>DEOC_BDEBA (Q6MGR8) Deoxyribose-phosphate aldolase (EC 4.1.2.4)|
           (Phosphodeoxyriboaldolase) (Deoxyriboaldolase) (DERA)
          Length = 220

 Score = 36.6 bits (83), Expect = 0.049
 Identities = 16/40 (40%), Positives = 25/40 (62%)
 Frame = +2

Query: 137 STGIGGGGERILQLRLLRVACGKSKRRQADGPVHDAEQAE 256
           STG GGGG  +  ++L++   G S   +A G + DA+QA+
Sbjct: 153 STGFGGGGATVDDVKLMKSVVGSSMEVKASGGIKDAQQAK 192

>DEOC_ENTFA (Q839J1) Deoxyribose-phosphate aldolase (EC 4.1.2.4)|
           (Phosphodeoxyriboaldolase) (Deoxyriboaldolase) (DERA)
          Length = 220

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +2

Query: 137 STGIGGGGERILQLRLLRVACGKSKRRQADGPVHDAEQA 253
           STG   GG ++  +RL+R   G     +A G VH+AE+A
Sbjct: 154 STGFSTGGAKVADIRLMRETVGPDMGVKASGGVHNAEEA 192

>GTF1_STRDO (P11001) Glucosyltransferase-I precursor (EC 2.4.1.5) (GTF-I)|
            (Dextransucrase) (Sucrose 6-glucosyltransferase)
          Length = 1597

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 40/158 (25%), Positives = 59/158 (37%), Gaps = 40/158 (25%)
 Frame = +3

Query: 168  YFSSVFSASPAANPRDARQMDLYTMLNKQNPKGQ--SGGG---TADG------------- 293
            YF S  +A   ANP+     D   +L   N +GQ  SG G   TA+              
Sbjct: 1358 YFGSDGTAQTQANPKGQTFKDGSGVLRFYNLEGQYVSGSGWYETAEHEWVYVKSGKVLTG 1417

Query: 294  -----------KSQGSPAKGR-VAYKDGKQFYPNESSESPYFGSSVHYGGRDFY---DSS 428
                       K  G   KG+ V   DGK  Y + +S    F  SV   G+ +Y   D +
Sbjct: 1418 AQTIGNQRVYFKDNGHQVKGQLVTGNDGKLRYYDANSGDQAFNKSVTVNGKTYYFGSDGT 1477

Query: 429  PHKQANESSRNYKED-------NTDGSLATRGDWWQGS 521
               QAN   + +K+        N +G   +   W++ +
Sbjct: 1478 AQTQANPKGQTFKDGSGVLRFYNLEGQYVSGSGWYKNA 1515

>DEOC1_OCEIH (Q8EPW8) Deoxyribose-phosphate aldolase 1 (EC 4.1.2.4)|
           (Phosphodeoxyriboaldolase 1) (Deoxyriboaldolase 1) (DERA
           1)
          Length = 221

 Score = 34.7 bits (78), Expect = 0.19
 Identities = 17/40 (42%), Positives = 21/40 (52%)
 Frame = +2

Query: 137 STGIGGGGERILQLRLLRVACGKSKRRQADGPVHDAEQAE 256
           STG  GGG  +  +RL+R   G     +A G V D EQ E
Sbjct: 154 STGFSGGGATVEDIRLMRETVGPEMGVKASGGVRDLEQTE 193

>DEOC1_BACLD (Q65H59) Deoxyribose-phosphate aldolase 1 (EC 4.1.2.4)|
           (Phosphodeoxyriboaldolase 1) (Deoxyriboaldolase 1) (DERA
           1)
          Length = 223

 Score = 32.3 bits (72), Expect = 0.93
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = +2

Query: 137 STGIGGGGERILQLRLLRVACGKSKRRQADGPVHDAEQA 253
           STG  GGG  +  ++L+R A G     +A G V D E A
Sbjct: 156 STGFSGGGATVRDIKLMREAVGPDIGVKASGGVRDKESA 194

>HNRPG_RAT (P84586) Heterogeneous nuclear ribonucleoprotein G (hnRNP G)|
           (RNA-binding motif protein, X chromosome)
          Length = 388

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 32/112 (28%), Positives = 44/112 (39%), Gaps = 7/112 (6%)
 Frame = +3

Query: 168 YFSSVFSASPAANPRDARQMDLYTMLNKQNPKGQSGGGTADGKSQGS-----PAKGRVAY 332
           Y SS  +   A  PRD    D Y+  + ++     G G  DG  +       P+ G  +Y
Sbjct: 222 YPSSRDTRDYAPPPRDYTYRD-YSHSSSRDDYPSRGYGDRDGYGRDREYSDHPSGG--SY 278

Query: 333 KDGKQFYPNESSESPYFGSSVHYGGRDFYD--SSPHKQANESSRNYKEDNTD 482
           +D  + Y N  S  P  G    YGG   YD  SS       S  +Y    +D
Sbjct: 279 RDSYESYGNSRSAPPTRGPPPSYGGSSRYDDYSSSRDGYGGSRDSYSSSRSD 330

>FA40B_MOUSE (Q8C9H6) Protein FAM40B|
          Length = 844

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +3

Query: 255 NPKGQSGGGTADGKSQGSPAKGRVAYKDGKQFYPNESSES 374
           +P   +G G  +G   G+  KG+ A   G++ + N+  ES
Sbjct: 12  SPANDNGNGNGNGNGNGNGGKGKPAVPKGRETFRNQRRES 51

>KMHB_DICDI (P90648) Myosin heavy chain kinase B (EC 2.7.11.7) (MHCK B)|
          Length = 732

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 20/60 (33%), Positives = 24/60 (40%), Gaps = 3/60 (5%)
 Frame = +3

Query: 207 PRDARQMDLYTMLNKQNPKGQSGGGTADGKSQGSPAKGRVA---YKDGKQFYPNESSESP 377
           P    Q DL   + K  P G  GG TAD K +   A+  +A   YK G   Y       P
Sbjct: 41  PYGTSQTDL--QIGKMLPSGSGGGATADSKFEKFKARNTLADIQYKVGDTLYVRVKKSKP 98

>RPTN_MOUSE (P97347) Repetin|
          Length = 1130

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 27/104 (25%), Positives = 45/104 (43%), Gaps = 2/104 (1%)
 Frame = +3

Query: 159 GNGYFSSVFSASPAANPRDARQMDLYTMLNKQNPKGQSGGGTADGKSQGSPAKGRVAYKD 338
           G GY   VF+ S + NP  A          +Q+  GQSG    D  S  +  +   +Y+ 
Sbjct: 217 GQGY---VFALSQSKNPEQAFHYGQSKTSGQQSSHGQSGRFRKDSYSSQTSQQESDSYEQ 273

Query: 339 -GKQFYPNESSESPYFGSSVHYGGRDFY-DSSPHKQANESSRNY 464
            G Q   + +S++   G +  YG  +    SS H+Q     +++
Sbjct: 274 YGSQHQKSGNSQTERQGQNSQYGQTNKKGHSSYHEQTEGQGQSF 317

>DNAK3_SYNP7 (P50022) Chaperone protein dnaK3 (Heat shock protein 70-3) (Heat|
           shock 70 kDa protein 3) (HSP70-3)
          Length = 749

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
 Frame = +3

Query: 192 SPAANP-RDARQMDLYTMLNKQNPKGQSGGGTADGKSQGSPAKGRVAYKDGKQFYPNESS 368
           SP ++P R  R ++  T ++++ P     GG    + + +P +GR  +++ +    + SS
Sbjct: 666 SPVSDPYRGERWVEEQTSMSRREPVRDRNGGNGSVRPEPAPRRGRPTWEEDQPPRRDRSS 725

Query: 369 ESP 377
           + P
Sbjct: 726 QPP 728

>DNAK1_SYNP6 (Q5N1V0) Chaperone protein dnaK 1 (Heat shock protein 70 1) (Heat|
           shock 70 kDa protein 1) (HSP70 1)
          Length = 749

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
 Frame = +3

Query: 192 SPAANP-RDARQMDLYTMLNKQNPKGQSGGGTADGKSQGSPAKGRVAYKDGKQFYPNESS 368
           SP ++P R  R ++  T ++++ P     GG    + + +P +GR  +++ +    + SS
Sbjct: 666 SPVSDPYRGERWVEEQTSMSRREPVRDRNGGNGSVRPEPAPRRGRPTWEEDQPPRRDRSS 725

Query: 369 ESP 377
           + P
Sbjct: 726 QPP 728

>DEOC_LACLA (Q9CFM7) Deoxyribose-phosphate aldolase (EC 4.1.2.4)|
           (Phosphodeoxyriboaldolase) (Deoxyriboaldolase) (DERA)
          Length = 220

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +2

Query: 137 STGIGGGGERILQLRLLRVACGKSKRRQADGPVHDAEQAE 256
           STG   GG  +  ++L+R   G     +A G VH+ E+A+
Sbjct: 153 STGFSTGGATVHDVKLMRQTVGPDMGVKASGGVHNLEEAK 192

>CO4A1_MOUSE (P02463) Collagen alpha-1(IV) chain precursor|
          Length = 1669

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
 Frame = +3

Query: 207  PRDARQMDLYTMLNKQNPKGQSG--GGTADGKSQGSPAKGRVAYKDGKQFYPNE 362
            P     +D+ +M  ++  +G+ G  G T D  S+G P    V  KDG+  +P +
Sbjct: 935  PGSMEHVDMGSMKGQKGDQGEKGQIGPTGDKGSRGDPGTPGVPGKDGQAGHPGQ 988

>GPR20_HUMAN (Q99678) Probable G-protein coupled receptor 20|
          Length = 358

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 17/40 (42%), Positives = 22/40 (55%)
 Frame = +2

Query: 305 KPC*RSCCLQRWKTILPKRVLRVALFWFVCALRRPGLL*Q 424
           +PC R   L   + +LP  V+ V     +CAL RPGLL Q
Sbjct: 192 RPCCRVFALTVLEFLLPLLVISVFTGRIMCALSRPGLLHQ 231

>HSP71_PICAN (P53421) Heat-shock protein 70 1 (HSP72)|
          Length = 644

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = +3

Query: 396 HYGGRDFYDSSPHKQANESSRNYKEDNTDGSLATR 500
           H GG DF +   +  ANE  R YK+D T    A R
Sbjct: 226 HLGGEDFDNRLVNHFANEFKRKYKKDLTTNQRALR 260

>HNRPG_MOUSE (O35479) Heterogeneous nuclear ribonucleoprotein G (hnRNP G)|
           (RNA-binding motif protein, X chromosome)
          Length = 388

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 28/99 (28%), Positives = 38/99 (38%), Gaps = 7/99 (7%)
 Frame = +3

Query: 207 PRDARQMDLYTMLNKQNPKGQSGGGTADGKSQGS-----PAKGRVAYKDGKQFYPNESSE 371
           PRD    D Y   + ++     G G  DG  +       P+ G  +Y+D  + Y N  S 
Sbjct: 235 PRDYTYRD-YCHSSSRDDYPSRGYGDRDGYGRDRDYSDHPSGG--SYRDSYESYGNSRSA 291

Query: 372 SPYFGSSVHYGGRDFYD--SSPHKQANESSRNYKEDNTD 482
            P  G    YGG   YD  SS       S  +Y    +D
Sbjct: 292 PPTRGPPPSYGGSSRYDDYSSSRDGYGGSRDSYSSSRSD 330

>SEC9_YARLI (Q6C5G0) Protein transport protein SEC9|
          Length = 608

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 29/97 (29%), Positives = 39/97 (40%)
 Frame = +3

Query: 156 AGNGYFSSVFSASPAANPRDARQMDLYTMLNKQNPKGQSGGGTADGKSQGSPAKGRVAYK 335
           A   Y + V   S AA P  A + + Y + N+Q   G      A G + GSP  G   Y 
Sbjct: 42  AYKNYAAQVTQKSSAAPP--AARSNPYAVQNQQPSGGNPYAAAAAGGASGSPYGGSDPYS 99

Query: 336 DGKQFYPNESSESPYFGSSVHYGGRDFYDSSPHKQAN 446
           +G       +S     G S   GG    + SP+K  N
Sbjct: 100 NGGGGNGGSNSN----GGSNSNGGS---NGSPYKMNN 129

>PLXA1_HUMAN (Q9UIW2) Plexin-A1 precursor (Semaphorin receptor NOV)|
          Length = 1896

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 20/63 (31%), Positives = 28/63 (44%)
 Frame = +2

Query: 38   ITTTSRGLSFSPFLFLA*TTTSMEAKKSPPTPASTGIGGGGERILQLRLLRVACGKSKRR 217
            +T  + G  FSP       T  + +      PA  GIGGGG  +L + +  +   K K R
Sbjct: 1219 VTVRAGGFEFSP------GTLQVYSDSLLTLPAIVGIGGGGGLLLLVIVAVLIAYKRKSR 1272

Query: 218  QAD 226
             AD
Sbjct: 1273 DAD 1275

>GPTC2_MOUSE (Q7TQC7) G patch domain-containing protein 2|
          Length = 527

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 22/91 (24%), Positives = 36/91 (39%), Gaps = 2/91 (2%)
 Frame = +3

Query: 249 KQNPKGQSGGGTADGKSQGSPAKGRVAYKDGKQFYPNESSESPYFGSSVHYGGRDFYDSS 428
           +  PK Q  GG  + + +  P K R+ Y++ K      S       SS   G   F +  
Sbjct: 217 RPGPKTQEEGGVLESEERSQPNKDRMEYEEQKASDELRSESDTSSLSSTDAG--LFTNDE 274

Query: 429 PHKQANESSRNYKEDNTDGSLATRG--DWWQ 515
             +  +E S  + E  + G+    G   WW+
Sbjct: 275 GRQGDDEQSDWFYEKESGGACGIAGVVPWWE 305

>GLS2_YEAST (P40989) 1,3-beta-glucan synthase component GLS2 (EC 2.4.1.34)|
           (1,3-beta-D-glucan-UDP glucosyltransferase)
          Length = 1895

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 5/71 (7%)
 Frame = +3

Query: 246 NKQNPKGQSGGGTADGKSQGSPA--KGRVAYKDGKQFYPNE---SSESPYFGSSVHYGGR 410
           N  NP  Q G   +D  S G P+       Y   +  YP++   S  S  +G+ V  G  
Sbjct: 91  NMMNPSSQDGENFSDFSSYGPPSGTYPNDQYTPSQMSYPDQDGSSGASTPYGNGVVNGNG 150

Query: 411 DFYDSSPHKQA 443
            +YD +  + A
Sbjct: 151 QYYDPNAIEMA 161


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,544,063
Number of Sequences: 219361
Number of extensions: 1663064
Number of successful extensions: 5599
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 5322
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5587
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4545742239
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)