| Clone Name | basd23m12 |
|---|---|
| Clone Library Name | barley_pub |
>RL19B_ARATH (Q9LUQ6) 60S ribosomal protein L19-2| Length = 209 Score = 245 bits (626), Expect = 8e-65 Identities = 125/185 (67%), Positives = 136/185 (73%) Frame = +2 Query: 59 MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPQKIXXX 238 MVSLK+QKRLA+SV+KCGKGKVWLDPNE +ISMANSRQNIRKLVKDGFIIRKP KI Sbjct: 1 MVSLKIQKRLAASVMKCGKGKVWLDPNESGDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60 Query: 239 XXXXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMY 418 EAK+KGRHSGYGKR+GTREARLPTKI KYRE+KKID+HMY Sbjct: 61 SRARALNEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRFLSKYRESKKIDRHMY 120 Query: 419 HDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQFXXXXXXXXXXXXXXXXXXXXX 598 HDMY+KVKGN+FKNKRVLMESIHK KAEKAREKTL+DQF Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKMKAEKAREKTLADQFEAKRIKNKASRERKFARREER 180 Query: 599 LAQGP 613 LAQGP Sbjct: 181 LAQGP 185
>RL19A_ARATH (Q9SRX2) 60S ribosomal protein L19-1| Length = 214 Score = 243 bits (621), Expect = 3e-64 Identities = 125/185 (67%), Positives = 135/185 (72%) Frame = +2 Query: 59 MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPQKIXXX 238 MVSLKLQKRLA+SV+KCGKGKVWLDPNE ++ISMANSRQNIRKLVKDGFIIRKP KI Sbjct: 1 MVSLKLQKRLAASVMKCGKGKVWLDPNESSDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60 Query: 239 XXXXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMY 418 AK KGRHSGYGKR+GTREARLPTK+ KYRE KKIDKHMY Sbjct: 61 SRARKMKIAKMKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDKHMY 120 Query: 419 HDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQFXXXXXXXXXXXXXXXXXXXXX 598 HDMY++VKGN+FKNKRVLMESIHKSKAEKAREKTLSDQF Sbjct: 121 HDMYMRVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 180 Query: 599 LAQGP 613 LA+GP Sbjct: 181 LAKGP 185
>RL19C_ARATH (P49693) 60S ribosomal protein L19-3| Length = 208 Score = 242 bits (618), Expect = 6e-64 Identities = 126/185 (68%), Positives = 135/185 (72%) Frame = +2 Query: 59 MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPQKIXXX 238 MVSLKLQKRLASSVLKCGK KVWLDPNE ++ISMANSRQNIRKLVKDGFIIRKP KI Sbjct: 1 MVSLKLQKRLASSVLKCGKRKVWLDPNEGSDISMANSRQNIRKLVKDGFIIRKPTKIHSR 60 Query: 239 XXXXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMY 418 AK+KGRHSGYGKR+GTREARLPTK+ KYRE KKID+HMY Sbjct: 61 SRARQLNIAKRKGRHSGYGKRKGTREARLPTKVLWMRRMRVLRRLLKKYRETKKIDRHMY 120 Query: 419 HDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQFXXXXXXXXXXXXXXXXXXXXX 598 HDMY+KVKGN+FKNKRVLMESIHKSKAEKAREKTLSDQF Sbjct: 121 HDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKNKASRERKHARREER 180 Query: 599 LAQGP 613 LA+GP Sbjct: 181 LAKGP 185
>RL19_DROME (P36241) 60S ribosomal protein L19| Length = 203 Score = 202 bits (514), Expect = 7e-52 Identities = 97/158 (61%), Positives = 118/158 (74%) Frame = +2 Query: 59 MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPQKIXXX 238 M SLKLQKRLA+SVL+CGK KVWLDPNE+NEI+ NSRQNIRKL+KDG II+KP + Sbjct: 1 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 60 Query: 239 XXXXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMY 418 EA++KGRH G+GKR+GT AR+PTK+ KYR++KKID+H+Y Sbjct: 61 YRVRKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLY 120 Query: 419 HDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQ 532 HD+Y+K KGN+FKNKRVLME IHK KAEK R K L+DQ Sbjct: 121 HDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQ 158
>RL19_XENLA (Q7ZYS1) 60S ribosomal protein L19| Length = 197 Score = 196 bits (497), Expect = 7e-50 Identities = 97/158 (61%), Positives = 115/158 (72%) Frame = +2 Query: 59 MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPQKIXXX 238 M L+LQKRLASSVL+CGK KVWLDPNE NEI+ ANSRQ IRKLVKDG IIRKP + Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLVKDGLIIRKPVTVHSR 60 Query: 239 XXXXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMY 418 A++KGRH G GKR+GT AR+P K+ +YRE+KKID+HMY Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKLSWMRRMRILRRLLRRYRESKKIDRHMY 120 Query: 419 HDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQ 532 H +YLKVKGN+FKNKR+LME IHK KA+KAR+K L+DQ Sbjct: 121 HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>RL19_RAT (P84100) 60S ribosomal protein L19| Length = 196 Score = 196 bits (497), Expect = 7e-50 Identities = 96/158 (60%), Positives = 115/158 (72%) Frame = +2 Query: 59 MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPQKIXXX 238 M L+LQKRLASSVL+CGK KVWLDPNE NEI+ ANSRQ IRKL+KDG IIRKP + Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60 Query: 239 XXXXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMY 418 A++KGRH G GKR+GT AR+P K+ +YRE+KKID+HMY Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120 Query: 419 HDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQ 532 H +YLKVKGN+FKNKR+LME IHK KA+KAR+K L+DQ Sbjct: 121 HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>RL19_PONPY (Q5RB99) 60S ribosomal protein L19| Length = 196 Score = 196 bits (497), Expect = 7e-50 Identities = 96/158 (60%), Positives = 115/158 (72%) Frame = +2 Query: 59 MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPQKIXXX 238 M L+LQKRLASSVL+CGK KVWLDPNE NEI+ ANSRQ IRKL+KDG IIRKP + Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60 Query: 239 XXXXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMY 418 A++KGRH G GKR+GT AR+P K+ +YRE+KKID+HMY Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120 Query: 419 HDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQ 532 H +YLKVKGN+FKNKR+LME IHK KA+KAR+K L+DQ Sbjct: 121 HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>RL19_MOUSE (P84099) 60S ribosomal protein L19| Length = 196 Score = 196 bits (497), Expect = 7e-50 Identities = 96/158 (60%), Positives = 115/158 (72%) Frame = +2 Query: 59 MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPQKIXXX 238 M L+LQKRLASSVL+CGK KVWLDPNE NEI+ ANSRQ IRKL+KDG IIRKP + Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60 Query: 239 XXXXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMY 418 A++KGRH G GKR+GT AR+P K+ +YRE+KKID+HMY Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120 Query: 419 HDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQ 532 H +YLKVKGN+FKNKR+LME IHK KA+KAR+K L+DQ Sbjct: 121 HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>RL19_MACFA (Q8HXN9) 60S ribosomal protein L19| Length = 196 Score = 196 bits (497), Expect = 7e-50 Identities = 96/158 (60%), Positives = 115/158 (72%) Frame = +2 Query: 59 MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPQKIXXX 238 M L+LQKRLASSVL+CGK KVWLDPNE NEI+ ANSRQ IRKL+KDG IIRKP + Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60 Query: 239 XXXXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMY 418 A++KGRH G GKR+GT AR+P K+ +YRE+KKID+HMY Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120 Query: 419 HDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQ 532 H +YLKVKGN+FKNKR+LME IHK KA+KAR+K L+DQ Sbjct: 121 HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>RL19_HUMAN (P84098) 60S ribosomal protein L19| Length = 196 Score = 196 bits (497), Expect = 7e-50 Identities = 96/158 (60%), Positives = 115/158 (72%) Frame = +2 Query: 59 MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPQKIXXX 238 M L+LQKRLASSVL+CGK KVWLDPNE NEI+ ANSRQ IRKL+KDG IIRKP + Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60 Query: 239 XXXXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMY 418 A++KGRH G GKR+GT AR+P K+ +YRE+KKID+HMY Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120 Query: 419 HDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQ 532 H +YLKVKGN+FKNKR+LME IHK KA+KAR+K L+DQ Sbjct: 121 HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>RL19_BOVIN (Q3T0W9) 60S ribosomal protein L19| Length = 196 Score = 196 bits (497), Expect = 7e-50 Identities = 96/158 (60%), Positives = 115/158 (72%) Frame = +2 Query: 59 MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPQKIXXX 238 M L+LQKRLASSVL+CGK KVWLDPNE NEI+ ANSRQ IRKL+KDG IIRKP + Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60 Query: 239 XXXXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMY 418 A++KGRH G GKR+GT AR+P K+ +YRE+KKID+HMY Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMY 120 Query: 419 HDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQ 532 H +YLKVKGN+FKNKR+LME IHK KA+KAR+K L+DQ Sbjct: 121 HSLYLKVKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>RL19_BRARE (Q6P5L3) 60S ribosomal protein L19| Length = 196 Score = 192 bits (488), Expect = 8e-49 Identities = 95/158 (60%), Positives = 114/158 (72%) Frame = +2 Query: 59 MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPQKIXXX 238 M L+LQKRLASSVL+CGK KVWLDPNE NEI+ ANSRQ IRKLVKDG II+KP + Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLVKDGLIIKKPVTVHSR 60 Query: 239 XXXXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMY 418 A++KGRH G GKR+GT AR+P K+ +YREAKKID+HMY Sbjct: 61 ARCRKNTLARRKGRHMGVGKRKGTANARMPEKLCWMRRMRILRRLLRRYREAKKIDRHMY 120 Query: 419 HDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQ 532 H +YL+ KGN+FKNKR+LME IHK KA+KAR+K L+DQ Sbjct: 121 HSLYLRAKGNVFKNKRILMEHIHKLKADKARKKLLADQ 158
>RL19_ICTPU (Q90YU8) 60S ribosomal protein L19| Length = 196 Score = 190 bits (483), Expect = 3e-48 Identities = 94/158 (59%), Positives = 114/158 (72%) Frame = +2 Query: 59 MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPQKIXXX 238 M L+LQKRLASSVL+CGK KVWLDPNE NEI+ ANSRQ IRKLVKDG II+KP + Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQAIRKLVKDGLIIKKPVTVHSR 60 Query: 239 XXXXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMY 418 A++KGRH G GKR+GT AR+P K+ +YRE+KKID+HMY Sbjct: 61 ARCRKNTLARRKGRHMGIGKRKGTANARMPEKLCWMRRMRILRRLLRRYRESKKIDRHMY 120 Query: 419 HDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQ 532 H +YL+ KGN+FKNKR+LME IHK KA++AR+K LSDQ Sbjct: 121 HSLYLRAKGNVFKNKRILMEHIHKLKADRARKKLLSDQ 158
>RL19_DICDI (P14329) 60S ribosomal protein L19 (Vegetative-specific protein| V14) (22 kDa calmodulin-binding protein) Length = 186 Score = 187 bits (476), Expect = 2e-47 Identities = 92/158 (58%), Positives = 112/158 (70%) Frame = +2 Query: 59 MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPQKIXXX 238 MVSLKLQKRLA+S+LKCGKG+VW+DPNE+ +++MANSR N+R+L+ GFI+RKP + Sbjct: 1 MVSLKLQKRLAASILKCGKGRVWIDPNEIADVAMANSRDNVRRLIATGFIMRKPVVVHSR 60 Query: 239 XXXXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMY 418 AK+ GRH G G R GTREARLP+KI KYREAKKIDKH Y Sbjct: 61 SRAREHNAAKRLGRHRGAGNRLGTREARLPSKILWIRRIRVLRRLLKKYREAKKIDKHSY 120 Query: 419 HDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQ 532 ++YLK KGN+FKNKR L+E I KSK EK REK + DQ Sbjct: 121 RELYLKAKGNVFKNKRTLIEYIVKSKTEKLREKLIQDQ 158
>RL19_CAEEL (O02639) 60S ribosomal protein L19| Length = 198 Score = 182 bits (463), Expect = 6e-46 Identities = 90/158 (56%), Positives = 112/158 (70%) Frame = +2 Query: 59 MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPQKIXXX 238 M +L+LQKRLAS+VLKCGK +VWLDPNEV+EIS ANSRQ+IR+LV DG IIRKP + Sbjct: 1 MSNLRLQKRLASAVLKCGKHRVWLDPNEVSEISGANSRQSIRRLVNDGLIIRKPVTVHSR 60 Query: 239 XXXXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMY 418 EA++KGRH+GYGKRRGT AR+P K +YR+AKK+DKH+Y Sbjct: 61 FRAREYEEARRKGRHTGYGKRRGTANARMPEKTLWIRRMRVLRNLLRRYRDAKKLDKHLY 120 Query: 419 HDMYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQ 532 H++YL+ KGN FKNK+ L+E I K K E R K L+DQ Sbjct: 121 HELYLRAKGNNFKNKKNLIEYIFKKKTENKRAKQLADQ 158
>RL19_SCHPO (P05734) 60S ribosomal protein L19 (YL15)| Length = 192 Score = 177 bits (448), Expect = 3e-44 Identities = 84/156 (53%), Positives = 110/156 (70%) Frame = +2 Query: 65 SLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPQKIXXXXX 244 +L+ QKRLA+SVLKCGK KVW+DPNE++EIS ANSRQN+RKL+KDG +IRKP + Sbjct: 2 NLRTQKRLAASVLKCGKRKVWMDPNEISEISNANSRQNVRKLIKDGLVIRKPNLMHSRFR 61 Query: 245 XXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMYHD 424 AK+ GRH+GYGKR+GT EAR+P+ + KYRE+ KIDKH+YH Sbjct: 62 IRKTHAAKRLGRHTGYGKRKGTAEARMPSAVVWMRRQRVLRRLLRKYRESGKIDKHLYHT 121 Query: 425 MYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQ 532 +YL+ KGN FK+KR L+E I ++KAE R K + +Q Sbjct: 122 LYLEAKGNTFKHKRALIEHIQRAKAEANRTKLIQEQ 157
>RL19_YEAST (P05735) 60S ribosomal protein L19 (L23) (YL14) (RP33) (RP15L)| Length = 188 Score = 162 bits (409), Expect = 1e-39 Identities = 79/156 (50%), Positives = 109/156 (69%) Frame = +2 Query: 65 SLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPQKIXXXXX 244 +L+ QKRLA+SV+ GK KVWLDPNE +EI+ ANSR IRKLVK+G I++K + Sbjct: 2 NLRTQKRLAASVVGVGKRKVWLDPNETSEIAQANSRNAIRKLVKNGTIVKKAVTVHSKSR 61 Query: 245 XXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMYHD 424 ++K++GRHSGYGKR+GTREARLP+++ KYR+A KIDKH+YH Sbjct: 62 TRAHAQSKREGRHSGYGKRKGTREARLPSQVVWIRRLRVLRRLLAKYRDAGKIDKHLYHV 121 Query: 425 MYLKVKGNMFKNKRVLMESIHKSKAEKAREKTLSDQ 532 +Y + KGN FK+KR L+E I ++KA+ REK L+++ Sbjct: 122 LYKESKGNAFKHKRALVEHIIQAKADAQREKALNEE 157
>RL19_PYRHO (O59437) 50S ribosomal protein L19e| Length = 150 Score = 112 bits (280), Expect = 1e-24 Identities = 54/138 (39%), Positives = 84/138 (60%) Frame = +2 Query: 59 MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPQKIXXX 238 M +LK+Q+R+A+ +LKCG+ +VW+DP +V+E++ A +R++IR+L+K+G I +KP + Sbjct: 1 MNTLKMQRRIAAELLKCGENRVWIDPEKVDEVASAITREDIRRLIKEGVIRKKPIEGQSR 60 Query: 239 XXXXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMY 418 E K+KGRH G G R+G + AR+ K K +E KKID+ Y Sbjct: 61 YRARIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRRELRKLKEQKKIDRKTY 120 Query: 419 HDMYLKVKGNMFKNKRVL 472 +Y++ KG FKNK L Sbjct: 121 RMLYIRAKGGQFKNKHQL 138
>RL19_PYRAB (Q9V1V3) 50S ribosomal protein L19e| Length = 151 Score = 111 bits (278), Expect = 2e-24 Identities = 54/151 (35%), Positives = 87/151 (57%) Frame = +2 Query: 59 MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPQKIXXX 238 M +LK+Q+R+A+ +LKCG+ ++W+DP V++++ A +R++IR+L+K+G I +KP K Sbjct: 1 MKTLKMQRRVAAELLKCGENRIWIDPERVDDVASAITREDIRRLIKEGVIKKKPVKGQSR 60 Query: 239 XXXXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMY 418 E K+KGRH G G R+G + AR+ K K +E KKID+ Y Sbjct: 61 YRARIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKEQKKIDRRTY 120 Query: 419 HDMYLKVKGNMFKNKRVLMESIHKSKAEKAR 511 +Y++ KG FK+K L + + K R Sbjct: 121 RMLYIRAKGGQFKSKHQLYMFLEEHNLLKKR 151
>RL19_PYRFU (Q8U016) 50S ribosomal protein L19e (PfeL19)| Length = 150 Score = 108 bits (271), Expect = 1e-23 Identities = 50/138 (36%), Positives = 82/138 (59%) Frame = +2 Query: 59 MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPQKIXXX 238 M +LK+Q+R+A+ +LKCG+ ++W+DP +++++ A +R++I++L+K+G I +KP K Sbjct: 1 MNTLKMQRRIAAEILKCGENRIWIDPERIDDVASAITREDIKRLIKEGVIKKKPIKGQSR 60 Query: 239 XXXXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMY 418 E K+KGRH G G R+G + AR+ K K + KKID+ Y Sbjct: 61 YRAKIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKAQKKIDRKTY 120 Query: 419 HDMYLKVKGNMFKNKRVL 472 +Y++ KG FKNK L Sbjct: 121 RMLYIRAKGGQFKNKHQL 138
>RL19_MAIZE (Q08066) 60S ribosomal protein L19 (Fragment)| Length = 62 Score = 101 bits (252), Expect = 2e-21 Identities = 49/54 (90%), Positives = 52/54 (96%) Frame = +2 Query: 68 LKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPQKI 229 LKLQKRLA+S LKCGKGKVWLDPNEV+EISMANSRQNIRKLVKDGFII+KP KI Sbjct: 1 LKLQKRLAASYLKCGKGKVWLDPNEVSEISMANSRQNIRKLVKDGFIIKKPHKI 54
>RL19_METJA (P54043) 50S ribosomal protein L19e| Length = 151 Score = 94.0 bits (232), Expect = 4e-19 Identities = 44/135 (32%), Positives = 75/135 (55%) Frame = +2 Query: 59 MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPQKIXXX 238 ++ + +Q+R+A+ +LKCG +VW+DP +++ + MA S+ +IR L+K+G I +K +K Sbjct: 3 IMDVSVQRRMAAEILKCGIERVWIDPTQLDRVKMAMSKDDIRALIKEGVIKKKQKKGISS 62 Query: 239 XXXXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMY 418 E ++KGR G G RRG AR P K + R++ KID+ +Y Sbjct: 63 ARVKKLKEQRKKGRRRGPGSRRGAAGARTPPKERWMATIRALRKTLKQLRDSGKIDRKVY 122 Query: 419 HDMYLKVKGNMFKNK 463 +Y KG F+++ Sbjct: 123 RKLYRMAKGGAFRSR 137
>RL19_ARCFU (O28372) 50S ribosomal protein L19e| Length = 149 Score = 91.7 bits (226), Expect = 2e-18 Identities = 46/134 (34%), Positives = 73/134 (54%) Frame = +2 Query: 59 MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPQKIXXX 238 ++ L LQ+RLA+SVLKCG+ +VW DP + +I+ A ++Q+IR+L++ G I RKP Sbjct: 3 VMDLSLQRRLAASVLKCGENRVWFDPAALEDIATAATKQDIRELIEQGVIKRKPVNGVSR 62 Query: 239 XXXXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMY 418 K+KGR G+G R+G + AR+P K + + +D+ Y Sbjct: 63 ARINKRKLQKRKGRRRGHGSRKGAKGARMPRKRMWILRIRALRKALRQMKAEGVVDRRTY 122 Query: 419 HDMYLKVKGNMFKN 460 +Y K KG F++ Sbjct: 123 RILYRKAKGGEFRS 136
>RL19_METTH (O26129) 50S ribosomal protein L19e| Length = 148 Score = 91.7 bits (226), Expect = 2e-18 Identities = 45/134 (33%), Positives = 72/134 (53%) Frame = +2 Query: 62 VSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPQKIXXXX 241 ++L QKRLA+ +LK G ++W+DP ++E+S A +R +++L+KDG I KP+K Sbjct: 1 MNLTTQKRLAADILKVGVNRIWIDPERIDEVSRAITRDGVKQLIKDGAIKAKPKKGISSY 60 Query: 242 XXXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMYH 421 + K+KGR G G +G + AR P K + R+ ++I+K Y Sbjct: 61 RSKKIAQQKKKGRRRGPGSIKGAKGARRPKKDEWMTTIRALRKDLKEMRDNREINKSTYR 120 Query: 422 DMYLKVKGNMFKNK 463 +Y KG FK+K Sbjct: 121 KLYKMAKGGAFKSK 134
>RL19_METVA (P14024) 50S ribosomal protein L19e (ORF E)| Length = 149 Score = 90.5 bits (223), Expect = 4e-18 Identities = 43/134 (32%), Positives = 72/134 (53%) Frame = +2 Query: 62 VSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPQKIXXXX 241 + + Q+R+A++VL CG +VW+DP + ++ MA ++ +IR L+ DG I++K +K Sbjct: 1 MDVSTQRRIAAAVLDCGIDRVWVDPENLEKVKMAITKDDIRLLINDGIIVKKQEKGISSA 60 Query: 242 XXXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMYH 421 E K+KG+ G G RRG + AR P K + RE +KI++ Y Sbjct: 61 RKKEVQEQKRKGKRKGPGSRRGAKGARTPKKEKWMNTIRPLRTLLKELRENEKIERSSYR 120 Query: 422 DMYLKVKGNMFKNK 463 +Y KG F+++ Sbjct: 121 KLYRMAKGGAFRSR 134
>RL19_SULAC (O05639) 50S ribosomal protein L19e| Length = 150 Score = 67.8 bits (164), Expect = 3e-11 Identities = 43/152 (28%), Positives = 71/152 (46%), Gaps = 8/152 (5%) Frame = +2 Query: 59 MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPQKIXXX 238 M +LQ+RLA+ + G + +P + E+ A +R++I+KL+K+ +I P++ Sbjct: 1 MPEFQLQRRLAADIAGVGLNNIKFNPERLEEVEEALTREDIKKLIKERAVIVNPKR---G 57 Query: 239 XXXXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKY----REAKKID 406 E K K R G G++ G+R+ + + +Y R+ ID Sbjct: 58 ISSGRLKERKHKRRSKGEGRKHGSRKGKSGARTGDKEIWINKIRKIRRYIRWLRDNNVID 117 Query: 407 KHMYHDMYLKVKGNMFKN----KRVLMESIHK 490 KH Y +Y + KGN FKN K L + HK Sbjct: 118 KHTYRLLYKRAKGNYFKNLSDVKSYLRQMGHK 149
>RL19_AERPE (Q9YF93) 50S ribosomal protein L19e| Length = 155 Score = 65.5 bits (158), Expect = 1e-10 Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 2/132 (1%) Frame = +2 Query: 71 KLQKRLASSVLKCGKGKVWL--DPNEVNEISMANSRQNIRKLVKDGFIIRKPQKIXXXXX 244 + Q+RLA+ +L G+ ++W+ DP EI A ++ ++R L+K G I P+K Sbjct: 4 RFQRRLAAEILGVGESRIWISPDPELREEIEGAVTKADVRALIKRGVIKVLPEKGNAGHA 63 Query: 245 XXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMYHD 424 ++KGR G G+R+G ARL K R+ + ID+ Y Sbjct: 64 SKVRHLQRRKGRRRGMGRRKGVATARLDPKERWMHRIRKIRRYLRYLRDKQVIDRKTYRR 123 Query: 425 MYLKVKGNMFKN 460 +Y+ KG F++ Sbjct: 124 LYMLAKGGTFRD 135
>RL19_HALMA (P14119) 50S ribosomal protein L19e (Hmal19) (Hl24)| Length = 148 Score = 64.7 bits (156), Expect = 2e-10 Identities = 38/129 (29%), Positives = 58/129 (44%) Frame = +2 Query: 68 LKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPQKIXXXXXX 247 L QKRLA+ VL GK +VW +P +I+ A +R+++R+LV +G I K +K Sbjct: 3 LSAQKRLAADVLDVGKNRVWFNPERQGDIADAITREDVRELVDEGAIQAKDKKGNSRGRA 62 Query: 248 XXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMYHDM 427 + + G G G R+G AR +K + R+ + Y D+ Sbjct: 63 RERQKKRAYGHQKGAGSRKGKAGARQNSKEDWESRIRAQRTKLRELRDEGTLSSSQYRDL 122 Query: 428 YLKVKGNMF 454 Y K G F Sbjct: 123 YDKAGGGEF 131
>RL19E_HALSA (Q9HPB6) 50S ribosomal protein L19e| Length = 149 Score = 63.5 bits (153), Expect = 5e-10 Identities = 41/145 (28%), Positives = 63/145 (43%) Frame = +2 Query: 59 MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPQKIXXX 238 M L QKRLA+ VL G+ +VW DP+ +EI+ A +R++IR+LV DG I + + Sbjct: 1 MSDLSAQKRLAADVLDVGENRVWFDPDAQSEIADAITREDIRELVADGTIDAEDTQGNSR 60 Query: 239 XXXXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHMY 418 + G G G R+G AR K + R+ + Y Sbjct: 61 GRARERDAKESYGHKKGAGSRKGKAGARQNEKREYVAGIRAQRQQLRELRDDGTLSPAQY 120 Query: 419 HDMYLKVKGNMFKNKRVLMESIHKS 493 +MY G F + R L + ++ Sbjct: 121 REMYNMANGGEFDSVRRLTNYVEEN 145
>RL19_SULSO (Q9UX89) 50S ribosomal protein L19e| Length = 151 Score = 62.8 bits (151), Expect = 9e-10 Identities = 39/134 (29%), Positives = 62/134 (46%), Gaps = 1/134 (0%) Frame = +2 Query: 59 MVSLKLQKRLASSVLKCGKGKVWLDPNEVNEISMANSRQNIRKLVKDG-FIIRKPQKIXX 235 M +LK QKRLA+S+ G ++ + + + ++ + +R IR L+KDG I+ K I Sbjct: 1 MTNLKAQKRLAASIAGVGINRIKVVEDYIEDVQSSLTRDEIRNLIKDGKIIVLKKVGISG 60 Query: 236 XXXXXXXXEAKQKGRHSGYGKRRGTREARLPTKIXXXXXXXXXXXXXXKYREAKKIDKHM 415 + K G R+G + AR +K R+ K ID+H Sbjct: 61 GRLKERRKKRSLKSEGKKSGSRKGKKGARANSKQMWVKRVRKIRAYLKWLRDHKVIDRHT 120 Query: 416 YHDMYLKVKGNMFK 457 Y ++YLK KG +K Sbjct: 121 YRELYLKTKGGNYK 134
>NU1M_RAT (P03889) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH| dehydrogenase subunit 1) Length = 318 Score = 31.2 bits (69), Expect = 2.9 Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 9/50 (18%) Frame = -1 Query: 513 SLAFSALDLWILS---------MRTLLFLNMLPLTFRYMSWYMCLSIFFA 391 +L S LWI + + LL+ N LPLT + WY+ L IF A Sbjct: 263 TLLLSTTFLWIRASYPRFRYDQLMHLLWKNFLPLTLAFCMWYISLPIFLA 312
>NU1M_HYLLA (Q96126) NADH-ubiquinone oxidoreductase chain 1 (EC 1.6.5.3) (NADH| dehydrogenase subunit 1) Length = 318 Score = 31.2 bits (69), Expect = 2.9 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 9/51 (17%) Frame = -1 Query: 513 SLAFSALDLWILS---------MRTLLFLNMLPLTFRYMSWYMCLSIFFAS 388 +L ++L LWI + + LL+ N LPLT + WY+ LS AS Sbjct: 263 TLLLTSLFLWIRTTYPRFRYDQLMYLLWKNFLPLTLTLLMWYISLSTMIAS 313
>S35B2_CAEEL (Q8MXJ9) Adenosine 3'-phospho 5'-phosphosulfate transporter 1 (PAPS| transporter 1) Length = 425 Score = 30.8 bits (68), Expect = 3.8 Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%) Frame = -1 Query: 192 TSFRMFC-RELAMEISLTSLGSSQTLPLPHLRTLEARRFCSFSDTI 58 T F +FC R +A+ +SL L T PH+ L + SFS+TI Sbjct: 147 TQFLIFCNRIVALVLSLMILAKDWTKQPPHVPPLYVHSYTSFSNTI 192
>POLS_RUBVT (P07566) Structural polyprotein [Contains: Nucleocapsid protein C;| Membrane glycoprotein E2; Membrane glycoprotein E1] Length = 1063 Score = 30.0 bits (66), Expect = 6.5 Identities = 14/22 (63%), Positives = 15/22 (68%) Frame = +3 Query: 549 PRARQAGRGRLPGGRRDWPRAP 614 PR R+ RGR G RRDW RAP Sbjct: 59 PRRRRGNRGR--GQRRDWSRAP 78
>RR3_MESVI (Q9MUU2) Chloroplast 30S ribosomal protein S3| Length = 213 Score = 29.6 bits (65), Expect = 8.5 Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 11/47 (23%) Frame = +3 Query: 501 RRQERRPYLTSLRPSVPRARQAG--------RGRLPG---GRRDWPR 608 R QER+P+ ++R +V RA++AG GRL G R +W R Sbjct: 125 RLQERKPFRRAIRQAVQRAKRAGVQGIKIQVAGRLNGAEIARSEWVR 171 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 72,344,025 Number of Sequences: 219361 Number of extensions: 1334827 Number of successful extensions: 4422 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 4209 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4410 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6427774254 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)