| Clone Name | basd24c03 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 944 bits (476), Expect = 0.0 Identities = 512/525 (97%) Strand = Plus / Minus Query: 1 tacaaaggnaaattaactctgtaaaccagngntttaatatttctatcgaaaaagttaaag 60 |||||| | |||||||||||||||||||| | |||||||||||||||||||||||||||| Sbjct: 79474 tacaaaaggaaattaactctgtaaaccagagatttaatatttctatcgaaaaagttaaag 79415 Query: 61 aaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatagag 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79414 aaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatagag 79355 Query: 121 tttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggg 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79354 tttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggg 79295 Query: 181 gagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatcca 240 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 79294 gagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgcgccgaatcca 79235 Query: 241 ttaaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgctatc 300 |||||| ||| |||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 79234 ttaaaaagggtagacttcccctccaaacaattcgcgctaaaattgattattgctgctatc 79175 Query: 301 caattcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaagaat 360 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79174 caattcggactatctatggagtattaggtgtaaaaatttggatattcgtagacgaagaat 79115 Query: 361 aactaatcttgtcttcgaattctgtccattgatagaataaaaaatgacaagagacttttt 420 || |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| Sbjct: 79114 aagtaatcttgtcttcggattctgtccattgatagaatcaaaaatgacaagagacttttt 79055 Query: 421 tcctgaaatccctgcaaaagaagaaattctacctctttctataagatttaatgaaaattg 480 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 79054 tcctgaaatccctgcaaaagaagaaattatacctctttctataagatttaatgaaaattg 78995 Query: 481 ataaatcatttaatataattgctatgcttagtgtgtgactcgtta 525 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78994 ataaatcatttaatataattgctatgcttagtgtgtgactcgtta 78950 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Minus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 78923 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 78874
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 676 bits (341), Expect = 0.0 Identities = 474/517 (91%), Gaps = 4/517 (0%) Strand = Plus / Minus Query: 13 ttaactctgtaaaccagngntttaatatttctatcgaaaaagttaaagaaccttatagac 72 |||| |||||||||||| | |||||||| ||||||||||| |||||||||||||||| Sbjct: 79649 ttaattctgtaaaccagagacttaatattgggatcgaaaaagtgaaagaaccttatagac 79590 Query: 73 agcctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaa 132 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79589 aacctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaa 79530 Query: 133 aggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaa 192 ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| Sbjct: 79529 aggcaatgaaaaaagccattgaattaactaaaaaaacagatataaagggagtaaaagtaa 79470 Query: 193 aaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggca 252 ||||||| || ||||||| |||||||||||||| |||||||||| ||| |||| || | Sbjct: 79469 aaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaaggta 79410 Query: 253 gacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaacta 312 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 79409 gacttcccctccaaacaattcgcgctaaaattgattattgctgctatccaattcgaacta 79350 Query: 313 tctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttgt 372 |||||||||||||||| || ||||||||||||||||||||||||||||||| || | ||| Sbjct: 79349 tctatggagtattaggagttaaaatttggatattcgtagacgaagaataaccaaccctgt 79290 Query: 373 cttcgaattctgtccattgatagaataaaaaatgacaagagact--tttttcctgaaatc 430 |||| ||||||| || | |||||||||||||||||||||| || |||| ||| ||||| Sbjct: 79289 cttcccattctgttcagtaatagaataaaaaatgacaagagccttattttccctaaaatc 79230 Query: 431 cctg--caaaagaagaaattctacctctttctataagatttaatgaaaattgataaatca 488 |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 79229 cctgaaaaaaagaagaaattctacctctttctataagatttaatgaaaattgagaaatct 79170 Query: 489 tttaatataattgctatgcttagtgtgtgactcgtta 525 ||||||| ||||||||||||||||||||||||||||| Sbjct: 79169 tttaataaaattgctatgcttagtgtgtgactcgtta 79133 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||||||||||| Sbjct: 79059 actaataaccaacctattgcttcgtattg 79031
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 676 bits (341), Expect = 0.0 Identities = 474/517 (91%), Gaps = 4/517 (0%) Strand = Plus / Minus Query: 13 ttaactctgtaaaccagngntttaatatttctatcgaaaaagttaaagaaccttatagac 72 |||| |||||||||||| | |||||||| ||||||||||| |||||||||||||||| Sbjct: 55712 ttaattctgtaaaccagagacttaatattgggatcgaaaaagtgaaagaaccttatagac 55653 Query: 73 agcctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaa 132 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 55652 aacctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaa 55593 Query: 133 aggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaa 192 ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| Sbjct: 55592 aggcaatgaaaaaagccattgaattaactaaaaaaacagatataaagggagtaaaagtaa 55533 Query: 193 aaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggca 252 ||||||| || ||||||| |||||||||||||| |||||||||| ||| |||| || | Sbjct: 55532 aaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaaggta 55473 Query: 253 gacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaacta 312 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 55472 gacttcccctccaaacaattcgcgctaaaattgattattgctgctatccaattcgaacta 55413 Query: 313 tctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttgt 372 |||||||||||||||| || ||||||||||||||||||||||||||||||| || | ||| Sbjct: 55412 tctatggagtattaggagttaaaatttggatattcgtagacgaagaataaccaaccctgt 55353 Query: 373 cttcgaattctgtccattgatagaataaaaaatgacaagagact--tttttcctgaaatc 430 |||| ||||||| || | |||||||||||||||||||||| || |||| ||| ||||| Sbjct: 55352 cttcccattctgttcagtaatagaataaaaaatgacaagagccttattttccctaaaatc 55293 Query: 431 cctg--caaaagaagaaattctacctctttctataagatttaatgaaaattgataaatca 488 |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 55292 cctgaaaaaaagaagaaattctacctctttctataagatttaatgaaaattgagaaatct 55233 Query: 489 tttaatataattgctatgcttagtgtgtgactcgtta 525 ||||||| ||||||||||||||||||||||||||||| Sbjct: 55232 tttaataaaattgctatgcttagtgtgtgactcgtta 55196 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||||||||||| Sbjct: 55122 actaataaccaacctattgcttcgtattg 55094
>gb|AC134345.2| Oryza sativa (jpaonica cultivar-group) chromosome 5 PAC clone P0012A07, complete sequence Length = 136858 Score = 676 bits (341), Expect = 0.0 Identities = 474/517 (91%), Gaps = 4/517 (0%) Strand = Plus / Minus Query: 13 ttaactctgtaaaccagngntttaatatttctatcgaaaaagttaaagaaccttatagac 72 |||| |||||||||||| | |||||||| ||||||||||| |||||||||||||||| Sbjct: 128540 ttaattctgtaaaccagagacttaatattgggatcgaaaaagtgaaagaaccttatagac 128481 Query: 73 agcctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaa 132 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128480 aacctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaa 128421 Query: 133 aggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaa 192 ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| Sbjct: 128420 aggcaatgaaaaaagccattgaattaactaaaaaaacagatataaagggagtaaaagtaa 128361 Query: 193 aaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggca 252 ||||||| || ||||||| |||||||||||||| |||||||||| ||| |||| || | Sbjct: 128360 aaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaaggta 128301 Query: 253 gacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaacta 312 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 128300 gacttcccctccaaacaattcgcgctaaaattgattattgctgctatccaattcgaacta 128241 Query: 313 tctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttgt 372 |||||||||||||||| || ||||||||||||||||||||||||||||||| || | ||| Sbjct: 128240 tctatggagtattaggagttaaaatttggatattcgtagacgaagaataaccaaccctgt 128181 Query: 373 cttcgaattctgtccattgatagaataaaaaatgacaagagact--tttttcctgaaatc 430 |||| ||||||| || | |||||||||||||||||||||| || |||| ||| ||||| Sbjct: 128180 cttcccattctgttcagtaatagaataaaaaatgacaagagccttattttccctaaaatc 128121 Query: 431 cctg--caaaagaagaaattctacctctttctataagatttaatgaaaattgataaatca 488 |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 128120 cctgaaaaaaagaagaaattctacctctttctataagatttaatgaaaattgagaaatct 128061 Query: 489 tttaatataattgctatgcttagtgtgtgactcgtta 525 ||||||| ||||||||||||||||||||||||||||| Sbjct: 128060 tttaataaaattgctatgcttagtgtgtgactcgtta 128024 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||||||||||| Sbjct: 127950 actaataaccaacctattgcttcgtattg 127922
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 676 bits (341), Expect = 0.0 Identities = 474/517 (91%), Gaps = 4/517 (0%) Strand = Plus / Plus Query: 13 ttaactctgtaaaccagngntttaatatttctatcgaaaaagttaaagaaccttatagac 72 |||| |||||||||||| | |||||||| ||||||||||| |||||||||||||||| Sbjct: 71048 ttaattctgtaaaccagagacttaatattgggatcgaaaaagtgaaagaaccttatagac 71107 Query: 73 agcctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaa 132 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 71108 aacctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaa 71167 Query: 133 aggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaa 192 ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| Sbjct: 71168 aggcaatgaaaaaagccattgaattaactaaaaaaacagatataaagggagtaaaagtaa 71227 Query: 193 aaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggca 252 ||||||| || ||||||| |||||||||||||| |||||||||| ||| |||| || | Sbjct: 71228 aaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaaggta 71287 Query: 253 gacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaacta 312 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 71288 gacttcccctccaaacaattcgcgctaaaattgattattgctgctatccaattcgaacta 71347 Query: 313 tctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttgt 372 |||||||||||||||| || ||||||||||||||||||||||||||||||| || | ||| Sbjct: 71348 tctatggagtattaggagttaaaatttggatattcgtagacgaagaataaccaaccctgt 71407 Query: 373 cttcgaattctgtccattgatagaataaaaaatgacaagagact--tttttcctgaaatc 430 |||| ||||||| || | |||||||||||||||||||||| || |||| ||| ||||| Sbjct: 71408 cttcccattctgttcagtaatagaataaaaaatgacaagagccttattttccctaaaatc 71467 Query: 431 cctg--caaaagaagaaattctacctctttctataagatttaatgaaaattgataaatca 488 |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 71468 cctgaaaaaaagaagaaattctacctctttctataagatttaatgaaaattgagaaatct 71527 Query: 489 tttaatataattgctatgcttagtgtgtgactcgtta 525 ||||||| ||||||||||||||||||||||||||||| Sbjct: 71528 tttaataaaattgctatgcttagtgtgtgactcgtta 71564 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||||||||||| Sbjct: 71638 actaataaccaacctattgcttcgtattg 71666 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||||||||||| Sbjct: 5730 actaataaccaacctattgcttcgtattg 5702
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 676 bits (341), Expect = 0.0 Identities = 474/517 (91%), Gaps = 4/517 (0%) Strand = Plus / Plus Query: 13 ttaactctgtaaaccagngntttaatatttctatcgaaaaagttaaagaaccttatagac 72 |||| |||||||||||| | |||||||| ||||||||||| |||||||||||||||| Sbjct: 9189975 ttaattctgtaaaccagagacttaatattgggatcgaaaaagtgaaagaaccttatagac 9190034 Query: 73 agcctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaa 132 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9190035 aacctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaa 9190094 Query: 133 aggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaa 192 ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| Sbjct: 9190095 aggcaatgaaaaaagccattgaattaactaaaaaaacagatataaagggagtaaaagtaa 9190154 Query: 193 aaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggca 252 ||||||| || ||||||| |||||||||||||| |||||||||| ||| |||| || | Sbjct: 9190155 aaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaaggta 9190214 Query: 253 gacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaacta 312 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 9190215 gacttcccctccaaacaattcgcgctaaaattgattattgctgctatccaattcgaacta 9190274 Query: 313 tctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttgt 372 |||||||||||||||| || ||||||||||||||||||||||||||||||| || | ||| Sbjct: 9190275 tctatggagtattaggagttaaaatttggatattcgtagacgaagaataaccaaccctgt 9190334 Query: 373 cttcgaattctgtccattgatagaataaaaaatgacaagagact--tttttcctgaaatc 430 |||| ||||||| || | |||||||||||||||||||||| || |||| ||| ||||| Sbjct: 9190335 cttcccattctgttcagtaatagaataaaaaatgacaagagccttattttccctaaaatc 9190394 Query: 431 cctg--caaaagaagaaattctacctctttctataagatttaatgaaaattgataaatca 488 |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 9190395 cctgaaaaaaagaagaaattctacctctttctataagatttaatgaaaattgagaaatct 9190454 Query: 489 tttaatataattgctatgcttagtgtgtgactcgtta 525 ||||||| ||||||||||||||||||||||||||||| Sbjct: 9190455 tttaataaaattgctatgcttagtgtgtgactcgtta 9190491 Score = 676 bits (341), Expect = 0.0 Identities = 474/517 (91%), Gaps = 4/517 (0%) Strand = Plus / Plus Query: 13 ttaactctgtaaaccagngntttaatatttctatcgaaaaagttaaagaaccttatagac 72 |||| |||||||||||| | |||||||| ||||||||||| |||||||||||||||| Sbjct: 9113022 ttaattctgtaaaccagagacttaatattgggatcgaaaaagtgaaagaaccttatagac 9113081 Query: 73 agcctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaa 132 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9113082 aacctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaa 9113141 Query: 133 aggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaa 192 ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| Sbjct: 9113142 aggcaatgaaaaaagccattgaattaactaaaaaaacagatataaagggagtaaaagtaa 9113201 Query: 193 aaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggca 252 ||||||| || ||||||| |||||||||||||| |||||||||| ||| |||| || | Sbjct: 9113202 aaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaaggta 9113261 Query: 253 gacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaacta 312 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 9113262 gacttcccctccaaacaattcgcgctaaaattgattattgctgctatccaattcgaacta 9113321 Query: 313 tctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttgt 372 |||||||||||||||| || ||||||||||||||||||||||||||||||| || | ||| Sbjct: 9113322 tctatggagtattaggagttaaaatttggatattcgtagacgaagaataaccaaccctgt 9113381 Query: 373 cttcgaattctgtccattgatagaataaaaaatgacaagagact--tttttcctgaaatc 430 |||| ||||||| || | |||||||||||||||||||||| || |||| ||| ||||| Sbjct: 9113382 cttcccattctgttcagtaatagaataaaaaatgacaagagccttattttccctaaaatc 9113441 Query: 431 cctg--caaaagaagaaattctacctctttctataagatttaatgaaaattgataaatca 488 |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 9113442 cctgaaaaaaagaagaaattctacctctttctataagatttaatgaaaattgagaaatct 9113501 Query: 489 tttaatataattgctatgcttagtgtgtgactcgtta 525 ||||||| ||||||||||||||||||||||||||||| Sbjct: 9113502 tttaataaaattgctatgcttagtgtgtgactcgtta 9113538 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||||||||||| Sbjct: 9190565 actaataaccaacctattgcttcgtattg 9190593 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||||||||||| Sbjct: 9113612 actaataaccaacctattgcttcgtattg 9113640 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||||||||||| Sbjct: 9047804 actaataaccaacctattgcttcgtattg 9047776
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 676 bits (341), Expect = 0.0 Identities = 474/517 (91%), Gaps = 4/517 (0%) Strand = Plus / Minus Query: 13 ttaactctgtaaaccagngntttaatatttctatcgaaaaagttaaagaaccttatagac 72 |||| |||||||||||| | |||||||| ||||||||||| |||||||||||||||| Sbjct: 12758253 ttaattctgtaaaccagagacttaatattgggatcgaaaaagtgaaagaaccttatagac 12758194 Query: 73 agcctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaa 132 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12758193 aacctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaa 12758134 Query: 133 aggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaa 192 ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| Sbjct: 12758133 aggcaatgaaaaaagccattgaattaactaaaaaaacagatataaagggagtaaaagtaa 12758074 Query: 193 aaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggca 252 ||||||| || ||||||| |||||||||||||| |||||||||| ||| |||| || | Sbjct: 12758073 aaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaaggta 12758014 Query: 253 gacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaacta 312 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 12758013 gacttcccctccaaacaattcgcgctaaaattgattattgctgctatccaattcgaacta 12757954 Query: 313 tctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttgt 372 |||||||||||||||| || ||||||||||||||||||||||||||||||| || | ||| Sbjct: 12757953 tctatggagtattaggagttaaaatttggatattcgtagacgaagaataaccaaccctgt 12757894 Query: 373 cttcgaattctgtccattgatagaataaaaaatgacaagagact--tttttcctgaaatc 430 |||| ||||||| || | |||||||||||||||||||||| || |||| ||| ||||| Sbjct: 12757893 cttcccattctgttcagtaatagaataaaaaatgacaagagccttattttccctaaaatc 12757834 Query: 431 cctg--caaaagaagaaattctacctctttctataagatttaatgaaaattgataaatca 488 |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 12757833 cctgaaaaaaagaagaaattctacctctttctataagatttaatgaaaattgagaaatct 12757774 Query: 489 tttaatataattgctatgcttagtgtgtgactcgtta 525 ||||||| ||||||||||||||||||||||||||||| Sbjct: 12757773 tttaataaaattgctatgcttagtgtgtgactcgtta 12757737 Score = 418 bits (211), Expect = e-114 Identities = 341/381 (89%), Gaps = 5/381 (1%) Strand = Plus / Plus Query: 149 cattgaattaactaaaaaagcagatataaggggagtaaaagtaaaaattgcgggtcgtct 208 ||||||||||||||||||| || |||||| ||||||||||||||||||||| || ||||| Sbjct: 19543473 cattgaattaactaaaaaa-catatataaagggagtaaaagtaaaaattgcaggccgtct 19543531 Query: 209 cggaggaaaagaaattgcacgtgccgaatccattaaaaggggcagacttcccctccaaac 268 || |||||||||||||| |||||||||| ||| |||| || ||||||||||||||||| Sbjct: 19543532 cgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaaggtagacttcccctccaaac 19543591 Query: 269 aatccgcgctaaaattgattattgctgctatccaattcgaactatctatggagtattagg 328 ||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19543592 aattcgatctaaaattgattattgctgctatccaattcgaactatctatggagtattagg 19543651 Query: 329 tgtaaaaatttggatattcgtagacgaagaataactaatcttgtcttcgaattctgtcca 388 || |||||||||||||||||||| |||||||||| || | ||||||| ||||||| | Sbjct: 19543652 agttaaaatttggatattcgtagatgaagaataaccaaccctgtcttcccattctgttaa 19543711 Query: 389 ttgatagaataaaaaatgacaagagact--tttttcctgaaatccctg--caaaagaaga 444 | |||||||||||||||||||||| || |||| ||| ||||||||| ||||||||| Sbjct: 19543712 gtaatagaataaaaaatgacaagagccttattttccctaaaatccctgaaaaaaagaaga 19543771 Query: 445 aattctacctctttctataagatttaatgaaaattgataaatcatttaatataattgcta 504 ||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 19543772 aattctacctctttctataagatttaatgaaaattgagaaatcttttaataaaattgcta 19543831 Query: 505 tgcttagtgtgtgactcgtta 525 || |||||||||||||||||| Sbjct: 19543832 tgtttagtgtgtgactcgtta 19543852 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||||||||||| Sbjct: 19543923 actaataaccaacctattgcttcgtattg 19543951 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||||||||||| Sbjct: 12757663 actaataaccaacctattgcttcgtattg 12757635
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 676 bits (341), Expect = 0.0 Identities = 474/517 (91%), Gaps = 4/517 (0%) Strand = Plus / Minus Query: 13 ttaactctgtaaaccagngntttaatatttctatcgaaaaagttaaagaaccttatagac 72 |||| |||||||||||| | |||||||| ||||||||||| |||||||||||||||| Sbjct: 79646 ttaattctgtaaaccagagacttaatattgggatcgaaaaagtgaaagaaccttatagac 79587 Query: 73 agcctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaa 132 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79586 aacctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaa 79527 Query: 133 aggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaa 192 ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| Sbjct: 79526 aggcaatgaaaaaagccattgaattaactaaaaaaacagatataaagggagtaaaagtaa 79467 Query: 193 aaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggca 252 ||||||| || ||||||| |||||||||||||| |||||||||| ||| |||| || | Sbjct: 79466 aaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaaggta 79407 Query: 253 gacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaacta 312 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 79406 gacttcccctccaaacaattcgcgctaaaattgattattgctgctatccaattcgaacta 79347 Query: 313 tctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttgt 372 |||||||||||||||| || ||||||||||||||||||||||||||||||| || | ||| Sbjct: 79346 tctatggagtattaggagttaaaatttggatattcgtagacgaagaataaccaaccctgt 79287 Query: 373 cttcgaattctgtccattgatagaataaaaaatgacaagagact--tttttcctgaaatc 430 |||| ||||||| || | |||||||||||||||||||||| || |||| ||| ||||| Sbjct: 79286 cttcccattctgttcagtaatagaataaaaaatgacaagagccttattttccctaaaatc 79227 Query: 431 cctg--caaaagaagaaattctacctctttctataagatttaatgaaaattgataaatca 488 |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 79226 cctgaaaaaaagaagaaattctacctctttctataagatttaatgaaaattgagaaatct 79167 Query: 489 tttaatataattgctatgcttagtgtgtgactcgtta 525 ||||||| ||||||||||||||||||||||||||||| Sbjct: 79166 tttaataaaattgctatgcttagtgtgtgactcgtta 79130 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||||||||||| Sbjct: 79056 actaataaccaacctattgcttcgtattg 79028
>ref|XM_481016.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2472 Score = 668 bits (337), Expect = 0.0 Identities = 473/517 (91%), Gaps = 4/517 (0%) Strand = Plus / Plus Query: 13 ttaactctgtaaaccagngntttaatatttctatcgaaaaagttaaagaaccttatagac 72 |||| |||||||||||| | |||||||| ||||||||||| |||||||||||||||| Sbjct: 1210 ttaattctgtaaaccagagacttaatattgggatcgaaaaagtgaaagaaccttatagac 1269 Query: 73 agcctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaa 132 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1270 aacctaacattcttgtagaatatatagctttccaattaaaaaatagagtttcattccgaa 1329 Query: 133 aggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaa 192 ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| Sbjct: 1330 aggcaatgaaaaaagccattgaattaactaaaaaaacagatataaagggagtaaaagtaa 1389 Query: 193 aaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggca 252 ||||||| || ||||||| |||||||||||||| |||||||||| ||| |||| || | Sbjct: 1390 aaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaaggta 1449 Query: 253 gacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaacta 312 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1450 gacttcccctccaaacaattcgcgctaaaattgattattgctgctatccaattcgaacta 1509 Query: 313 tctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttgt 372 |||||||||||||||| || ||||||||||||||||||||||||||||||| || | ||| Sbjct: 1510 tctatggagtattaggagttaaaatttggatattcgtagacgaagaataaccaaccctgt 1569 Query: 373 cttcgaattctgtccattgatagaataaaaaatgacaagagact--tttttcctgaaatc 430 |||| ||||||| || | |||||||||||||||||||||| || |||| ||| ||||| Sbjct: 1570 cttcccattctgttcagtaatagaataaaaaatgacaagagccttattttccctaaaatc 1629 Query: 431 cctg--caaaagaagaaattctacctctttctataagatttaatgaaaattgataaatca 488 |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1630 cctgaaaaaaagaagaaattctacctctttctataagatttaatgaaaattgagaaatct 1689 Query: 489 tttaatataattgctatgcttagtgtgtgactcgtta 525 ||||||| ||||||||||||||||||||||||||||| Sbjct: 1690 tttaataaaattgctatgcttagtgtgtgactcgtta 1726 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||||||||||| Sbjct: 1799 actaataaccaacctattgcttcgtattg 1827
>ref|XM_481017.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2472 Score = 668 bits (337), Expect = 0.0 Identities = 473/517 (91%), Gaps = 4/517 (0%) Strand = Plus / Plus Query: 13 ttaactctgtaaaccagngntttaatatttctatcgaaaaagttaaagaaccttatagac 72 |||| |||||||||||| | |||||||| ||||||||||| |||||||||||||||| Sbjct: 1210 ttaattctgtaaaccagagacttaatattgggatcgaaaaagtgaaagaaccttatagac 1269 Query: 73 agcctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaa 132 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1270 aacctaacattcttgtagaatatatagctttccaattaaaaaatagagtttcattccgaa 1329 Query: 133 aggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaa 192 ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| Sbjct: 1330 aggcaatgaaaaaagccattgaattaactaaaaaaacagatataaagggagtaaaagtaa 1389 Query: 193 aaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggca 252 ||||||| || ||||||| |||||||||||||| |||||||||| ||| |||| || | Sbjct: 1390 aaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaaggta 1449 Query: 253 gacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaacta 312 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1450 gacttcccctccaaacaattcgcgctaaaattgattattgctgctatccaattcgaacta 1509 Query: 313 tctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttgt 372 |||||||||||||||| || ||||||||||||||||||||||||||||||| || | ||| Sbjct: 1510 tctatggagtattaggagttaaaatttggatattcgtagacgaagaataaccaaccctgt 1569 Query: 373 cttcgaattctgtccattgatagaataaaaaatgacaagagact--tttttcctgaaatc 430 |||| ||||||| || | |||||||||||||||||||||| || |||| ||| ||||| Sbjct: 1570 cttcccattctgttcagtaatagaataaaaaatgacaagagccttattttccctaaaatc 1629 Query: 431 cctg--caaaagaagaaattctacctctttctataagatttaatgaaaattgataaatca 488 |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1630 cctgaaaaaaagaagaaattctacctctttctataagatttaatgaaaattgagaaatct 1689 Query: 489 tttaatataattgctatgcttagtgtgtgactcgtta 525 ||||||| ||||||||||||||||||||||||||||| Sbjct: 1690 tttaataaaattgctatgcttagtgtgtgactcgtta 1726 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||||||||||| Sbjct: 1799 actaataaccaacctattgcttcgtattg 1827
>ref|XM_479425.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2380 Score = 668 bits (337), Expect = 0.0 Identities = 473/517 (91%), Gaps = 4/517 (0%) Strand = Plus / Plus Query: 13 ttaactctgtaaaccagngntttaatatttctatcgaaaaagttaaagaaccttatagac 72 |||| |||||||||||| | |||||||| ||||||||||| |||||||||||||||| Sbjct: 1118 ttaattctgtaaaccagagacttaatattgggatcgaaaaagtgaaagaaccttatagac 1177 Query: 73 agcctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaa 132 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1178 aacctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaa 1237 Query: 133 aggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaa 192 ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| Sbjct: 1238 aggcaatgaaaaaagccattgaattaactaaaaaaacagatataaagggagtaaaagtaa 1297 Query: 193 aaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggca 252 ||||||| || |||||| |||||||||||||| |||||||||| ||| |||| || | Sbjct: 1298 aaattgcaggctgtctcgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaaggta 1357 Query: 253 gacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaacta 312 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1358 gacttcccctccaaacaattcgcgctaaaattgattattgctgctatccaattcgaacta 1417 Query: 313 tctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttgt 372 |||||||||||||||| || ||||||||||||||||||||||||||||||| || | ||| Sbjct: 1418 tctatggagtattaggagttaaaatttggatattcgtagacgaagaataaccaaccctgt 1477 Query: 373 cttcgaattctgtccattgatagaataaaaaatgacaagagact--tttttcctgaaatc 430 |||| ||||||| || | |||||||||||||||||||||| || |||| ||| ||||| Sbjct: 1478 cttcccattctgttcagtaatagaataaaaaatgacaagagccttattttccctaaaatc 1537 Query: 431 cctg--caaaagaagaaattctacctctttctataagatttaatgaaaattgataaatca 488 |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1538 cctgaaaaaaagaagaaattctacctctttctataagatttaatgaaaattgagaaatct 1597 Query: 489 tttaatataattgctatgcttagtgtgtgactcgtta 525 ||||||| ||||||||||||||||||||||||||||| Sbjct: 1598 tttaataaaattgctatgcttagtgtgtgactcgtta 1634 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||||||||||| Sbjct: 1707 actaataaccaacctattgcttcgtattg 1735
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 668 bits (337), Expect = 0.0 Identities = 473/517 (91%), Gaps = 4/517 (0%) Strand = Plus / Minus Query: 13 ttaactctgtaaaccagngntttaatatttctatcgaaaaagttaaagaaccttatagac 72 |||| |||||||||||| | |||||||| ||||||||||| |||||||||||||||| Sbjct: 79706 ttaattctgtaaaccagagacttaatattgggatcgaaaaagtgaaagaaccttatagac 79647 Query: 73 agcctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaa 132 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79646 aacctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaa 79587 Query: 133 aggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaa 192 ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| Sbjct: 79586 aggcaatgaaaaaagccattgaattaactaaaaaaacagatataaagggagtaaaagtaa 79527 Query: 193 aaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggca 252 ||||||| || ||||||| |||||||||||||| |||||||| | ||| |||| || | Sbjct: 79526 aaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgagtgcatcaaaaaaggta 79467 Query: 253 gacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaacta 312 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 79466 gacttcccctccaaacaattcgcgctaaaattgattattgctgctatccaattcgaacta 79407 Query: 313 tctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttgt 372 |||||||||||||||| || ||||||||||||||||||||||||||||||| || | ||| Sbjct: 79406 tctatggagtattaggagttaaaatttggatattcgtagacgaagaataaccaaccctgt 79347 Query: 373 cttcgaattctgtccattgatagaataaaaaatgacaagagact--tttttcctgaaatc 430 |||| ||||||| || | |||||||||||||||||||||| || |||| ||| ||||| Sbjct: 79346 cttcccattctgttcagtaatagaataaaaaatgacaagagccttattttccctaaaatc 79287 Query: 431 cctg--caaaagaagaaattctacctctttctataagatttaatgaaaattgataaatca 488 |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 79286 cctgaaaaaaagaagaaattctacctctttctataagatttaatgaaaattgagaaatct 79227 Query: 489 tttaatataattgctatgcttagtgtgtgactcgtta 525 ||||||| ||||||||||||||||||||||||||||| Sbjct: 79226 tttaataaaattgctatgcttagtgtgtgactcgtta 79190 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||||||||||| Sbjct: 79116 actaataaccaacctattgcttcgtattg 79088
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 668 bits (337), Expect = 0.0 Identities = 473/517 (91%), Gaps = 4/517 (0%) Strand = Plus / Minus Query: 13 ttaactctgtaaaccagngntttaatatttctatcgaaaaagttaaagaaccttatagac 72 |||| |||||||||||| | |||||||| ||||||||||| |||||||||||||||| Sbjct: 79706 ttaattctgtaaaccagagacttaatattgggatcgaaaaagtgaaagaaccttatagac 79647 Query: 73 agcctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaa 132 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79646 aacctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaa 79587 Query: 133 aggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaa 192 ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| Sbjct: 79586 aggcaatgaaaaaagccattgaattaactaaaaaaacagatataaagggagtaaaagtaa 79527 Query: 193 aaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggca 252 ||||||| || ||||||| |||||||||||||| |||||||| | ||| |||| || | Sbjct: 79526 aaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgagtgcatcaaaaaaggta 79467 Query: 253 gacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaacta 312 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 79466 gacttcccctccaaacaattcgcgctaaaattgattattgctgctatccaattcgaacta 79407 Query: 313 tctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttgt 372 |||||||||||||||| || ||||||||||||||||||||||||||||||| || | ||| Sbjct: 79406 tctatggagtattaggagttaaaatttggatattcgtagacgaagaataaccaaccctgt 79347 Query: 373 cttcgaattctgtccattgatagaataaaaaatgacaagagact--tttttcctgaaatc 430 |||| ||||||| || | |||||||||||||||||||||| || |||| ||| ||||| Sbjct: 79346 cttcccattctgttcagtaatagaataaaaaatgacaagagccttattttccctaaaatc 79287 Query: 431 cctg--caaaagaagaaattctacctctttctataagatttaatgaaaattgataaatca 488 |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 79286 cctgaaaaaaagaagaaattctacctctttctataagatttaatgaaaattgagaaatct 79227 Query: 489 tttaatataattgctatgcttagtgtgtgactcgtta 525 ||||||| ||||||||||||||||||||||||||||| Sbjct: 79226 tttaataaaattgctatgcttagtgtgtgactcgtta 79190 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||||||||||| Sbjct: 79116 actaataaccaacctattgcttcgtattg 79088
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 668 bits (337), Expect = 0.0 Identities = 473/517 (91%), Gaps = 4/517 (0%) Strand = Plus / Minus Query: 13 ttaactctgtaaaccagngntttaatatttctatcgaaaaagttaaagaaccttatagac 72 |||| |||||||||||| | |||||||| ||||||||||| |||||||||||||||| Sbjct: 79693 ttaattctgtaaaccagagacttaatattgggatcgaaaaagtgaaagaaccttatagac 79634 Query: 73 agcctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaa 132 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 79633 aacctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaa 79574 Query: 133 aggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaa 192 ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| Sbjct: 79573 aggcaatgaaaaaagccattgaattaactaaaaaaacagatataaagggagtaaaagtaa 79514 Query: 193 aaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggca 252 ||||||| || ||||||| |||||||||||||| |||||||| | ||| |||| || | Sbjct: 79513 aaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgagtgcatcaaaaaaggta 79454 Query: 253 gacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaacta 312 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 79453 gacttcccctccaaacaattcgcgctaaaattgattattgctgctatccaattcgaacta 79394 Query: 313 tctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttgt 372 |||||||||||||||| || ||||||||||||||||||||||||||||||| || | ||| Sbjct: 79393 tctatggagtattaggagttaaaatttggatattcgtagacgaagaataaccaaccctgt 79334 Query: 373 cttcgaattctgtccattgatagaataaaaaatgacaagagact--tttttcctgaaatc 430 |||| ||||||| || | |||||||||||||||||||||| || |||| ||| ||||| Sbjct: 79333 cttcccattctgttcagtaatagaataaaaaatgacaagagccttattttccctaaaatc 79274 Query: 431 cctg--caaaagaagaaattctacctctttctataagatttaatgaaaattgataaatca 488 |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 79273 cctgaaaaaaagaagaaattctacctctttctataagatttaatgaaaattgagaaatct 79214 Query: 489 tttaatataattgctatgcttagtgtgtgactcgtta 525 ||||||| ||||||||||||||||||||||||||||| Sbjct: 79213 tttaataaaattgctatgcttagtgtgtgactcgtta 79177 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||||||||||| Sbjct: 79103 actaataaccaacctattgcttcgtattg 79075
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 668 bits (337), Expect = 0.0 Identities = 473/517 (91%), Gaps = 4/517 (0%) Strand = Plus / Minus Query: 13 ttaactctgtaaaccagngntttaatatttctatcgaaaaagttaaagaaccttatagac 72 |||| |||||||||||| | |||||||| ||||||||||| |||||||||||||||| Sbjct: 77886 ttaattctgtaaaccagagacttaatattgggatcgaaaaagtgaaagaaccttatagac 77827 Query: 73 agcctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaa 132 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77826 aacctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaa 77767 Query: 133 aggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaa 192 ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| Sbjct: 77766 aggcaatgaaaaaagccattgaattaactaaaaaaacagatataaagggagtaaaagtaa 77707 Query: 193 aaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggca 252 ||||||| || ||||||| |||||||||||||| |||||||||| ||| |||| || | Sbjct: 77706 aaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaaggta 77647 Query: 253 gacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaacta 312 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 77646 gacttcccctccaaacaattcgcgctaaaattgattattgctgctatccaattcgaacta 77587 Query: 313 tctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttgt 372 |||||||||||||||| || ||||||||||||||||||||| ||||||||| || | ||| Sbjct: 77586 tctatggagtattaggagttaaaatttggatattcgtagacaaagaataaccaaccctgt 77527 Query: 373 cttcgaattctgtccattgatagaataaaaaatgacaagagact--tttttcctgaaatc 430 |||| ||||||| || | |||||||||||||||||||||| || |||| ||| ||||| Sbjct: 77526 cttcccattctgttcagtaatagaataaaaaatgacaagagccttattttccctaaaatc 77467 Query: 431 cctg--caaaagaagaaattctacctctttctataagatttaatgaaaattgataaatca 488 |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 77466 cctgaaaaaaagaagaaattctacctctttctataagatttaatgaaaattgagaaatct 77407 Query: 489 tttaatataattgctatgcttagtgtgtgactcgtta 525 ||||||| ||||||||||||||||||||||||||||| Sbjct: 77406 tttaataaaattgctatgcttagtgtgtgactcgtta 77370 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||||||||||| Sbjct: 77297 actaataaccaacctattgcttcgtattg 77269
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 668 bits (337), Expect = 0.0 Identities = 473/517 (91%), Gaps = 4/517 (0%) Strand = Plus / Minus Query: 13 ttaactctgtaaaccagngntttaatatttctatcgaaaaagttaaagaaccttatagac 72 |||| |||||||||||| | |||||||| ||||||||||| |||||||||||||||| Sbjct: 11950 ttaattctgtaaaccagagacttaatattgggatcgaaaaagtgaaagaaccttatagac 11891 Query: 73 agcctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaa 132 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11890 aacctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaa 11831 Query: 133 aggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaa 192 ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| Sbjct: 11830 aggcaatgaaaaaagccattgaattaactaaaaaaacagatataaagggagtaaaagtaa 11771 Query: 193 aaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggca 252 ||||||| || ||||||| |||||||||||||| |||||||||| ||| |||| || | Sbjct: 11770 aaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaaggta 11711 Query: 253 gacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaacta 312 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 11710 gacttcccctccaaacaattcgcgctaaaattgattattgctgctatccaattcgaacta 11651 Query: 313 tctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttgt 372 |||||||||||||||| || ||||||||||||||||||||| ||||||||| || | ||| Sbjct: 11650 tctatggagtattaggagttaaaatttggatattcgtagacaaagaataaccaaccctgt 11591 Query: 373 cttcgaattctgtccattgatagaataaaaaatgacaagagact--tttttcctgaaatc 430 |||| ||||||| || | |||||||||||||||||||||| || |||| ||| ||||| Sbjct: 11590 cttcccattctgttcagtaatagaataaaaaatgacaagagccttattttccctaaaatc 11531 Query: 431 cctg--caaaagaagaaattctacctctttctataagatttaatgaaaattgataaatca 488 |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 11530 cctgaaaaaaagaagaaattctacctctttctataagatttaatgaaaattgagaaatct 11471 Query: 489 tttaatataattgctatgcttagtgtgtgactcgtta 525 ||||||| ||||||||||||||||||||||||||||| Sbjct: 11470 tttaataaaattgctatgcttagtgtgtgactcgtta 11434 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||||||||||| Sbjct: 11361 actaataaccaacctattgcttcgtattg 11333
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 668 bits (337), Expect = 0.0 Identities = 473/517 (91%), Gaps = 4/517 (0%) Strand = Plus / Minus Query: 13 ttaactctgtaaaccagngntttaatatttctatcgaaaaagttaaagaaccttatagac 72 |||| |||||||||||| | |||||||| ||||||||||| |||||||||||||||| Sbjct: 10371494 ttaattctgtaaaccagagacttaatattgggatcgaaaaagtgaaagaaccttatagac 10371435 Query: 73 agcctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaa 132 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10371434 aacctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaa 10371375 Query: 133 aggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaa 192 ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| Sbjct: 10371374 aggcaatgaaaaaagccattgaattaactaaaaaaacagatataaagggagtaaaagtaa 10371315 Query: 193 aaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggca 252 ||||||| || ||||||| |||||||||||||| |||||||||| ||| |||| || | Sbjct: 10371314 aaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaaggta 10371255 Query: 253 gacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaacta 312 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 10371254 gacttcccctccaaacaattcgcgctaaaattgattattgctgctatccaattcgaacta 10371195 Query: 313 tctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttgt 372 |||||||||||||||| || ||||||||||||||||||||| ||||||||| || | ||| Sbjct: 10371194 tctatggagtattaggagttaaaatttggatattcgtagacaaagaataaccaaccctgt 10371135 Query: 373 cttcgaattctgtccattgatagaataaaaaatgacaagagact--tttttcctgaaatc 430 |||| ||||||| || | |||||||||||||||||||||| || |||| ||| ||||| Sbjct: 10371134 cttcccattctgttcagtaatagaataaaaaatgacaagagccttattttccctaaaatc 10371075 Query: 431 cctg--caaaagaagaaattctacctctttctataagatttaatgaaaattgataaatca 488 |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 10371074 cctgaaaaaaagaagaaattctacctctttctataagatttaatgaaaattgagaaatct 10371015 Query: 489 tttaatataattgctatgcttagtgtgtgactcgtta 525 ||||||| ||||||||||||||||||||||||||||| Sbjct: 10371014 tttaataaaattgctatgcttagtgtgtgactcgtta 10370978 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||||||||||| Sbjct: 10370905 actaataaccaacctattgcttcgtattg 10370877
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 668 bits (337), Expect = 0.0 Identities = 473/517 (91%), Gaps = 4/517 (0%) Strand = Plus / Plus Query: 13 ttaactctgtaaaccagngntttaatatttctatcgaaaaagttaaagaaccttatagac 72 |||| |||||||||||| | |||||||| ||||||||||| |||||||||||||||| Sbjct: 14453993 ttaattctgtaaaccagagacttaatattgggatcgaaaaagtgaaagaaccttatagac 14454052 Query: 73 agcctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaa 132 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14454053 aacctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaa 14454112 Query: 133 aggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaa 192 ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| Sbjct: 14454113 aggcaatgaaaaaagccattgaattaactaaaaaaacagatataaagggagtaaaagtaa 14454172 Query: 193 aaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggca 252 ||||||| || ||||||| |||||||||||||| |||||||||| ||| |||| || | Sbjct: 14454173 aaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaaggta 14454232 Query: 253 gacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaacta 312 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 14454233 gacttcccctccaaacaattcgcgctaaaattgattattgctgctatccaattcgaacta 14454292 Query: 313 tctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttgt 372 |||||||||||||||| || ||||||||||||||||||||||||||||||| || | ||| Sbjct: 14454293 tctatggagtattaggagttaaaatttggatattcgtagacgaagaataaccaaccctgt 14454352 Query: 373 cttcgaattctgtccattgatagaataaaaaatgacaagagact--tttttcctgaaatc 430 |||| ||||||| || | | |||||||||||||||||||| || |||| ||| ||||| Sbjct: 14454353 cttcccattctgttcagtaagagaataaaaaatgacaagagccttattttccctaaaatc 14454412 Query: 431 cctg--caaaagaagaaattctacctctttctataagatttaatgaaaattgataaatca 488 |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 14454413 cctgaaaaaaagaagaaattctacctctttctataagatttaatgaaaattgagaaatct 14454472 Query: 489 tttaatataattgctatgcttagtgtgtgactcgtta 525 ||||||| ||||||||||||||||||||||||||||| Sbjct: 14454473 tttaataaaattgctatgcttagtgtgtgactcgtta 14454509 Score = 638 bits (322), Expect = e-180 Identities = 471/518 (90%), Gaps = 5/518 (0%) Strand = Plus / Plus Query: 13 ttaactctgtaaaccagngntttaatatttctatcgaaaaagttaaagaaccttatagac 72 |||| |||||||||||| | |||||||| ||||||||||| |||||||||||||||| Sbjct: 11894200 ttaattctgtaaaccagagacttaatattgggatcgaaaaagtgaaagaaccttatagac 11894259 Query: 73 agcctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaa 132 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 11894260 aacctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccaaa 11894319 Query: 133 aggcaatgaaaaaagccattgaattaactaaaaaag-cagatataaggggagtaaaagta 191 ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 11894320 aggcaatgaaaaaagccattgaattaactaaaaaaaacagatataaagggagtaaaagta 11894379 Query: 192 aaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggc 251 |||||||| || ||||||| |||||||||||||| |||||||||| ||| |||| | Sbjct: 11894380 aaaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaagat 11894439 Query: 252 agacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaact 311 |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 11894440 agacttcccctccaaacaattcacgctaaaattgattattgctgctatccaattcgaact 11894499 Query: 312 atctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttg 371 ||||||||||||||||| || ||||||||||||||||||||||||||||||| || | || Sbjct: 11894500 atctatggagtattaggagttaaaatttggatattcgtagacgaagaataaccaaccctg 11894559 Query: 372 tcttcgaattctgtccattgatagaataaaaaatgacaagagact--tttttcctgaaat 429 ||||| ||||||| || | ||||||||||||||||||||| ||| |||| ||| |||| Sbjct: 11894560 tcttcccattctgttcagtaatagaataaaaaatgacaagatacttattttccctaaaat 11894619 Query: 430 ccctg--caaaagaagaaattctacctctttctataagatttaatgaaaattgataaatc 487 ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 11894620 ccctgaaaaaaagaagaaattctacctctttctataagatttaatgaaaattgagaaatc 11894679 Query: 488 atttaatataattgctatgcttagtgtgtgactcgtta 525 ||||||| ||||||||||||||||||||||||||||| Sbjct: 11894680 ttttaataaaattgctatgcttagtgtgtgactcgtta 11894717 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||||||||||| Sbjct: 14454583 actaataaccaacctattgcttcgtattg 14454611 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||||||||||| Sbjct: 11894788 actaataaccaacctattgcttcgtattg 11894816
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 668 bits (337), Expect = 0.0 Identities = 473/517 (91%), Gaps = 4/517 (0%) Strand = Plus / Plus Query: 13 ttaactctgtaaaccagngntttaatatttctatcgaaaaagttaaagaaccttatagac 72 |||| |||||||||||| | |||||||| ||||||||||| |||||||||||||||| Sbjct: 9257365 ttaattctgtaaaccagagacttaatattgggatcgaaaaagtgaaagaaccttatagac 9257424 Query: 73 agcctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaa 132 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9257425 aacctaacattcttgtagaatatatagctttccaattaaaaaatagagtttcattccgaa 9257484 Query: 133 aggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaa 192 ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| Sbjct: 9257485 aggcaatgaaaaaagccattgaattaactaaaaaaacagatataaagggagtaaaagtaa 9257544 Query: 193 aaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggca 252 ||||||| || ||||||| |||||||||||||| |||||||||| ||| |||| || | Sbjct: 9257545 aaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaaggta 9257604 Query: 253 gacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaacta 312 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 9257605 gacttcccctccaaacaattcgcgctaaaattgattattgctgctatccaattcgaacta 9257664 Query: 313 tctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttgt 372 |||||||||||||||| || ||||||||||||||||||||||||||||||| || | ||| Sbjct: 9257665 tctatggagtattaggagttaaaatttggatattcgtagacgaagaataaccaaccctgt 9257724 Query: 373 cttcgaattctgtccattgatagaataaaaaatgacaagagact--tttttcctgaaatc 430 |||| ||||||| || | |||||||||||||||||||||| || |||| ||| ||||| Sbjct: 9257725 cttcccattctgttcagtaatagaataaaaaatgacaagagccttattttccctaaaatc 9257784 Query: 431 cctg--caaaagaagaaattctacctctttctataagatttaatgaaaattgataaatca 488 |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 9257785 cctgaaaaaaagaagaaattctacctctttctataagatttaatgaaaattgagaaatct 9257844 Query: 489 tttaatataattgctatgcttagtgtgtgactcgtta 525 ||||||| ||||||||||||||||||||||||||||| Sbjct: 9257845 tttaataaaattgctatgcttagtgtgtgactcgtta 9257881 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||||||||||| Sbjct: 9257954 actaataaccaacctattgcttcgtattg 9257982 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 431 cctgcaaaagaagaaattct 450 |||||||||||||||||||| Sbjct: 25650014 cctgcaaaagaagaaattct 25650033
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 668 bits (337), Expect = 0.0 Identities = 473/517 (91%), Gaps = 4/517 (0%) Strand = Plus / Minus Query: 13 ttaactctgtaaaccagngntttaatatttctatcgaaaaagttaaagaaccttatagac 72 |||| |||||||||||| | |||||||| ||||||||||| |||||||||||||||| Sbjct: 27925178 ttaattctgtaaaccagagacttaatattgggatcgaaaaagtgaaagaaccttatagac 27925119 Query: 73 agcctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaa 132 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 27925118 aacctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaa 27925059 Query: 133 aggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaa 192 ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| Sbjct: 27925058 aggcaatgaaaaaagccattgaattaactaaaaaaacagatataaagggagtaaaagtaa 27924999 Query: 193 aaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggca 252 ||||||| || |||||| |||||||||||||| |||||||||| ||| |||| || | Sbjct: 27924998 aaattgcaggctgtctcgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaaggta 27924939 Query: 253 gacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaacta 312 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 27924938 gacttcccctccaaacaattcgcgctaaaattgattattgctgctatccaattcgaacta 27924879 Query: 313 tctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttgt 372 |||||||||||||||| || ||||||||||||||||||||||||||||||| || | ||| Sbjct: 27924878 tctatggagtattaggagttaaaatttggatattcgtagacgaagaataaccaaccctgt 27924819 Query: 373 cttcgaattctgtccattgatagaataaaaaatgacaagagact--tttttcctgaaatc 430 |||| ||||||| || | |||||||||||||||||||||| || |||| ||| ||||| Sbjct: 27924818 cttcccattctgttcagtaatagaataaaaaatgacaagagccttattttccctaaaatc 27924759 Query: 431 cctg--caaaagaagaaattctacctctttctataagatttaatgaaaattgataaatca 488 |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 27924758 cctgaaaaaaagaagaaattctacctctttctataagatttaatgaaaattgagaaatct 27924699 Query: 489 tttaatataattgctatgcttagtgtgtgactcgtta 525 ||||||| ||||||||||||||||||||||||||||| Sbjct: 27924698 tttaataaaattgctatgcttagtgtgtgactcgtta 27924662 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||||||||||| Sbjct: 27924589 actaataaccaacctattgcttcgtattg 27924561
>dbj|AP005452.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0453E03 Length = 159980 Score = 668 bits (337), Expect = 0.0 Identities = 473/517 (91%), Gaps = 4/517 (0%) Strand = Plus / Minus Query: 13 ttaactctgtaaaccagngntttaatatttctatcgaaaaagttaaagaaccttatagac 72 |||| |||||||||||| | |||||||| ||||||||||| |||||||||||||||| Sbjct: 88536 ttaattctgtaaaccagagacttaatattgggatcgaaaaagtgaaagaaccttatagac 88477 Query: 73 agcctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaa 132 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 88476 aacctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaa 88417 Query: 133 aggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaa 192 ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| Sbjct: 88416 aggcaatgaaaaaagccattgaattaactaaaaaaacagatataaagggagtaaaagtaa 88357 Query: 193 aaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggca 252 ||||||| || |||||| |||||||||||||| |||||||||| ||| |||| || | Sbjct: 88356 aaattgcaggctgtctcgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaaggta 88297 Query: 253 gacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaacta 312 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 88296 gacttcccctccaaacaattcgcgctaaaattgattattgctgctatccaattcgaacta 88237 Query: 313 tctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttgt 372 |||||||||||||||| || ||||||||||||||||||||||||||||||| || | ||| Sbjct: 88236 tctatggagtattaggagttaaaatttggatattcgtagacgaagaataaccaaccctgt 88177 Query: 373 cttcgaattctgtccattgatagaataaaaaatgacaagagact--tttttcctgaaatc 430 |||| ||||||| || | |||||||||||||||||||||| || |||| ||| ||||| Sbjct: 88176 cttcccattctgttcagtaatagaataaaaaatgacaagagccttattttccctaaaatc 88117 Query: 431 cctg--caaaagaagaaattctacctctttctataagatttaatgaaaattgataaatca 488 |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 88116 cctgaaaaaaagaagaaattctacctctttctataagatttaatgaaaattgagaaatct 88057 Query: 489 tttaatataattgctatgcttagtgtgtgactcgtta 525 ||||||| ||||||||||||||||||||||||||||| Sbjct: 88056 tttaataaaattgctatgcttagtgtgtgactcgtta 88020 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||||||||||| Sbjct: 87947 actaataaccaacctattgcttcgtattg 87919
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 668 bits (337), Expect = 0.0 Identities = 473/517 (91%), Gaps = 4/517 (0%) Strand = Plus / Plus Query: 13 ttaactctgtaaaccagngntttaatatttctatcgaaaaagttaaagaaccttatagac 72 |||| |||||||||||| | |||||||| ||||||||||| |||||||||||||||| Sbjct: 68578 ttaattctgtaaaccagagacttaatattgggatcgaaaaagtgaaagaaccttatagac 68637 Query: 73 agcctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaa 132 | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68638 aacctaacattcttgtagaatatatagctttccaattaaaaaatagagtttcattccgaa 68697 Query: 133 aggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaa 192 ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| Sbjct: 68698 aggcaatgaaaaaagccattgaattaactaaaaaaacagatataaagggagtaaaagtaa 68757 Query: 193 aaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggca 252 ||||||| || ||||||| |||||||||||||| |||||||||| ||| |||| || | Sbjct: 68758 aaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaaggta 68817 Query: 253 gacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaacta 312 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 68818 gacttcccctccaaacaattcgcgctaaaattgattattgctgctatccaattcgaacta 68877 Query: 313 tctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttgt 372 |||||||||||||||| || ||||||||||||||||||||||||||||||| || | ||| Sbjct: 68878 tctatggagtattaggagttaaaatttggatattcgtagacgaagaataaccaaccctgt 68937 Query: 373 cttcgaattctgtccattgatagaataaaaaatgacaagagact--tttttcctgaaatc 430 |||| ||||||| || | |||||||||||||||||||||| || |||| ||| ||||| Sbjct: 68938 cttcccattctgttcagtaatagaataaaaaatgacaagagccttattttccctaaaatc 68997 Query: 431 cctg--caaaagaagaaattctacctctttctataagatttaatgaaaattgataaatca 488 |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 68998 cctgaaaaaaagaagaaattctacctctttctataagatttaatgaaaattgagaaatct 69057 Query: 489 tttaatataattgctatgcttagtgtgtgactcgtta 525 ||||||| ||||||||||||||||||||||||||||| Sbjct: 69058 tttaataaaattgctatgcttagtgtgtgactcgtta 69094 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||||||||||| Sbjct: 69167 actaataaccaacctattgcttcgtattg 69195
>dbj|AP003825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1343_D04 Length = 143407 Score = 668 bits (337), Expect = 0.0 Identities = 473/517 (91%), Gaps = 4/517 (0%) Strand = Plus / Minus Query: 13 ttaactctgtaaaccagngntttaatatttctatcgaaaaagttaaagaaccttatagac 72 |||| |||||||||||| | |||||||| ||||||||||| |||||||||||||||| Sbjct: 14512 ttaattctgtaaaccagagacttaatattgggatcgaaaaagtgaaagaaccttatagac 14453 Query: 73 agcctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaa 132 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14452 aacctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaa 14393 Query: 133 aggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaa 192 ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| Sbjct: 14392 aggcaatgaaaaaagccattgaattaactaaaaaaacagatataaagggagtaaaagtaa 14333 Query: 193 aaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggca 252 ||||||| || |||||| |||||||||||||| |||||||||| ||| |||| || | Sbjct: 14332 aaattgcaggctgtctcgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaaggta 14273 Query: 253 gacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaacta 312 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 14272 gacttcccctccaaacaattcgcgctaaaattgattattgctgctatccaattcgaacta 14213 Query: 313 tctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttgt 372 |||||||||||||||| || ||||||||||||||||||||||||||||||| || | ||| Sbjct: 14212 tctatggagtattaggagttaaaatttggatattcgtagacgaagaataaccaaccctgt 14153 Query: 373 cttcgaattctgtccattgatagaataaaaaatgacaagagact--tttttcctgaaatc 430 |||| ||||||| || | |||||||||||||||||||||| || |||| ||| ||||| Sbjct: 14152 cttcccattctgttcagtaatagaataaaaaatgacaagagccttattttccctaaaatc 14093 Query: 431 cctg--caaaagaagaaattctacctctttctataagatttaatgaaaattgataaatca 488 |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 14092 cctgaaaaaaagaagaaattctacctctttctataagatttaatgaaaattgagaaatct 14033 Query: 489 tttaatataattgctatgcttagtgtgtgactcgtta 525 ||||||| ||||||||||||||||||||||||||||| Sbjct: 14032 tttaataaaattgctatgcttagtgtgtgactcgtta 13996 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||||||||||| Sbjct: 13923 actaataaccaacctattgcttcgtattg 13895
>dbj|AP005707.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0465E03 Length = 151206 Score = 668 bits (337), Expect = 0.0 Identities = 473/517 (91%), Gaps = 4/517 (0%) Strand = Plus / Plus Query: 13 ttaactctgtaaaccagngntttaatatttctatcgaaaaagttaaagaaccttatagac 72 |||| |||||||||||| | |||||||| ||||||||||| |||||||||||||||| Sbjct: 145796 ttaattctgtaaaccagagacttaatattgggatcgaaaaagtgaaagaaccttatagac 145855 Query: 73 agcctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaa 132 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 145856 aacctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaa 145915 Query: 133 aggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaa 192 ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| Sbjct: 145916 aggcaatgaaaaaagccattgaattaactaaaaaaacagatataaagggagtaaaagtaa 145975 Query: 193 aaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggca 252 ||||||| || ||||||| |||||||||||||| |||||||||| ||| |||| || | Sbjct: 145976 aaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaaggta 146035 Query: 253 gacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaacta 312 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 146036 gacttcccctccaaacaattcgcgctaaaattgattattgctgctatccaattcgaacta 146095 Query: 313 tctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttgt 372 |||||||||||||||| || ||||||||||||||||||||||||||||||| || | ||| Sbjct: 146096 tctatggagtattaggagttaaaatttggatattcgtagacgaagaataaccaaccctgt 146155 Query: 373 cttcgaattctgtccattgatagaataaaaaatgacaagagact--tttttcctgaaatc 430 |||| ||||||| || | | |||||||||||||||||||| || |||| ||| ||||| Sbjct: 146156 cttcccattctgttcagtaagagaataaaaaatgacaagagccttattttccctaaaatc 146215 Query: 431 cctg--caaaagaagaaattctacctctttctataagatttaatgaaaattgataaatca 488 |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 146216 cctgaaaaaaagaagaaattctacctctttctataagatttaatgaaaattgagaaatct 146275 Query: 489 tttaatataattgctatgcttagtgtgtgactcgtta 525 ||||||| ||||||||||||||||||||||||||||| Sbjct: 146276 tttaataaaattgctatgcttagtgtgtgactcgtta 146312 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||||||||||| Sbjct: 146386 actaataaccaacctattgcttcgtattg 146414
>dbj|AP005683.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1585_D02 Length = 103172 Score = 668 bits (337), Expect = 0.0 Identities = 473/517 (91%), Gaps = 4/517 (0%) Strand = Plus / Plus Query: 13 ttaactctgtaaaccagngntttaatatttctatcgaaaaagttaaagaaccttatagac 72 |||| |||||||||||| | |||||||| ||||||||||| |||||||||||||||| Sbjct: 53558 ttaattctgtaaaccagagacttaatattgggatcgaaaaagtgaaagaaccttatagac 53617 Query: 73 agcctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaa 132 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53618 aacctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaa 53677 Query: 133 aggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaa 192 ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| Sbjct: 53678 aggcaatgaaaaaagccattgaattaactaaaaaaacagatataaagggagtaaaagtaa 53737 Query: 193 aaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggca 252 ||||||| || ||||||| |||||||||||||| |||||||||| ||| |||| || | Sbjct: 53738 aaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaaggta 53797 Query: 253 gacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaacta 312 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 53798 gacttcccctccaaacaattcgcgctaaaattgattattgctgctatccaattcgaacta 53857 Query: 313 tctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttgt 372 |||||||||||||||| || ||||||||||||||||||||||||||||||| || | ||| Sbjct: 53858 tctatggagtattaggagttaaaatttggatattcgtagacgaagaataaccaaccctgt 53917 Query: 373 cttcgaattctgtccattgatagaataaaaaatgacaagagact--tttttcctgaaatc 430 |||| ||||||| || | | |||||||||||||||||||| || |||| ||| ||||| Sbjct: 53918 cttcccattctgttcagtaagagaataaaaaatgacaagagccttattttccctaaaatc 53977 Query: 431 cctg--caaaagaagaaattctacctctttctataagatttaatgaaaattgataaatca 488 |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 53978 cctgaaaaaaagaagaaattctacctctttctataagatttaatgaaaattgagaaatct 54037 Query: 489 tttaatataattgctatgcttagtgtgtgactcgtta 525 ||||||| ||||||||||||||||||||||||||||| Sbjct: 54038 tttaataaaattgctatgcttagtgtgtgactcgtta 54074 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||||||||||| Sbjct: 54148 actaataaccaacctattgcttcgtattg 54176
>dbj|AK072149.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128P04, full insert sequence Length = 2475 Score = 668 bits (337), Expect = 0.0 Identities = 473/517 (91%), Gaps = 4/517 (0%) Strand = Plus / Plus Query: 13 ttaactctgtaaaccagngntttaatatttctatcgaaaaagttaaagaaccttatagac 72 |||| |||||||||||| | |||||||| ||||||||||| |||||||||||||||| Sbjct: 1210 ttaattctgtaaaccagagacttaatattgggatcgaaaaagtgaaagaaccttatagac 1269 Query: 73 agcctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaa 132 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1270 aacctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaa 1329 Query: 133 aggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaa 192 ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| Sbjct: 1330 aggcaatgaaaaaagccattgaattaactaaaaaaacagatataaagggagtaaaagtaa 1389 Query: 193 aaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggca 252 ||||||| || ||||||| |||||||||||||| |||||||| | ||| |||| || | Sbjct: 1390 aaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgagtgcatcaaaaaaggta 1449 Query: 253 gacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaacta 312 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1450 gacttcccctccaaacaattcgcgctaaaattgattattgctgctatccaattcgaacta 1509 Query: 313 tctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttgt 372 |||||||||||||||| || ||||||||||||||||||||||||||||||| || | ||| Sbjct: 1510 tctatggagtattaggagttaaaatttggatattcgtagacgaagaataaccaaccctgt 1569 Query: 373 cttcgaattctgtccattgatagaataaaaaatgacaagagact--tttttcctgaaatc 430 |||| ||||||| || | |||||||||||||||||||||| || |||| ||| ||||| Sbjct: 1570 cttcccattctgttcagtaatagaataaaaaatgacaagagccttattttccctaaaatc 1629 Query: 431 cctg--caaaagaagaaattctacctctttctataagatttaatgaaaattgataaatca 488 |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1630 cctgaaaaaaagaagaaattctacctctttctataagatttaatgaaaattgagaaatct 1689 Query: 489 tttaatataattgctatgcttagtgtgtgactcgtta 525 ||||||| ||||||||||||||||||||||||||||| Sbjct: 1690 tttaataaaattgctatgcttagtgtgtgactcgtta 1726 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||||||||||| Sbjct: 1800 actaataaccaacctattgcttcgtattg 1828
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 668 bits (337), Expect = 0.0 Identities = 473/517 (91%), Gaps = 4/517 (0%) Strand = Plus / Minus Query: 13 ttaactctgtaaaccagngntttaatatttctatcgaaaaagttaaagaaccttatagac 72 |||| |||||||||||| | |||||||| ||||||||||| |||||||||||||||| Sbjct: 10377533 ttaattctgtaaaccagagacttaatattgggatcgaaaaagtgaaagaaccttatagac 10377474 Query: 73 agcctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaa 132 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10377473 aacctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaa 10377414 Query: 133 aggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaa 192 ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| Sbjct: 10377413 aggcaatgaaaaaagccattgaattaactaaaaaaacagatataaagggagtaaaagtaa 10377354 Query: 193 aaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggca 252 ||||||| || ||||||| |||||||||||||| |||||||||| ||| |||| || | Sbjct: 10377353 aaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaaggta 10377294 Query: 253 gacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaacta 312 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 10377293 gacttcccctccaaacaattcgcgctaaaattgattattgctgctatccaattcgaacta 10377234 Query: 313 tctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttgt 372 |||||||||||||||| || ||||||||||||||||||||| ||||||||| || | ||| Sbjct: 10377233 tctatggagtattaggagttaaaatttggatattcgtagacaaagaataaccaaccctgt 10377174 Query: 373 cttcgaattctgtccattgatagaataaaaaatgacaagagact--tttttcctgaaatc 430 |||| ||||||| || | |||||||||||||||||||||| || |||| ||| ||||| Sbjct: 10377173 cttcccattctgttcagtaatagaataaaaaatgacaagagccttattttccctaaaatc 10377114 Query: 431 cctg--caaaagaagaaattctacctctttctataagatttaatgaaaattgataaatca 488 |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 10377113 cctgaaaaaaagaagaaattctacctctttctataagatttaatgaaaattgagaaatct 10377054 Query: 489 tttaatataattgctatgcttagtgtgtgactcgtta 525 ||||||| ||||||||||||||||||||||||||||| Sbjct: 10377053 tttaataaaattgctatgcttagtgtgtgactcgtta 10377017 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||||||||||| Sbjct: 10376944 actaataaccaacctattgcttcgtattg 10376916
>dbj|AP005675.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1001_G09 Length = 118018 Score = 638 bits (322), Expect = e-180 Identities = 471/518 (90%), Gaps = 5/518 (0%) Strand = Plus / Plus Query: 13 ttaactctgtaaaccagngntttaatatttctatcgaaaaagttaaagaaccttatagac 72 |||| |||||||||||| | |||||||| ||||||||||| |||||||||||||||| Sbjct: 75690 ttaattctgtaaaccagagacttaatattgggatcgaaaaagtgaaagaaccttatagac 75749 Query: 73 agcctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaa 132 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 75750 aacctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccaaa 75809 Query: 133 aggcaatgaaaaaagccattgaattaactaaaaaag-cagatataaggggagtaaaagta 191 ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 75810 aggcaatgaaaaaagccattgaattaactaaaaaaaacagatataaagggagtaaaagta 75869 Query: 192 aaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggc 251 |||||||| || ||||||| |||||||||||||| |||||||||| ||| |||| | Sbjct: 75870 aaaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaagat 75929 Query: 252 agacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaact 311 |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| Sbjct: 75930 agacttcccctccaaacaattcacgctaaaattgattattgctgctatccaattcgaact 75989 Query: 312 atctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttg 371 ||||||||||||||||| || ||||||||||||||||||||||||||||||| || | || Sbjct: 75990 atctatggagtattaggagttaaaatttggatattcgtagacgaagaataaccaaccctg 76049 Query: 372 tcttcgaattctgtccattgatagaataaaaaatgacaagagact--tttttcctgaaat 429 ||||| ||||||| || | ||||||||||||||||||||| ||| |||| ||| |||| Sbjct: 76050 tcttcccattctgttcagtaatagaataaaaaatgacaagatacttattttccctaaaat 76109 Query: 430 ccctg--caaaagaagaaattctacctctttctataagatttaatgaaaattgataaatc 487 ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 76110 ccctgaaaaaaagaagaaattctacctctttctataagatttaatgaaaattgagaaatc 76169 Query: 488 atttaatataattgctatgcttagtgtgtgactcgtta 525 ||||||| ||||||||||||||||||||||||||||| Sbjct: 76170 ttttaataaaattgctatgcttagtgtgtgactcgtta 76207 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||||||||||| Sbjct: 76278 actaataaccaacctattgcttcgtattg 76306
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 613 bits (309), Expect = e-172 Identities = 467/517 (90%), Gaps = 5/517 (0%) Strand = Plus / Minus Query: 13 ttaactctgtaaaccagngntttaatatttctatcgaaaaagttaaagaaccttatagac 72 |||| |||||||||||| | |||||||| |||||||||| ||||||||||||||||||| Sbjct: 2603 ttaattctgtaaaccagagacttaatattgctatcgaaaaggttaaagaaccttatagac 2544 Query: 73 agcctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaa 132 | ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2543 aacctaatattcttgcggaatatatagctttccaattaaaaaatagagtttcattccgaa 2484 Query: 133 aggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaa 192 | |||||||||||||| |||||||||||||||||||| ||||||| |||| ||||| | Sbjct: 2483 aagcaatgaaaaaagctattgaattaactaaaaaagcggatataaagggaataaaaatcc 2424 Query: 193 aaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggca 252 |||||||||||||||| | |||||||||||||||||||||||||| ||| |||| ||| | Sbjct: 2423 aaattgcgggtcgtctagcaggaaaagaaattgcacgtgccgaatgcatcaaaaagggta 2364 Query: 253 gacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaacta 312 |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 2363 gactacccctccaaacaattcgcgctaaaattgattattgctgctatccaattcgaacta 2304 Query: 313 tctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttgt 372 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||| | ||| Sbjct: 2303 tctatggagtattaggtgtcaaaatttggatattcgtagaagaagaataactaaccatgt 2244 Query: 373 cttcgaattctgtccattgatagaataaaaaatgacaagagact--tttttcctgaaatc 430 |||| |||| | ||| ||||||||||||||| ||||||| || ||||||| ||||| Sbjct: 2243 cttcccattccgcccagtgatagaataaaaaa-gacaagaaccttgtttttccaaaaatc 2185 Query: 431 cct--gcaaaagaagaaattctacctctttctataagatttaatgaaaattgataaatca 488 ||| ||||||||||| | | |||||||||||||||||||||||||||| ||||||| Sbjct: 2184 cctaaaaaaaagaagaaagtatccctctttctataagatttaatgaaaattaataaatct 2125 Query: 489 tttaatataattgctatgcttagtgtgtgactcgtta 525 ||||||||||||||||||||||||||||||||||||| Sbjct: 2124 tttaatataattgctatgcttagtgtgtgactcgtta 2088 Score = 58.0 bits (29), Expect = 4e-05 Identities = 49/56 (87%), Gaps = 6/56 (10%) Strand = Plus / Minus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 ||||||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 2023 cttagtaatgatagaaaatta------actaataaccaacctattgcttcgtattg 1974
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 613 bits (309), Expect = e-172 Identities = 467/517 (90%), Gaps = 5/517 (0%) Strand = Plus / Minus Query: 13 ttaactctgtaaaccagngntttaatatttctatcgaaaaagttaaagaaccttatagac 72 |||| |||||||||||| | |||||||| |||||||||| ||||||||||||||||||| Sbjct: 82160 ttaattctgtaaaccagagacttaatattgctatcgaaaaggttaaagaaccttatagac 82101 Query: 73 agcctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaa 132 | ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 82100 aacctaatattcttgcggaatatatagctttccaattaaaaaatagagtttcattccgaa 82041 Query: 133 aggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaa 192 | |||||||||||||| |||||||||||||||||||| ||||||| |||| ||||| | Sbjct: 82040 aagcaatgaaaaaagctattgaattaactaaaaaagcggatataaagggaataaaaatcc 81981 Query: 193 aaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggca 252 |||||||||||||||| | |||||||||||||||||||||||||| ||| |||| ||| | Sbjct: 81980 aaattgcgggtcgtctagcaggaaaagaaattgcacgtgccgaatgcatcaaaaagggta 81921 Query: 253 gacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaacta 312 |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 81920 gactacccctccaaacaattcgcgctaaaattgattattgctgctatccaattcgaacta 81861 Query: 313 tctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttgt 372 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||| | ||| Sbjct: 81860 tctatggagtattaggtgtcaaaatttggatattcgtagaagaagaataactaaccatgt 81801 Query: 373 cttcgaattctgtccattgatagaataaaaaatgacaagagact--tttttcctgaaatc 430 |||| |||| | ||| ||||||||||||||| ||||||| || ||||||| ||||| Sbjct: 81800 cttcccattccgcccagtgatagaataaaaaa-gacaagaaccttgtttttccaaaaatc 81742 Query: 431 cct--gcaaaagaagaaattctacctctttctataagatttaatgaaaattgataaatca 488 ||| ||||||||||| | | |||||||||||||||||||||||||||| ||||||| Sbjct: 81741 cctaaaaaaaagaagaaagtatccctctttctataagatttaatgaaaattaataaatct 81682 Query: 489 tttaatataattgctatgcttagtgtgtgactcgtta 525 ||||||||||||||||||||||||||||||||||||| Sbjct: 81681 tttaatataattgctatgcttagtgtgtgactcgtta 81645 Score = 58.0 bits (29), Expect = 4e-05 Identities = 49/56 (87%), Gaps = 6/56 (10%) Strand = Plus / Minus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 ||||||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 81580 cttagtaatgatagaaaatta------actaataaccaacctattgcttcgtattg 81531
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 605 bits (305), Expect = e-170 Identities = 466/517 (90%), Gaps = 5/517 (0%) Strand = Plus / Minus Query: 13 ttaactctgtaaaccagngntttaatatttctatcgaaaaagttaaagaaccttatagac 72 |||| |||||||||||| | |||||||| |||||||||| ||||||||||||||||||| Sbjct: 81492 ttaattctgtaaaccagagacttaatattgctatcgaaaaggttaaagaaccttatagac 81433 Query: 73 agcctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaa 132 | ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 81432 aacctaatattcttgcggaatatatagctttccaattaaaaaatagagtttcattccgaa 81373 Query: 133 aggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaa 192 | |||||||||||||| |||||||||||||||||||| ||||||| |||| ||||| | Sbjct: 81372 aagcaatgaaaaaagctattgaattaactaaaaaagcggatataaagggaataaaaatcc 81313 Query: 193 aaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggca 252 |||||||||||||||| | |||||||||||||||||||||||||| ||| |||| ||| | Sbjct: 81312 aaattgcgggtcgtctagcaggaaaagaaattgcacgtgccgaatgcatcaaaaagggta 81253 Query: 253 gacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaacta 312 |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 81252 gactacccctccaaacaattcgcgctaaaattgattattgctgctatccaattcgaacta 81193 Query: 313 tctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttgt 372 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||| | ||| Sbjct: 81192 tctatggagtattaggtgtcaaaatttggatattcgtagaagaagaataactaaccatgt 81133 Query: 373 cttcgaattctgtccattgatagaataaaaaatgacaagagact--tttttcctgaaatc 430 |||| |||| | ||| ||||||||||||||| ||||||| || ||||||| ||||| Sbjct: 81132 cttcccattccgcccagtgatagaataaaaaa-gacaagaaccttgtttttccaaaaatc 81074 Query: 431 cct--gcaaaagaagaaattctacctctttctataagatttaatgaaaattgataaatca 488 ||| ||||||||||| | | |||||||||||||||||||||||||||| | ||||| Sbjct: 81073 cctaaaaaaaagaagaaagtatccctctttctataagatttaatgaaaattaagaaatct 81014 Query: 489 tttaatataattgctatgcttagtgtgtgactcgtta 525 ||||||||||||||||||||||||||||||||||||| Sbjct: 81013 tttaatataattgctatgcttagtgtgtgactcgtta 80977 Score = 58.0 bits (29), Expect = 4e-05 Identities = 49/56 (87%), Gaps = 6/56 (10%) Strand = Plus / Minus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 ||||||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 80944 cttagtaatgatagaaaatta------actaataaccaacctattgcttcgtattg 80895
>dbj|AK060382.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-E08, full insert sequence Length = 622 Score = 537 bits (271), Expect = e-149 Identities = 368/401 (91%) Strand = Plus / Plus Query: 13 ttaactctgtaaaccagngntttaatatttctatcgaaaaagttaaagaaccttatagac 72 |||| |||||||||||| | |||||||| ||||||||||| |||||||||||||||| Sbjct: 199 ttaattctgtaaaccagagacttaatattgggatcgaaaaagtgaaagaaccttatagac 258 Query: 73 agcctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaa 132 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 259 aacctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaa 318 Query: 133 aggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaa 192 ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| Sbjct: 319 aggcaatgaaaaaagccattgaattaactaaaaaaacagatataaagggagtaaaagtaa 378 Query: 193 aaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggca 252 ||||||| || ||||||| |||||||||||||| |||||||| | ||| |||| || | Sbjct: 379 aaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgagtgcatcaaaaaaggta 438 Query: 253 gacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaacta 312 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 439 gacttcccctccaaacaattcgcgctaaaattgattattgctgctatccaattcgaacta 498 Query: 313 tctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttgt 372 |||||||||||||||| || ||||||||||||||||||||||||||||||| || | ||| Sbjct: 499 tctatggagtattaggagttaaaatttggatattcgtagacgaagaataaccaaccctgt 558 Query: 373 cttcgaattctgtccattgatagaataaaaaatgacaagag 413 |||| ||||||| || | |||||||||||||||||||||| Sbjct: 559 cttcccattctgttcagtaatagaataaaaaatgacaagag 599
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 527 bits (266), Expect = e-146 Identities = 443/499 (88%), Gaps = 4/499 (0%) Strand = Plus / Minus Query: 13 ttaactctgtaaaccagngntttaatatttctatcgaaaaagttaaagaaccttatagac 72 |||| |||||||||||| | |||||||| ||||||||||| |||||| ||||||||| Sbjct: 17405191 ttaattctgtaaaccagagacttaatattgggatcgaaaaagtgaaagaatcttatagac 17405132 Query: 73 agcctaacattcttgcagaatatatagctttccaattaaaaaa-tagagtttcattccga 131 | |||| |||||||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 17405131 aacctatcattcttgtagaatatatagctttccaattaaaaaaatagagtttcattccga 17405072 Query: 132 aaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagta 191 |||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 17405071 aaggcaatgaaaaaaggcattgaattaactaaaaaaatggatataaagggagtaaaagta 17405012 Query: 192 aaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggc 251 |||||||| || ||||||| |||||||||||||| |||||||||| ||| |||| || Sbjct: 17405011 aaaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaaggt 17404952 Query: 252 agacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaact 311 |||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||| Sbjct: 17404951 agacttcccctccaaacaattcgtgctaaaattgattattgctgctattcaattcgaact 17404892 Query: 312 atctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttg 371 ||||||||||||||||| || ||||||||||||||||||||||||||||||| || | || Sbjct: 17404891 atctatggagtattaggagttaaaatttggatattcgtagacgaagaataaccaaccctg 17404832 Query: 372 tcttcgaattctgtccattgatagaataaaaaatgacaagagact--tttttcctgaaat 429 ||||| ||| ||| || | |||||||||||||||||||||| || |||| ||| |||| Sbjct: 17404831 tcttcccattatgttcagtaatagaataaaaaatgacaagagcctcattttccctaaaat 17404772 Query: 430 ccct-gcaaaagaagaaattctacctctttctataagatttaatgaaaattgataaatca 488 |||| ||||||||||||| || ||||||||||||||||||||||||||| | ||||| Sbjct: 17404771 ccctaaaaaaagaagaaattatatctctttctataagatttaatgaaaattaagaaatct 17404712 Query: 489 tttaatataattgctatgc 507 ||||||| ||||||||||| Sbjct: 17404711 tttaataaaattgctatgc 17404693 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 488 atttaatataattgctatgct 508 ||||||||||||||||||||| Sbjct: 10776946 atttaatataattgctatgct 10776926 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 94 atatagctttccaattaaaaaata 117 |||||| ||||||||||||||||| Sbjct: 2333544 atatagatttccaattaaaaaata 2333521
>dbj|AP003203.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1080D07 Length = 173856 Score = 527 bits (266), Expect = e-146 Identities = 443/499 (88%), Gaps = 4/499 (0%) Strand = Plus / Minus Query: 13 ttaactctgtaaaccagngntttaatatttctatcgaaaaagttaaagaaccttatagac 72 |||| |||||||||||| | |||||||| ||||||||||| |||||| ||||||||| Sbjct: 171452 ttaattctgtaaaccagagacttaatattgggatcgaaaaagtgaaagaatcttatagac 171393 Query: 73 agcctaacattcttgcagaatatatagctttccaattaaaaaa-tagagtttcattccga 131 | |||| |||||||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 171392 aacctatcattcttgtagaatatatagctttccaattaaaaaaatagagtttcattccga 171333 Query: 132 aaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagta 191 |||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 171332 aaggcaatgaaaaaaggcattgaattaactaaaaaaatggatataaagggagtaaaagta 171273 Query: 192 aaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggc 251 |||||||| || ||||||| |||||||||||||| |||||||||| ||| |||| || Sbjct: 171272 aaaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaaggt 171213 Query: 252 agacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaact 311 |||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||| Sbjct: 171212 agacttcccctccaaacaattcgtgctaaaattgattattgctgctattcaattcgaact 171153 Query: 312 atctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttg 371 ||||||||||||||||| || ||||||||||||||||||||||||||||||| || | || Sbjct: 171152 atctatggagtattaggagttaaaatttggatattcgtagacgaagaataaccaaccctg 171093 Query: 372 tcttcgaattctgtccattgatagaataaaaaatgacaagagact--tttttcctgaaat 429 ||||| ||| ||| || | |||||||||||||||||||||| || |||| ||| |||| Sbjct: 171092 tcttcccattatgttcagtaatagaataaaaaatgacaagagcctcattttccctaaaat 171033 Query: 430 ccct-gcaaaagaagaaattctacctctttctataagatttaatgaaaattgataaatca 488 |||| ||||||||||||| || ||||||||||||||||||||||||||| | ||||| Sbjct: 171032 ccctaaaaaaagaagaaattatatctctttctataagatttaatgaaaattaagaaatct 170973 Query: 489 tttaatataattgctatgc 507 ||||||| ||||||||||| Sbjct: 170972 tttaataaaattgctatgc 170954
>dbj|AP003144.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0507H06 Length = 136351 Score = 527 bits (266), Expect = e-146 Identities = 443/499 (88%), Gaps = 4/499 (0%) Strand = Plus / Minus Query: 13 ttaactctgtaaaccagngntttaatatttctatcgaaaaagttaaagaaccttatagac 72 |||| |||||||||||| | |||||||| ||||||||||| |||||| ||||||||| Sbjct: 58583 ttaattctgtaaaccagagacttaatattgggatcgaaaaagtgaaagaatcttatagac 58524 Query: 73 agcctaacattcttgcagaatatatagctttccaattaaaaaa-tagagtttcattccga 131 | |||| |||||||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 58523 aacctatcattcttgtagaatatatagctttccaattaaaaaaatagagtttcattccga 58464 Query: 132 aaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagta 191 |||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||| Sbjct: 58463 aaggcaatgaaaaaaggcattgaattaactaaaaaaatggatataaagggagtaaaagta 58404 Query: 192 aaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggc 251 |||||||| || ||||||| |||||||||||||| |||||||||| ||| |||| || Sbjct: 58403 aaaattgcaggccgtctcgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaaggt 58344 Query: 252 agacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaact 311 |||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||| Sbjct: 58343 agacttcccctccaaacaattcgtgctaaaattgattattgctgctattcaattcgaact 58284 Query: 312 atctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttg 371 ||||||||||||||||| || ||||||||||||||||||||||||||||||| || | || Sbjct: 58283 atctatggagtattaggagttaaaatttggatattcgtagacgaagaataaccaaccctg 58224 Query: 372 tcttcgaattctgtccattgatagaataaaaaatgacaagagact--tttttcctgaaat 429 ||||| ||| ||| || | |||||||||||||||||||||| || |||| ||| |||| Sbjct: 58223 tcttcccattatgttcagtaatagaataaaaaatgacaagagcctcattttccctaaaat 58164 Query: 430 ccct-gcaaaagaagaaattctacctctttctataagatttaatgaaaattgataaatca 488 |||| ||||||||||||| || ||||||||||||||||||||||||||| | ||||| Sbjct: 58163 ccctaaaaaaagaagaaattatatctctttctataagatttaatgaaaattaagaaatct 58104 Query: 489 tttaatataattgctatgc 507 ||||||| ||||||||||| Sbjct: 58103 tttaataaaattgctatgc 58085
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 504 bits (254), Expect = e-139 Identities = 358/392 (91%), Gaps = 1/392 (0%) Strand = Plus / Minus Query: 13 ttaactctgtaaaccagngntttaatatttctatcgaaaaagttaaagaaccttatagac 72 |||| |||||||||||| | |||||||| |||||||||| ||||||||||||||||||| Sbjct: 81462 ttaattctgtaaaccagagacttaatattgctatcgaaaaggttaaagaaccttatagac 81403 Query: 73 agcctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaa 132 | ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 81402 aacctaatattcttgcggaatatatagctttccaattaaaaaatagagtttcattccgaa 81343 Query: 133 aggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaa 192 | |||||||||||||| |||||||||||||||||||| ||||||| |||| ||||| | Sbjct: 81342 aagcaatgaaaaaagctattgaattaactaaaaaagcggatataaagggaataaaaatcc 81283 Query: 193 aaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggca 252 |||||||||||||||| | |||||||||||||||||||||||||| ||| |||| ||| | Sbjct: 81282 aaattgcgggtcgtctagcaggaaaagaaattgcacgtgccgaatgcatcaaaaagggta 81223 Query: 253 gacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaacta 312 |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 81222 gactacccctccaaacaattcgcgctaaaattgattattgctgctatccaattcgaacta 81163 Query: 313 tctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttgt 372 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||| | ||| Sbjct: 81162 tctatggagtattaggtgtcaaaatttggatattcgtagaagaagaataactaaccatgt 81103 Query: 373 cttcgaattctgtccattgatagaataaaaaa 404 |||| |||| | ||| ||||||||||||||| Sbjct: 81102 cttcccattccg-ccagtgatagaataaaaaa 81072 Score = 113 bits (57), Expect = 7e-22 Identities = 66/69 (95%) Strand = Plus / Minus Query: 452 cctctttctataagatttaatgaaaattgataaatcatttaatataattgctatgcttag 511 |||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||| Sbjct: 81023 cctctttctataagatttaatgaaaattaagaaatcttttaatataattgctatgcttag 80964 Query: 512 tgtgtgact 520 ||||||||| Sbjct: 80963 tgtgtgact 80955 Score = 58.0 bits (29), Expect = 4e-05 Identities = 49/56 (87%), Gaps = 6/56 (10%) Strand = Plus / Minus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 ||||||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 80918 cttagtaatgatagaaaatta------actaataaccaacctattgcttcgtattg 80869
>emb|Y00340.1|CHZMRPS3 Maize chloroplast rps3 gene for ribosomal protein S3 Length = 731 Score = 496 bits (250), Expect = e-137 Identities = 335/364 (92%) Strand = Plus / Plus Query: 13 ttaactctgtaaaccagngntttaatatttctatcgaaaaagttaaagaaccttatagac 72 |||| |||||||||||| | |||||||| |||||||||| ||||||||||||||||||| Sbjct: 354 ttaattctgtaaaccagagacttaatattgctatcgaaaaggttaaagaaccttatagac 413 Query: 73 agcctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaa 132 | ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 414 aacctaatattcttgcggaatatatagctttccaattaaaaaatagagtttcattccgaa 473 Query: 133 aggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaa 192 | |||||||||||||| |||||||||||||||||||| ||||||| |||| ||||| | Sbjct: 474 aagcaatgaaaaaagctattgaattaactaaaaaagcggatataaagggaataaaaatcc 533 Query: 193 aaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggca 252 |||||||||||||||| | |||||||||||||||||||||||||| ||| |||| ||| | Sbjct: 534 aaattgcgggtcgtctagcaggaaaagaaattgcacgtgccgaatgcatcaaaaagggta 593 Query: 253 gacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaacta 312 |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 594 gactacccctccaaacaattcgcgctaaaattgattattgctgctatccaattcgaacta 653 Query: 313 tctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttgt 372 ||||||||||||||||||| |||||||||||||||||||| ||||||||||||| | ||| Sbjct: 654 tctatggagtattaggtgtcaaaatttggatattcgtagaagaagaataactaaccatgt 713 Query: 373 cttc 376 |||| Sbjct: 714 cttc 717
>gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0006J12, complete sequence Length = 157069 Score = 418 bits (211), Expect = e-114 Identities = 341/381 (89%), Gaps = 5/381 (1%) Strand = Plus / Plus Query: 149 cattgaattaactaaaaaagcagatataaggggagtaaaagtaaaaattgcgggtcgtct 208 ||||||||||||||||||| || |||||| ||||||||||||||||||||| || ||||| Sbjct: 144185 cattgaattaactaaaaaa-catatataaagggagtaaaagtaaaaattgcaggccgtct 144243 Query: 209 cggaggaaaagaaattgcacgtgccgaatccattaaaaggggcagacttcccctccaaac 268 || |||||||||||||| |||||||||| ||| |||| || ||||||||||||||||| Sbjct: 144244 cgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaaggtagacttcccctccaaac 144303 Query: 269 aatccgcgctaaaattgattattgctgctatccaattcgaactatctatggagtattagg 328 ||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 144304 aattcgatctaaaattgattattgctgctatccaattcgaactatctatggagtattagg 144363 Query: 329 tgtaaaaatttggatattcgtagacgaagaataactaatcttgtcttcgaattctgtcca 388 || |||||||||||||||||||| |||||||||| || | ||||||| ||||||| | Sbjct: 144364 agttaaaatttggatattcgtagatgaagaataaccaaccctgtcttcccattctgttaa 144423 Query: 389 ttgatagaataaaaaatgacaagagact--tttttcctgaaatccctg--caaaagaaga 444 | |||||||||||||||||||||| || |||| ||| ||||||||| ||||||||| Sbjct: 144424 gtaatagaataaaaaatgacaagagccttattttccctaaaatccctgaaaaaaagaaga 144483 Query: 445 aattctacctctttctataagatttaatgaaaattgataaatcatttaatataattgcta 504 ||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 144484 aattctacctctttctataagatttaatgaaaattgagaaatcttttaataaaattgcta 144543 Query: 505 tgcttagtgtgtgactcgtta 525 || |||||||||||||||||| Sbjct: 144544 tgtttagtgtgtgactcgtta 144564 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||||||||||| Sbjct: 144635 actaataaccaacctattgcttcgtattg 144663
>gb|AC104708.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1174_H11, complete sequence Length = 102567 Score = 418 bits (211), Expect = e-114 Identities = 341/381 (89%), Gaps = 5/381 (1%) Strand = Plus / Plus Query: 149 cattgaattaactaaaaaagcagatataaggggagtaaaagtaaaaattgcgggtcgtct 208 ||||||||||||||||||| || |||||| ||||||||||||||||||||| || ||||| Sbjct: 3372 cattgaattaactaaaaaa-catatataaagggagtaaaagtaaaaattgcaggccgtct 3430 Query: 209 cggaggaaaagaaattgcacgtgccgaatccattaaaaggggcagacttcccctccaaac 268 || |||||||||||||| |||||||||| ||| |||| || ||||||||||||||||| Sbjct: 3431 cgcgggaaaagaaattgcgcgtgccgaatgcatcaaaaaaggtagacttcccctccaaac 3490 Query: 269 aatccgcgctaaaattgattattgctgctatccaattcgaactatctatggagtattagg 328 ||| || |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3491 aattcgatctaaaattgattattgctgctatccaattcgaactatctatggagtattagg 3550 Query: 329 tgtaaaaatttggatattcgtagacgaagaataactaatcttgtcttcgaattctgtcca 388 || |||||||||||||||||||| |||||||||| || | ||||||| ||||||| | Sbjct: 3551 agttaaaatttggatattcgtagatgaagaataaccaaccctgtcttcccattctgttaa 3610 Query: 389 ttgatagaataaaaaatgacaagagact--tttttcctgaaatccctg--caaaagaaga 444 | |||||||||||||||||||||| || |||| ||| ||||||||| ||||||||| Sbjct: 3611 gtaatagaataaaaaatgacaagagccttattttccctaaaatccctgaaaaaaagaaga 3670 Query: 445 aattctacctctttctataagatttaatgaaaattgataaatcatttaatataattgcta 504 ||||||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||| Sbjct: 3671 aattctacctctttctataagatttaatgaaaattgagaaatcttttaataaaattgcta 3730 Query: 505 tgcttagtgtgtgactcgtta 525 || |||||||||||||||||| Sbjct: 3731 tgtttagtgtgtgactcgtta 3751 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||||||||||| Sbjct: 3822 actaataaccaacctattgcttcgtattg 3850
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 270 bits (136), Expect = 5e-69 Identities = 205/226 (90%), Gaps = 4/226 (1%) Strand = Plus / Plus Query: 304 ttcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataac 363 ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| Sbjct: 23179707 ttcgaactatctatggagtattaggagttaaaatttggatattcgtagacgaagaataac 23179766 Query: 364 taatcttgtcttcgaattctgtccattgatagaataaaaaatgacaagagactttttt-- 421 || | ||||||| ||||||| || | |||||||||||||||||||||| ||| ||| Sbjct: 23179767 caaccctgtcttcccattctgttcagtaatagaataaaaaatgacaagagccttattttc 23179826 Query: 422 cctgaaatccctgcaaaa--gaagaaattctacctctttctataagatttaatgaaaatt 479 ||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 23179827 cctaaaatccctgaaaaaaagaagaaattctacctctttctataagatttaatgaaaatt 23179886 Query: 480 gataaatcatttaatataattgctatgcttagtgtgtgactcgtta 525 || ||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 23179887 gagaaatcttttaataaaattgctatgcttagtgtgtgactcgtta 23179932 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||||||||||| Sbjct: 23180003 actaataaccaacctattgcttcgtattg 23180031 Score = 44.1 bits (22), Expect = 0.53 Identities = 80/98 (81%), Gaps = 1/98 (1%) Strand = Plus / Plus Query: 174 ataaggggagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgcc 233 |||| |||||| |||||||||||||| | | ||||| || |||||||||| | |||| | Sbjct: 28024386 ataaagggagttaaagtaaaaattgcatgccatctcgtagaaaaagaaattacgcgtgtc 28024445 Query: 234 gaatccattaaaaggggcagacttcccctccaaacaat 271 |||| ||| |||| || ||||||| |||| ||||||| Sbjct: 28024446 gaatacatgaaaa-aggtagacttcacctctaaacaat 28024482 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 488 atttaatataattgctatgcttagt 512 ||||||||||||| ||||||||||| Sbjct: 19457851 atttaatataattcctatgcttagt 19457827
>dbj|AP004236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0417D05 Length = 165752 Score = 270 bits (136), Expect = 5e-69 Identities = 205/226 (90%), Gaps = 4/226 (1%) Strand = Plus / Plus Query: 304 ttcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataac 363 ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| Sbjct: 130355 ttcgaactatctatggagtattaggagttaaaatttggatattcgtagacgaagaataac 130414 Query: 364 taatcttgtcttcgaattctgtccattgatagaataaaaaatgacaagagactttttt-- 421 || | ||||||| ||||||| || | |||||||||||||||||||||| ||| ||| Sbjct: 130415 caaccctgtcttcccattctgttcagtaatagaataaaaaatgacaagagccttattttc 130474 Query: 422 cctgaaatccctgcaaaa--gaagaaattctacctctttctataagatttaatgaaaatt 479 ||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 130475 cctaaaatccctgaaaaaaagaagaaattctacctctttctataagatttaatgaaaatt 130534 Query: 480 gataaatcatttaatataattgctatgcttagtgtgtgactcgtta 525 || ||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 130535 gagaaatcttttaataaaattgctatgcttagtgtgtgactcgtta 130580 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||||||||||| Sbjct: 130651 actaataaccaacctattgcttcgtattg 130679
>dbj|AP003623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0642B07 Length = 139297 Score = 270 bits (136), Expect = 5e-69 Identities = 205/226 (90%), Gaps = 4/226 (1%) Strand = Plus / Plus Query: 304 ttcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataac 363 ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| Sbjct: 14469 ttcgaactatctatggagtattaggagttaaaatttggatattcgtagacgaagaataac 14528 Query: 364 taatcttgtcttcgaattctgtccattgatagaataaaaaatgacaagagactttttt-- 421 || | ||||||| ||||||| || | |||||||||||||||||||||| ||| ||| Sbjct: 14529 caaccctgtcttcccattctgttcagtaatagaataaaaaatgacaagagccttattttc 14588 Query: 422 cctgaaatccctgcaaaa--gaagaaattctacctctttctataagatttaatgaaaatt 479 ||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 14589 cctaaaatccctgaaaaaaagaagaaattctacctctttctataagatttaatgaaaatt 14648 Query: 480 gataaatcatttaatataattgctatgcttagtgtgtgactcgtta 525 || ||||| ||||||| ||||||||||||||||||||||||||||| Sbjct: 14649 gagaaatcttttaataaaattgctatgcttagtgtgtgactcgtta 14694 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||||||||||| Sbjct: 14765 actaataaccaacctattgcttcgtattg 14793
>gb|DQ069461.1| Typha latifolia ribosomal protein S3 (rps3) gene, partial cds; chloroplast Length = 654 Score = 236 bits (119), Expect = 7e-59 Identities = 251/295 (85%) Strand = Plus / Plus Query: 61 aaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatagag 120 |||||||| |||| ||||| |||||| |||||||||||||||| |||||||||||||||| Sbjct: 356 aaccttatggacaacctaatattctttcagaatatatagctttacaattaaaaaatagag 415 Query: 121 tttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggg 180 |||| || ||||| |||||||||||||| |||||||||||| || || | |||| || | Sbjct: 416 tttcgtttcgaaaagcaatgaaaaaagctattgaattaactgaacaaacggatacaaaag 475 Query: 181 gagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatcca 240 || | |||| ||||||| || ||| ||| ||||||||||||||||||| ||||| | Sbjct: 476 gaattcaagtgcaaattgcaggccgtatcgacggaaaagaaattgcacgtgtcgaatgga 535 Query: 241 ttaaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgctatc 300 | | | ||| ||| ||||||| |||||||| ||||||||||||||| |||| | |||| Sbjct: 536 tcagagagggtagagttcccctacaaacaattcgcgctaaaattgatcattgttcctata 595 Query: 301 caattcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacga 355 |||||||||||||||||||||||||||| |||||||||||||||| |||||||| Sbjct: 596 caattcgaactatctatggagtattaggcataaaaatttggatatttgtagacga 650
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 234 bits (118), Expect = 3e-58 Identities = 206/233 (88%), Gaps = 3/233 (1%) Strand = Plus / Minus Query: 252 agacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaact 311 ||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 9414579 agacttcccctacaaacaattcgcgctaaaattgattattgctgctatccaatctgaact 9414520 Query: 312 atctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttg 371 ||||||||||||||||| || |||||||||||||||||||| ||| |||||| || | || Sbjct: 9414519 atctatggagtattaggagttaaaatttggatattcgtagatgaataataaccaaccctg 9414460 Query: 372 tcttcgaattctgtccattgatagaataaaaaatgacaagagact--tttttcctgaaat 429 |||| ||||||| || | |||||||||||||||||||||| || |||| ||| || | Sbjct: 9414459 tctttccattctgttcagtaatagaataaaaaatgacaagagccttattttccctaaatt 9414400 Query: 430 ccctg-caaaagaagaaattctacctctttctataagatttaatgaaaattga 481 | ||| ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 9414399 ctctgaaaaaagaagaaattctacctctttatataagatttaatgaaaattga 9414347 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 562 tatagaaaattaactaatactaataacca 590 ||||||| |||||||||||||||||||| Sbjct: 1793022 tatagaagtttaactaatactaataacca 1792994
>dbj|AP004683.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0006C08 Length = 151987 Score = 234 bits (118), Expect = 3e-58 Identities = 206/233 (88%), Gaps = 3/233 (1%) Strand = Plus / Minus Query: 252 agacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaact 311 ||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 28140 agacttcccctacaaacaattcgcgctaaaattgattattgctgctatccaatctgaact 28081 Query: 312 atctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttg 371 ||||||||||||||||| || |||||||||||||||||||| ||| |||||| || | || Sbjct: 28080 atctatggagtattaggagttaaaatttggatattcgtagatgaataataaccaaccctg 28021 Query: 372 tcttcgaattctgtccattgatagaataaaaaatgacaagagact--tttttcctgaaat 429 |||| ||||||| || | |||||||||||||||||||||| || |||| ||| || | Sbjct: 28020 tctttccattctgttcagtaatagaataaaaaatgacaagagccttattttccctaaatt 27961 Query: 430 ccctg-caaaagaagaaattctacctctttctataagatttaatgaaaattga 481 | ||| ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 27960 ctctgaaaaaagaagaaattctacctctttatataagatttaatgaaaattga 27908
>dbj|AP005924.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0011J03 Length = 176461 Score = 234 bits (118), Expect = 3e-58 Identities = 206/233 (88%), Gaps = 3/233 (1%) Strand = Plus / Minus Query: 252 agacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaact 311 ||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 174833 agacttcccctacaaacaattcgcgctaaaattgattattgctgctatccaatctgaact 174774 Query: 312 atctatggagtattaggtgtaaaaatttggatattcgtagacgaagaataactaatcttg 371 ||||||||||||||||| || |||||||||||||||||||| ||| |||||| || | || Sbjct: 174773 atctatggagtattaggagttaaaatttggatattcgtagatgaataataaccaaccctg 174714 Query: 372 tcttcgaattctgtccattgatagaataaaaaatgacaagagact--tttttcctgaaat 429 |||| ||||||| || | |||||||||||||||||||||| || |||| ||| || | Sbjct: 174713 tctttccattctgttcagtaatagaataaaaaatgacaagagccttattttccctaaatt 174654 Query: 430 ccctg-caaaagaagaaattctacctctttctataagatttaatgaaaattga 481 | ||| ||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 174653 ctctgaaaaaagaagaaattctacctctttatataagatttaatgaaaattga 174601
>gb|DQ069462.1| Yucca schidigera ribosomal protein S3 (rps3) gene, partial cds; chloroplast Length = 660 Score = 204 bits (103), Expect = 2e-49 Identities = 250/299 (83%) Strand = Plus / Plus Query: 61 aaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatagag 120 |||||||| |||| ||||| ||||||||||||||||| |||| ||||||| |||||||| Sbjct: 362 aaccttatggacaccctaatattcttgcagaatatatggcttcacaattaagaaatagag 421 Query: 121 tttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggg 180 |||| ||||||||||||||||||| ||| |||||||||||| || || |||||| || || Sbjct: 422 tttcgttccgaaaggcaatgaaaagagctattgaattaactgaacaaacagatacaaagg 481 Query: 181 gagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatcca 240 || | || || ||||||| || ||| ||| ||||||||||||||||||| ||||| | Sbjct: 482 gaattcaaatacaaattgcagggcgtatcgacggaaaagaaattgcacgtgtcgaatgga 541 Query: 241 ttaaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgctatc 300 | | | || || |||| || |||||||| ||||||||||||||| |||| | |||| Sbjct: 542 tcagagaaggtagggttcctctacaaacaattcgcgctaaaattgatcattgttcctata 601 Query: 301 caattcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaagaa 359 |||||||||||||| ||||||||||||| |||||||||||||||| || || |||||| Sbjct: 602 caattcgaactatccatggagtattaggcctaaaaatttggatatttgtggatgaagaa 660
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 163 bits (82), Expect = 8e-37 Identities = 247/302 (81%) Strand = Plus / Minus Query: 61 aaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatagag 120 |||||||| |||| ||||| ||||||||||||||||||||| |||||||| ||||||| Sbjct: 84232 aaccttatggacaacctaatattcttgcagaatatatagctcgacaattaaagaatagag 84173 Query: 121 tttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggg 180 |||| || ||||||||||||||||||| |||||||||||| || |||| || | || | Sbjct: 84172 tttcctttcgaaaggcaatgaaaaaagttattgaattaactgaacaagcggacacaaaag 84113 Query: 181 gagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatcca 240 || | |||| ||||||| || ||| ||| ||||||||||||||||||| ||||| | Sbjct: 84112 gaattcaagtgcaaattgcagggcgtatcgacggaaaagaaattgcacgtgtcgaatgga 84053 Query: 241 ttaaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgctatc 300 | | | ||||| ||||||| ||||| || || |||||||||||| |||| | |||| Sbjct: 84052 tcagagaaggcagggttcccctacaaaccattcgagctaaaattgatcattgttcctata 83993 Query: 301 caattcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaagaat 360 || ||||||| || ||||| ||||| || |||||||||||||||| ||||||||| ||| Sbjct: 83992 cagttcgaaccatatatggggtattgggcataaaaatttggatatttgtagacgaacaat 83933 Query: 361 aa 362 || Sbjct: 83932 aa 83931 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 500 tgctatgcttagtgtgtgactcgtt 524 ||||||||||||||||||||||||| Sbjct: 83783 tgctatgcttagtgtgtgactcgtt 83759
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 163 bits (82), Expect = 8e-37 Identities = 247/302 (81%) Strand = Plus / Minus Query: 61 aaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatagag 120 ||||||| |||| ||||| ||||| ||||||||||||||||| |||||||||||||||| Sbjct: 85220 aaccttacggacaacctaatattctcgcagaatatatagctttacaattaaaaaatagag 85161 Query: 121 tttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggg 180 | ||||| |||||||||||||||||||| |||||||||||| || || | | || || | Sbjct: 85160 tctcatttcgaaaggcaatgaaaaaagctattgaattaactgaacaaaccggtacaaaag 85101 Query: 181 gagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatcca 240 || | |||| ||||||| || ||| ||| |||||||| |||||||||| ||||| | Sbjct: 85100 gaattcaagtgcaaattgcaggacgtatcgacggaaaagagattgcacgtgtcgaatgga 85041 Query: 241 ttaaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgctatc 300 | | | ||||| ||||||| |||||||| ||||||||||||||| | || | | || Sbjct: 85040 tcagagaaggcagggttcccctacaaacaattcgcgctaaaattgatcactgttcccata 84981 Query: 301 caattcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaagaat 360 || || |||||||||||||| | |||||| | |||||||||||||| ||| || |||||| Sbjct: 84980 cagttagaactatctatggaatcttaggtatcaaaatttggatatttgtaaaccaagaat 84921 Query: 361 aa 362 || Sbjct: 84920 aa 84919 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 489 tttaatataattgctatgcttagtgtgtgactcgtta 525 |||| ||||||||||||||| |||||||||||||||| Sbjct: 84750 tttagtataattgctatgctcagtgtgtgactcgtta 84714 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 584 ataaccaacctattgcttcgtattg 608 ||||||||| ||||||||||||||| Sbjct: 84616 ataaccaacttattgcttcgtattg 84592
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 159 bits (80), Expect = 1e-35 Identities = 236/288 (81%) Strand = Plus / Minus Query: 75 cctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaag 134 ||||| ||||||||||||| ||||||| |||||||| |||||||||||||| ||||| Sbjct: 85776 cctaatattcttgcagaatttatagctggacaattaaagaatagagtttcatttcgaaaa 85717 Query: 135 gcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaaaa 194 ||||||||||| || ||||||||||| || ||||||||| || ||| | || || || Sbjct: 85716 gcaatgaaaaaggctattgaattaacagaacaagcagatacaaaaggaattcaaatacaa 85657 Query: 195 attgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggcaga 254 |||||||| ||| ||| ||||||||||||||||||| ||||| || | | || || Sbjct: 85656 attgcggggcgtatcgacggaaaagaaattgcacgtgtcgaatggatcagagaaggtagg 85597 Query: 255 cttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatc 314 ||||||| ||||| || || |||||||||||||||||| ||| || ||||||||||| Sbjct: 85596 gttcccctacaaacgattcgagctaaaattgattattgcgcttatacagttcgaactatc 85537 Query: 315 tatggagtattaggtgtaaaaatttggatattcgtagacgaagaataa 362 ||||||||||| || | |||||||||||||| ||||||| |||||| Sbjct: 85536 tatggagtattgggcatcaaaatttggatatttctagacgaggaataa 85489 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 487 catttaatataattgctatgcttagtgtgtgactc 521 ||||| ||||||||||||||||||||||||||||| Sbjct: 85359 catttgatataattgctatgcttagtgtgtgactc 85325
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 159 bits (80), Expect = 1e-35 Identities = 236/288 (81%) Strand = Plus / Minus Query: 75 cctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaag 134 ||||| ||||||||||||| ||||||| |||||||| |||||||||||||| ||||| Sbjct: 84654 cctaatattcttgcagaatttatagctggacaattaaagaatagagtttcatttcgaaaa 84595 Query: 135 gcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaaaa 194 ||||||||||| || ||||||||||| || |||| |||| || ||| | || || || Sbjct: 84594 gcaatgaaaaaggctattgaattaacagaacaagcggatacaaaaggaattcaaatacaa 84535 Query: 195 attgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggcaga 254 |||||||| ||| ||| ||||||||||||||||||| ||||| || | | ||||| Sbjct: 84534 attgcggggcgtatcgacggaaaagaaattgcacgtgtcgaatggatcagagaaggcagg 84475 Query: 255 cttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatc 314 ||||||| ||||| || || ||||||||||||||||||| ||| || ||||||||||| Sbjct: 84474 gttcccctacaaacgattcgagctaaaattgattattgctcttatacagttcgaactatc 84415 Query: 315 tatggagtattaggtgtaaaaatttggatattcgtagacgaagaataa 362 |||||| |||| || | |||||||||||||| ||||||| |||||| Sbjct: 84414 tatggaatattgggcatcaaaatttggatatttctagacgaggaataa 84367 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 487 catttaatataattgctatgcttagtgtgtgactcgtt 524 ||||| |||||||||||||||||||||||||||||||| Sbjct: 84239 catttgatataattgctatgcttagtgtgtgactcgtt 84202
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 159 bits (80), Expect = 1e-35 Identities = 236/288 (81%) Strand = Plus / Minus Query: 75 cctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaag 134 ||||| ||||||||||||| ||||||| |||||||| |||||||||||||| ||||| Sbjct: 84818 cctaatattcttgcagaatttatagctggacaattaaagaatagagtttcatttcgaaaa 84759 Query: 135 gcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaaaa 194 ||||||||||| || ||||||||||| || |||| |||| || ||| | || || || Sbjct: 84758 gcaatgaaaaaggctattgaattaacagaacaagcggatacaaaaggaattcaaatacaa 84699 Query: 195 attgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggcaga 254 |||||||| ||| ||| ||||||||||||||||||| ||||| || | | ||||| Sbjct: 84698 attgcggggcgtatcgacggaaaagaaattgcacgtgtcgaatggatcagagaaggcagg 84639 Query: 255 cttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatc 314 ||||||| ||||| || || ||||||||||||||||||| ||| || ||||||||||| Sbjct: 84638 gttcccctacaaacgattcgagctaaaattgattattgctcttatacagttcgaactatc 84579 Query: 315 tatggagtattaggtgtaaaaatttggatattcgtagacgaagaataa 362 |||||| |||| || | |||||||||||||| ||||||| |||||| Sbjct: 84578 tatggaatattgggcatcaaaatttggatatttctagacgaggaataa 84531 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Minus Query: 487 catttaatataattgctatgcttagtgtgtgactcgt 523 ||||| ||||||||||||||||||||||||||||||| Sbjct: 84386 catttgatataattgctatgcttagtgtgtgactcgt 84350
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 159 bits (80), Expect = 1e-35 Identities = 236/288 (81%) Strand = Plus / Minus Query: 75 cctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaag 134 ||||| ||||||||||||| ||||||| |||||||| |||||||||||||| ||||| Sbjct: 84815 cctaatattcttgcagaatttatagctggacaattaaagaatagagtttcatttcgaaaa 84756 Query: 135 gcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaaaa 194 ||||||||||| || ||||||||||| || |||| |||| || ||| | || || || Sbjct: 84755 gcaatgaaaaaggctattgaattaacagaacaagcggatacaaaaggaattcaaatacaa 84696 Query: 195 attgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggcaga 254 |||||||| ||| ||| ||||||||||||||||||| ||||| || | | ||||| Sbjct: 84695 attgcggggcgtatcgacggaaaagaaattgcacgtgtcgaatggatcagagaaggcagg 84636 Query: 255 cttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatc 314 ||||||| ||||| || || ||||||||||||||||||| ||| || ||||||||||| Sbjct: 84635 gttcccctacaaacgattcgagctaaaattgattattgctcttatacagttcgaactatc 84576 Query: 315 tatggagtattaggtgtaaaaatttggatattcgtagacgaagaataa 362 |||||| |||| || | |||||||||||||| ||||||| |||||| Sbjct: 84575 tatggaatattgggcatcaaaatttggatatttctagacgaggaataa 84528 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Minus Query: 487 catttaatataattgctatgcttagtgtgtgactcgt 523 ||||| ||||||||||||||||||||||||||||||| Sbjct: 84383 catttgatataattgctatgcttagtgtgtgactcgt 84347
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 159 bits (80), Expect = 1e-35 Identities = 236/288 (81%) Strand = Plus / Minus Query: 75 cctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaag 134 ||||| ||||||||||||| ||||||| |||||||| |||||||||||||| ||||| Sbjct: 84701 cctaatattcttgcagaatttatagctggacaattaaagaatagagtttcatttcgaaaa 84642 Query: 135 gcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaaaa 194 ||||||||||| || ||||||||||| || |||| |||| || ||| | || || || Sbjct: 84641 gcaatgaaaaaggctattgaattaacagaacaagcggatacaaaaggaattcaaatacaa 84582 Query: 195 attgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggcaga 254 |||||||| ||| ||| ||||||||||||||||||| ||||| || | | ||||| Sbjct: 84581 attgcggggcgtatcgacggaaaagaaattgcacgtgtcgaatggatcagagaaggcagg 84522 Query: 255 cttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatc 314 ||||||| ||||| || || ||||||||||||||||||| ||| || ||||||||||| Sbjct: 84521 gttcccctacaaacgattcgagctaaaattgattattgctcttatacagttcgaactatc 84462 Query: 315 tatggagtattaggtgtaaaaatttggatattcgtagacgaagaataa 362 |||||| |||| || | |||||||||||||| ||||||| |||||| Sbjct: 84461 tatggaatattgggcatcaaaatttggatatttctagacgaggaataa 84414 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 487 catttaatataattgctatgcttagtgtgtgactcgtt 524 ||||| |||||||||||||||||||||||||||||||| Sbjct: 84285 catttgatataattgctatgcttagtgtgtgactcgtt 84248
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 159 bits (80), Expect = 1e-35 Identities = 236/288 (81%) Strand = Plus / Minus Query: 75 cctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaag 134 ||||| ||||||||||||| ||||||| |||||||| |||||||||||||| ||||| Sbjct: 84666 cctaatattcttgcagaatttatagctggacaattaaagaatagagtttcatttcgaaaa 84607 Query: 135 gcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaaaa 194 ||||||||||| || ||||||||||| || |||| |||| || ||| | || || || Sbjct: 84606 gcaatgaaaaaggctattgaattaacagaacaagcggatacaaaaggaattcaaatacaa 84547 Query: 195 attgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggcaga 254 |||||||| ||| ||| ||||||||||||||||||| ||||| || | | ||||| Sbjct: 84546 attgcggggcgtatcgacggaaaagaaattgcacgtgtcgaatggatcagagaaggcagg 84487 Query: 255 cttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatc 314 ||||||| ||||| || || ||||||||||||||||||| ||| || ||||||||||| Sbjct: 84486 gttcccctacaaacgattcgagctaaaattgattattgctcttatacagttcgaactatc 84427 Query: 315 tatggagtattaggtgtaaaaatttggatattcgtagacgaagaataa 362 |||||| |||| || | |||||||||||||| ||||||| |||||| Sbjct: 84426 tatggaatattgggcatcaaaatttggatatttctagacgaggaataa 84379 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 487 catttaatataattgctatgcttagtgtgtgactcgtt 524 ||||| |||||||||||||||||||||||||||||||| Sbjct: 84251 catttgatataattgctatgcttagtgtgtgactcgtt 84214
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 155 bits (78), Expect = 2e-34 Identities = 246/302 (81%) Strand = Plus / Minus Query: 61 aaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatagag 120 |||||||| || | ||||| ||||||||||||| ||||||| |||||||| ||||||| Sbjct: 85543 aaccttatggaaaccctaatattcttgcagaatttatagctggacaattaaagaatagag 85484 Query: 121 tttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggg 180 |||| || ||||| ||||||||||| || ||||||||||| || ||||||||| || | Sbjct: 85483 tttcctttcgaaaagcaatgaaaaaggctattgaattaacagaacaagcagatacaaaag 85424 Query: 181 gagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatcca 240 || | || || |||||||||| ||| ||| ||||||||||||||||||| ||||| | Sbjct: 85423 gaattcaaatacaaattgcggggcgtatcgacggaaaagaaattgcacgtgtcgaatgga 85364 Query: 241 ttaaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgctatc 300 | | | || || ||||||| ||||| || || || |||||||||||||||| ||| Sbjct: 85363 tcagagaaggtagggttcccctacaaacgattcgagcgaaaattgattattgctcttata 85304 Query: 301 caattcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaagaat 360 || |||||||||||||||||||||| || | |||||||||||||| ||||||| |||| Sbjct: 85303 cagttcgaactatctatggagtattgggcatcaaaatttggatatttctagacgaggaat 85244 Query: 361 aa 362 || Sbjct: 85243 aa 85242 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 487 catttaatataattgctatgcttagtgtgtgactcgtt 524 ||||| |||||||||||||||||||||||||||||||| Sbjct: 85112 catttgatataattgctatgcttagtgtgtgactcgtt 85075
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 155 bits (78), Expect = 2e-34 Identities = 246/302 (81%) Strand = Plus / Minus Query: 61 aaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatagag 120 |||||||| || | ||||| ||||||||||||| ||||||| |||||||| ||||||| Sbjct: 85541 aaccttatggaaaccctaatattcttgcagaatttatagctggacaattaaagaatagag 85482 Query: 121 tttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggg 180 |||| || ||||| ||||||||||| || ||||||||||| || ||||||||| || | Sbjct: 85481 tttcctttcgaaaagcaatgaaaaaggctattgaattaacagaacaagcagatacaaaag 85422 Query: 181 gagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatcca 240 || | || || |||||||||| ||| ||| ||||||||||||||||||| ||||| | Sbjct: 85421 gaattcaaatacaaattgcggggcgtatcgacggaaaagaaattgcacgtgtcgaatgga 85362 Query: 241 ttaaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgctatc 300 | | | || || ||||||| ||||| || || || |||||||||||||||| ||| Sbjct: 85361 tcagagaaggtagggttcccctacaaacgattcgagcgaaaattgattattgctcttata 85302 Query: 301 caattcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaagaat 360 || |||||||||||||||||||||| || | |||||||||||||| ||||||| |||| Sbjct: 85301 cagttcgaactatctatggagtattgggcatcaaaatttggatatttctagacgaggaat 85242 Query: 361 aa 362 || Sbjct: 85241 aa 85240 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 487 catttaatataattgctatgcttagtgtgtgactcgtt 524 ||||| |||||||||||||||||||||||||||||||| Sbjct: 85110 catttgatataattgctatgcttagtgtgtgactcgtt 85073
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 151 bits (76), Expect = 3e-33 Identities = 235/288 (81%) Strand = Plus / Minus Query: 75 cctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaag 134 ||||| ||||||||||||| ||||||| ||||||||||||| | ||||| || ||||| Sbjct: 82216 cctaatattcttgcagaatttatagctggccaattaaaaaatcgcgtttcttttcgaaaa 82157 Query: 135 gcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaaaa 194 |||||||||||||| |||||||||||| || | || ||| || ||| | ||||| || Sbjct: 82156 gcaatgaaaaaagctattgaattaactgaacaggcgaatacaaaaggaattcaagtacaa 82097 Query: 195 attgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggcaga 254 ||||| || ||| ||| ||||||||||||||||||| |||| || | | |||||| Sbjct: 82096 attgcaggacgtatcgacggaaaagaaattgcacgtgttgaatggatcagagaaggcaga 82037 Query: 255 cttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatc 314 |||| | |||||||| ||||||||||||||||| | |||| || |||||||||| Sbjct: 82036 gttcctttacaaacaattgaagctaaaattgattattgttcctatacagttcgaactatt 81977 Query: 315 tatggagtattaggtgtaaaaatttggatattcgtagacgaagaataa 362 ||||| || ||||| |||||||||||||||||||||||||||||||| Sbjct: 81976 tatggggttttaggaataaaaatttggatattcgtagacgaagaataa 81929 Score = 63.9 bits (32), Expect = 6e-07 Identities = 32/32 (100%) Strand = Plus / Minus Query: 493 atataattgctatgcttagtgtgtgactcgtt 524 |||||||||||||||||||||||||||||||| Sbjct: 81758 atataattgctatgcttagtgtgtgactcgtt 81727
>gb|DQ069459.1| Nuphar advena ribosomal protein S3 (rps3) gene, partial cds; chloroplast Length = 654 Score = 143 bits (72), Expect = 8e-31 Identities = 222/272 (81%) Strand = Plus / Plus Query: 75 cctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaag 134 ||||| ||||||||||||||||| ||| | |||||||| ||||||||||| || |||||| Sbjct: 370 cctaatattcttgcagaatatatcgctctgcaattaaagaatagagtttcctttcgaaag 429 Query: 135 gcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaaaa 194 |||||||||||||| ||||||||| || || |||||||| || |||| | | ||| || Sbjct: 430 gcaatgaaaaaagctattgaattagctgaacaagcagatgcaaagggaattcaggtacaa 489 Query: 195 attgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggcaga 254 ||||| || |||||| ||||| |||||||| || | |||| |||| | ||| || Sbjct: 490 attgcaggacgtctcaacggaaacgaaattgcccgcgttgaatggattagagagggtagg 549 Query: 255 cttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatc 314 ||||||| || || || || | |||||||||| |||| | ||||||| ||||||||||| Sbjct: 550 gttcccctacagaccattcgagttaaaattgatcattgttcctatccagttcgaactatc 609 Query: 315 tatggagtattaggtgtaaaaatttggatatt 346 |||||||||||||| | |||||||||||||| Sbjct: 610 tatggagtattagggatcaaaatttggatatt 641
>gb|AF536225.1| Vigna angularis chloroplast S10B operon, partial sequence Length = 6550 Score = 141 bits (71), Expect = 3e-30 Identities = 230/283 (81%) Strand = Plus / Plus Query: 64 cttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatagagttt 123 |||||| ||| ||||| ||||||||||||| ||||||| |||||||| |||||||||| Sbjct: 3538 cttataaacaccctaatattcttgcagaatttatagctggacaattaaagaatagagttt 3597 Query: 124 cattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggag 183 |||| || || |||||||||||||| |||||||||||| || |||||| || || |||| Sbjct: 3598 catttcgtaaagcaatgaaaaaagctattgaattaactgaacaagcaggtacaaaaggag 3657 Query: 184 taaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccatta 243 | ||||| | ||||| || ||| | | ||||||||||||||||||| ||||| |||| Sbjct: 3658 ttcaagtacagattgcaggacgtattgatggaaaagaaattgcacgtgtcgaatggatta 3717 Query: 244 aaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaa 303 | || || |||| || ||||| || || ||||||||||| ||||| || ||| || Sbjct: 3718 gagaaggtagggttcctctacaaaccattcgagctaaaattgaatattgttgttatacag 3777 Query: 304 ttcgaactatctatggagtattaggtgtaaaaatttggatatt 346 |||||||||| |||||||| ||||| ||||| |||||||||| Sbjct: 3778 ttcgaactatttatggagttttagggataaaagtttggatatt 3820 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Plus Query: 498 attgctatgcttagtgtgtgactcgtta 525 ||||| |||||||||||||||||||||| Sbjct: 3988 attgccatgcttagtgtgtgactcgtta 4015
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 139 bits (70), Expect = 1e-29 Identities = 244/302 (80%) Strand = Plus / Minus Query: 61 aaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatagag 120 ||||||| |||| ||||| ||||||||||||| |||||| ||||||| ||||||| Sbjct: 87981 aaccttacggacatcctaatattcttgcagaatttatagccggacaattaaggaatagag 87922 Query: 121 tttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggg 180 |||| || || |||||||| |||||||| |||||||||||| || | ||||||| || | Sbjct: 87921 tttcgtttcgcaaggcaataaaaaaagctattgaattaactgaacaggcagatacaaaag 87862 Query: 181 gagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatcca 240 || | ||||| ||||||| || ||| ||| ||||||||||||||||||| |||| | Sbjct: 87861 gaattcaagtacaaattgcagggcgtatcgacggaaaagaaattgcacgtgttgaatgga 87802 Query: 241 ttaaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgctatc 300 ||| | || || ||||||| ||||| || || ||||||||||||||||| | |||| Sbjct: 87801 ttagagaaggaagggttcccctacaaaccattcgagctaaaattgattattgttcctata 87742 Query: 301 caattcgaactatctatggagtattaggtgtaaaaatttggatattcgtagacgaagaat 360 | |||||||||| ||||| |||||||| | |||||||||||||| |||||||| |||| Sbjct: 87741 gagttcgaactatatatggggtattaggcatcaaaatttggatatttgtagacgaggaat 87682 Query: 361 aa 362 || Sbjct: 87681 aa 87680 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 487 catttaatataattgctatgcttagtgtgtgactcgtt 524 ||||| |||||||||||||||||||||||||||||||| Sbjct: 87526 catttgatataattgctatgcttagtgtgtgactcgtt 87489
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 139 bits (70), Expect = 1e-29 Identities = 229/282 (81%) Strand = Plus / Minus Query: 81 attcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaaggcaatg 140 |||||||| |||||||||||||| ||| |||||||||||||||| || ||||| |||||| Sbjct: 82736 attcttgctgaatatatagctttacaactaaaaaatagagtttcgtttcgaaaagcaatg 82677 Query: 141 aaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaaaaattgcg 200 |||||||| |||||||| ||| || ||||||||| || ||| | || | |||| || Sbjct: 82676 aaaaaagctattgaattgactgaacaagcagatacaaaaggaattcaaattcaaatcgca 82617 Query: 201 ggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggcagacttccc 260 || ||| ||| ||||||||||||||||||| ||||| || | | || || ||||| Sbjct: 82616 ggacgtatcgatggaaaagaaattgcacgtgtcgaatggataagagaaggtagggttccc 82557 Query: 261 ctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatctatgga 320 || ||||| || || |||||||||||| |||| | | || | ||| |||||||||||| Sbjct: 82556 ctacaaaccattcgagctaaaattgatcattgtttccataaagttcaaactatctatggg 82497 Query: 321 gtattaggtgtaaaaatttggatattcgtagacgaagaataa 362 |||||||| |||||||||||||||| |||||||| |||||| Sbjct: 82496 gtattaggcataaaaatttggatatttgtagacgaggaataa 82455 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 500 tgctatgcttagtgtgtgactcgtta 525 |||||||||||||||||||||||||| Sbjct: 82298 tgctatgcttagtgtgtgactcgtta 82273 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 580 actaataaccaacctattgcttcgt 604 ||||||||||||| ||||||||||| Sbjct: 82207 actaataaccaacttattgcttcgt 82183
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 139 bits (70), Expect = 1e-29 Identities = 232/286 (81%) Strand = Plus / Minus Query: 61 aaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatagag 120 |||||||| || | ||||| ||||||||||||| ||||||| |||||||| ||||||| Sbjct: 85312 aaccttatggaaaccctaatattcttgcagaatttatagctggacaattaaagaatagag 85253 Query: 121 tttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggg 180 |||| || ||||| ||||||||||| || ||||||||||| || ||||||||| || | Sbjct: 85252 tttcctttcgaaaagcaatgaaaaaggctattgaattaacagaacaagcagatacaaaag 85193 Query: 181 gagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatcca 240 || | || || |||||||||| ||| ||| ||||||||||||||||||| |||| | Sbjct: 85192 gaattcaaatacaaattgcggggcgtatcgacggaaaagaaattgcacgtgttgaatgga 85133 Query: 241 ttaaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgctatc 300 | | | || || ||||||| ||||| || || || |||||||||||||||| ||| Sbjct: 85132 tcagagaaggtagggttcccctacaaacgattcgagcgaaaattgattattgctcttata 85073 Query: 301 caattcgaactatctatggagtattaggtgtaaaaatttggatatt 346 || |||||||||||||||||||||| || | |||||||||||||| Sbjct: 85072 cagttcgaactatctatggagtattgggcatcaaaatttggatatt 85027 Score = 63.9 bits (32), Expect = 6e-07 Identities = 32/32 (100%) Strand = Plus / Minus Query: 493 atataattgctatgcttagtgtgtgactcgtt 524 |||||||||||||||||||||||||||||||| Sbjct: 84875 atataattgctatgcttagtgtgtgactcgtt 84844
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 135 bits (68), Expect = 2e-28 Identities = 233/288 (80%) Strand = Plus / Minus Query: 75 cctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaag 134 ||||| ||||||||||||| ||| ||| |||||||||||| | ||||| || ||||| Sbjct: 83113 cctaatattcttgcagaatttatcgctggacaattaaaaaatcgcgtttcttttcgaaaa 83054 Query: 135 gcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaaaa 194 |||||||||||||| |||||||||||| || | || ||| || ||| | ||||| || Sbjct: 83053 gcaatgaaaaaagctattgaattaactgaacaggcgaatacaaaaggaattcaagtacaa 82994 Query: 195 attgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggcaga 254 ||||| || ||| ||| ||||||||||||||||||| |||| || | | |||||| Sbjct: 82993 attgcaggacgtatcgacggaaaagaaattgcacgtgttgaatggatcagagaaggcaga 82934 Query: 255 cttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatc 314 |||| | |||||||| ||||||||||||||||| | |||| || |||||||||| Sbjct: 82933 gttcctttacaaacaattgaagctaaaattgattattgttcctatacagttcgaactatt 82874 Query: 315 tatggagtattaggtgtaaaaatttggatattcgtagacgaagaataa 362 ||||| || ||||| |||||||||||||||||||||||||||||||| Sbjct: 82873 tatggggttttaggaataaaaatttggatattcgtagacgaagaataa 82826 Score = 63.9 bits (32), Expect = 6e-07 Identities = 32/32 (100%) Strand = Plus / Minus Query: 493 atataattgctatgcttagtgtgtgactcgtt 524 |||||||||||||||||||||||||||||||| Sbjct: 82663 atataattgctatgcttagtgtgtgactcgtt 82632
>gb|DQ069457.1| Acorus americanus ribosomal protein S3 (rps3) gene, partial cds; chloroplast Length = 654 Score = 133 bits (67), Expect = 7e-28 Identities = 223/275 (81%) Strand = Plus / Plus Query: 81 attcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaaggcaatg 140 |||||||| |||||||||||||| ||| |||||||||||||||| || ||||| |||||| Sbjct: 376 attcttgctgaatatatagctttacaactaaaaaatagagtttcgtttcgaaaagcaatg 435 Query: 141 aaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaaaaattgcg 200 |||||||| |||||||| ||| || ||||||||| || ||| | || | |||| || Sbjct: 436 aaaaaagctattgaattgactgaacaagcagatacaaaaggaattcaaattcaaatcgca 495 Query: 201 ggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggcagacttccc 260 || ||| ||| ||||||||||||||||||| ||||| || | | || || ||||| Sbjct: 496 ggacgtatcgatggaaaagaaattgcacgtgtcgaatggataagagaaggtagggttccc 555 Query: 261 ctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatctatgga 320 || ||||| || || |||||||||||| |||| | | || | ||| |||||||||||| Sbjct: 556 ctacaaaccattcgagctaaaattgatcattgtttccataaagttcaaactatctatggg 615 Query: 321 gtattaggtgtaaaaatttggatattcgtagacga 355 |||||||| |||||||||||||||| |||||||| Sbjct: 616 gtattaggcataaaaatttggatatttgtagacga 650
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 127 bits (64), Expect = 5e-26 Identities = 220/272 (80%) Strand = Plus / Minus Query: 75 cctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaag 134 ||||| ||||||||||||| |||||| ||||||||||||||||||||| || || || Sbjct: 82993 cctaatattcttgcagaatttatagcgggccaattaaaaaatagagtttcttttcgcaaa 82934 Query: 135 gcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaaaa 194 ||||||||||| || || ||||||||| || ||||||||| || ||| | |||| || Sbjct: 82933 gcaatgaaaaaggctatagaattaactgaacaagcagatacaaaaggaattcaagtgcaa 82874 Query: 195 attgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggcaga 254 ||||| || ||| ||| |||||||||||||| |||| |||| || | | ||| || Sbjct: 82873 attgcaggacgtatcgacggaaaagaaattgcgcgtgttgaatggatcagagaggggagg 82814 Query: 255 cttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatc 314 |||| || ||||| || || ||||||||||||||||| |||||| || ||||||| ||| Sbjct: 82813 gttccactacaaaccattcgagctaaaattgattattgttgctatacagttcgaacgatc 82754 Query: 315 tatggagtattaggtgtaaaaatttggatatt 346 ||||| |||||||| | |||||||||||||| Sbjct: 82753 tatggggtattaggcatcaaaatttggatatt 82722 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 484 aatcatttaatataattgctatgcttagtgtgtgactcgtt 524 |||| ||| ||| |||||||||||||||||||||||||||| Sbjct: 82571 aatcttttgataaaattgctatgcttagtgtgtgactcgtt 82531
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 127 bits (64), Expect = 5e-26 Identities = 220/272 (80%) Strand = Plus / Minus Query: 75 cctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaag 134 ||||| ||||||||||||| |||||| ||||||||||||||||||||| || || || Sbjct: 82991 cctaatattcttgcagaatttatagcgggccaattaaaaaatagagtttcttttcgcaaa 82932 Query: 135 gcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaaaa 194 ||||||||||| || || ||||||||| || ||||||||| || ||| | |||| || Sbjct: 82931 gcaatgaaaaaggctatagaattaactgaacaagcagatacaaaaggaattcaagtgcaa 82872 Query: 195 attgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggcaga 254 ||||| || ||| ||| |||||||||||||| |||| |||| || | | ||| || Sbjct: 82871 attgcaggacgtatcgacggaaaagaaattgcgcgtgttgaatggatcagagaggggagg 82812 Query: 255 cttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatc 314 |||| || ||||| || || ||||||||||||||||| |||||| || ||||||| ||| Sbjct: 82811 gttccactacaaaccattcgagctaaaattgattattgttgctatacagttcgaacgatc 82752 Query: 315 tatggagtattaggtgtaaaaatttggatatt 346 ||||| |||||||| | |||||||||||||| Sbjct: 82751 tatggggtattaggcatcaaaatttggatatt 82720 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 484 aatcatttaatataattgctatgcttagtgtgtgactcgtt 524 |||| ||| ||| |||||||||||||||||||||||||||| Sbjct: 82569 aatcttttgataaaattgctatgcttagtgtgtgactcgtt 82529
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 119 bits (60), Expect = 1e-23 Identities = 231/288 (80%) Strand = Plus / Minus Query: 75 cctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaag 134 ||||| ||||||||||||||||| ||| | ||||||||||||||||||||||| ||||| Sbjct: 89740 cctaatattcttgcagaatatattgctctgcaattaaaaaatagagtttcatttcgaaaa 89681 Query: 135 gcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaaaa 194 |||||||||||||| ||||||||| || || ||||| ||| || ||| | ||| || Sbjct: 89680 gcaatgaaaaaagctattgaattagctgaacaagcaaatacaaaggggattcgggtacaa 89621 Query: 195 attgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggcaga 254 |||||||| ||||| |||||||| ||||| |||| ||||| || | | ||||| Sbjct: 89620 attgcggggcgtctgaacggaaaagagattgcccgtgtcgaatggatcagagaaggcagg 89561 Query: 255 cttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatc 314 ||||||| || || || || ||||||||||||||||| | ||| ||| ||||||| Sbjct: 89560 gttcccctacacactattcgagctaaaattgattattgttcttatatggttcaaactatc 89501 Query: 315 tatggagtattaggtgtaaaaatttggatattcgtagacgaagaataa 362 || || |||||||| | |||||||||||||| ||||| ||||||||| Sbjct: 89500 tacggggtattagggatcaaaatttggatatttgtagatgaagaataa 89453 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Minus Query: 497 aattgctatgcttagtgtgtgactcgtt 524 |||||| ||||||||||||||||||||| Sbjct: 89328 aattgcaatgcttagtgtgtgactcgtt 89301 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 580 actaataaccaacctattgcttcgtatt 607 ||||||||||||| ||||||||||||| Sbjct: 89228 actaataaccaactcattgcttcgtatt 89201
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 119 bits (60), Expect = 1e-23 Identities = 219/272 (80%) Strand = Plus / Plus Query: 75 cctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaag 134 ||||| ||||||||||||| ||||||| |||||||| |||||| |||| || | || Sbjct: 42655 cctaatattcttgcagaatttatagctggacaattaaagaatagaatttcgtttaggaaa 42714 Query: 135 gcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaaaa 194 ||||| |||||||| ||||||||| || || | |||| || || ||||| ||||| || Sbjct: 42715 gcaatcaaaaaagctattgaattagctgaacaggcaggtacaaaaggagttcaagtacaa 42774 Query: 195 attgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggcaga 254 |||||||| ||| ||| ||||||||||||||||||| ||||| |||| | || || Sbjct: 42775 attgcgggacgtatcgacggaaaagaaattgcacgtgtcgaatggattagagaaggtagg 42834 Query: 255 cttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatc 314 |||| || ||||| || || ||||||||||||||||| | ||||||| |||||||||| Sbjct: 42835 gttcctctacaaaccattcgagctaaaattgattattgttcctatccagttcgaactatt 42894 Query: 315 tatggagtattaggtgtaaaaatttggatatt 346 ||||| |||||||| | ||| |||||||||| Sbjct: 42895 tatggggtattaggaatcaaagtttggatatt 42926 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 499 ttgctatgcttagtgtgtgactcgtt 524 |||||||||||||||||||||||||| Sbjct: 43076 ttgctatgcttagtgtgtgactcgtt 43101
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 119 bits (60), Expect = 1e-23 Identities = 219/272 (80%) Strand = Plus / Minus Query: 75 cctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaag 134 ||||| |||||||| |||| |||||| ||||||||| |||||||||||||| ||||| Sbjct: 84969 cctaatattcttgcggaatttatagccggccaattaaagaatagagtttcatttcgaaaa 84910 Query: 135 gcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaaaa 194 ||||||||||| || ||||||||||| || ||||||||| || ||| | ||||| || Sbjct: 84909 gcaatgaaaaaggctattgaattaaccgaacaagcagatacaaaaggaattcaagtacaa 84850 Query: 195 attgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggcaga 254 ||||| || ||| ||| |||||||||||||| |||| |||| || | | || || Sbjct: 84849 attgcagggcgtatcgacggaaaagaaattgcgcgtgtggaatggatcagagaaggtagg 84790 Query: 255 cttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatc 314 ||||||| ||||| || || |||||||| |||||||| | |||| | |||||||||| Sbjct: 84789 gttcccctgcaaaccattcgagctaaaatcgattattgttcctatactgttcgaactatt 84730 Query: 315 tatggagtattaggtgtaaaaatttggatatt 346 |||||||||||||| | |||||||||||||| Sbjct: 84729 tatggagtattaggcatcaaaatttggatatt 84698 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 487 catttaatataattgctatgcttagtgtgtgactcgtt 524 ||||| |||||||||||||||||||||||||||||||| Sbjct: 84543 catttgatataattgctatgcttagtgtgtgactcgtt 84506
>gb|DQ069460.1| Ranunculus macranthus ribosomal protein S3 (rps3) gene, partial cds; chloroplast Length = 651 Score = 115 bits (58), Expect = 2e-22 Identities = 229/286 (80%) Strand = Plus / Plus Query: 61 aaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatagag 120 |||||||| | || ||||| ||||||||||||| ||||||| |||||||| ||| ||| Sbjct: 353 aaccttatgggcaacctaatattcttgcagaatttatagctggacaattaaagaatcgag 412 Query: 121 tttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggg 180 ||||||| |||||||||||||||||||| |||||||||||| || | ||||||| || | Sbjct: 413 tttcatttcgaaaggcaatgaaaaaagctattgaattaactgaacaggcagatacaaaag 472 Query: 181 gagtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatcca 240 || | || || ||||||| || ||| | | ||||||||||| ||||||| ||||| | Sbjct: 473 gaattcaaatacaaattgcagggcgtattgacggaaaagaaatagcacgtgtcgaatgga 532 Query: 241 ttaaaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgctatc 300 | | | || || ||||||| ||||| || || || |||||||||||||| | ||| Sbjct: 533 tcagagaaggtagggttcccctacaaaccattcgagccaaaattgattattgttcttata 592 Query: 301 caattcgaactatctatggagtattaggtgtaaaaatttggatatt 346 || |||||||||| ||||| | |||||| | |||||||||||||| Sbjct: 593 cagttcgaactatttatggggcattaggaatcaaaatttggatatt 638
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 113 bits (57), Expect = 7e-22 Identities = 216/269 (80%) Strand = Plus / Minus Query: 75 cctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaag 134 ||||| ||||||||||||| |||||| |||||||||||||||||||| || || || Sbjct: 82462 cctaatattcttgcagaatttatagccggacaattaaaaaatagagtttcttttcgcaaa 82403 Query: 135 gcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaaaa 194 ||||||||||| || || ||||||||| || ||||||||| || ||| | |||| || Sbjct: 82402 gcaatgaaaaaggctatagaattaactgaacaagcagatacaaaaggaattcaagtgcaa 82343 Query: 195 attgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggcaga 254 ||||| || ||| ||| |||||||||||||| |||| |||| || | | ||| || Sbjct: 82342 attgcaggacgtatcgacggaaaagaaattgcgcgtgttgaatggatcagagagggtagg 82283 Query: 255 cttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatc 314 |||| || ||||| || |||||||||||||||||||| | |||| || ||||||| ||| Sbjct: 82282 gttccactacaaaccattcgcgctaaaattgattattgttcctatacagttcgaacaatc 82223 Query: 315 tatggagtattaggtgtaaaaatttggat 343 ||||| |||||||| | ||||||||||| Sbjct: 82222 tatggggtattaggcatcaaaatttggat 82194 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 497 aattgctatgcttagtgtgtgactcgtt 524 |||||||||||||||||||||||||||| Sbjct: 82017 aattgctatgcttagtgtgtgactcgtt 81990
>emb|Y00375.1|CHZMRP16 Maize chloroplast rpl16 gene for ribosomal protein L16 exon 1 Length = 548 Score = 113 bits (57), Expect = 7e-22 Identities = 66/69 (95%) Strand = Plus / Plus Query: 452 cctctttctataagatttaatgaaaattgataaatcatttaatataattgctatgcttag 511 |||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||| Sbjct: 102 cctctttctataagatttaatgaaaattaagaaatcttttaatataattgctatgcttag 161 Query: 512 tgtgtgact 520 ||||||||| Sbjct: 162 tgtgtgact 170 Score = 58.0 bits (29), Expect = 4e-05 Identities = 49/56 (87%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 ||||||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 207 cttagtaatgatagaaaatta------actaataaccaacctattgcttcgtattg 256
>gb|AF446051.1|AF446051S1 Hordeum vulgare Rpl16 (rpl16) gene, exon 1; chloroplast gene for chloroplast product Length = 282 Score = 111 bits (56), Expect = 3e-21 Identities = 56/56 (100%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 58 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 113 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 497 aattgctatgcttagtgtgtgactcgtta 525 ||||||||||||||||||||||||||||| Sbjct: 2 aattgctatgcttagtgtgtgactcgtta 30
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 103 bits (52), Expect = 7e-19 Identities = 73/80 (91%) Strand = Plus / Minus Query: 276 gctaaaattgattattgctgctatccaattcgaactatctatggagtattaggtgtaaaa 335 ||||||||||||||||| ||||||||| |||||||||||||||| ||||||| ||||| Sbjct: 85236 gctaaaattgattattgttgctatccagttcgaactatctatgggatattaggcataaaa 85177 Query: 336 atttggatattcgtagacga 355 ||||||||||| |||||||| Sbjct: 85176 atttggatatttgtagacga 85157 Score = 93.7 bits (47), Expect = 6e-16 Identities = 143/175 (81%) Strand = Plus / Minus Query: 63 ccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatagagtt 122 |||||| |||| ||||| ||||| ||||||| |||||| |||||||| ||||||||| Sbjct: 85449 ccttatggacaccctaatattctcgcagaatttatagccggacaattaaagaatagagtt 85390 Query: 123 tcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataagggga 182 ||||| || || |||||||||||||| |||||||||||| || | || | || || |||| Sbjct: 85389 tcatttcgcaaagcaatgaaaaaagctattgaattaactgaacaggcgggtacaaaggga 85330 Query: 183 gtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaat 237 | ||||| ||||||| || ||| | | ||||||||||||||||||| ||||| Sbjct: 85329 attcaagtacaaattgccggacgtatagacggaaaagaaattgcacgtgtcgaat 85275 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 484 aatcatttaatataattgctatgcttagtgtgtgactcgt 523 |||||||| | ||||||||||||||||||||| ||||||| Sbjct: 85029 aatcatttgagataattgctatgcttagtgtgcgactcgt 84990
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 103 bits (52), Expect = 7e-19 Identities = 76/84 (90%) Strand = Plus / Minus Query: 75 cctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaag 134 ||||| ||||||||||||||||| ||| | |||||||| ||||||||||| || |||||| Sbjct: 88763 cctaatattcttgcagaatatatcgctctgcaattaaagaatagagtttcctttcgaaag 88704 Query: 135 gcaatgaaaaaagccattgaatta 158 |||||||||||||| ||||||||| Sbjct: 88703 gcaatgaaaaaagctattgaatta 88680 Score = 89.7 bits (45), Expect = 1e-14 Identities = 63/69 (91%) Strand = Plus / Minus Query: 278 taaaattgattattgctgctatccaattcgaactatctatggagtattaggtgtaaaaat 337 |||||||||| |||| | ||||||| ||||||||||||||||||||||||| ||||||| Sbjct: 88560 taaaattgatcattgttcctatccagttcgaactatctatggagtattagggataaaaat 88501 Query: 338 ttggatatt 346 ||||||||| Sbjct: 88500 ttggatatt 88492 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 497 aattgctatgcttagtgtgtgactcgtt 524 |||||||||||||||||||||||||||| Sbjct: 88326 aattgctatgcttagtgtgtgactcgtt 88299
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 103 bits (52), Expect = 7e-19 Identities = 73/80 (91%) Strand = Plus / Minus Query: 276 gctaaaattgattattgctgctatccaattcgaactatctatggagtattaggtgtaaaa 335 ||||||||||||||||| ||||||||| |||||||||||||||| ||||||| ||||| Sbjct: 85465 gctaaaattgattattgttgctatccagttcgaactatctatgggatattaggcataaaa 85406 Query: 336 atttggatattcgtagacga 355 ||||||||||| |||||||| Sbjct: 85405 atttggatatttgtagacga 85386 Score = 93.7 bits (47), Expect = 6e-16 Identities = 143/175 (81%) Strand = Plus / Minus Query: 63 ccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatagagtt 122 |||||| |||| ||||| ||||| ||||||| |||||| |||||||| ||||||||| Sbjct: 85678 ccttatggacaccctaatattctcgcagaatttatagccggacaattaaagaatagagtt 85619 Query: 123 tcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataagggga 182 ||||| || || |||||||||||||| |||||||||||| || | || | || || |||| Sbjct: 85618 tcatttcgcaaagcaatgaaaaaagctattgaattaactgaacaggcgggtacaaaggga 85559 Query: 183 gtaaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaat 237 | ||||| ||||||| || ||| | | ||||||||||||||||||| ||||| Sbjct: 85558 attcaagtacaaattgccggacgtatagacggaaaagaaattgcacgtgtcgaat 85504 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 484 aatcatttaatataattgctatgcttagtgtgtgactcgt 523 |||||||| | ||||||||||||||||||||| ||||||| Sbjct: 85258 aatcatttgagataattgctatgcttagtgtgcgactcgt 85219
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 101 bits (51), Expect = 3e-18 Identities = 225/283 (79%) Strand = Plus / Minus Query: 64 cttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatagagttt 123 |||||| ||| ||||| ||| ||||||||| ||||||| |||||||| |||||||||| Sbjct: 82246 cttataaacaccctaatattattgcagaatttatagctggacaattaaagaatagagttt 82187 Query: 124 cattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggag 183 | || || || |||||||||||||| |||||||||||| || | || | || || |||| Sbjct: 82186 cgtttcgtaaagcaatgaaaaaagctattgaattaactgaacaggcgggtacaaaaggag 82127 Query: 184 taaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccatta 243 | ||||| ||||||| || ||| ||| ||||||||||||||||||| |||| || | Sbjct: 82126 ttcaagtacaaattgcaggacgtatcgacggaaaagaaattgcacgtgttgaatggatca 82067 Query: 244 aaaggggcagacttcccctccaaacaatccgcgctaaaattgattattgctgctatccaa 303 | || ||| |||| || ||||| || || || ||||| |||||||| |||||| || Sbjct: 82066 gagaaggtagagttcctctacaaaccattcgagcgaaaatagattattgttgctatacag 82007 Query: 304 ttcgaactatctatggagtattaggtgtaaaaatttggatatt 346 |||||||||| ||||| || ||||| | ||| |||||||||| Sbjct: 82006 ttcgaactatttatggggttttagggatcaaagtttggatatt 81964 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Minus Query: 498 attgctatgcttagtgtgtgactcgtta 525 |||||||||||||||||| ||||||||| Sbjct: 81780 attgctatgcttagtgtgcgactcgtta 81753
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 87.7 bits (44), Expect = 4e-14 Identities = 215/272 (79%) Strand = Plus / Minus Query: 75 cctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaag 134 ||||| ||||||||||||| |||||| || ||||| |||||||||||||| || || Sbjct: 87829 cctaatattcttgcagaatttatagccggacagttaaagaatagagtttcatttcgcaaa 87770 Query: 135 gcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaaaa 194 ||||| ||||| || ||||||||||| || | ||||||| || ||| | ||||| || Sbjct: 87769 gcaataaaaaaggctattgaattaaccgaacaggcagatacaaaaggaattcaagtacaa 87710 Query: 195 attgcgggtcgtctcggaggaaaagaaattgcacgtgccgaatccattaaaaggggcaga 254 ||||| ||||| || | ||||||||||||||||||| ||||| || | | || || Sbjct: 87709 attgcaggtcgcctggacggaaaagaaattgcacgtgtcgaatggatgagagaaggtagg 87650 Query: 255 cttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatc 314 |||| || ||||| || || ||||||||||||||||| | |||| | | ||||| || Sbjct: 87649 gttcctctacaaaccattcgagctaaaattgattattgttcctatggagtccgaacggtc 87590 Query: 315 tatggagtattaggtgtaaaaatttggatatt 346 |||||||||||||| | |||||||||||||| Sbjct: 87589 tatggagtattaggcatcaaaatttggatatt 87558 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 488 atttaatataattgctatgcttagtgtgtgactcgtt 524 |||| ||||||||||||||||||||||| |||||||| Sbjct: 87403 atttcatataattgctatgcttagtgtgcgactcgtt 87367
>emb|AJ560717.1|OMI560717 Orobanche minor chloroplast rps19 gene (partial), rpl22 gene and rps3 gene (partial) Length = 1121 Score = 83.8 bits (42), Expect = 6e-13 Identities = 93/110 (84%) Strand = Plus / Plus Query: 61 aaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatagag 120 ||||||||||| | || || ||| ||||||||| |||||| ||||||||| ||||||| Sbjct: 980 aaccttatagaaaccccaatattattgcagaatttatagccaaccaattaaataatagag 1039 Query: 121 tttcattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagca 170 ||||||| |||| ||||||||||| || |||||||||||| || ||||| Sbjct: 1040 tttcatttagaaaagcaatgaaaaaggctattgaattaactgaacaagca 1089
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 83.8 bits (42), Expect = 6e-13 Identities = 135/166 (81%) Strand = Plus / Minus Query: 64 cttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatagagttt 123 |||||||| | ||||| ||||||||||||| ||||| ||||||||||||||||||| Sbjct: 80984 cttatagagatcctaatattcttgcagaattcatagccggacaattaaaaaatagagttt 80925 Query: 124 cattccgaaaggcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggag 183 | || || || |||||||||||||| ||||| |||||| || | || | | || |||| Sbjct: 80924 cgtttcgtaaagcaatgaaaaaagctattgagttaactgaacaggcggggacaaaaggag 80865 Query: 184 taaaagtaaaaattgcgggtcgtctcggaggaaaagaaattgcacg 229 | ||||| |||||||||| ||| ||| ||||||||||||||||| Sbjct: 80864 ttcaagtacaaattgcgggacgtatcgacggaaaagaaattgcacg 80819 Score = 69.9 bits (35), Expect = 9e-09 Identities = 77/91 (84%) Strand = Plus / Minus Query: 256 ttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatct 315 ||||||| ||||| || || ||||||||||||||||| | |||| || |||||||||| | Sbjct: 80792 ttcccctacaaaccattcgagctaaaattgattattgttcctatacagttcgaactattt 80733 Query: 316 atggagtattaggtgtaaaaatttggatatt 346 |||| |||||||| | ||| |||||||||| Sbjct: 80732 atggcgtattagggatcaaagtttggatatt 80702 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Minus Query: 497 aattgctatgcttagtgtgtgactcgtt 524 ||||||||||||||||||| |||||||| Sbjct: 80571 aattgctatgcttagtgtgcgactcgtt 80544
>gb|M81884.1|EPFCPCG Epifagus virginiana chloroplast, complete genome Length = 70028 Score = 79.8 bits (40), Expect = 1e-11 Identities = 85/100 (85%) Strand = Plus / Minus Query: 61 aaccttatagacagcctaacattcttgcagaatatatagctttccaattaaaaaatagag 120 ||||||||||| | ||||| ||||||||||||| |||||| |||||||| ||||||| Sbjct: 19120 aaccttatagaaaccctaatattcttgcagaatttatagccgatcaattaaagaatagag 19061 Query: 121 tttcattccgaaaggcaatgaaaaaagccattgaattaac 160 |||| || |||| ||||||||||||| ||||||||||| Sbjct: 19060 tttcttttagaaaaacaatgaaaaaagctattgaattaac 19021 Score = 60.0 bits (30), Expect = 9e-06 Identities = 33/34 (97%) Strand = Plus / Minus Query: 491 taatataattgctatgcttagtgtgtgactcgtt 524 |||| ||||||||||||||||||||||||||||| Sbjct: 18669 taatttaattgctatgcttagtgtgtgactcgtt 18636
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 77.8 bits (39), Expect = 4e-11 Identities = 75/87 (86%) Strand = Plus / Minus Query: 75 cctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaag 134 ||||| |||||||| |||| |||||| |||||||| ||| |||||||||| |||||| Sbjct: 87582 cctaatattcttgccgaatttatagccggacaattaaagaatcgagtttcatttcgaaag 87523 Query: 135 gcaatgaaaaaagccattgaattaact 161 ||||||||||| || |||||||||||| Sbjct: 87522 gcaatgaaaaaggctattgaattaact 87496 Score = 71.9 bits (36), Expect = 2e-09 Identities = 72/84 (85%) Strand = Plus / Minus Query: 279 aaaattgattattgctgctatccaattcgaactatctatggagtattaggtgtaaaaatt 338 |||||||| ||||||| ||| | |||||||||||||||| |||||||| | |||||| Sbjct: 87378 aaaattgagtattgctcttatagagttcgaactatctatggggtattaggaatcaaaatt 87319 Query: 339 tggatattcgtagacgaagaataa 362 |||||||| |||||||||||||| Sbjct: 87318 tggatatttatagacgaagaataa 87295 Score = 65.9 bits (33), Expect = 1e-07 Identities = 61/69 (88%), Gaps = 1/69 (1%) Strand = Plus / Minus Query: 457 ttctataagatttaatgaaaatt-gataaatcatttaatataattgctatgcttagtgtg 515 ||||||||| || ||| |||||| ||| ||||||| ||||||||||||||||||||||| Sbjct: 87183 ttctataaggttaaataaaaatttgattgatcatttgatataattgctatgcttagtgtg 87124 Query: 516 tgactcgtt 524 |||||||| Sbjct: 87123 cgactcgtt 87115
>gb|AY775230.1| Heterosmilax japonica voucher Fu010807 rpl16 gene, intron; chloroplast Length = 1182 Score = 75.8 bits (38), Expect = 2e-10 Identities = 38/38 (100%) Strand = Plus / Minus Query: 488 atttaatataattgctatgcttagtgtgtgactcgtta 525 |||||||||||||||||||||||||||||||||||||| Sbjct: 1010 atttaatataattgctatgcttagtgtgtgactcgtta 973 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||| ||||||||||||||| Sbjct: 894 actaataaccaacttattgcttcgtattg 866
>gb|AY775229.1| Smilax tsinchengshanensis voucher Fu20013 rpl16 gene, intron; chloroplast Length = 1175 Score = 75.8 bits (38), Expect = 2e-10 Identities = 38/38 (100%) Strand = Plus / Minus Query: 488 atttaatataattgctatgcttagtgtgtgactcgtta 525 |||||||||||||||||||||||||||||||||||||| Sbjct: 1004 atttaatataattgctatgcttagtgtgtgactcgtta 967 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||| | ||||||||||||||| Sbjct: 887 actaataaccaccttattgcttcgtattg 859
>gb|AY775228.1| Smilax biltmoreana voucher NY83199 rpl16 gene, intron; chloroplast Length = 1147 Score = 75.8 bits (38), Expect = 2e-10 Identities = 38/38 (100%) Strand = Plus / Minus Query: 488 atttaatataattgctatgcttagtgtgtgactcgtta 525 |||||||||||||||||||||||||||||||||||||| Sbjct: 976 atttaatataattgctatgcttagtgtgtgactcgtta 939 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||| ||||||||||||||| Sbjct: 861 actaataaccaacttattgcttcgtattg 833
>gb|AY775227.1| Smilax herbacea voucher NYKC9967 rpl16 gene, intron; chloroplast Length = 1167 Score = 75.8 bits (38), Expect = 2e-10 Identities = 38/38 (100%) Strand = Plus / Minus Query: 488 atttaatataattgctatgcttagtgtgtgactcgtta 525 |||||||||||||||||||||||||||||||||||||| Sbjct: 995 atttaatataattgctatgcttagtgtgtgactcgtta 958 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||| ||||||||||||||| Sbjct: 880 actaataaccaacttattgcttcgtattg 852
>gb|AY775223.1| Smilax riparia var. acuminata voucher Fu92105 rpl16 gene, intron; chloroplast Length = 1140 Score = 75.8 bits (38), Expect = 2e-10 Identities = 38/38 (100%) Strand = Plus / Minus Query: 488 atttaatataattgctatgcttagtgtgtgactcgtta 525 |||||||||||||||||||||||||||||||||||||| Sbjct: 965 atttaatataattgctatgcttagtgtgtgactcgtta 928 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||| ||||||||||||||| Sbjct: 850 actaataaccaacttattgcttcgtattg 822
>gb|AY775221.1| Smilax riparia voucher Fu99914 rpl16 gene, intron; chloroplast Length = 1170 Score = 75.8 bits (38), Expect = 2e-10 Identities = 38/38 (100%) Strand = Plus / Minus Query: 488 atttaatataattgctatgcttagtgtgtgactcgtta 525 |||||||||||||||||||||||||||||||||||||| Sbjct: 999 atttaatataattgctatgcttagtgtgtgactcgtta 962
>gb|AY775219.1| Smilax riparia voucher Fu99902 rpl16 gene, intron; chloroplast Length = 1183 Score = 75.8 bits (38), Expect = 2e-10 Identities = 38/38 (100%) Strand = Plus / Minus Query: 488 atttaatataattgctatgcttagtgtgtgactcgtta 525 |||||||||||||||||||||||||||||||||||||| Sbjct: 1012 atttaatataattgctatgcttagtgtgtgactcgtta 975 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||| ||||||||||||||| Sbjct: 897 actaataaccaacttattgcttcgtattg 869
>gb|AY775217.1| Smilax riparia voucher Fu912691 rpl16 gene, intron; chloroplast Length = 1158 Score = 75.8 bits (38), Expect = 2e-10 Identities = 38/38 (100%) Strand = Plus / Minus Query: 488 atttaatataattgctatgcttagtgtgtgactcgtta 525 |||||||||||||||||||||||||||||||||||||| Sbjct: 986 atttaatataattgctatgcttagtgtgtgactcgtta 949 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||| ||||||||||||||| Sbjct: 871 actaataaccaacttattgcttcgtattg 843
>gb|AY775216.1| Smilax riparia voucher Fu96001 rpl16 gene, intron; chloroplast Length = 1129 Score = 75.8 bits (38), Expect = 2e-10 Identities = 38/38 (100%) Strand = Plus / Minus Query: 488 atttaatataattgctatgcttagtgtgtgactcgtta 525 |||||||||||||||||||||||||||||||||||||| Sbjct: 959 atttaatataattgctatgcttagtgtgtgactcgtta 922 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||| ||||||||||||||| Sbjct: 842 actaataaccaacttattgcttcgtattg 814
>gb|AY775215.1| Smilax riparia voucher Fu91091 rpl16 gene, intron; chloroplast Length = 1150 Score = 75.8 bits (38), Expect = 2e-10 Identities = 38/38 (100%) Strand = Plus / Minus Query: 488 atttaatataattgctatgcttagtgtgtgactcgtta 525 |||||||||||||||||||||||||||||||||||||| Sbjct: 984 atttaatataattgctatgcttagtgtgtgactcgtta 947 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||| ||||||||||||||| Sbjct: 863 actaataaccaacttattgcttcgtattg 835
>gb|AY775214.1| Smilax riparia voucher Fu010880 rpl16 gene, intron; chloroplast Length = 1134 Score = 75.8 bits (38), Expect = 2e-10 Identities = 38/38 (100%) Strand = Plus / Minus Query: 488 atttaatataattgctatgcttagtgtgtgactcgtta 525 |||||||||||||||||||||||||||||||||||||| Sbjct: 963 atttaatataattgctatgcttagtgtgtgactcgtta 926 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||| ||||||||||||||| Sbjct: 841 actaataaccaacttattgcttcgtattg 813
>gb|AY775224.1| Smilax riparia var. acuminata voucher Li00726 rpl16 gene, intron; chloroplast Length = 1149 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 486 tcatttaatataattgctatgcttagtgtgtgactcgtta 525 |||||||||||||||||||||||||||||||||| ||||| Sbjct: 980 tcatttaatataattgctatgcttagtgtgtgacccgtta 941 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||| ||||||||||||||| Sbjct: 858 actaataaccaacttattgcttcgtattg 830
>gb|AC153125.10| Medicago truncatula clone mth2-74f16, complete sequence Length = 128458 Score = 69.9 bits (35), Expect = 9e-09 Identities = 131/163 (80%) Strand = Plus / Minus Query: 75 cctaacattcttgcagaatatatagctttccaattaaaaaatagagtttcattccgaaag 134 ||||| ||||||||||||| ||||||| |||||||| |||||| ||||||| | || Sbjct: 26310 cctaatattcttgcagaatttatagctggacaattaaagaatagaatttcatttaggaaa 26251 Query: 135 gcaatgaaaaaagccattgaattaactaaaaaagcagatataaggggagtaaaagtaaaa 194 ||||| |||||||| ||||||||| || || | || || || ||||| ||||| || Sbjct: 26250 gcaatcaaaaaagctattgaattagctgaacagacatgtacaaaaggagttcaagtacaa 26191 Query: 195 attgcgggtcgtctcggaggaaaagaaattgcacgtgccgaat 237 |||||||| ||| ||| ||||||||||||||| ||| ||||| Sbjct: 26190 attgcgggacgtatcgacggaaaagaaattgcatgtgtcgaat 26148
>gb|AY775220.1| Smilax riparia voucher Fu99909 rpl16 gene, intron; chloroplast Length = 1181 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 488 atttaatataattgctatgcttagtgtgtgactcgtta 525 |||||| ||||||||||||||||||||||||||||||| Sbjct: 1009 atttaagataattgctatgcttagtgtgtgactcgtta 972 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||| ||||||||||||||| Sbjct: 886 actaataaccaacttattgcttcgtattg 858
>gb|AY540609.1| Sedum palmeri ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1369 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 487 catttaatataattgctatgcttagtgtgtgactcgtt 524 ||||| |||||||||||||||||||||||||||||||| Sbjct: 1196 catttgatataattgctatgcttagtgtgtgactcgtt 1159 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Minus Query: 333 aaaatttggatattcgtagacgaagaataa 362 |||||||||||||| |||||||||| |||| Sbjct: 1361 aaaatttggatattagtagacgaagtataa 1332
>gb|AY540608.1| Sedum corynephyllum ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1369 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 487 catttaatataattgctatgcttagtgtgtgactcgtt 524 ||||| |||||||||||||||||||||||||||||||| Sbjct: 1195 catttgatataattgctatgcttagtgtgtgactcgtt 1158 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Minus Query: 333 aaaatttggatattcgtagacgaagaataa 362 |||||||||||||| |||||||||| |||| Sbjct: 1360 aaaatttggatatttgtagacgaagtataa 1331
>gb|AY540607.1| Sedum clavatum ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1362 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 487 catttaatataattgctatgcttagtgtgtgactcgtt 524 ||||| |||||||||||||||||||||||||||||||| Sbjct: 1194 catttgatataattgctatgcttagtgtgtgactcgtt 1157 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Minus Query: 333 aaaatttggatattcgtagacgaagaataa 362 |||||||||||||| |||||||||| |||| Sbjct: 1353 aaaatttggatatttgtagacgaagtataa 1324
>gb|AY540606.1| Pachyphytum viride ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1373 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 487 catttaatataattgctatgcttagtgtgtgactcgtt 524 ||||| |||||||||||||||||||||||||||||||| Sbjct: 1199 catttgatataattgctatgcttagtgtgtgactcgtt 1162 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Minus Query: 333 aaaatttggatattcgtagacgaagaataa 362 |||||||||||||| |||||||||| |||| Sbjct: 1364 aaaatttggatatttgtagacgaagtataa 1335
>gb|AY540605.1| Graptopetalum superbum ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1365 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 487 catttaatataattgctatgcttagtgtgtgactcgtt 524 ||||| |||||||||||||||||||||||||||||||| Sbjct: 1191 catttgatataattgctatgcttagtgtgtgactcgtt 1154 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Minus Query: 333 aaaatttggatattcgtagacgaagaataa 362 |||||||||||||| |||||||||| |||| Sbjct: 1356 aaaatttggatatttgtagacgaagtataa 1327
>gb|AY540604.1| Graptopetalum suaveolens ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1130 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 487 catttaatataattgctatgcttagtgtgtgactcgtt 524 ||||| |||||||||||||||||||||||||||||||| Sbjct: 956 catttgatataattgctatgcttagtgtgtgactcgtt 919 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Minus Query: 333 aaaatttggatattcgtagacgaagaataa 362 |||||||||||||| |||||||||| |||| Sbjct: 1121 aaaatttggatatttgtagacgaagtataa 1092
>gb|AY540603.1| Graptopetalum saxifragoides ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1373 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 487 catttaatataattgctatgcttagtgtgtgactcgtt 524 ||||| |||||||||||||||||||||||||||||||| Sbjct: 1199 catttgatataattgctatgcttagtgtgtgactcgtt 1162 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Minus Query: 333 aaaatttggatattcgtagacgaagaataa 362 |||||||||||||| |||||||||| |||| Sbjct: 1364 aaaatttggatatttgtagacgaagtataa 1335
>gb|AY540599.1| Graptopetalum paraguayense ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1205 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 487 catttaatataattgctatgcttagtgtgtgactcgtt 524 ||||| |||||||||||||||||||||||||||||||| Sbjct: 1030 catttgatataattgctatgcttagtgtgtgactcgtt 993 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Minus Query: 333 aaaatttggatattcgtagacgaagaataa 362 |||||||||||||| |||||||||| |||| Sbjct: 1195 aaaatttggatatttgtagacgaagtataa 1166
>gb|AY540598.1| Graptopetalum pachyphyllum ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1378 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 487 catttaatataattgctatgcttagtgtgtgactcgtt 524 ||||| |||||||||||||||||||||||||||||||| Sbjct: 1204 catttgatataattgctatgcttagtgtgtgactcgtt 1167 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Minus Query: 333 aaaatttggatattcgtagacgaagaataa 362 |||||||||||||| |||||||||| |||| Sbjct: 1369 aaaatttggatatttgtagacgaagtataa 1340
>gb|AY540597.1| Graptopetalum mendozae ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1363 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 487 catttaatataattgctatgcttagtgtgtgactcgtt 524 ||||| |||||||||||||||||||||||||||||||| Sbjct: 1189 catttgatataattgctatgcttagtgtgtgactcgtt 1152 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Minus Query: 333 aaaatttggatattcgtagacgaagaataa 362 |||||||||||||| |||||||||| |||| Sbjct: 1354 aaaatttggatatttgtagacgaagtataa 1325
>gb|AY540596.1| Graptopetalum marginatum ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1368 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 487 catttaatataattgctatgcttagtgtgtgactcgtt 524 ||||| |||||||||||||||||||||||||||||||| Sbjct: 1200 catttgatataattgctatgcttagtgtgtgactcgtt 1163 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Minus Query: 333 aaaatttggatattcgtagacgaagaataa 362 |||||||||||||| |||||||||| |||| Sbjct: 1359 aaaatttggatatttgtagacgaagtataa 1330
>gb|AY540593.1| Graptopetalum glassii ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1360 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 487 catttaatataattgctatgcttagtgtgtgactcgtt 524 ||||| |||||||||||||||||||||||||||||||| Sbjct: 1186 catttgatataattgctatgcttagtgtgtgactcgtt 1149 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Minus Query: 333 aaaatttggatattcgtagacgaagaataa 362 |||||||||||||| |||||||||| |||| Sbjct: 1351 aaaatttggatatttgtagacgaagtataa 1322
>gb|AY540592.1| Graptopetalum fruticosum ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1361 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 487 catttaatataattgctatgcttagtgtgtgactcgtt 524 ||||| |||||||||||||||||||||||||||||||| Sbjct: 1188 catttgatataattgctatgcttagtgtgtgactcgtt 1151 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Minus Query: 333 aaaatttggatattcgtagacgaagaataa 362 |||||||||||||| |||||||||| |||| Sbjct: 1353 aaaatttggatatttgtagacgaagtataa 1324
>gb|AY540591.1| Graptopetalum filiferum ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1219 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 487 catttaatataattgctatgcttagtgtgtgactcgtt 524 ||||| |||||||||||||||||||||||||||||||| Sbjct: 1045 catttgatataattgctatgcttagtgtgtgactcgtt 1008
>gb|AY540590.1| Graptopetalum craigii ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1364 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 487 catttaatataattgctatgcttagtgtgtgactcgtt 524 ||||| |||||||||||||||||||||||||||||||| Sbjct: 1190 catttgatataattgctatgcttagtgtgtgactcgtt 1153 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Minus Query: 333 aaaatttggatattcgtagacgaagaataa 362 |||||||||||||| |||||||||| |||| Sbjct: 1355 aaaatttggatatttgtagacgaagtataa 1326
>gb|AY540589.1| Graptopetalum bernalense ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1363 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 487 catttaatataattgctatgcttagtgtgtgactcgtt 524 ||||| |||||||||||||||||||||||||||||||| Sbjct: 1190 catttgatataattgctatgcttagtgtgtgactcgtt 1153 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Minus Query: 333 aaaatttggatattcgtagacgaagaataa 362 |||||||||||||| |||||||||| |||| Sbjct: 1355 aaaatttggatatttgtagacgaagtataa 1326
>gb|AY540588.1| Graptopetalum bartramii ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1123 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 487 catttaatataattgctatgcttagtgtgtgactcgtt 524 ||||| |||||||||||||||||||||||||||||||| Sbjct: 949 catttgatataattgctatgcttagtgtgtgactcgtt 912 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Minus Query: 333 aaaatttggatattcgtagacgaagaataa 362 |||||||||||||| |||||||||| |||| Sbjct: 1114 aaaatttggatatttgtagacgaagtataa 1085
>gb|AY540587.1| Graptopetalum amethystinum ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1361 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 487 catttaatataattgctatgcttagtgtgtgactcgtt 524 ||||| |||||||||||||||||||||||||||||||| Sbjct: 1187 catttgatataattgctatgcttagtgtgtgactcgtt 1150 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Minus Query: 333 aaaatttggatattcgtagacgaagaataa 362 |||||||||||||| |||||||||| |||| Sbjct: 1352 aaaatttggatatttgtagacgaagtataa 1323
>gb|AY540582.1| Cremnophila linguifolia ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1369 Score = 67.9 bits (34), Expect = 4e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 487 catttaatataattgctatgcttagtgtgtgactcgtt 524 ||||| |||||||||||||||||||||||||||||||| Sbjct: 1196 catttgatataattgctatgcttagtgtgtgactcgtt 1159 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 334 aaatttggatattcgtagacgaagaataa 362 ||||||||||||| |||||||||| |||| Sbjct: 1360 aaatttggatatttgtagacgaagtataa 1332
>gb|AY847095.1| Megastachya mucronata ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1154 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 62 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 111
>gb|AY847093.1| Thysanolaena latifolia ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1182 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 65 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 114
>gb|AY847091.1| Gynerium sagittatum ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1184 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 59 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 108
>gb|AY847081.1| Phragmites australis ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1166 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 57 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 106
>gb|AY847080.1| Sporobolus indicus ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1023 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 49 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 98
>gb|AY847074.1| Merxmuellera macowanii ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1077 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 58 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 107
>gb|AY847073.1| Danthonia spicata ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1114 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 20 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 69
>gb|AY847071.1| Glyceria striata ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1142 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 14 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 63
>gb|DQ113934.1| Calamagrostis breweri isolate X17 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Minus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 795 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 746
>gb|DQ113933.1| Calamagrostis breweri isolate RMP0198 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Minus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 795 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 746
>gb|DQ113932.1| Calamagrostis breweri isolate BW8259 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Minus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 795 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 746
>gb|DQ113931.1| Calamagrostis breweri isolate RMP0007 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Minus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 795 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 746
>gb|DQ113930.1| Calamagrostis muiriana isolate B4 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Minus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 795 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 746
>gb|DQ113929.1| Calamagrostis muiriana isolate B3 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Minus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 795 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 746
>gb|DQ113928.1| Calamagrostis muiriana isolate B1 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Minus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 795 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 746
>gb|DQ113927.1| Calamagrostis muiriana isolate A7 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Minus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 795 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 746
>gb|DQ113926.1| Calamagrostis muiriana isolate A1 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Minus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 795 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 746
>gb|AY912215.1| Temochloa liliana ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1149 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 53 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 102
>gb|AY912210.1| Nastus productus ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1067 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 62 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 111
>gb|AY912208.1| Nastus elegantissimus ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1224 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 67 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 116
>gb|AY912205.1| Greslania rivularis ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1228 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 74 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 123
>gb|AY912204.1| Greslania circinata ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1170 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 91 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 140
>gb|AY912200.1| Schizostachyum brachycladum ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1227 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 67 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 116
>gb|AY912195.1| Chusquea culeou ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1181 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 65 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 114
>gb|AY912193.1| Oxytenanthera abyssinica ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1222 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 69 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 118
>gb|AY912192.1| Bambusa vulgaris ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1227 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 74 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 123
>gb|AY912190.1| Atractantha radiata ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1175 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 69 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 118
>gb|AY912189.1| Arthrostylidium ecuadorense ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1224 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 66 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 115
>gb|AF133487.1|AF133487 Puelia olyriformis ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1217 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 85 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 134
>gb|AF133486.1|AF133486 Molinia caerulea ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1211 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 84 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 133
>gb|AF133485.1|AF133485 Arundo donax ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1207 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 91 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 140
>gb|AF133484.1|AF133484 Phragmites australis ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1199 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 83 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 132
>gb|AF133480.1|AF133480 Zoysia matrella ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1204 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 81 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 130
>gb|AF133479.1|AF133479 Eleusine indica ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1091 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 84 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 133
>gb|AF133473.1|AF133473 Otatea acuminata ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1185 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 84 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 133
>gb|AF133470.1|AF133470 Bambusa longispiculata ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1206 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 90 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 139
>gb|AF133469.1|AF133469 Nastus elatus ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1211 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 90 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 139
>gb|AF133468.1|AF133468 Schizostachyum luzonicum ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1225 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 90 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 139
>gb|AF133467.1|AF133467 Phyllostachys pubescens ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1232 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 89 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 138
>gb|AF133464.1|AF133464 Lithachne pauciflora ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1189 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 85 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 134
>gb|AF133463.1|AF133463 Sucrea maculata ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1190 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 89 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 138
>gb|AF133460.1|AF133460 Streptogyna americana ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1228 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 89 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 138
>gb|U62793.1|NAU62793 Neurolepis aperta ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1052 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 68 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 117
>gb|U62792.1|CNU62792 Chusquea nudiramea ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1034 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 67 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 116
>gb|U62791.1|CJU62791 Chusquea juergensii ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1059 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 67 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 116
>gb|U62790.1|CVU62790 Chusquea vulcanalis ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1031 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 67 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 116
>gb|U62789.1|CTU62789 Chusquea talamancensis ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1031 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 67 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 116
>gb|U62788.1|CSU62788 Chusquea spencei ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1031 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 67 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 116
>gb|U62784.1|CEU62784 Chusquea exasperata ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1032 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 67 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 116
>gb|U62783.1|CSU62783 Chusquea sp. B ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1031 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 67 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 116
>gb|U62782.1|CTU62782 Chusquea tomentosa ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1030 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 67 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 116
>gb|U62781.1|CSU62781 Chusquea scandens ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1031 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 67 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 116
>gb|U54741.1|SMU54741 Sucrea maculata ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1030 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 66 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 115
>gb|U54747.1|SLU54747 Schizostachyum luzonicum ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1065 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 67 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 116
>gb|U54750.1|RPU54750 Rhipidocladum pittieri ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1010 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 65 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 114
>gb|U54744.1|PPU54744 Phyllostachys pubescens ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1072 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 66 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 115
>gb|U54749.1|OAU54749 Otatea acuminata ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1025 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 61 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 110
>gb|U54746.1|NEU54746 Nastus elatus ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1071 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 67 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 116
>gb|U54755.1|CWU54755 Chusquea windischii ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1034 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 67 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 116
>gb|U54752.1|CTU54752 Chusquea tessellata ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1031 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 67 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 116
>gb|U54758.1|CSU54758 Chusquea sp. 'LC et al. 1309' ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1035 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 67 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 116
>gb|U54754.1|CSU54754 Chusquea serpens ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1031 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 67 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 116
>gb|U54753.1|CSU54753 Chusquea subtessellata ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1031 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 67 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 116
>gb|U54756.1|CPU54756 Chusquea pinifolia ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1038 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 67 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 116
>gb|U54760.1|CLU54760 Chusquea liebmannii ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1032 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 67 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 116
>gb|U54759.1|CCU54759 Chusquea coronalis ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1031 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 66 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 115
>gb|U54757.1|CBU54757 Chusquea bilimekii ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1033 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 67 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 116
>gb|U54745.1|BLU54745 Bambusa longispiculata ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1065 Score = 65.9 bits (33), Expect = 1e-07 Identities = 50/56 (89%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 67 cttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 116
>gb|AY847079.1| Merxmuellera rangei ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1166 Score = 63.9 bits (32), Expect = 6e-07 Identities = 49/55 (89%), Gaps = 6/55 (10%) Strand = Plus / Plus Query: 554 ttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 58 ttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 106
>gb|AF133476.1|AF133476 Brachyelytrum erectum ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1248 Score = 63.9 bits (32), Expect = 6e-07 Identities = 49/55 (89%), Gaps = 6/55 (10%) Strand = Plus / Plus Query: 554 ttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 91 ttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 139
>gb|AF133475.1|AF133475 Avena sativa ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1187 Score = 63.9 bits (32), Expect = 6e-07 Identities = 49/55 (89%), Gaps = 6/55 (10%) Strand = Plus / Plus Query: 554 ttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 41 ttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 89
>gb|AF133472.1|AF133472 Chusquea ramosissima ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1193 Score = 63.9 bits (32), Expect = 6e-07 Identities = 49/55 (89%), Gaps = 6/55 (10%) Strand = Plus / Plus Query: 554 ttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 92 ttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 140
>gb|U54751.1|CRU54751 Chusquea ramosissima ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1032 Score = 63.9 bits (32), Expect = 6e-07 Identities = 49/55 (89%), Gaps = 6/55 (10%) Strand = Plus / Plus Query: 554 ttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 68 ttagtaattatagaaaattaactaata------accaacctattgcttcgtattg 116
>dbj|AB087104.1| Neonotonia wightii chloroplast DNA, rps3-rpl16 intergenic spacer, complete sequence, strain:O00002 Length = 301 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 276 gctaaaattgattattgctgctatccaattcgaactatctatggagtattaggtgtaaaa 335 ||||||||||||||||| |||||| || |||||||||| ||||| || ||||| | ||| Sbjct: 63 gctaaaattgattattgttgctatacagttcgaactatttatggggttttagggatcaaa 122 Query: 336 atttggatatt 346 |||||||||| Sbjct: 123 gtttggatatt 133
>dbj|AB087103.1| Neonotonia wightii chloroplast DNA, rps3-rpl16 intergenic spacer, complete sequence, strain:O00001 Length = 301 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 276 gctaaaattgattattgctgctatccaattcgaactatctatggagtattaggtgtaaaa 335 ||||||||||||||||| |||||| || |||||||||| ||||| || ||||| | ||| Sbjct: 63 gctaaaattgattattgttgctatacagttcgaactatttatggggttttagggatcaaa 122 Query: 336 atttggatatt 346 |||||||||| Sbjct: 123 gtttggatatt 133
>dbj|AB087086.1| Glycine cyrtoloba chloroplast DNA, rps3-rpl16 intergenic spacer, complete sequence Length = 306 Score = 61.9 bits (31), Expect = 2e-06 Identities = 76/91 (83%) Strand = Plus / Plus Query: 256 ttcccctccaaacaatccgcgctaaaattgattattgctgctatccaattcgaactatct 315 |||| |||||||| || || || |||||||||||||| |||||| || |||||||||| | Sbjct: 44 ttcctctccaaaccattcgagcgaaaattgattattgttgctatacagttcgaactattt 103 Query: 316 atggagtattaggtgtaaaaatttggatatt 346 |||| || ||||| | ||| |||||||||| Sbjct: 104 atggggttttagggatcaaagtttggatatt 134
>emb|X03834.1|CHSOL16 Spirodela oligorhiza chloroplast gene for ribosomal protein L16 Length = 2064 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Plus Query: 494 tataattgctatgcttagtgtgtgactcgtt 524 ||||||||||||||||||||||||||||||| Sbjct: 64 tataattgctatgcttagtgtgtgactcgtt 94
>gb|AY847077.1| Stipagrostis zeyheri ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1146 Score = 60.0 bits (30), Expect = 9e-06 Identities = 49/56 (87%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||| |||||||||||||||||||||| |||||| Sbjct: 58 cttagtaattatagaaaatta------actaataaccaacctattgcttngtattg 107
>gb|AY775226.1| Smilax nipponica voucher Fu91277 rpl16 gene, intron; chloroplast Length = 1166 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 488 atttaatataattgctatgcttagtgtgtgactcgtta 525 |||||||| |||||| |||||||||||||||||||||| Sbjct: 996 atttaatagaattgccatgcttagtgtgtgactcgtta 959 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 585 taaccaacctattgcttcgtattg 608 |||||||| ||||||||||||||| Sbjct: 894 taaccaacttattgcttcgtattg 871
>gb|AY775222.1| Smilax riparia voucher Fu99904 rpl16 gene, intron; chloroplast Length = 1144 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 488 atttaatataattgctatgcttagtgtgtgactcgtta 525 ||||||||||||||| |||||||||||||||| ||||| Sbjct: 997 atttaatataattgcaatgcttagtgtgtgacccgtta 960 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||| ||||||||||||||| Sbjct: 880 actaataaccaacttattgcttcgtattg 852
>gb|AY912191.1| Aulonemia patula ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1186 Score = 60.0 bits (30), Expect = 9e-06 Identities = 49/56 (87%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 ||||| |||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 41 cttagnaattatagaaaattaactaata------accaacctattgcttcgtattg 90
>gb|AY847115.1| Streptogyna americana ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1160 Score = 58.0 bits (29), Expect = 4e-05 Identities = 49/56 (87%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 48 cttagtaattatagaaaatt------cactaataaccaacctattgcttcgtattg 97
>gb|AY847114.1| Spartochloa scirpoidea ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1176 Score = 58.0 bits (29), Expect = 4e-05 Identities = 49/56 (87%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct: 63 cttagtaattatagaaaatta------actaataatcaacctattgcttcgtattg 112
>gb|AY847099.1| Chasmanthium laxum rpl16 gene, intron; chloroplast Length = 1165 Score = 58.0 bits (29), Expect = 4e-05 Identities = 49/56 (87%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 55 cttagtaattctagaaaattaa------ctaataaccaacctattgcttcgtattg 104
>gb|AY847097.1| Chasmanthium curvifolium ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 982 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||||||||||| Sbjct: 75 actaataaccaacctattgcttcgtattg 103
>gb|AY847089.1| Tristachya biseriata ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1150 Score = 58.0 bits (29), Expect = 4e-05 Identities = 49/56 (87%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 58 cttagtaattatagaaaatta------actaataacaaacctattgcttcgtattg 107
>gb|AY847088.1| Loudetia simplex ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1028 Score = 58.0 bits (29), Expect = 4e-05 Identities = 49/56 (87%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 28 cttagtaattatagaaaatta------actaataacaaacctattgcttcgtattg 77
>gb|AY847087.1| Danthoniopsis petiolata ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1147 Score = 58.0 bits (29), Expect = 4e-05 Identities = 49/56 (87%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 56 cttagtaattatagaaaatta------actaataacaaacctattgcttcgtattg 105
>gb|AY847086.1| Danthoniopsis dinteri ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1152 Score = 58.0 bits (29), Expect = 4e-05 Identities = 49/56 (87%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 58 cttagtaattatagaaaatta------actaataacaaacctattgcttcgtattg 107
>gb|AY847085.1| Arundinella hirta ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1186 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||||||||||| Sbjct: 78 actaataaccaacctattgcttcgtattg 106
>gb|AY847084.1| Pennisetum setaceum ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1016 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||||||||||| Sbjct: 80 actaataaccaacctattgcttcgtattg 108
>gb|AY847083.1| Paspalum conjugatum ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1157 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||||||||||| Sbjct: 73 actaataaccaacctattgcttcgtattg 101
>gb|AY847072.1| Melica altissima ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1139 Score = 58.0 bits (29), Expect = 4e-05 Identities = 49/56 (87%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 13 cttagtaattctagaaaatta------actaataaccaacctattgcttcgtattg 62
>gb|AY540601.1| Graptopetalum pusillum ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1375 Score = 58.0 bits (29), Expect = 4e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 488 atttaatataattgctatgcttagtgtgtgactcgtt 524 |||| ||| |||||||||||||||||||||||||||| Sbjct: 1200 atttgatagaattgctatgcttagtgtgtgactcgtt 1164 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 333 aaaatttggatattcgtagacgaag 357 |||||||||||||| |||||||||| Sbjct: 1366 aaaatttggatatttgtagacgaag 1342
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||||||||||| Sbjct: 132538 actaataaccaacctattgcttcgtattg 132510
>gb|AY912216.1| Streptogyna americana ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1172 Score = 58.0 bits (29), Expect = 4e-05 Identities = 49/56 (87%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 49 cttagtaattatagaaaatt------cactaataaccaacctattgcttcgtattg 98
>gb|AY912213.1| Valiha diffusa ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1163 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||||||||||| Sbjct: 79 actaataaccaacctattgcttcgtattg 107
>gb|AY912211.1| Perrierbambus madagascariensis ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1214 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||||||||||| Sbjct: 71 actaataaccaacctattgcttcgtattg 99
>gb|AY912207.1| Nastus borbonicus ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1219 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||||||||||| Sbjct: 89 actaataaccaacctattgcttcgtattg 117
>gb|AY912197.1| Neurolepis nana ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1230 Score = 58.0 bits (29), Expect = 4e-05 Identities = 49/56 (87%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 70 cttagtaattatagaaaatta------actaataaccaacctattgcttcatattg 119
>gb|AY912196.1| Neurolepis aristata ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1206 Score = 58.0 bits (29), Expect = 4e-05 Identities = 49/56 (87%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 48 cttagtaattatagaaaatta------actaataaccaacctattgcttcctattg 97
>gb|DQ289159.1| Oryza granulata L ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1142 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||||||||||| Sbjct: 100 actaataaccaacctattgcttcgtattg 128 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 501 gctatgcttagtgtgtgactcgtta 525 ||||||||||||||||||||||||| Sbjct: 1 gctatgcttagtgtgtgactcgtta 25
>gb|DQ289158.1| Oryza australiensis k ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1117 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||||||||||| Sbjct: 100 actaataaccaacctattgcttcgtattg 128 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 501 gctatgcttagtgtgtgactcgtta 525 ||||||||||||||||||||||||| Sbjct: 1 gctatgcttagtgtgtgactcgtta 25
>gb|DQ289156.1| Oryza grandiglumis I ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1117 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||||||||||| Sbjct: 99 actaataaccaacctattgcttcgtattg 127 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 501 gctatgcttagtgtgtgactcgtta 525 ||||||||||||||||||||||||| Sbjct: 1 gctatgcttagtgtgtgactcgtta 25
>gb|DQ289155.1| Oryza latifolia H ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1118 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||||||||||| Sbjct: 99 actaataaccaacctattgcttcgtattg 127 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 501 gctatgcttagtgtgtgactcgtta 525 ||||||||||||||||||||||||| Sbjct: 1 gctatgcttagtgtgtgactcgtta 25
>gb|DQ289154.1| Oryza officinalis G ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1118 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||||||||||| Sbjct: 100 actaataaccaacctattgcttcgtattg 128 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 501 gctatgcttagtgtgtgactcgtta 525 ||||||||||||||||||||||||| Sbjct: 1 gctatgcttagtgtgtgactcgtta 25
>gb|DQ289153.1| Oryza glumipatula F ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1110 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||||||||||| Sbjct: 99 actaataaccaacctattgcttcgtattg 127 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 501 gctatgcttagtgtgtgactcgtta 525 ||||||||||||||||||||||||| Sbjct: 1 gctatgcttagtgtgtgactcgtta 25
>gb|DQ289152.1| Oryza glumipatula E ribosomal protein L16 (ribosomal protein L16) gene, partial cds; chloroplast Length = 1109 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||||||||||| Sbjct: 99 actaataaccaacctattgcttcgtattg 127 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 501 gctatgcttagtgtgtgactcgtta 525 ||||||||||||||||||||||||| Sbjct: 1 gctatgcttagtgtgtgactcgtta 25
>gb|DQ289151.1| Oryza meridionalis D ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1112 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||||||||||| Sbjct: 99 actaataaccaacctattgcttcgtattg 127 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 501 gctatgcttagtgtgtgactcgtta 525 ||||||||||||||||||||||||| Sbjct: 1 gctatgcttagtgtgtgactcgtta 25
>gb|DQ289150.1| Oryza barthii C ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1106 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||||||||||| Sbjct: 99 actaataaccaacctattgcttcgtattg 127 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 501 gctatgcttagtgtgtgactcgtta 525 ||||||||||||||||||||||||| Sbjct: 1 gctatgcttagtgtgtgactcgtta 25
>gb|DQ289148.1| Oryza sativa A ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1113 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||||||||||| Sbjct: 99 actaataaccaacctattgcttcgtattg 127 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Plus Query: 501 gctatgcttagtgtgtgactcgtta 525 ||||||||||||||||||||||||| Sbjct: 1 gctatgcttagtgtgtgactcgtta 25
>dbj|AP007101.1| Saccharum spontaneum chloroplast gene for ribosomal protein L16, partial cds, strain: SES205A, clone: SSE-79kb Length = 671 Score = 58.0 bits (29), Expect = 4e-05 Identities = 49/56 (87%), Gaps = 6/56 (10%) Strand = Plus / Minus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 ||||||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 579 cttagtaatgatagaaaatta------actaataaccaacctattgcttcgtattg 530 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 498 attgctatgcttagtgtgtgactcgtta 525 |||||||||||||||||||||||||||| Sbjct: 671 attgctatgcttagtgtgtgactcgtta 644
>dbj|AP007100.1| Saccharum spontaneum chloroplast gene for ribosomal protein L16, partial cds, strain: Jw385, clone: SJw-79kb Length = 672 Score = 58.0 bits (29), Expect = 4e-05 Identities = 49/56 (87%), Gaps = 6/56 (10%) Strand = Plus / Minus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 ||||||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 579 cttagtaatgatagaaaatta------actaataaccaacctattgcttcgtattg 530 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 498 attgctatgcttagtgtgtgactcgtta 525 |||||||||||||||||||||||||||| Sbjct: 672 attgctatgcttagtgtgtgactcgtta 645
>dbj|AP007099.1| Saccharum spontaneum chloroplast gene for ribosomal protein L16, partial cds, strain: Glagah, clone: SGl-79kb Length = 671 Score = 58.0 bits (29), Expect = 4e-05 Identities = 49/56 (87%), Gaps = 6/56 (10%) Strand = Plus / Minus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 ||||||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 579 cttagtaatgatagaaaatta------actaataaccaacctattgcttcgtattg 530 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 498 attgctatgcttagtgtgtgactcgtta 525 |||||||||||||||||||||||||||| Sbjct: 671 attgctatgcttagtgtgtgactcgtta 644
>dbj|AP007098.1| Saccharum edule chloroplast gene for ribosomal protein L16, partial cds, strain: COL/PAPUA N.G/TARC/E12, clone: EPN-79kb Length = 666 Score = 58.0 bits (29), Expect = 4e-05 Identities = 49/56 (87%), Gaps = 6/56 (10%) Strand = Plus / Minus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 ||||||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 574 cttagtaatgatagaaaatta------actaataaccaacctattgcttcgtattg 525 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 498 attgctatgcttagtgtgtgactcgtta 525 |||||||||||||||||||||||||||| Sbjct: 666 attgctatgcttagtgtgtgactcgtta 639
>dbj|AP007097.1| Saccharum edule chloroplast gene for ribosomal protein L16, partial cds, strain: IN95-009, clone: EIN-79kb Length = 666 Score = 58.0 bits (29), Expect = 4e-05 Identities = 49/56 (87%), Gaps = 6/56 (10%) Strand = Plus / Minus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 ||||||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 574 cttagtaatgatagaaaatta------actaataaccaacctattgcttcgtattg 525 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 498 attgctatgcttagtgtgtgactcgtta 525 |||||||||||||||||||||||||||| Sbjct: 666 attgctatgcttagtgtgtgactcgtta 639
>dbj|AP007096.1| Saccharum sinense chloroplast gene for ribosomal protein L16, partial cds, strain: Ooshima, clone: SiO-79kb Length = 666 Score = 58.0 bits (29), Expect = 4e-05 Identities = 49/56 (87%), Gaps = 6/56 (10%) Strand = Plus / Minus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 ||||||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 574 cttagtaatgatagaaaatta------actaataaccaacctattgcttcgtattg 525 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 498 attgctatgcttagtgtgtgactcgtta 525 |||||||||||||||||||||||||||| Sbjct: 666 attgctatgcttagtgtgtgactcgtta 639
>dbj|AP007095.1| Saccharum barberi chloroplast gene for ribosomal protein L16, partial cds, strain: Chunnee, clone: BCh-79kb Length = 666 Score = 58.0 bits (29), Expect = 4e-05 Identities = 49/56 (87%), Gaps = 6/56 (10%) Strand = Plus / Minus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 ||||||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 574 cttagtaatgatagaaaatta------actaataaccaacctattgcttcgtattg 525 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 498 attgctatgcttagtgtgtgactcgtta 525 |||||||||||||||||||||||||||| Sbjct: 666 attgctatgcttagtgtgtgactcgtta 639
>dbj|AP007094.1| Saccharum sinense chloroplast gene for ribosomal protein L16, partial cds, strain: Tekcha, clone: SiTe-79kb Length = 666 Score = 58.0 bits (29), Expect = 4e-05 Identities = 49/56 (87%), Gaps = 6/56 (10%) Strand = Plus / Minus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 ||||||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 574 cttagtaatgatagaaaatta------actaataaccaacctattgcttcgtattg 525 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 498 attgctatgcttagtgtgtgactcgtta 525 |||||||||||||||||||||||||||| Sbjct: 666 attgctatgcttagtgtgtgactcgtta 639
>dbj|AP007093.1| Saccharum barberi chloroplast gene for ribosomal protein L16, partial cds, strain: Kewali14, clone: BKe-79kb Length = 666 Score = 58.0 bits (29), Expect = 4e-05 Identities = 49/56 (87%), Gaps = 6/56 (10%) Strand = Plus / Minus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 ||||||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 574 cttagtaatgatagaaaatta------actaataaccaacctattgcttcgtattg 525 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 498 attgctatgcttagtgtgtgactcgtta 525 |||||||||||||||||||||||||||| Sbjct: 666 attgctatgcttagtgtgtgactcgtta 639
>dbj|AP007092.1| Saccharum robustum chloroplast gene for ribosomal protein L16, exon 2, partial sequence Length = 666 Score = 58.0 bits (29), Expect = 4e-05 Identities = 49/56 (87%), Gaps = 6/56 (10%) Strand = Plus / Minus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 ||||||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 574 cttagtaatgatagaaaatta------actaataaccaacctattgcttcgtattg 525 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 498 attgctatgcttagtgtgtgactcgtta 525 |||||||||||||||||||||||||||| Sbjct: 666 attgctatgcttagtgtgtgactcgtta 639
>dbj|AP007091.1| Saccharum robustum chloroplast gene for ribosomal protein L16, partial cds, strain: 6, clone: R6-79kb Length = 666 Score = 58.0 bits (29), Expect = 4e-05 Identities = 49/56 (87%), Gaps = 6/56 (10%) Strand = Plus / Minus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 ||||||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 574 cttagtaatgatagaaaatta------actaataaccaacctattgcttcgtattg 525 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 498 attgctatgcttagtgtgtgactcgtta 525 |||||||||||||||||||||||||||| Sbjct: 666 attgctatgcttagtgtgtgactcgtta 639
>dbj|AP007090.1| Saccharum officinarum chloroplast gene for ribosomal protein L16, partial cds, strain: Fiji40, clone: OFi-79kb Length = 665 Score = 58.0 bits (29), Expect = 4e-05 Identities = 49/56 (87%), Gaps = 6/56 (10%) Strand = Plus / Minus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 ||||||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 573 cttagtaatgatagaaaatta------actaataaccaacctattgcttcgtattg 524 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 498 attgctatgcttagtgtgtgactcgtta 525 |||||||||||||||||||||||||||| Sbjct: 665 attgctatgcttagtgtgtgactcgtta 638
>dbj|AP007089.1| Saccharum officinarum chloroplast gene for ribosomal protein L16, partial cds, strain: Badila, clone: OBa-79kb Length = 665 Score = 58.0 bits (29), Expect = 4e-05 Identities = 49/56 (87%), Gaps = 6/56 (10%) Strand = Plus / Minus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 ||||||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 573 cttagtaatgatagaaaatta------actaataaccaacctattgcttcgtattg 524 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 498 attgctatgcttagtgtgtgactcgtta 525 |||||||||||||||||||||||||||| Sbjct: 665 attgctatgcttagtgtgtgactcgtta 638
>gb|AF133492.1|AF133492 Humbertochloa greenwayi ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1218 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||||||||||| Sbjct: 103 actaataaccaacctattgcttcgtattg 131
>gb|AF133488.1|AF133488 Pharus lappulaceus ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1182 Score = 58.0 bits (29), Expect = 4e-05 Identities = 49/56 (87%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct: 71 cttagtaattatagaaaatta------actaataaccaacttattgcttcgtattg 120
>gb|AF133482.1|AF133482 Chasmanthium laxum ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1195 Score = 58.0 bits (29), Expect = 4e-05 Identities = 49/56 (87%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 81 cttagtaattgtagaaaatta------actaataaccaacctattgcttcgtattg 130
>gb|AF133481.1|AF133481 Chloris distichophylla ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1180 Score = 58.0 bits (29), Expect = 4e-05 Identities = 49/56 (87%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 85 cttagtaattatagaaaatta------actaataaccaacctattgcttcatattg 134
>gb|AF133478.1|AF133478 Sorghum bicolor ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1200 Score = 58.0 bits (29), Expect = 4e-05 Identities = 49/56 (87%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 ||||||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 77 cttagtaatgatagaaaatta------actaataaccaacctattgcttcgtattg 126
>gb|AF133477.1|AF133477 Zea mays ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1190 Score = 58.0 bits (29), Expect = 4e-05 Identities = 49/56 (87%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 ||||||||| ||||||||||| ||||||||||||||||||||||||||||| Sbjct: 46 cttagtaatgatagaaaatta------actaataaccaacctattgcttcgtattg 95
>gb|AF133466.1|AF133466 Pseudosasa japonica ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1225 Score = 58.0 bits (29), Expect = 4e-05 Identities = 49/56 (87%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 89 cttagtaattatagaaaatta------actaataactaacctattgcttcgtattg 138
>gb|AF133465.1|AF133465 Arundinaria gigantea ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1225 Score = 58.0 bits (29), Expect = 4e-05 Identities = 49/56 (87%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||| ||||||||| ||||||||||||||||||| Sbjct: 89 cttagtaattatagaaaatta------actaataactaacctattgcttcgtattg 138
>gb|AF133461.1|AF133461 Buergersiochloa bambusoides ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1216 Score = 58.0 bits (29), Expect = 4e-05 Identities = 49/56 (87%), Gaps = 6/56 (10%) Strand = Plus / Plus Query: 553 cttagtaattatagaaaattaactaatactaataaccaacctattgcttcgtattg 608 |||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 84 cttagtaattatagaaaaata------actaataaccaacctattgcttcgtattg 133
>gb|AF133458.1|AF133458 Leersia virginica ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1209 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Plus Query: 580 actaataaccaacctattgcttcgtattg 608 ||||||||||||||||||||||||||||| Sbjct: 87 actaataaccaacctattgcttcgtattg 115 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,837,265 Number of Sequences: 3902068 Number of extensions: 7837265 Number of successful extensions: 199620 Number of sequences better than 10.0: 589 Number of HSP's better than 10.0 without gapping: 595 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 196720 Number of HSP's gapped (non-prelim): 2821 length of query: 608 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 585 effective length of database: 17,143,297,704 effective search space: 10028829156840 effective search space used: 10028829156840 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)