Clone Information

BLAST Search Result

Clone Name	basd24b08
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	CCNL2_RAT (Q5I0H5) Cyclin-L2	73	8e-13
2	CCNL2_MOUSE (Q9JJA7) Cyclin-L2 (Cyclin Ania-6b) (Paneth cell-enh...	70	5e-12
3	CCNL1_MOUSE (Q52KE7) Cyclin-L1 (Cyclin-L) (Cyclin Ania-6a)	69	9e-12
4	CCNL1_CHICK (Q5ZJP9) Cyclin-L1	69	9e-12
5	CCNL1_RAT (Q9R1Q2) Cyclin-L1 (Cyclin-L) (Cyclin Ania-6a)	69	9e-12
6	CCNL1_HUMAN (Q9UK58) Cyclin-L1 (Cyclin-L)	69	1e-11
7	CCNL2_HUMAN (Q96S94) Cyclin-L2 (Paneth cell-enhanced expression ...	67	3e-11
8	CCNL1_XENLA (Q6GN15) Cyclin-L1	66	7e-11
9	CCNL2_XENTR (Q5BKF8) Cyclin-L2	66	1e-10
10	CCNL1_BRARE (Q7ZVX0) Cyclin-L1	65	1e-10
11	CCNK_MOUSE (O88874) Cyclin-K	40	0.004
12	CCNK_HUMAN (O75909) Cyclin-K	39	0.013
13	NCOR1_XENLA (Q8QG78) Nuclear receptor corepressor 1 (N-CoR1) (N-...	36	0.11
14	NCOR1_XENTR (Q4KKX4) Nuclear receptor corepressor 1 (N-CoR1) (N-...	35	0.14
15	NET1_YEAST (P47035) Nucleolar protein NET1	34	0.40
16	MSB2_YEAST (P32334) Protein MSB2 (Multicopy suppressor of bud em...	33	0.69
17	NOLC1_RAT (P41777) Nucleolar phosphoprotein p130 (Nucleolar 130 ...	33	0.69
18	TOP1_ARATH (P30181) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoi...	33	0.90
19	IF16_HUMAN (Q16666) Gamma-interferon-inducible protein Ifi-16 (I...	33	0.90
20	KTN1_HUMAN (Q86UP2) Kinectin (Kinesin receptor) (CG-1 antigen)	32	1.2
21	PI5KA_ARATH (Q9LMN1) Phosphatidylinositol-4-phosphate 5-kinase 1...	32	1.2
22	RYR2_HUMAN (Q92736) Ryanodine receptor 2 (Cardiac muscle-type ry...	32	1.5
23	UBR2_HUMAN (Q8IWV8) Ubiquitin-protein ligase E3 component N-reco...	32	1.5
24	VSX1_BRARE (O42250) Visual system homeobox 1 (Transcription fact...	32	2.0
25	PCDBG_PANTR (Q5DRC3) Protocadherin beta 16 precursor (PCDH-beta16)	31	2.6
26	CCNC_RAT (P39947) Cyclin-C	31	2.6
27	PCDBE_PANTR (Q5DRD5) Protocadherin beta 14 precursor (PCDH-beta14)	31	2.6
28	PCDBE_HUMAN (Q9Y5E9) Protocadherin beta 14 precursor (PCDH-beta14)	31	2.6
29	CCNC_CHICK (P55168) Cyclin-C	31	2.6
30	CCNC_HUMAN (P24863) Cyclin-C	31	2.6
31	CCNC_MOUSE (Q62447) Cyclin-C	31	2.6
32	Y2353_STAES (Q8CQQ7) Protein SE_2353	31	3.4
33	CCNT_DROME (O96433) Cyclin-T	31	3.4
34	MYC_PIG (Q29031) Myc proto-oncogene protein (c-Myc) (Transcripti...	31	3.4
35	KTN1_VULVU (O97961) Kinectin	31	3.4
36	WDHD1_XENLA (O13046) WD repeat and HMG-box DNA-binding protein 1...	30	4.5
37	APO2_ARATH (Q8W4A5) APO protein 2, chloroplast precursor (Accumu...	30	4.5
38	TGFB1_CYPCA (Q9PTQ2) Transforming growth factor beta-1 precursor...	30	4.5
39	NKRF_HUMAN (O15226) NF-kappa-B-repressing factor (NFKB-repressin...	30	4.5
40	PCDB4_HUMAN (Q9Y5E5) Protocadherin beta 4 precursor (PCDH-beta4)	30	5.8
41	OXRP_HUMAN (Q9Y4L1) 150 kDa oxygen-regulated protein precursor (...	30	5.8
42	HIS2_ARATH (O82768) Histidine biosynthesis bifunctional protein ...	30	5.8
43	VIT1_CHICK (P87498) Vitellogenin-1 precursor (Vitellogenin I) (M...	30	5.8
44	TGFB1_ONCMY (O93449) Transforming growth factor beta-1 precursor...	30	5.8
45	PCDB9_HUMAN (Q9Y5E1) Protocadherin beta 9 precursor (PCDH-beta9)...	30	5.8
46	PCDB8_PANTR (Q5DRC6) Protocadherin beta 8 precursor (PCDH-beta8)	30	5.8
47	PCDB8_HUMAN (Q9UN66) Protocadherin beta 8 precursor (PCDH-beta8)...	30	5.8
48	GRPR_MOUSE (P21729) Gastrin-releasing peptide receptor (GRP-R) (...	30	5.8
49	CCNC_DROME (P25008) G1/S-specific cyclin-C	30	5.8
50	LON_MYCGE (P47481) ATP-dependent protease La (EC 3.4.21.53)	30	7.6
51	CCNT2_HUMAN (O60583) Cyclin-T2	30	7.6
52	PRLPM_MOUSE (Q9JHK0) Placental prolactin-like protein M precurso...	30	7.6
53	PCD16_HUMAN (Q96JQ0) Protocadherin-16 precursor (Dachsous 1) (Ca...	30	7.6
54	FUTSC_DROME (Q9W596) Microtubule-associated protein futsch	30	7.6
55	DP87_DICDI (Q04503) Prespore protein DP87 precursor	30	7.6
56	FKB39_DROME (P54397) 39 kDa FK506-binding nuclear protein (EC 5....	30	7.6
57	LPIN2_HUMAN (Q92539) Lipin-2	29	10.0
58	ADA2B_BRARE (Q90WY5) Alpha-2B adrenergic receptor (Alpha-2B adre...	29	10.0
59	E74EF_DROVI (Q7M3M6) Ecdysone-induced protein 74EF (ETS-related ...	29	10.0
60	VSX2_BRARE (O42477) Visual system homeobox 2 (Transcription fact...	29	10.0
61	YL8J_SCHPO (Q9UTA1) Hypothetical zinc finger protein C25B8.19c i...	29	10.0

>CCNL2_RAT (Q5I0H5) Cyclin-L2|
          Length = 520

 Score = 72.8 bits (177), Expect = 8e-13
 Identities = 52/169 (30%), Positives = 77/169 (45%), Gaps = 11/169 (6%)
 Frame = +1

Query: 49  NLANDSLRTTLCVRFKSEVVACGVVYAAARRHRVPLPEEPPWWTVFDADEAAIQEVCRIL 228
           N  NDSLRT + VRF+ E +AC  +Y AAR   +PLP  P W+ +F A E  IQE+C  +
Sbjct: 219 NYMNDSLRTDVFVRFQPESIACACIYLAARTLEIPLPNRPHWFLLFGATEEEIQEICFKI 278

Query: 229 AHLHSLPKAQ--YIPVYKDNDSFSVRRALDTHASKESPASAVASDRGT----PVPSSSSQ 390
             L++  K    ++    +    ++  A         P SA   D  T    P P   S 
Sbjct: 279 LQLYTRKKVDLTHLESEVEKRKHAIEEAKARAKGLLPPGSAPGLDSATAGFSPAPKPESP 338

Query: 391 EKNSLTKAGREKVKENSDTKDKPLPAE----LNG-KGGQAANSKSERPE 522
           ++   +K+    VK      + P  A+    +NG   GQ + S+S   E
Sbjct: 339 KEGKGSKSSPLSVKNAKRKMEGPKKAKGDSPVNGLLKGQESRSQSRSRE 387

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>CCNL2_MOUSE (Q9JJA7) Cyclin-L2 (Cyclin Ania-6b) (Paneth cell-enhanced|
           expression protein) (PCEE)
          Length = 518

 Score = 70.1 bits (170), Expect = 5e-12
 Identities = 50/158 (31%), Positives = 71/158 (44%)
 Frame = +1

Query: 49  NLANDSLRTTLCVRFKSEVVACGVVYAAARRHRVPLPEEPPWWTVFDADEAAIQEVCRIL 228
           N  NDSLRT + VRF+ E +AC  +Y AAR   +PLP  P W+ +F A E  IQE+C  +
Sbjct: 219 NYMNDSLRTDVFVRFQPESIACACIYLAARTLEIPLPNRPHWFLLFGATEEEIQEICFKI 278

Query: 229 AHLHSLPKAQYIPVYKDNDSFSVRRALDTHASKESPASAVASDRGTPVPSSSSQEKNSLT 408
             L++  K     +  + +          HA +E+ A A     GT     S+   +   
Sbjct: 279 LQLYTRKKVDLTHLESEVEK-------RKHAIEEAKARAKGLLPGTAPGLDSAAGFSPAP 331

Query: 409 KAGREKVKENSDTKDKPLPAELNGKGGQAANSKSERPE 522
           K   E  KE    K  P         G++A  K E P+
Sbjct: 332 KL--ESPKEGKGGKPSP-------PSGKSAKRKMEGPK 360

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>CCNL1_MOUSE (Q52KE7) Cyclin-L1 (Cyclin-L) (Cyclin Ania-6a)|
          Length = 532

 Score = 69.3 bits (168), Expect = 9e-12
 Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 9/165 (5%)
 Frame = +1

Query: 49  NLANDSLRTTLCVRFKSEVVACGVVYAAARRHRVPLPEEPPWWTVFDADEAAIQEVCRIL 228
           N  NDSLRT + VRF+ E +AC  +Y AAR  ++PLP  P W+ +F   E  IQE+C   
Sbjct: 232 NYMNDSLRTNVFVRFQPETIACACIYLAARALQIPLPTRPHWFLLFGTTEEEIQEICIET 291

Query: 229 AHLHSLPKAQYIPVYKDNDSFSVR------RALDTHASKESPASAVASDRGTPVPSSSSQ 390
             L++  K  Y  + K+ +   V       +A   +       S +        PSS  +
Sbjct: 292 LRLYTRKKPNYELLEKEVEKRKVALQEAKLKAKGLNLDGTPALSTLGGFSPASKPSSPRE 351

Query: 391 ---EKNSLTKAGREKVKENSDTKDKPLPAELNGKGGQAANSKSER 516
              E+ S      + VK+  + + +   +  NG    +  S++ R
Sbjct: 352 VKAEEKSPVSINVKTVKKEPEDRQQASKSPYNGVRKDSKRSRTSR 396

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>CCNL1_CHICK (Q5ZJP9) Cyclin-L1|
          Length = 534

 Score = 69.3 bits (168), Expect = 9e-12
 Identities = 50/142 (35%), Positives = 70/142 (49%), Gaps = 1/142 (0%)
 Frame = +1

Query: 49  NLANDSLRTTLCVRFKSEVVACGVVYAAARRHRVPLPEEPPWWTVFDADEAAIQEVCRIL 228
           N  NDSLRT + VRF+ E +AC  +Y AAR   +PLP  P W+ +F   E  IQE+C  +
Sbjct: 232 NYMNDSLRTDVFVRFQPESIACACIYLAARTLEIPLPNRPHWFLLFGTTEEEIQEICLKI 291

Query: 229 AHLHSLPKAQYIPVYKDNDSFSVRRALDTHASKESPASAVA-SDRGTPVPSSSSQEKNSL 405
             L++  K        D +S   ++ L   A +E+ A A      G PV  ++S   + L
Sbjct: 292 LQLYTRKKVD----LSDLESKIEKKKL---AIEEAKAQAKGLLPEGAPVLDNTS-GFSPL 343

Query: 406 TKAGREKVKENSDTKDKPLPAE 471
            K   E  KE    K  PLP +
Sbjct: 344 PK--NESPKEVKGNKPSPLPVQ 363

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>CCNL1_RAT (Q9R1Q2) Cyclin-L1 (Cyclin-L) (Cyclin Ania-6a)|
          Length = 527

 Score = 69.3 bits (168), Expect = 9e-12
 Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 9/165 (5%)
 Frame = +1

Query: 49  NLANDSLRTTLCVRFKSEVVACGVVYAAARRHRVPLPEEPPWWTVFDADEAAIQEVCRIL 228
           N  NDSLRT + VRF+ E +AC  +Y AAR  ++PLP  P W+ +F   E  IQE+C   
Sbjct: 227 NYMNDSLRTNVFVRFQPETIACACIYLAARALQIPLPTRPHWFLLFGTTEEEIQEICIET 286

Query: 229 AHLHSLPKAQYIPVYKDNDSFSVR------RALDTHASKESPASAVASDRGTPVPSSSSQ 390
             L++  K  Y  + K+ +   V       +A   +       S +        PSS  +
Sbjct: 287 LRLYTRKKPNYELLEKEVEKRKVALQEAKLKAKGLNLDGTPALSTLGGFSPASKPSSPRE 346

Query: 391 ---EKNSLTKAGREKVKENSDTKDKPLPAELNGKGGQAANSKSER 516
              E+ S      + VK+  + + +   +  NG    +  S++ R
Sbjct: 347 VKAEEKSPVSINVKTVKKEPEDRQQASKSPYNGVRKDSKRSRNSR 391

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>CCNL1_HUMAN (Q9UK58) Cyclin-L1 (Cyclin-L)|
          Length = 526

 Score = 68.9 bits (167), Expect = 1e-11
 Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 9/165 (5%)
 Frame = +1

Query: 49  NLANDSLRTTLCVRFKSEVVACGVVYAAARRHRVPLPEEPPWWTVFDADEAAIQEVCRIL 228
           N  NDSLRT + VRF+ E +AC  +Y AAR  ++PLP  P W+ +F   E  IQE+C   
Sbjct: 226 NYMNDSLRTNVFVRFQPETIACACIYLAARALQIPLPTRPHWFLLFGTTEEEIQEICIET 285

Query: 229 AHLHSLPKAQYIPVYKDNDSFSVR------RALDTHASKESPASAVASDRGTPVPSSSSQ 390
             L++  K  Y  + K+ +   V       +A   +       S +        PSS  +
Sbjct: 286 LRLYTRKKPNYELLEKEVEKRKVALQEAKLKAKGLNPDGTPALSTLGGFSPASKPSSPRE 345

Query: 391 ---EKNSLTKAGREKVKENSDTKDKPLPAELNGKGGQAANSKSER 516
              E+ S      + VK+  + + +   +  NG    +  S++ R
Sbjct: 346 VKAEEKSPISINVKTVKKEPEDRQQASKSPYNGVRKDSKRSRNSR 390

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>CCNL2_HUMAN (Q96S94) Cyclin-L2 (Paneth cell-enhanced expression protein)|
          Length = 520

 Score = 67.4 bits (163), Expect = 3e-11
 Identities = 31/68 (45%), Positives = 42/68 (61%)
 Frame = +1

Query: 49  NLANDSLRTTLCVRFKSEVVACGVVYAAARRHRVPLPEEPPWWTVFDADEAAIQEVCRIL 228
           N  NDSLRT + VRF+ E +AC  +Y AAR   +PLP  P W+ +F A E  IQE+C  +
Sbjct: 221 NYMNDSLRTDVFVRFQPESIACACIYLAARTLEIPLPNRPHWFLLFGATEEEIQEICLKI 280

Query: 229 AHLHSLPK 252
             L++  K
Sbjct: 281 LQLYARKK 288

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>CCNL1_XENLA (Q6GN15) Cyclin-L1|
          Length = 496

 Score = 66.2 bits (160), Expect = 7e-11
 Identities = 46/140 (32%), Positives = 60/140 (42%), Gaps = 6/140 (4%)
 Frame = +1

Query: 49  NLANDSLRTTLCVRFKSEVVACGVVYAAARRHRVPLPEEPPWWTVFDADEAAIQEVCRIL 228
           N  ND LRT + VRF +E +AC  +Y AAR  ++ LP  P W+ +F A E  IQ++C   
Sbjct: 206 NYMNDCLRTNVFVRFDAETIACACIYLAARALQLSLPNRPHWFLLFGATEENIQDICITT 265

Query: 229 AHLHSLPKAQYIPVYKDNDSFSV---RRALDTHASKESPASAVASDRG---TPVPSSSSQ 390
             L+S  K  Y  + K+ D   V      L           A+ S  G      PSS   
Sbjct: 266 LRLYSRIKPNYEFLEKEVDKRKVALQEAKLKAKGLNPDGTPAILSMGGFSPASKPSSPRD 325

Query: 391 EKNSLTKAGREKVKENSDTK 450
            K         KVK   D K
Sbjct: 326 VKTEEKSPNFAKVKREMDDK 345

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>CCNL2_XENTR (Q5BKF8) Cyclin-L2|
          Length = 497

 Score = 65.9 bits (159), Expect = 1e-10
 Identities = 30/69 (43%), Positives = 42/69 (60%)
 Frame = +1

Query: 49  NLANDSLRTTLCVRFKSEVVACGVVYAAARRHRVPLPEEPPWWTVFDADEAAIQEVCRIL 228
           N  NDSLRT + VRF  E +AC  ++ AAR   +PLP  P W+ +F A E  I+E+C  +
Sbjct: 199 NYMNDSLRTDVFVRFNPETIACACIFLAARTLEIPLPNRPHWFYLFGASEEDIKEICLQI 258

Query: 229 AHLHSLPKA 255
             L++  KA
Sbjct: 259 LRLYTRKKA 267

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>CCNL1_BRARE (Q7ZVX0) Cyclin-L1|
          Length = 498

 Score = 65.5 bits (158), Expect = 1e-10
 Identities = 50/177 (28%), Positives = 77/177 (43%), Gaps = 17/177 (9%)
 Frame = +1

Query: 49  NLANDSLRTTLCVRFKSEVVACGVVYAAARRHRVPLPEEPPWWTVFDADEAAIQEVCRIL 228
           N  ND+LRT+  VRF+ E +AC  +Y AAR  ++PLP +P W+ +F A +  I+E+C   
Sbjct: 205 NYMNDALRTSAFVRFEPETIACACIYLAARVLQIPLPSKPHWFLLFGATKEDIKEICINT 264

Query: 229 AHLHSLPKAQYIPVYKDNDS---FSVRRALDTHASKESPASAVASDRGTPVPS--SSSQE 393
             L+S  K     + +  +    F     L       +   A+AS  G    S  SS ++
Sbjct: 265 MKLYSREKPHSEQLERQVEKRKIFLEEARLKARGQNPNGTPALASINGFSPASKPSSPRD 324

Query: 394 KNSLTKAGREKVKE------------NSDTKDKPLPAELNGKGGQAANSKSERPEPN 528
                K+   K+KE            N   K +      NGK    + S+S    P+
Sbjct: 325 VKMDDKSPNSKLKEPENRQLFAKSPLNGSIKKEDGKVFQNGKNHSRSRSRSTSRSPH 381

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>CCNK_MOUSE (O88874) Cyclin-K|
          Length = 554

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 39/166 (23%), Positives = 68/166 (40%), Gaps = 10/166 (6%)
 Frame = +1

Query: 58  NDSLRTTLCVRFKSEVVACGVVYAAARRHRVPL------PEEPPWWTVF--DADEAAIQE 213
           NDSL TTL ++++ E++A  V+Y A R  +  +      P    WW  F  D     +++
Sbjct: 190 NDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQDVPVDVLED 249

Query: 214 VCRILAHLHSLPKAQYIPVYKDNDSFSVRRALDTHASKESPAS--AVASDRGTPVPSSSS 387
           +C  +  L+S  K Q +P +  +          T    + P S  +  S+   P P   S
Sbjct: 250 ICHQILDLYSQGK-QQMPHHTPHQLQQPPSLQPTPQVPQGPQSQPSQGSEAAQP-PQKDS 307

Query: 388 QEKNSLTKAGREKVKENSDTKDKPLPAELNGKGGQAANSKSERPEP 525
           Q+     +   ++ K+ S     P  A+          +K+  P P
Sbjct: 308 QQSAQQQQQQAQQPKKPSPQPSPPRQAKRAVVVSPKEENKATEPPP 353

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>CCNK_HUMAN (O75909) Cyclin-K|
          Length = 357

 Score = 38.9 bits (89), Expect = 0.013
 Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 8/75 (10%)
 Frame = +1

Query: 58  NDSLRTTLCVRFKSEVVACGVVYAAARRHRVPL------PEEPPWWTVF--DADEAAIQE 213
           NDSL TTL ++++ E++A  V+Y A R  +  +      P    WW  F  D     +++
Sbjct: 190 NDSLCTTLSLQWEPEIIAVAVMYLAGRLCKFEIQEWTSKPMYRRWWEQFVQDVPVDVLED 249

Query: 214 VCRILAHLHSLPKAQ 258
           +C  +  L+S  K Q
Sbjct: 250 ICHQILDLYSQGKQQ 264

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>NCOR1_XENLA (Q8QG78) Nuclear receptor corepressor 1 (N-CoR1) (N-CoR) (xN-CoR)|
          Length = 2498

 Score = 35.8 bits (81), Expect = 0.11
 Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
 Frame = +1

Query: 235  LHSLPKAQYIP-VYKDNDSFSVRRALDTHASKESPASAVASDRGTPVPSSSSQEKNSLTK 411
            LH   K+Q  P +Y+DN++        +  S+ SP +  A    TP  SSS + K++LT 
Sbjct: 1519 LHEASKSQLSPGIYEDNNARRTPVNYPSPMSRSSPMARSAEGCLTPSKSSSHERKSTLTP 1578

Query: 412  AGREKV 429
              RE +
Sbjct: 1579 TQRESI 1584

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>NCOR1_XENTR (Q4KKX4) Nuclear receptor corepressor 1 (N-CoR1) (N-CoR) (xN-CoR)|
          Length = 2494

 Score = 35.4 bits (80), Expect = 0.14
 Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
 Frame = +1

Query: 235  LHSLPKAQYIP-VYKDNDSFSVRRALDTHASKESPASAVASDRGTPVPSSSSQEKNSLTK 411
            LH   K+Q  P VY+DN++        +  S+ SP +  A    TP  SSS + K++LT 
Sbjct: 1522 LHEASKSQLSPGVYEDNNARRTPVNYPSPMSRSSPMARSAEVGLTPGKSSSHERKSTLTP 1581

Query: 412  AGREKV 429
              RE +
Sbjct: 1582 TQRENI 1587

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>NET1_YEAST (P47035) Nucleolar protein NET1|
          Length = 1189

 Score = 33.9 bits (76), Expect = 0.40
 Identities = 20/81 (24%), Positives = 33/81 (40%)
 Frame = +1

Query: 232 HLHSLPKAQYIPVYKDNDSFSVRRALDTHASKESPASAVASDRGTPVPSSSSQEKNSLTK 411
           HL  LPKA    + K ++  S  +  +    ++S    +   +    PS   + K     
Sbjct: 463 HLAELPKASNTSITKSSNGESWGKQQEHQPPRKSSLETIVEKKSQAEPSGIVEPKRMTNF 522

Query: 412 AGREKVKENSDTKDKPLPAEL 474
               +V+E  DT DK L  E+
Sbjct: 523 LDDNQVREKEDTNDKLLEKEI 543

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>MSB2_YEAST (P32334) Protein MSB2 (Multicopy suppressor of bud emergence 2)|
          Length = 1306

 Score = 33.1 bits (74), Expect = 0.69
 Identities = 21/67 (31%), Positives = 31/67 (46%)
 Frame = +1

Query: 241 SLPKAQYIPVYKDNDSFSVRRALDTHASKESPASAVASDRGTPVPSSSSQEKNSLTKAGR 420
           S+ +    PV     S SV +  DT     S  S+V+    TPVPS+SS+   S T +  
Sbjct: 764 SVSQVSDTPVSYTTSSSSVSQVSDTSVPSTSSRSSVSQVSDTPVPSTSSRSSVSQTSSSL 823

Query: 421 EKVKENS 441
           +    +S
Sbjct: 824 QPTTTSS 830

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>NOLC1_RAT (P41777) Nucleolar phosphoprotein p130 (Nucleolar 130 kDa protein)|
           (140 kDa nucleolar phosphoprotein) (Nopp140) (Nucleolar
           and coiled-body phosphoprotein 1)
          Length = 704

 Score = 33.1 bits (74), Expect = 0.69
 Identities = 29/101 (28%), Positives = 41/101 (40%), Gaps = 19/101 (18%)
 Frame = +1

Query: 283 DSFSVRRALDTHASKESP--------ASAVASDRGTPVPS----SSSQEKNSLTKAGREK 426
           DS S   +  +   K++P        A+  A  + TPV      SSS   +S   +  EK
Sbjct: 477 DSSSDSESSSSEEEKKTPPKPPAKKKAAGAAVPKPTPVKKAAAESSSSSSSSEDSSEEEK 536

Query: 427 VKENSDTKDKP-------LPAELNGKGGQAANSKSERPEPN 528
            K  S    KP       +PA  NGK G+ +  + E  E N
Sbjct: 537 KKPKSKATPKPQAGKANGVPASQNGKAGKESEEEEEDTEQN 577

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>TOP1_ARATH (P30181) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)|
          Length = 916

 Score = 32.7 bits (73), Expect = 0.90
 Identities = 21/83 (25%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
 Frame = +1

Query: 280 NDSFSVRRALDTHASKESPA-SAVASDRGTPVPSSSSQEKNSLTKAGREKVKENSDTKDK 456
           N +  V+ ++ + +SK SPA S + +D  + V   S  +K+        K++      D+
Sbjct: 71  NKTSIVKSSMPSSSSKASPAKSPLRNDMPSTVKDRSQLQKDQ----SECKIEHEDSEDDR 126

Query: 457 PLPAELNGKGGQAANSKSERPEP 525
           PL + L+G  G  ++ +   P+P
Sbjct: 127 PLSSILSGNKGPTSSRQVSSPQP 149

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>IF16_HUMAN (Q16666) Gamma-interferon-inducible protein Ifi-16|
           (Interferon-inducible myeloid differentiation
           transcriptional activator) (IFI 16)
          Length = 785

 Score = 32.7 bits (73), Expect = 0.90
 Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
 Frame = +1

Query: 286 SFSVRRALDTHASKESPA--SAVASDRGTPVPSSSSQEKNSLTKAGREKVKENSDTKDKP 459
           + S +R  + HA+  +P+  S V ++     P +  ++K++  KAG +  K + +    P
Sbjct: 93  ALSRKRKKEVHATSPAPSTSSTVKTEGAEATPGAQKRKKSTKEKAGPKGSKVSEEQTQPP 152

Query: 460 LPAELNGKGGQAANSKSERPE 522
            PA   G G   A  +S  P+
Sbjct: 153 SPA---GAGMSTAMGRSPSPK 170

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>KTN1_HUMAN (Q86UP2) Kinectin (Kinesin receptor) (CG-1 antigen)|
          Length = 1357

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 28/95 (29%), Positives = 41/95 (43%), Gaps = 23/95 (24%)
 Frame = +1

Query: 307 LDTHASKESPASAVASDRGTPV-----PSSSSQEKNSLTKAGREKVKENSDTKDK----- 456
           L+    KES AS +   +  PV     P+  S+   S  K G++K K  SD +DK     
Sbjct: 125 LEEQVIKESDASKIPGKKVEPVPVTKQPTPPSEAAASKKKPGQKKSKNGSDDQDKKVETL 184

Query: 457 ----------PLPAEL---NGKGGQAANSKSERPE 522
                     PL  E    +G G + A+SK ++ E
Sbjct: 185 MVPSKRQEALPLHQETKQESGSGKKKASSKKQKTE 219

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>PI5KA_ARATH (Q9LMN1) Phosphatidylinositol-4-phosphate 5-kinase 10 (EC 2.7.1.68)|
           (AtPIP5K10) (1-phosphatidylinositol-4-phosphate kinase
           10) (PtdIns(4)P-5-kinase 10) (Diphosphoinositide kinase
           10)
          Length = 427

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 22/74 (29%), Positives = 37/74 (50%)
 Frame = +1

Query: 256 QYIPVYKDNDSFSVRRALDTHASKESPASAVASDRGTPVPSSSSQEKNSLTKAGREKVKE 435
           + IPVY   DSF+ R ++D+++SK    ++ + DR +    S +  +NS+       V  
Sbjct: 237 ELIPVY---DSFTSRGSVDSNSSKFMKTASNSPDRSSSTMYSCTPSRNSVD--SENSVNI 291

Query: 436 NSDTKDKPLPAELN 477
            S     P PA+ N
Sbjct: 292 QSVASISPSPAQTN 305

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>RYR2_HUMAN (Q92736) Ryanodine receptor 2 (Cardiac muscle-type ryanodine|
            receptor) (RyR2) (RYR-2) (Cardiac muscle ryanodine
            receptor-calcium release channel) (hRYR-2)
          Length = 4967

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 19/61 (31%), Positives = 29/61 (47%)
 Frame = +1

Query: 331  SPASAVASDRGTPVPSSSSQEKNSLTKAGREKVKENSDTKDKPLPAELNGKGGQAANSKS 510
            +P + ++     PVP    QEK    KA  E+ +E  +TK +P  AE  G+ G+      
Sbjct: 4397 NPNAGLSDLMSNPVPMPEVQEKFQEQKAKEEEKEEKEETKSEPEKAE--GEDGEKEEKAK 4454

Query: 511  E 513
            E
Sbjct: 4455 E 4455

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>UBR2_HUMAN (Q8IWV8) Ubiquitin-protein ligase E3 component N-recognin-2 (EC|
            6.-.-.-) (Ubiquitin-protein ligase E3-alpha-2)
            (Ubiquitin-protein ligase E3-alpha-II)
          Length = 1755

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
 Frame = +1

Query: 223  ILAHLHSLPKAQYIPVYKDNDSFSVRRALDTHASKE-SPASAVASDRGTPVPSSSSQEKN 399
            ILA L +L  A Y+ V+KD   + ++        +E SP S VA   GT +   SS++K+
Sbjct: 969  ILAMLETLQNAPYLEVHKDMIRWILKTFNAVKKMRESSPTSPVAETEGT-IMEESSRDKD 1027

Query: 400  SLTKAGREKVKENSDTKDKPLPAELN 477
               KA R++  E +  + + + A+++
Sbjct: 1028 ---KAERKRKAEIARLRREKIMAQMS 1050

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>VSX1_BRARE (O42250) Visual system homeobox 1 (Transcription factor VSX1)|
          Length = 344

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 31/134 (23%), Positives = 60/134 (44%), Gaps = 13/134 (9%)
 Frame = +1

Query: 94  KSEVVACGVVYAAARRHRVPLPEEPPWWTVFDADEAAIQEVCRIL-----AHLHS----- 243
           +S V+A   +Y A  RH +PLPE     ++ ++ ++ +   C        A +H      
Sbjct: 215 RSSVMAEYGLYGAMVRHSIPLPE-----SIINSAKSGMMGSCAPWLLGEPAGMHKKSMEI 269

Query: 244 LPKAQYIPVYKDNDSFSVR---RALDTHASKESPASAVASDRGTPVPSSSSQEKNSLTKA 414
           + KA   P    +D++S     +  DT  S  +  +  + D    + S+S QE  S  K 
Sbjct: 270 VKKAPGTPESTHSDTYSEEHKGKDSDTTWSSGANGADDSEDMAIDLSSTSKQENKSTLKR 329

Query: 415 GREKVKENSDTKDK 456
              + + +SD++++
Sbjct: 330 SPPRTENSSDSENE 343

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>PCDBG_PANTR (Q5DRC3) Protocadherin beta 16 precursor (PCDH-beta16)|
          Length = 795

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = +1

Query: 244 LPKAQYIPVYKDNDSFSVRRALDTHASKESPASAVASDRGTPVPSSSS 387
           LP A  + +  DN      R+LD  A +E      A+DRG+P  SS +
Sbjct: 498 LPLASLVSINTDNGHLFALRSLDYEALQEFEFRVGATDRGSPALSSEA 545

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>CCNC_RAT (P39947) Cyclin-C|
          Length = 298

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 24/117 (20%), Positives = 45/117 (38%)
 Frame = +1

Query: 52  LANDSLRTTLCVRFKSEVVACGVVYAAARRHRVPLPEEPPWWTVFDADEAAIQEVCRILA 231
           + ND+ RT LC+ +   ++A   ++ A     V   +   W+     D   I E+ R++ 
Sbjct: 194 IVNDTYRTDLCLLYPPFMIALACLHVAC---VVQQKDARQWFAELSVDMEKILEIIRVI- 249

Query: 232 HLHSLPKAQYIPVYKDNDSFSVRRALDTHASKESPASAVASDRGTPVPSSSSQEKNS 402
                     + +Y+   +F  R+ + T  SK        +  G   P+ S     S
Sbjct: 250 ----------LKLYEQWKNFDERKEMATILSKMPKPKPPPNSEGEQGPNGSQNSSYS 296

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>PCDBE_PANTR (Q5DRD5) Protocadherin beta 14 precursor (PCDH-beta14)|
          Length = 798

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = +1

Query: 244 LPKAQYIPVYKDNDSFSVRRALDTHASKESPASAVASDRGTPVPSSSS 387
           LP A  + +  DN      R+LD  A +E      A+DRG+P  SS +
Sbjct: 498 LPLASLVSINADNGHLFALRSLDYEALQEFEFRVGATDRGSPALSSEA 545

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>PCDBE_HUMAN (Q9Y5E9) Protocadherin beta 14 precursor (PCDH-beta14)|
          Length = 798

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 17/48 (35%), Positives = 24/48 (50%)
 Frame = +1

Query: 244 LPKAQYIPVYKDNDSFSVRRALDTHASKESPASAVASDRGTPVPSSSS 387
           LP A  + +  DN      R+LD  A +E      A+DRG+P  SS +
Sbjct: 498 LPLASLVSINADNGHLFALRSLDYEALQEFEFRVGATDRGSPALSSEA 545

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>CCNC_CHICK (P55168) Cyclin-C|
          Length = 283

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 24/117 (20%), Positives = 45/117 (38%)
 Frame = +1

Query: 52  LANDSLRTTLCVRFKSEVVACGVVYAAARRHRVPLPEEPPWWTVFDADEAAIQEVCRILA 231
           + ND+ RT LC+ +   ++A   ++ A     V   +   W+     D   I E+ R++ 
Sbjct: 179 IVNDTYRTDLCLLYPPFMIALACLHVAC---VVQQKDARQWFAELSVDMEKILEIIRVI- 234

Query: 232 HLHSLPKAQYIPVYKDNDSFSVRRALDTHASKESPASAVASDRGTPVPSSSSQEKNS 402
                     + +Y+   +F  R+ + T  SK        +  G   P+ S     S
Sbjct: 235 ----------LKLYEQWKNFDERKEMATILSKMPKPKPPPNSEGEQGPNGSQNSSYS 281

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>CCNC_HUMAN (P24863) Cyclin-C|
          Length = 303

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 24/117 (20%), Positives = 45/117 (38%)
 Frame = +1

Query: 52  LANDSLRTTLCVRFKSEVVACGVVYAAARRHRVPLPEEPPWWTVFDADEAAIQEVCRILA 231
           + ND+ RT LC+ +   ++A   ++ A     V   +   W+     D   I E+ R++ 
Sbjct: 199 IVNDTYRTDLCLLYPPFMIALACLHVAC---VVQQKDARQWFAELSVDMEKILEIIRVI- 254

Query: 232 HLHSLPKAQYIPVYKDNDSFSVRRALDTHASKESPASAVASDRGTPVPSSSSQEKNS 402
                     + +Y+   +F  R+ + T  SK        +  G   P+ S     S
Sbjct: 255 ----------LKLYEQWKNFDERKEMATILSKMPKPKPPPNSEGEQGPNGSQNSSYS 301

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>CCNC_MOUSE (Q62447) Cyclin-C|
          Length = 304

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 24/117 (20%), Positives = 45/117 (38%)
 Frame = +1

Query: 52  LANDSLRTTLCVRFKSEVVACGVVYAAARRHRVPLPEEPPWWTVFDADEAAIQEVCRILA 231
           + ND+ RT LC+ +   ++A   ++ A     V   +   W+     D   I E+ R++ 
Sbjct: 200 IVNDTYRTDLCLLYPPFMIALACLHVAC---VVQQKDARQWFAELSVDMEKILEIIRVI- 255

Query: 232 HLHSLPKAQYIPVYKDNDSFSVRRALDTHASKESPASAVASDRGTPVPSSSSQEKNS 402
                     + +Y+   +F  R+ + T  SK        +  G   P+ S     S
Sbjct: 256 ----------LKLYEQWKNFDERKEMATILSKMPKPKPPPNSEGEQGPNGSQNSSYS 302

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>Y2353_STAES (Q8CQQ7) Protein SE_2353|
          Length = 300

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 26/109 (23%), Positives = 49/109 (44%)
 Frame = +1

Query: 187 DADEAAIQEVCRILAHLHSLPKAQYIPVYKDNDSFSVRRALDTHASKESPASAVASDRGT 366
           +A ++A ++  + +A  + L  ++ +  + D+ S S   +    AS+ + AS   S+   
Sbjct: 157 EAIQSAQEQQSKDIAKANELKDSE-LRSHFDSMSNSASISQSNVASQSTTASLSQSESAN 215

Query: 367 PVPSSSSQEKNSLTKAGREKVKENSDTKDKPLPAELNGKGGQAANSKSE 513
              SSS  E NS+T       K   ++K       L+  G  + + KSE
Sbjct: 216 DSMSSSLSESNSITSESNTNSKSEIESKSTSTSEFLSESGSVSNSEKSE 264

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>CCNT_DROME (O96433) Cyclin-T|
          Length = 1097

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 14/38 (36%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
 Frame = +1

Query: 52  LANDSLR-TTLCVRFKSEVVACGVVYAAARRHRVPLPE 162
           LA++SL  T++C++++  VVAC  +Y A +  R  +P+
Sbjct: 204 LASNSLHLTSMCLQYRPTVVACFCIYLACKWSRWEIPQ 241

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>MYC_PIG (Q29031) Myc proto-oncogene protein (c-Myc) (Transcription factor|
           p64)
          Length = 439

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 12/95 (12%)
 Frame = +1

Query: 271 YKDNDSFSVRRALDTHASKESPAS------AVASDRGTPVPSSSSQEKNSLTKAGREKVK 432
           Y  NDS S +      ++  SP+S      A +S RG+P P +  +E    T +  E+ +
Sbjct: 197 YPLNDSSSPKPCASPDSTAFSPSSDSLLSSAESSPRGSPEPLALHEETPPTTSSDSEEEQ 256

Query: 433 ENSDTKD------KPLPAELNGKGGQAANSKSERP 519
           E+ +  D      +  PA+ +  G  +A   S+ P
Sbjct: 257 EDEEEIDVVSVEKRQPPAKRSESGSPSAGGHSKPP 291

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>KTN1_VULVU (O97961) Kinectin|
          Length = 1330

 Score = 30.8 bits (68), Expect = 3.4
 Identities = 26/95 (27%), Positives = 40/95 (42%), Gaps = 23/95 (24%)
 Frame = +1

Query: 307 LDTHASKESPASAVASDRGTPV-----PSSSSQEKNSLTKAGREKVKENSDTKDK----- 456
           L+   +KES  S +   +  PV     P+  S+   S  K G++K K  SD +DK     
Sbjct: 125 LEEQVTKESDVSKIPGKKVEPVPVTKQPTPPSEAAASKKKPGQKKSKNGSDDQDKKVETL 184

Query: 457 ----------PLPAEL---NGKGGQAANSKSERPE 522
                     PL  E    +G G +  +SK ++ E
Sbjct: 185 MAPSKKQESLPLQQETKQESGSGKKKVSSKKQKAE 219

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>WDHD1_XENLA (O13046) WD repeat and HMG-box DNA-binding protein 1 (Acidic|
            nucleoplasmic DNA-binding protein 1) (And-1)
          Length = 1127

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 19/69 (27%), Positives = 31/69 (44%)
 Frame = +1

Query: 319  ASKESPASAVASDRGTPVPSSSSQEKNSLTKAGREKVKENSDTKDKPLPAELNGKGGQAA 498
            AS++SPA A  S R T +  +  +     + +G     ++     KPL  +   K GQA 
Sbjct: 919  ASQKSPAFASNSSRSTSILDNMGKFPRKPSASGSPSTSKSDSVIIKPLAPKAKSKQGQAT 978

Query: 499  NSKSERPEP 525
               S + +P
Sbjct: 979  LFHSVQAKP 987

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>APO2_ARATH (Q8W4A5) APO protein 2, chloroplast precursor (Accumulation of|
           photosystem I protein 2)
          Length = 440

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +1

Query: 403 LTKAGREKVKENSDTKDKPLPAELNG 480
           L +A RE+VK N D   +PLP   NG
Sbjct: 102 LRRAARERVKNNKDKPKRPLPPPKNG 127

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>TGFB1_CYPCA (Q9PTQ2) Transforming growth factor beta-1 precursor (TGF-beta-1)|
          Length = 376

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 18/58 (31%), Positives = 30/58 (51%)
 Frame = +2

Query: 452 ISRCLLS*MEKEARQQIRRVKGQSLM*TVLRKEKEVDQEAVTVILGVEILITRGSVIE 625
           +S C    +E   R++I  ++GQ L    L KE EVD+E  +  +  E++    S +E
Sbjct: 23  LSTCSPLDLELIKRKRIEAIRGQILSKLRLSKEPEVDEEKESQNIPAELISVYNSTVE 80

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>NKRF_HUMAN (O15226) NF-kappa-B-repressing factor (NFKB-repressing factor)|
           (Transcription factor NRF) (ITBA4 protein)
          Length = 690

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 10/67 (14%)
 Frame = +1

Query: 232 HLHSLPKAQYIPVYKD--NDSFSVRRALDTHA-------SKESPASA-VASDRGTPVPSS 381
           H  S+P+     +Y+D   DSFS++     +        +K+ P +A +  D G P PS+
Sbjct: 88  HFASMPR----DIYQDYTQDSFSIQDGNSQYCDSSGFILTKDQPVTANMYFDSGNPAPST 143

Query: 382 SSQEKNS 402
           +SQ+ NS
Sbjct: 144 TSQQANS 150

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>PCDB4_HUMAN (Q9Y5E5) Protocadherin beta 4 precursor (PCDH-beta4)|
          Length = 795

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 17/48 (35%), Positives = 23/48 (47%)
 Frame = +1

Query: 244 LPKAQYIPVYKDNDSFSVRRALDTHASKESPASAVASDRGTPVPSSSS 387
           LP A  + +  DN      R+LD  A +       ASDRG+P  SS +
Sbjct: 497 LPLASLVSINADNGHLFALRSLDYEALQAFEFRVGASDRGSPALSSEA 544

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>OXRP_HUMAN (Q9Y4L1) 150 kDa oxygen-regulated protein precursor (Orp150) (Hypoxia|
            up-regulated 1)
          Length = 999

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 19/55 (34%), Positives = 29/55 (52%)
 Frame = +1

Query: 328  ESPASAVASDRGTPVPSSSSQEKNSLTKAGREKVKENSDTKDKPLPAELNGKGGQ 492
            E P +A ASD+G  V   + Q +++   +  EKV+  S+  D   P EL G G +
Sbjct: 927  EPPLNASASDQGEKVIPPAGQTEDAEPISEPEKVETGSEPGDTE-PLELGGPGAE 980

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>HIS2_ARATH (O82768) Histidine biosynthesis bifunctional protein hisIE,|
           chloroplast precursor [Includes: Phosphoribosyl-AMP
           cyclohydrolase (EC 3.5.4.19) (PRA-CH);
           Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31)
           (PRA-PH)]
          Length = 281

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 15/50 (30%), Positives = 21/50 (42%)
 Frame = -3

Query: 252 LWEAVQVSKNSANFLNCCLISIKDCPPRRLFWEGDPVPPSCSIHNSACYY 103
           LW   + S N  N L+  +    DC    + + G P  P+C      CYY
Sbjct: 109 LWTKGETSNNFINILDVYV----DCDRDSIIYLGTPDGPTCHTGEETCYY 154

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>VIT1_CHICK (P87498) Vitellogenin-1 precursor (Vitellogenin I) (Minor|
            vitellogenin) [Contains: Lipovitellin-1 (Lipovitellin I)
            (LVI); Phosvitin (PV); Lipovitellin-2 (Lipovitellin II)
            (LVII); YGP42]
          Length = 1912

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 18/65 (27%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
 Frame = +1

Query: 319  ASKESPASAVASDRGTPVPSSSSQEKNSLTKAGREKVKENSDTKD-KPLPAELNGKGGQA 495
            +S+ S +S  +S   +   SSSS+ K+S   +   +   +S++KD     ++ N KG  +
Sbjct: 1172 SSRSSSSSDSSSSSSSSSSSSSSKSKSSSRSSKSNRSSSSSNSKDSSSSSSKSNSKGSSS 1231

Query: 496  ANSKS 510
            ++SK+
Sbjct: 1232 SSSKA 1236

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>TGFB1_ONCMY (O93449) Transforming growth factor beta-1 precursor (TGF-beta-1)|
          Length = 382

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 18/58 (31%), Positives = 29/58 (50%)
 Frame = +2

Query: 452 ISRCLLS*MEKEARQQIRRVKGQSLM*TVLRKEKEVDQEAVTVILGVEILITRGSVIE 625
           +S C    +E   R++I  ++GQ L    L KE E+DQE  T  +   ++    S +E
Sbjct: 23  MSTCKSLDLELVKRKRIEAIRGQILSKLRLPKEPEIDQEGDTEEVPASLMSIYNSTVE 80

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>PCDB9_HUMAN (Q9Y5E1) Protocadherin beta 9 precursor (PCDH-beta9) (Protocadherin|
           3H)
          Length = 797

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 17/48 (35%), Positives = 23/48 (47%)
 Frame = +1

Query: 244 LPKAQYIPVYKDNDSFSVRRALDTHASKESPASAVASDRGTPVPSSSS 387
           LP A  + +  DN      R+LD  A +       ASDRG+P  SS +
Sbjct: 498 LPLASLVSINADNGHLFALRSLDYEALQAFDFRVGASDRGSPALSSEA 545

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>PCDB8_PANTR (Q5DRC6) Protocadherin beta 8 precursor (PCDH-beta8)|
          Length = 801

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 17/48 (35%), Positives = 23/48 (47%)
 Frame = +1

Query: 244 LPKAQYIPVYKDNDSFSVRRALDTHASKESPASAVASDRGTPVPSSSS 387
           LP A  + +  DN      R+LD  A +       ASDRG+P  SS +
Sbjct: 499 LPLASLVSINTDNGHLFALRSLDYEALQAFEFRVGASDRGSPALSSEA 546

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>PCDB8_HUMAN (Q9UN66) Protocadherin beta 8 precursor (PCDH-beta8) (Protocadherin|
           3I)
          Length = 801

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 17/48 (35%), Positives = 23/48 (47%)
 Frame = +1

Query: 244 LPKAQYIPVYKDNDSFSVRRALDTHASKESPASAVASDRGTPVPSSSS 387
           LP A  + +  DN      R+LD  A +       ASDRG+P  SS +
Sbjct: 499 LPLASLVSINTDNGHLFALRSLDYEALQAFEFRVGASDRGSPALSSEA 546

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>GRPR_MOUSE (P21729) Gastrin-releasing peptide receptor (GRP-R) (GRP-preferring|
           bombesin receptor)
          Length = 384

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 13/31 (41%), Positives = 20/31 (64%)
 Frame = -1

Query: 179 VHQGGSSGRGTRCLLAAAYTTPHATTSLLNR 87
           +++  S+GR T C+ +   T P AT SL+NR
Sbjct: 346 MNRSHSTGRSTTCMTSFKSTNPSATFSLINR 376

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>CCNC_DROME (P25008) G1/S-specific cyclin-C|
          Length = 267

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
 Frame = +1

Query: 52  LANDSLRTTLCVRFKSEVVACGVVYAAARRHRVPLPEE--PPWWTVFDADEAAIQEVCRI 225
           + NDSLRT +C+ +    +A   +  A     V L ++    W+   + D   +QE+ R 
Sbjct: 179 IVNDSLRTDVCLLYPPYQIAIACLQIAC----VILQKDATKQWFAELNVDLDKVQEIVRA 234

Query: 226 LAHLHSLPK 252
           + +L+ L K
Sbjct: 235 IVNLYELWK 243

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>LON_MYCGE (P47481) ATP-dependent protease La (EC 3.4.21.53)|
          Length = 795

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 20/69 (28%), Positives = 36/69 (52%), Gaps = 9/69 (13%)
 Frame = +1

Query: 274 KDNDSFSVRRALDTHASKESPASAVASDRGTPVPSSSSQEKNSLTKA---------GREK 426
           K+++  S+R+ LD +   E+    + S+      SSSS ++++LTK            +K
Sbjct: 270 KEDEVASIRKKLDENPYPEAIKKRILSELEHYENSSSSSQESTLTKTYIDTLLNLPWWQK 329

Query: 427 VKENSDTKD 453
            K+NSD K+
Sbjct: 330 SKDNSDVKN 338

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>CCNT2_HUMAN (O60583) Cyclin-T2|
          Length = 730

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
 Frame = +1

Query: 52  LANDSLR-TTLCVRFKSEVVACGVVYAAARRHRVPLP---EEPPWWTVFD 189
           +A +SL  TT C+++K  V+AC  ++ A +     +P   +   WW   D
Sbjct: 176 MATNSLHLTTFCLQYKPTVIACVCIHLACKWSNWEIPVSTDGKHWWEYVD 225

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>PRLPM_MOUSE (Q9JHK0) Placental prolactin-like protein M precursor (PRL-like|
           protein M) (PLP-M)
          Length = 228

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = -3

Query: 204 CCLISIKDCPPRRLFWEGDPVPPSCSIHNSACY 106
           CC   I       L WE + V P CS+ N  C+
Sbjct: 9   CCRTLILLLVSNLLLWESEAVLPICSVRNGRCF 41

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>PCD16_HUMAN (Q96JQ0) Protocadherin-16 precursor (Dachsous 1) (Cadherin-19)|
            (Fibroblast cadherin 1)
          Length = 3298

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
 Frame = +1

Query: 121  VYAAARRHRVPLPEEP-PWWTVFDADEAAIQEVCRILAHLHSLPKAQYIPVYKDNDSFSV 297
            V+A+  R R+P  + P P      A +  + E  R+   L S     +  ++    + SV
Sbjct: 1545 VFASPSRVRLPEDQPPGPAALHVVARDPDLGEAARVSYRLASGGDGHF-RLHSSTGALSV 1603

Query: 298  RRALDTHASKESPASAVASDRGTPVPSSSSQ 390
             R LD     E   + VASD G+P P S++Q
Sbjct: 1604 VRPLDREQRAEHVLTVVASDHGSP-PRSATQ 1633

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>FUTSC_DROME (Q9W596) Microtubule-associated protein futsch|
          Length = 5412

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 20/83 (24%), Positives = 37/83 (44%)
 Frame = +1

Query: 274  KDNDSFSVRRALDTHASKESPASAVASDRGTPVPSSSSQEKNSLTKAGREKVKENSDTKD 453
            KD    S   +     +++SP +++ + R T V  S   E    T+  +E+ +  S T+ 
Sbjct: 3847 KDEADKSKEESRRESGAEKSPLASMEASRPTSVAESVKDE----TEKSKEESRRESVTEK 3902

Query: 454  KPLPAELNGKGGQAANSKSERPE 522
             PLP++   +    A S  +  E
Sbjct: 3903 SPLPSKEASRPTSVAESVKDEAE 3925

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>DP87_DICDI (Q04503) Prespore protein DP87 precursor|
          Length = 555

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 19/73 (26%), Positives = 35/73 (47%)
 Frame = +1

Query: 292 SVRRALDTHASKESPASAVASDRGTPVPSSSSQEKNSLTKAGREKVKENSDTKDKPLPAE 471
           S   + D+ A+  SP+S+ AS   +  PSSS+   ++ + A       +S +   P  + 
Sbjct: 477 SAASSADSSAASSSPSSSAASSAASSEPSSSAASSSAPSSASSS--APSSASSSAPSSSA 534

Query: 472 LNGKGGQAANSKS 510
            +     AA+S+S
Sbjct: 535 SSSAASSAASSES 547

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>FKB39_DROME (P54397) 39 kDa FK506-binding nuclear protein (EC 5.2.1.8)|
           (Peptidyl-prolyl cis-trans isomerase) (PPIase)
           (Rotamase)
          Length = 357

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 18/72 (25%), Positives = 32/72 (44%)
 Frame = +1

Query: 310 DTHASKESPASAVASDRGTPVPSSSSQEKNSLTKAGREKVKENSDTKDKPLPAELNGKGG 489
           D+ A +E P + VA          S +E+N + K  +E+ K+    K+KP   +   K  
Sbjct: 177 DSEAEEEQPKAKVAKLSPGASAKKSGKEQNGVAK--KEEAKQQQKKKEKPEAKKEQPKAK 234

Query: 490 QAANSKSERPEP 525
           + A  +    +P
Sbjct: 235 EPAKQQPASKDP 246

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>LPIN2_HUMAN (Q92539) Lipin-2|
          Length = 896

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 30/112 (26%), Positives = 47/112 (41%), Gaps = 7/112 (6%)
 Frame = +1

Query: 196 EAAIQEVCRILAHLHSLPKAQYIPVYKDNDSFSVRRALDTHASKESPASAVASDRGTPVP 375
           E   +E  ++ A+L + P       +KD D+  V+   D   S+ S  S V        P
Sbjct: 90  EETEEEYEKLPAYLATSPIPTEDQFFKDIDTPLVKSGGDETPSQSSDISHVLETETIFTP 149

Query: 376 SSSSQEKNSLTKAGREKVKEN-------SDTKDKPLPAELNGKGGQAANSKS 510
           SS  ++K    K  ++  KE         DT D  + ++ + KG QAA   S
Sbjct: 150 SSVKKKKRRRKKYKQDSKKEEQAASAAAEDTCDVGVSSD-DDKGAQAARGSS 200

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>ADA2B_BRARE (Q90WY5) Alpha-2B adrenergic receptor (Alpha-2B adrenoceptor)|
           (Alpha-2B adrenoreceptor) (Alpha(2B)AR)
          Length = 510

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 18/53 (33%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
 Frame = +1

Query: 364 TPVPSSSSQEKNSLTKAGRE--KVKENSDTKDKPLPAELNGKGGQAANSKSER 516
           +P PS+SS+   S +K G++  K K+N+  K+K  P   NG+   +++S +E+
Sbjct: 313 SPSPSNSSEVAPSKSKEGKKEKKKKKNNKNKNKKEPDNNNGE-SMSSDSDTEQ 364

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>E74EF_DROVI (Q7M3M6) Ecdysone-induced protein 74EF (ETS-related protein E74A)|
          Length = 873

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
 Frame = +1

Query: 310 DTHASKESPASAVASDRGTPVPSSSSQEKNSLTKAGREKVKENSDTK--DKPLPAELNGK 483
           DTH++  + A+A A+     V SSSS    +++ AG + V +   T   +  L   L   
Sbjct: 689 DTHSTIANAAAAAAAAAAASVVSSSSGRSGAISVAGSQSVIQQPATSSVNYDLSYMLELG 748

Query: 484 GGQAANSKSER 516
           G Q A +K  R
Sbjct: 749 GFQQAKAKKPR 759

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>VSX2_BRARE (O42477) Visual system homeobox 2 (Transcription factor VSX2)|
           (Homeobox protein ALX)
          Length = 395

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 33/135 (24%), Positives = 56/135 (41%), Gaps = 19/135 (14%)
 Frame = +1

Query: 94  KSEVVACGVVYAAARRHRVPLP--------------EEPPWW--TVFDADEAAIQEVCR- 222
           +S V+A   +Y A  RH +PLP              E PP++  ++  + +  I + C  
Sbjct: 231 RSSVMAEYGLYGAMVRHSIPLPVQDGFPTTSCFSKHEYPPFFAESILKSAKDGIMDSCAP 290

Query: 223 --ILAHLHSLPKAQYIPVYKDNDSFSVRRALDTHASKESPASAVASDRGTPVPSSSSQEK 396
             +  H  SL  A     ++ N+   V +      +   P  A A +R T  P S  + +
Sbjct: 291 WLLGMHKKSLETAG----HQSNEKSDVTQT----PTNPKPDEAEAEERRTESPMSKEELR 342

Query: 397 NSLTKAGREKVKENS 441
            +   A R K +E+S
Sbjct: 343 ENSIAALRAKAQEHS 357

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>YL8J_SCHPO (Q9UTA1) Hypothetical zinc finger protein C25B8.19c in chromosome I|
          Length = 522

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 19/63 (30%), Positives = 31/63 (49%)
 Frame = +1

Query: 298 RRALDTHASKESPASAVASDRGTPVPSSSSQEKNSLTKAGREKVKENSDTKDKPLPAELN 477
           ++A D  A+  S ++ V+  R TP P   +   N+ T +   +  EN+ T    +PA LN
Sbjct: 57  QKAFDPQAATVSESANVS--RPTPAPVPPAGNTNTPTTSNSNQNLENNVTSAASMPAILN 114

Query: 478 GKG 486
             G
Sbjct: 115 AAG 117


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.311    0.127    0.370 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,678,521
Number of Sequences: 219361
Number of extensions: 1652025
Number of successful extensions: 4177
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 3973
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4159
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5767334219
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result