ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd23n21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK111749.1| Oryza sativa (japonica cultivar-group) cDNA clon... 335 1e-88
2dbj|AK120171.1| Oryza sativa (japonica cultivar-group) cDNA clon... 327 2e-86
3gb|BT017849.1| Zea mays clone EL01N0510F08.c mRNA sequence 268 2e-68
4gb|BT017956.1| Zea mays clone EL01N0522E07.c mRNA sequence 198 2e-47
5gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome... 194 2e-46
6gb|AC120990.3| Oryza sativa (japonica cultivar-group) chromosome... 194 2e-46
7dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 194 2e-46
8gb|AY111623.1| Zea mays CL25497_-2 mRNA sequence 80 1e-11
9emb|CR962124.2| Medicago truncatula chromosome 5 clone mth2-44c1... 48 0.034
10ref|NM_117181.3| Arabidopsis thaliana SPA2 (SPA1-RELATED 2); ATP... 46 0.13
11emb|AL161531.2|ATCHRIV31 Arabidopsis thaliana DNA chromosome 4, ... 46 0.13
12emb|AL049876.1|ATT22B4 Arabidopsis thaliana DNA chromosome 4, BA... 46 0.13
13gb|AF080120.1|F2P3 Arabidopsis thaliana BAC F2P3 46 0.13
14ref|XM_426628.1| PREDICTED: Gallus gallus similar to constitutiv... 42 2.1
15ref|XM_541504.2| PREDICTED: Canis familiaris similar to potassiu... 42 2.1
16emb|AL356863.12| Human DNA sequence from clone RP11-131P10 on ch... 42 2.1
17gb|AC138674.7| Mus musculus chromosome 7, clone RP23-410I10, com... 42 2.1
18gb|AC010486.5|AC010486 Homo sapiens chromosome 5 clone CTD-2331D... 42 2.1
19gb|AC092956.5| Homo sapiens 3 BAC RP11-648O5 (Roswell Park Cance... 42 2.1
20gb|AC102258.12| Mus musculus chromosome 1, clone RP24-197K20, co... 40 8.3
21gb|AC157923.4| Mus musculus chromosome 1, clone RP23-178F20, com... 40 8.3
22ref|XM_649745.1| Entamoeba histolytica HM-1:IMSS Inosine-uridine... 40 8.3
23gb|AY644518.1| Bos taurus T cell receptor gamma gene, partial se... 40 8.3
24emb|AL136442.12| Human DNA sequence from clone RP11-25J23 on chr... 40 8.3
25gb|AC154626.2| Mus musculus BAC clone RP23-311B8 from chromosome... 40 8.3
26gb|AC007684.3| Homo sapiens BAC clone RP11-449G16 from 2, comple... 40 8.3
27emb|BX571822.6| Zebrafish DNA sequence from clone DKEY-5M24 in l... 40 8.3
28gb|AF445408.1|F445385S23 Homo sapiens MAP4K3 (MAP4K3) gene, exon 28 40 8.3
29emb|BX005420.7| Zebrafish DNA sequence from clone CH211-163I12 i... 40 8.3
30gb|AC005548.1|AC005548 Homo sapiens chromosome 17, clone hRPK.75... 40 8.3 
>dbj|AK111749.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054J06, full
            insert sequence
          Length = 4355

 Score =  335 bits (169), Expect = 1e-88
 Identities = 274/309 (88%)
 Strand = Plus / Plus

                                                                        
Query: 23   tggattgtctactaatgcttgcagtctgacactgagtggtcataccaatgagaagaattt 82
            |||||| |||||| |||| |||||| ||||  ||||||| ||||||||||||||||||||
Sbjct: 3549 tggattatctactgatgcctgcagtatgacgttgagtggccataccaatgagaagaattt 3608

                                                                        
Query: 83   tgtaggcttatctgttcacgatggatacataacatgtggttctgaaaataacgaagtata 142
            ||| || |||||||||||||||||||||||||| ||||||||||||||||| ||||||| 
Sbjct: 3609 tgtggggttatctgttcacgatggatacataacttgtggttctgaaaataatgaagtatt 3668

                                                                        
Query: 143  ttcttactataaaagctttcccatgccaataacttctcacaagtttggttcaattgaccc 202
            |||||| || |||| |||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 3669 ttcttattacaaaacctttcccatgccaataacttctcacaagttcggttcaatcgaccc 3728

                                                                        
Query: 203  aataaccggacaagagacgaacgatgataatcagcagtttgtgtcgagcgtttgctggag 262
            |||||| ||||||||||| || |||||||| || || |||||||| || ||||||||| |
Sbjct: 3729 aataactggacaagagacaaatgatgataaccaacaatttgtgtccagtgtttgctggcg 3788

                                                                        
Query: 263  aggaaggtcgaatatggtggtggctgccaactctagtggaagcatcaaagtccttgagct 322
            ||| |||||||| ||||| ||||||||||| |||| ||| ||||| ||||| ||||||||
Sbjct: 3789 agggaggtcgaacatggtagtggctgccaattctactggcagcattaaagtgcttgagct 3848

                     
Query: 323  tgtttgaat 331
            ||| |||||
Sbjct: 3849 tgtgtgaat 3857
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>dbj|AK120171.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013032J17, full
            insert sequence
          Length = 2682

 Score =  327 bits (165), Expect = 2e-86
 Identities = 273/309 (88%)
 Strand = Plus / Plus

                                                                        
Query: 23   tggattgtctactaatgcttgcagtctgacactgagtggtcataccaatgagaagaattt 82
            |||||| |||||| |||| |||||| ||||  ||||||| ||||||||||||||||||||
Sbjct: 1876 tggattatctactgatgcctgcagtatgacgttgagtggccataccaatgagaagaattt 1935

                                                                        
Query: 83   tgtaggcttatctgttcacgatggatacataacatgtggttctgaaaataacgaagtata 142
            ||| || |||||||||||||||||||||||||| ||||||||||||||||| ||||||| 
Sbjct: 1936 tgtggggttatctgttcacgatggatacataacttgtggttctgaaaataatgaagtatt 1995

                                                                        
Query: 143  ttcttactataaaagctttcccatgccaataacttctcacaagtttggttcaattgaccc 202
            |||||| || |||| |||||||||||||||||||||||||||||| |||||||| |||||
Sbjct: 1996 ttcttattacaaaacctttcccatgccaataacttctcacaagttcggttcaatcgaccc 2055

                                                                        
Query: 203  aataaccggacaagagacgaacgatgataatcagcagtttgtgtcgagcgtttgctggag 262
            |||||| ||||||||||| || |||||||  || || |||||||| || ||||||||| |
Sbjct: 2056 aataactggacaagagacaaatgatgatagccaacaatttgtgtccagtgtttgctggcg 2115

                                                                        
Query: 263  aggaaggtcgaatatggtggtggctgccaactctagtggaagcatcaaagtccttgagct 322
            ||| |||||||| ||||| ||||||||||| |||| ||| ||||| ||||| ||||||||
Sbjct: 2116 agggaggtcgaacatggtagtggctgccaattctactggcagcattaaagtgcttgagct 2175

                     
Query: 323  tgtttgaat 331
            ||| |||||
Sbjct: 2176 tgtgtgaat 2184
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>gb|BT017849.1| Zea mays clone EL01N0510F08.c mRNA sequence
          Length = 1122

 Score =  268 bits (135), Expect = 2e-68
 Identities = 267/311 (85%)
 Strand = Plus / Plus

                                                                       
Query: 23  tggattgtctactaatgcttgcagtctgacactgagtggtcataccaatgagaagaattt 82
           |||||| |||||  || ||||||| ||||| |||| ||||||||||||||||||||||||
Sbjct: 395 tggattatctaccgattcttgcagcctgactctgaatggtcataccaatgagaagaattt 454

                                                                       
Query: 83  tgtaggcttatctgttcacgatggatacataacatgtggttctgaaaataacgaagtata 142
           ||||||  |||||||||| |||||||||||||| ||||| |||||||  || ||||| | 
Sbjct: 455 tgtagggctatctgttcatgatggatacataacttgtggctctgaaaccaatgaagtgtt 514

                                                                       
Query: 143 ttcttactataaaagctttcccatgccaataacttctcacaagtttggttcaattgaccc 202
           ||||||||| ||||  || |||||||||||||||||||| | ||||||||| ||||||||
Sbjct: 515 ttcttactacaaaactttccccatgccaataacttctcataggtttggttctattgaccc 574

                                                                       
Query: 203 aataaccggacaagagacgaacgatgataatcagcagtttgtgtcgagcgtttgctggag 262
            ||||| ||||||| ||| || || || || ||||| |||||||| || |||||||||||
Sbjct: 575 gataactggacaagtgacaaatgaagacaaccagcaatttgtgtccagtgtttgctggag 634

                                                                       
Query: 263 aggaaggtcgaatatggtggtggctgccaactctagtggaagcatcaaagtccttgagct 322
           ||| | ||| || ||||| |||||||||||||| ||||| ||||||||||| ||||||||
Sbjct: 635 agggaagtcaaacatggtagtggctgccaactccagtggtagcatcaaagtgcttgagct 694

                      
Query: 323 tgtttgaatga 333
           ||| |||||||
Sbjct: 695 tgtgtgaatga 705
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>gb|BT017956.1| Zea mays clone EL01N0522E07.c mRNA sequence
          Length = 1029

 Score =  198 bits (100), Expect = 2e-47
 Identities = 199/232 (85%)
 Strand = Plus / Plus

                                                                       
Query: 104 tggatacataacatgtggttctgaaaataacgaagtatattcttactataaaagctttcc 163
           |||||||||||| ||||| |||||||  || ||||| | ||||||||| |||   || ||
Sbjct: 11  tggatacataacttgtggctctgaaaccaatgaagtcttttcttactacaaagatttccc 70

                                                                       
Query: 164 catgccaataacttctcacaagtttggttcaattgacccaataaccggacaagagacgaa 223
           |||||||||||||||||| | ||||||||| |||||||| ||||| ||||||| ||| ||
Sbjct: 71  catgccaataacttctcataggtttggttccattgacccgataactggacaagtgacaaa 130

                                                                       
Query: 224 cgatgataatcagcagtttgtgtcgagcgtttgctggagaggaaggtcgaatatggtggt 283
            || || || ||||||||||||||||| |||||||||||||| | ||| || ||||| ||
Sbjct: 131 tgaagacaaccagcagtttgtgtcgagtgtttgctggagagggaagtcaaacatggtagt 190

                                                               
Query: 284 ggctgccaactctagtggaagcatcaaagtccttgagcttgtttgaatgatc 335
           |||||||||||| ||||| ||||||||||| ||||||||||| |||||||||
Sbjct: 191 ggctgccaactccagtggcagcatcaaagtgcttgagcttgtgtgaatgatc 242
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>gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1735_C10,
            complete sequence
          Length = 187034

 Score =  194 bits (98), Expect = 2e-46
 Identities = 170/194 (87%)
 Strand = Plus / Minus

                                                                        
Query: 138  gtatattcttactataaaagctttcccatgccaataacttctcacaagtttggttcaatt 197
            |||| |||||| || |||| |||||||||||||||||||||||||||||| |||||||| 
Sbjct: 9829 gtattttcttattacaaaacctttcccatgccaataacttctcacaagttcggttcaatc 9770

                                                                        
Query: 198  gacccaataaccggacaagagacgaacgatgataatcagcagtttgtgtcgagcgtttgc 257
            ||||||||||| ||||||||||| || |||||||| || || |||||||| || ||||||
Sbjct: 9769 gacccaataactggacaagagacaaatgatgataaccaacaatttgtgtccagtgtttgc 9710

                                                                        
Query: 258  tggagaggaaggtcgaatatggtggtggctgccaactctagtggaagcatcaaagtcctt 317
            ||| |||| |||||||| ||||| ||||||||||| |||| ||| ||||| ||||| |||
Sbjct: 9709 tggcgagggaggtcgaacatggtagtggctgccaattctactggcagcattaaagtgctt 9650

                          
Query: 318  gagcttgtttgaat 331
            |||||||| |||||
Sbjct: 9649 gagcttgtgtgaat 9636



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 60/64 (93%)
 Strand = Plus / Minus

                                                                         
Query: 76    agaattttgtaggcttatctgttcacgatggatacataacatgtggttctgaaaataacg 135
             |||||||||| || |||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 10312 agaattttgtggggttatctgttcacgatggatacataacttgtggttctgaaaataatg 10253

                 
Query: 136   aagt 139
             ||||
Sbjct: 10252 aagt 10249



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                    
Query: 23    tggattgtctactaatgcttgcagtctgacactgagtggtcataccaatgagaag 77
             |||||| |||||| |||| |||||| ||||  ||||||| |||||||||||||||
Sbjct: 10446 tggattatctactgatgcctgcagtatgacgttgagtggccataccaatgagaag 10392
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>gb|AC120990.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0040E06,
              complete sequence
          Length = 160907

 Score =  194 bits (98), Expect = 2e-46
 Identities = 170/194 (87%)
 Strand = Plus / Minus

                                                                          
Query: 138    gtatattcttactataaaagctttcccatgccaataacttctcacaagtttggttcaatt 197
              |||| |||||| || |||| |||||||||||||||||||||||||||||| |||||||| 
Sbjct: 158262 gtattttcttattacaaaacctttcccatgccaataacttctcacaagttcggttcaatc 158203

                                                                          
Query: 198    gacccaataaccggacaagagacgaacgatgataatcagcagtttgtgtcgagcgtttgc 257
              ||||||||||| ||||||||||| || |||||||| || || |||||||| || ||||||
Sbjct: 158202 gacccaataactggacaagagacaaatgatgataaccaacaatttgtgtccagtgtttgc 158143

                                                                          
Query: 258    tggagaggaaggtcgaatatggtggtggctgccaactctagtggaagcatcaaagtcctt 317
              ||| |||| |||||||| ||||| ||||||||||| |||| ||| ||||| ||||| |||
Sbjct: 158142 tggcgagggaggtcgaacatggtagtggctgccaattctactggcagcattaaagtgctt 158083

                            
Query: 318    gagcttgtttgaat 331
              |||||||| |||||
Sbjct: 158082 gagcttgtgtgaat 158069



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 60/64 (93%)
 Strand = Plus / Minus

                                                                          
Query: 76     agaattttgtaggcttatctgttcacgatggatacataacatgtggttctgaaaataacg 135
              |||||||||| || |||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 158745 agaattttgtggggttatctgttcacgatggatacataacttgtggttctgaaaataatg 158686

                  
Query: 136    aagt 139
              ||||
Sbjct: 158685 aagt 158682



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                     
Query: 23     tggattgtctactaatgcttgcagtctgacactgagtggtcataccaatgagaag 77
              |||||| |||||| |||| |||||| ||||  ||||||| |||||||||||||||
Sbjct: 158879 tggattatctactgatgcctgcagtatgacgttgagtggccataccaatgagaag 158825
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  194 bits (98), Expect = 2e-46
 Identities = 170/194 (87%)
 Strand = Plus / Minus

                                                                            
Query: 138      gtatattcttactataaaagctttcccatgccaataacttctcacaagtttggttcaatt 197
                |||| |||||| || |||| |||||||||||||||||||||||||||||| |||||||| 
Sbjct: 28225587 gtattttcttattacaaaacctttcccatgccaataacttctcacaagttcggttcaatc 28225528

                                                                            
Query: 198      gacccaataaccggacaagagacgaacgatgataatcagcagtttgtgtcgagcgtttgc 257
                ||||||||||| ||||||||||| || |||||||| || || |||||||| || ||||||
Sbjct: 28225527 gacccaataactggacaagagacaaatgatgataaccaacaatttgtgtccagtgtttgc 28225468

                                                                            
Query: 258      tggagaggaaggtcgaatatggtggtggctgccaactctagtggaagcatcaaagtcctt 317
                ||| |||| |||||||| ||||| ||||||||||| |||| ||| ||||| ||||| |||
Sbjct: 28225467 tggcgagggaggtcgaacatggtagtggctgccaattctactggcagcattaaagtgctt 28225408

                              
Query: 318      gagcttgtttgaat 331
                |||||||| |||||
Sbjct: 28225407 gagcttgtgtgaat 28225394



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 60/64 (93%)
 Strand = Plus / Minus

                                                                            
Query: 76       agaattttgtaggcttatctgttcacgatggatacataacatgtggttctgaaaataacg 135
                |||||||||| || |||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 28226070 agaattttgtggggttatctgttcacgatggatacataacttgtggttctgaaaataatg 28226011

                    
Query: 136      aagt 139
                ||||
Sbjct: 28226010 aagt 28226007



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                       
Query: 23       tggattgtctactaatgcttgcagtctgacactgagtggtcataccaatgagaag 77
                |||||| |||||| |||| |||||| ||||  ||||||| |||||||||||||||
Sbjct: 28226204 tggattatctactgatgcctgcagtatgacgttgagtggccataccaatgagaag 28226150
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>gb|AY111623.1| Zea mays CL25497_-2 mRNA sequence
          Length = 485

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 70/80 (87%)
 Strand = Plus / Plus

                                                                       
Query: 254 ttgctggagaggaaggtcgaatatggtggtggctgccaactctagtggaagcatcaaagt 313
           |||||||||||| | ||| || ||||  |||||||||||||| ||||| |||||||||||
Sbjct: 25  ttgctggagagggaagtcaaacatgggagtggctgccaactccagtggtagcatcaaagt 84

                               
Query: 314 ccttgagcttgtttgaatga 333
            ||||||||||| |||||||
Sbjct: 85  gcttgagcttgtgtgaatga 104
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>emb|CR962124.2| Medicago truncatula chromosome 5 clone mth2-44c15, COMPLETE SEQUENCE
          Length = 136068

 Score = 48.1 bits (24), Expect = 0.034
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                      
Query: 160    ttcccatgccaataacttctcacaagtttggttcaattga 199
              ||||||||||||| ||||| ||||||||||| || |||||
Sbjct: 130970 ttcccatgccaattacttcacacaagtttggatctattga 130931
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>ref|NM_117181.3| Arabidopsis thaliana SPA2 (SPA1-RELATED 2); ATP binding / protein
            kinase/ signal transducer AT4G11110 (SPA2) mRNA, complete
            cds
          Length = 3797

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                           
Query: 160  ttcccatgccaataacttctcacaagtttggttcaattgacccaata 206
            ||||||||||||| || ||  ||||||||||||| ||||| ||||||
Sbjct: 3078 ttcccatgccaattacctcgtacaagtttggttctattgatccaata 3124



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 249  agcgtttgctggagaggaaggtcgaatatggt 280
            |||||||||||||||  ||| |||||||||||
Sbjct: 3167 agcgtttgctggagaaaaagatcgaatatggt 3198
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>emb|AL161531.2|ATCHRIV31 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 31
          Length = 198301

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                            
Query: 160   ttcccatgccaataacttctcacaagtttggttcaattgacccaata 206
             ||||||||||||| || ||  ||||||||||||| ||||| ||||||
Sbjct: 20743 ttcccatgccaattacctcgtacaagtttggttctattgatccaata 20789



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 249   agcgtttgctggagaggaaggtcgaatatggt 280
             |||||||||||||||  ||| |||||||||||
Sbjct: 20832 agcgtttgctggagaaaaagatcgaatatggt 20863
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>emb|AL049876.1|ATT22B4 Arabidopsis thaliana DNA chromosome 4, BAC clone T22B4 (ESSA project)
          Length = 108598

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                            
Query: 160   ttcccatgccaataacttctcacaagtttggttcaattgacccaata 206
             ||||||||||||| || ||  ||||||||||||| ||||| ||||||
Sbjct: 48276 ttcccatgccaattacctcgtacaagtttggttctattgatccaata 48322



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 249   agcgtttgctggagaggaaggtcgaatatggt 280
             |||||||||||||||  ||| |||||||||||
Sbjct: 48365 agcgtttgctggagaaaaagatcgaatatggt 48396
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>gb|AF080120.1|F2P3 Arabidopsis thaliana BAC F2P3
          Length = 74406

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                            
Query: 160   ttcccatgccaataacttctcacaagtttggttcaattgacccaata 206
             ||||||||||||| || ||  ||||||||||||| ||||| ||||||
Sbjct: 45078 ttcccatgccaattacctcgtacaagtttggttctattgatccaata 45032



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 249   agcgtttgctggagaggaaggtcgaatatggt 280
             |||||||||||||||  ||| |||||||||||
Sbjct: 44989 agcgtttgctggagaaaaagatcgaatatggt 44958
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>ref|XM_426628.1| PREDICTED: Gallus gallus similar to constitutive photomorphogenic
            protein (LOC429072), mRNA
          Length = 2166

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 68   caatgagaagaattttgtagg 88
            |||||||||||||||||||||
Sbjct: 1920 caatgagaagaattttgtagg 1940
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>ref|XM_541504.2| PREDICTED: Canis familiaris similar to potassium voltage-gated
            channel, shaker-related subfamily, member 7 (LOC484389),
            mRNA
          Length = 1435

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 388  cttcggtgaccatatgtttcc 408
            |||||||||||||||||||||
Sbjct: 1397 cttcggtgaccatatgtttcc 1377
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>emb|AL356863.12| Human DNA sequence from clone RP11-131P10 on chromosome 13 Contains a
             novel gene (BM-002), complete sequence
          Length = 122752

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 150   tataaaagctttcccatgcca 170
             |||||||||||||||||||||
Sbjct: 96961 tataaaagctttcccatgcca 96941
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>gb|AC138674.7| Mus musculus chromosome 7, clone RP23-410I10, complete sequence
          Length = 173504

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 136   aagtatattcttactataaaa 156
             |||||||||||||||||||||
Sbjct: 41346 aagtatattcttactataaaa 41366
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>gb|AC010486.5|AC010486 Homo sapiens chromosome 5 clone CTD-2331D11, complete sequence
          Length = 105234

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 150   tataaaagctttcccatgcca 170
             |||||||||||||||||||||
Sbjct: 34937 tataaaagctttcccatgcca 34917
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>gb|AC092956.5| Homo sapiens 3 BAC RP11-648O5 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 194510

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 150    tataaaagctttcccatgcca 170
              |||||||||||||||||||||
Sbjct: 113683 tataaaagctttcccatgcca 113663
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>gb|AC102258.12| Mus musculus chromosome 1, clone RP24-197K20, complete sequence
          Length = 166838

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 160    ttcccatgccaataacttct 179
              ||||||||||||||||||||
Sbjct: 103480 ttcccatgccaataacttct 103461
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>gb|AC157923.4| Mus musculus chromosome 1, clone RP23-178F20, complete sequence
          Length = 204025

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 160   ttcccatgccaataacttct 179
             ||||||||||||||||||||
Sbjct: 98611 ttcccatgccaataacttct 98592
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>ref|XM_649745.1| Entamoeba histolytica HM-1:IMSS Inosine-uridine preferring
           nucleoside hydrolase (42.t00042) partial mRNA
          Length = 957

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 181 acaagtttggttcaattgac 200
           ||||||||||||||||||||
Sbjct: 421 acaagtttggttcaattgac 402
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>gb|AY644518.1| Bos taurus T cell receptor gamma gene, partial sequence
          Length = 188109

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 572   caactggagggagtgaaatg 591
             ||||||||||||||||||||
Sbjct: 77756 caactggagggagtgaaatg 77737
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>emb|AL136442.12| Human DNA sequence from clone RP11-25J23 on chromosome 13 Contains the
             3' end of a novel gene (KIAA1165) (likely ortholog of
             mouse Nedd4 WW domain-binding protein 5A) and a novel
             gene, complete sequence
          Length = 157695

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 154   aaagctttcccatgccaata 173
             ||||||||||||||||||||
Sbjct: 37373 aaagctttcccatgccaata 37354
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>gb|AC154626.2| Mus musculus BAC clone RP23-311B8 from chromosome 14, complete sequence
          Length = 194638

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 103    atggatacataacatgtggt 122
              ||||||||||||||||||||
Sbjct: 128043 atggatacataacatgtggt 128062
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>gb|AC007684.3| Homo sapiens BAC clone RP11-449G16 from 2, complete sequence
          Length = 196848

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 141    tattcttactataaaagctt 160
              ||||||||||||||||||||
Sbjct: 193647 tattcttactataaaagctt 193666
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>emb|BX571822.6| Zebrafish DNA sequence from clone DKEY-5M24 in linkage group 25, complete
              sequence
          Length = 163788

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 112    taacatgtggttctgaaaat 131
              ||||||||||||||||||||
Sbjct: 162140 taacatgtggttctgaaaat 162121
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>gb|AF445408.1|F445385S23 Homo sapiens MAP4K3 (MAP4K3) gene, exon 28
          Length = 744

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 141 tattcttactataaaagctt 160
           ||||||||||||||||||||
Sbjct: 518 tattcttactataaaagctt 537
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>emb|BX005420.7| Zebrafish DNA sequence from clone CH211-163I12 in linkage group 25,
           complete sequence
          Length = 142324

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 112 taacatgtggttctgaaaat 131
           ||||||||||||||||||||
Sbjct: 352 taacatgtggttctgaaaat 333
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>gb|AC005548.1|AC005548 Homo sapiens chromosome 17, clone hRPK.756_K_11, complete sequence
          Length = 156811

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 302    aagcatcaaagtccttgagc 321
              ||||||||||||||||||||
Sbjct: 131054 aagcatcaaagtccttgagc 131073


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,803,037
Number of Sequences: 3902068
Number of extensions: 4803037
Number of successful extensions: 82690
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 82599
Number of HSP's gapped (non-prelim): 91
length of query: 610
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 587
effective length of database: 17,143,297,704
effective search space: 10063115752248
effective search space used: 10063115752248
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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