = 154373 Score = 95.6 bits (48), Expect = 1e-16 Identities = 65/71 (91%) Strand = Plus / Minus Query: 4 agctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaag 63 ||||||| |||||||||| ||| ||||||| |||||||||||||||||||||||||||| Sbjct: 150257 agctaacctcaaaaacccggcctaagttcggattgcaggctgcaactcgcctgcatgaag 150198 Query: 64 caggaatcgct 74 | ||||||||| Sbjct: 150197 ccggaatcgct 150187 Score = 95.6 bits (48), Expect = 1e-16 Identities = 65/71 (91%) Strand = Plus / Plus Query: 4 agctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaag 63 ||||||| |||||||||| ||| ||||||| |||||||||||||||||||||||||||| Sbjct: 108205 agctaacctcaaaaacccggcctaagttcggattgcaggctgcaactcgcctgcatgaag 108264 Query: 64 caggaatcgct 74 | ||||||||| Sbjct: 108265 ccggaatcgct 108275
>gb|AF244561.1|AF244561 Phaeoceros laevis 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1487 Score = 95.6 bits (48), Expect = 1e-16 Identities = 65/71 (91%) Strand = Plus / Plus Query: 4 agctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaag 63 ||||||| |||||||||| ||||||||| | |||||||||||||||||||||||||||| Sbjct: 1225 agctaacctcaaaaacccggcctcagttcagattgcaggctgcaactcgcctgcatgaag 1284 Query: 64 caggaatcgct 74 | ||||||||| Sbjct: 1285 ccggaatcgct 1295
>gb|AF244558.1|AF244558 Megaceros aenigmaticus 16S ribosomal RNA gene, partial sequence; chloroplast gene for chloroplast product Length = 1487 Score = 95.6 bits (48), Expect = 1e-16 Identities = 65/71 (91%) Strand = Plus / Plus Query: 4 agctaactccaaaaacccgtcctcagttcggnttgcaggctgcaactcgcctgcatgaag 63 ||||||| |||||||||| ||||||||| | |||||||||||||||||||||||||||| Sbjct: 1225 agctaacctcaaaaacccggcctcagttcagattgcaggctgcaactcgcctgcatgaag 1284 Query: 64 caggaatcgct 74 | ||||||||| Sbjct: 1285 ccggaatcgct 1295 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,910,526 Number of Sequences: 3902068 Number of extensions: 3910526 Number of successful extensions: 107000 Number of sequences better than 10.0: 28605 Number of HSP's better than 10.0 without gapping: 28548 Number of HSP's successfully gapped in prelim test: 68 Number of HSP's that attempted gapping in prelim test: 76956 Number of HSP's gapped (non-prelim): 30048 length of query: 535 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 512 effective length of database: 17,143,297,704 effective search space: 8777368424448 effective search space used: 8777368424448 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)