ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd24b04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_507580.1| PREDICTED Oryza sativa (japonica cultivar-group... 212 9e-52
2ref|XM_482105.1| Oryza sativa (japonica cultivar-group), mRNA 212 9e-52
3ref|XM_507214.2| PREDICTED Oryza sativa (japonica cultivar-group... 212 9e-52
4dbj|AK109433.2| Oryza sativa (japonica cultivar-group) cDNA clon... 212 9e-52
5dbj|AK104318.1| Oryza sativa (japonica cultivar-group) cDNA clon... 212 9e-52
6dbj|AK069608.1| Oryza sativa (japonica cultivar-group) cDNA clon... 212 9e-52
7dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 129 1e-26
8dbj|AP004675.3| Oryza sativa (japonica cultivar-group) genomic D... 129 1e-26
9dbj|AP005443.3| Oryza sativa (japonica cultivar-group) genomic D... 129 1e-26
10dbj|AK119345.1| Oryza sativa (japonica cultivar-group) cDNA clon... 129 1e-26
11dbj|AK112013.1| Oryza sativa (japonica cultivar-group) cDNA clon... 84 6e-13
12dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 48 0.031
13gb|AC009471.5| Homo sapiens BAC clone RP11-168K7 from 2, complet... 44 0.48
14emb|CR931997.1| Corynebacterium jeikeium K411 complete genome 42 1.9
15ref|XM_809374.1| Trypanosoma cruzi strain CL Brener hypothetical... 42 1.9
16ref|XM_962834.1| PREDICTED: Tribolium castaneum similar to CG112... 42 1.9
17gb|CP000088.1| Thermobifida fusca YX, complete genome 42 1.9
18emb|BX569692.1| Synechococcus sp. WH8102 complete genome; segmen... 42 1.9
19dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.9
20ref|XM_315706.2| Anopheles gambiae str. PEST ENSANGP00000016480 ... 42 1.9
21gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.9
22emb|AL772426.5|CNS08CA4 Oryza sativa chromosome 12, . BAC OJ1310... 42 1.9
23ref|NM_022469.3| Homo sapiens gremlin 2, cysteine knot superfami... 40 7.5
24ref|XM_525111.1| PREDICTED: Pan troglodytes similar to gremlin 2... 40 7.5
25ref|XM_470860.1| Oryza sativa (japonica cultivar-group), predic... 40 7.5
26gb|BT018785.1| Zea mays clone EL01N0527F04.d mRNA sequence 40 7.5
27gb|AF326781.1| Triticum monococcum actin (ACT-1) gene, partial c... 40 7.5
28gb|AC079853.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.5
29gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome 40 7.5
30gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 40 7.5
31ref|XM_869700.1| PREDICTED: Bos taurus similar to splicing facto... 40 7.5
32gb|AC126608.20| Mus musculus chromosome 19, clone RP24-166L20, c... 40 7.5
33gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 7.5
34emb|AJ298054.1|MMA298054 Mus musculus Ly57 gene for lymphocyte a... 40 7.5
35ref|XM_447784.1| Candida glabrata CBS138, CAGL0J01771g partial mRNA 40 7.5
36gb|AC117253.3| Mus musculus BAC clone RP24-405A12 from chromosom... 40 7.5
37gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome 40 7.5
38emb|AL445483.13| Human DNA sequence from clone RP11-92G12 on chr... 40 7.5
39emb|AL358176.22| Human DNA sequence from clone RP11-467I20 on ch... 40 7.5
40emb|AL353588.25| Human DNA sequence from clone RP11-444E17 on ch... 40 7.5
41emb|CR380956.1| Candida glabrata strain CBS138 chromosome J comp... 40 7.5
42gb|BC046632.1| Homo sapiens gremlin 2, cysteine knot superfamily... 40 7.5
43emb|AL645948.10| Mouse DNA sequence from clone RP23-298M7 on chr... 40 7.5
44gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 7.5
45dbj|AB206256.1| Cupriavidus necator phaZd gene for intracellular... 40 7.5
46gb|AF232751.1| Mycobacterium avium subsp. paratuberculosis major... 40 7.5
47gb|AF319998.1|AF319998 Stigmatella aurantiaca myxalamid biosynth... 40 7.5
48dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.5
49gb|AE004817.1| Pseudomonas aeruginosa PAO1, section 378 of 529 o... 40 7.5
50gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 7.5
51gb|AY724229.1| Uncultured bacterium clone DUNnos247 (+1C) (nosOT... 40 7.5
52gb|AY724226.1| Uncultured bacterium clone DUNnos245 (+1C) (nosOT... 40 7.5
53gb|AE005090.1| Halobacterium sp. NRC-1 section 121 of 170 of the... 40 7.5
54dbj|AK120906.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.5
55dbj|AK120483.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.5
56dbj|AK024848.1| Homo sapiens cDNA: FLJ21195 fis, clone COL00185 40 7.5
57ref|XM_310912.2| Anopheles gambiae str. PEST ENSANGP00000012793 ... 40 7.5
58emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 7.5
59gb|AY913117.1| Uncultured forest soil bacterium clone DUNnos246 ... 40 7.5
60gb|AY105724.1| Zea mays PCO149105 mRNA sequence 40 7.5
61gb|AF147448.1|AF147448 Pseudomonas aeruginosa strain PAO1 penici... 40 7.5
62gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 7.5
63emb|AJ628955.2| Streptomyces rimosus subsp. paromomycinus genomi... 40 7.5
64emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB1... 40 7.5 
>ref|XM_507580.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0011E04.125
           mRNA
          Length = 1513

 Score =  212 bits (107), Expect = 9e-52
 Identities = 281/339 (82%)
 Strand = Plus / Plus

                                                                       
Query: 214 cccgggacgatgaaggcttgggcgtacgaggagtatggggacgccagcgtgctcaagctc 273
           |||| |||||||||||| ||||||||||| || || ||||||| ||||||||||||||||
Sbjct: 406 cccgcgacgatgaaggcgtgggcgtacgacgattacggggacggcagcgtgctcaagctc 465

                                                                       
Query: 274 gacgaggacgtgtcggtgccggcggtgggcgaggaccaggtgctggtgaaggtggcggcc 333
            |||| | || | |||||||||   | | ||| |||||||||||||||   || || |||
Sbjct: 466 aacgacgccgcggcggtgccggacatcgccgacgaccaggtgctggtgcgcgtcgccgcc 525

                                                                       
Query: 334 gcggcgctcaaccccgttgattccaagcggcgcatgggcaagttcaaggccaccgactcc 393
           || |||||||||||||| ||  ||||||| |||   ||||||||||||||||||||||||
Sbjct: 526 gccgcgctcaaccccgtcgacgccaagcgccgcgccggcaagttcaaggccaccgactcc 585

                                                                       
Query: 394 ccactcccgactgtgccagggtacgacatggccggagtcgtcgtcaaggtcggcagccag 453
           || |||||||| ||||| ||||||||| ||||||| || || || |||| ||| ||  ||
Sbjct: 586 cctctcccgacggtgccggggtacgacgtggccggcgtggtggtgaaggccgggaggaag 645

                                                                       
Query: 454 gtaaagaacctcaaggagggcgacgaggtgtacggccacatcagcgagaaggtcctcgag 513
           || |||   || ||||| || ||||||||||||||| |||||||||||||||  || |||
Sbjct: 646 gtgaaggggctgaaggaaggggacgaggtgtacggcaacatcagcgagaaggcgctggag 705

                                                  
Query: 514 ggtcccaaacagttcggctcgctggcggagtacaccgcc 552
           || ||||| ||||  || |||||||||||||||||||||
Sbjct: 706 gggcccaagcagtcggggtcgctggcggagtacaccgcc 744
to top
>ref|XM_482105.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1392

 Score =  212 bits (107), Expect = 9e-52
 Identities = 281/339 (82%)
 Strand = Plus / Plus

                                                                       
Query: 214 cccgggacgatgaaggcttgggcgtacgaggagtatggggacgccagcgtgctcaagctc 273
           |||| |||||||||||| ||||||||||| || || ||||||| ||||||||||||||||
Sbjct: 249 cccgcgacgatgaaggcgtgggcgtacgacgattacggggacggcagcgtgctcaagctc 308

                                                                       
Query: 274 gacgaggacgtgtcggtgccggcggtgggcgaggaccaggtgctggtgaaggtggcggcc 333
            |||| | || | |||||||||   | | ||| |||||||||||||||   || || |||
Sbjct: 309 aacgacgccgcggcggtgccggacatcgccgacgaccaggtgctggtgcgcgtcgccgcc 368

                                                                       
Query: 334 gcggcgctcaaccccgttgattccaagcggcgcatgggcaagttcaaggccaccgactcc 393
           || |||||||||||||| ||  ||||||| |||   ||||||||||||||||||||||||
Sbjct: 369 gccgcgctcaaccccgtcgacgccaagcgccgcgccggcaagttcaaggccaccgactcc 428

                                                                       
Query: 394 ccactcccgactgtgccagggtacgacatggccggagtcgtcgtcaaggtcggcagccag 453
           || |||||||| ||||| ||||||||| ||||||| || || || |||| ||| ||  ||
Sbjct: 429 cctctcccgacggtgccggggtacgacgtggccggcgtggtggtgaaggccgggaggaag 488

                                                                       
Query: 454 gtaaagaacctcaaggagggcgacgaggtgtacggccacatcagcgagaaggtcctcgag 513
           || |||   || ||||| || ||||||||||||||| |||||||||||||||  || |||
Sbjct: 489 gtgaaggggctgaaggaaggggacgaggtgtacggcaacatcagcgagaaggcgctggag 548

                                                  
Query: 514 ggtcccaaacagttcggctcgctggcggagtacaccgcc 552
           || ||||| ||||  || |||||||||||||||||||||
Sbjct: 549 gggcccaagcagtcggggtcgctggcggagtacaccgcc 587
to top
>ref|XM_507214.2| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0011E04.125
           mRNA
          Length = 1510

 Score =  212 bits (107), Expect = 9e-52
 Identities = 281/339 (82%)
 Strand = Plus / Plus

                                                                       
Query: 214 cccgggacgatgaaggcttgggcgtacgaggagtatggggacgccagcgtgctcaagctc 273
           |||| |||||||||||| ||||||||||| || || ||||||| ||||||||||||||||
Sbjct: 294 cccgcgacgatgaaggcgtgggcgtacgacgattacggggacggcagcgtgctcaagctc 353

                                                                       
Query: 274 gacgaggacgtgtcggtgccggcggtgggcgaggaccaggtgctggtgaaggtggcggcc 333
            |||| | || | |||||||||   | | ||| |||||||||||||||   || || |||
Sbjct: 354 aacgacgccgcggcggtgccggacatcgccgacgaccaggtgctggtgcgcgtcgccgcc 413

                                                                       
Query: 334 gcggcgctcaaccccgttgattccaagcggcgcatgggcaagttcaaggccaccgactcc 393
           || |||||||||||||| ||  ||||||| |||   ||||||||||||||||||||||||
Sbjct: 414 gccgcgctcaaccccgtcgacgccaagcgccgcgccggcaagttcaaggccaccgactcc 473

                                                                       
Query: 394 ccactcccgactgtgccagggtacgacatggccggagtcgtcgtcaaggtcggcagccag 453
           || |||||||| ||||| ||||||||| ||||||| || || || |||| ||| ||  ||
Sbjct: 474 cctctcccgacggtgccggggtacgacgtggccggcgtggtggtgaaggccgggaggaag 533

                                                                       
Query: 454 gtaaagaacctcaaggagggcgacgaggtgtacggccacatcagcgagaaggtcctcgag 513
           || |||   || ||||| || ||||||||||||||| |||||||||||||||  || |||
Sbjct: 534 gtgaaggggctgaaggaaggggacgaggtgtacggcaacatcagcgagaaggcgctggag 593

                                                  
Query: 514 ggtcccaaacagttcggctcgctggcggagtacaccgcc 552
           || ||||| ||||  || |||||||||||||||||||||
Sbjct: 594 gggcccaagcagtcggggtcgctggcggagtacaccgcc 632
to top
>dbj|AK109433.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-C06, full
           insert sequence
          Length = 1503

 Score =  212 bits (107), Expect = 9e-52
 Identities = 281/339 (82%)
 Strand = Plus / Plus

                                                                       
Query: 214 cccgggacgatgaaggcttgggcgtacgaggagtatggggacgccagcgtgctcaagctc 273
           |||| |||||||||||| ||||||||||| || || ||||||| ||||||||||||||||
Sbjct: 400 cccgcgacgatgaaggcgtgggcgtacgacgattacggggacggcagcgtgctcaagctc 459

                                                                       
Query: 274 gacgaggacgtgtcggtgccggcggtgggcgaggaccaggtgctggtgaaggtggcggcc 333
            |||| | || | |||||||||   | | ||| |||||||||||||||   || || |||
Sbjct: 460 aacgacgccgcggcggtgccggacatcgccgacgaccaggtgctggtgcgcgtcgccgcc 519

                                                                       
Query: 334 gcggcgctcaaccccgttgattccaagcggcgcatgggcaagttcaaggccaccgactcc 393
           || |||||||||||||| ||  ||||||| |||   ||||||||||||||||||||||||
Sbjct: 520 gccgcgctcaaccccgtcgacgccaagcgccgcgccggcaagttcaaggccaccgactcc 579

                                                                       
Query: 394 ccactcccgactgtgccagggtacgacatggccggagtcgtcgtcaaggtcggcagccag 453
           || |||||||| ||||| ||||||||| ||||||| || || || |||| ||| ||  ||
Sbjct: 580 cctctcccgacggtgccggggtacgacgtggccggcgtggtggtgaaggccgggaggaag 639

                                                                       
Query: 454 gtaaagaacctcaaggagggcgacgaggtgtacggccacatcagcgagaaggtcctcgag 513
           || |||   || ||||| || ||||||||||||||| |||||||||||||||  || |||
Sbjct: 640 gtgaaggggctgaaggaaggggacgaggtgtacggcaacatcagcgagaaggcgctggag 699

                                                  
Query: 514 ggtcccaaacagttcggctcgctggcggagtacaccgcc 552
           || ||||| ||||  || |||||||||||||||||||||
Sbjct: 700 gggcccaagcagtcggggtcgctggcggagtacaccgcc 738
to top
>dbj|AK104318.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-D02, full
           insert sequence
          Length = 1392

 Score =  212 bits (107), Expect = 9e-52
 Identities = 281/339 (82%)
 Strand = Plus / Plus

                                                                       
Query: 214 cccgggacgatgaaggcttgggcgtacgaggagtatggggacgccagcgtgctcaagctc 273
           |||| |||||||||||| ||||||||||| || || ||||||| ||||||||||||||||
Sbjct: 249 cccgcgacgatgaaggcgtgggcgtacgacgattacggggacggcagcgtgctcaagctc 308

                                                                       
Query: 274 gacgaggacgtgtcggtgccggcggtgggcgaggaccaggtgctggtgaaggtggcggcc 333
            |||| | || | |||||||||   | | ||| |||||||||||||||   || || |||
Sbjct: 309 aacgacgccgcggcggtgccggacatcgccgacgaccaggtgctggtgcgcgtcgccgcc 368

                                                                       
Query: 334 gcggcgctcaaccccgttgattccaagcggcgcatgggcaagttcaaggccaccgactcc 393
           || |||||||||||||| ||  ||||||| |||   ||||||||||||||||||||||||
Sbjct: 369 gccgcgctcaaccccgtcgacgccaagcgccgcgccggcaagttcaaggccaccgactcc 428

                                                                       
Query: 394 ccactcccgactgtgccagggtacgacatggccggagtcgtcgtcaaggtcggcagccag 453
           || |||||||| ||||| ||||||||| ||||||| || || || |||| ||| ||  ||
Sbjct: 429 cctctcccgacggtgccggggtacgacgtggccggcgtggtggtgaaggccgggaggaag 488

                                                                       
Query: 454 gtaaagaacctcaaggagggcgacgaggtgtacggccacatcagcgagaaggtcctcgag 513
           || |||   || ||||| || ||||||||||||||| |||||||||||||||  || |||
Sbjct: 489 gtgaaggggctgaaggaaggggacgaggtgtacggcaacatcagcgagaaggcgctggag 548

                                                  
Query: 514 ggtcccaaacagttcggctcgctggcggagtacaccgcc 552
           || ||||| ||||  || |||||||||||||||||||||
Sbjct: 549 gggcccaagcagtcggggtcgctggcggagtacaccgcc 587
to top
>dbj|AK069608.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019N13, full
           insert sequence
          Length = 1510

 Score =  212 bits (107), Expect = 9e-52
 Identities = 281/339 (82%)
 Strand = Plus / Plus

                                                                       
Query: 214 cccgggacgatgaaggcttgggcgtacgaggagtatggggacgccagcgtgctcaagctc 273
           |||| |||||||||||| ||||||||||| || || ||||||| ||||||||||||||||
Sbjct: 294 cccgcgacgatgaaggcgtgggcgtacgacgattacggggacggcagcgtgctcaagctc 353

                                                                       
Query: 274 gacgaggacgtgtcggtgccggcggtgggcgaggaccaggtgctggtgaaggtggcggcc 333
            |||| | || | |||||||||   | | ||| |||||||||||||||   || || |||
Sbjct: 354 aacgacgccgcggcggtgccggacatcgccgacgaccaggtgctggtgcgcgtcgccgcc 413

                                                                       
Query: 334 gcggcgctcaaccccgttgattccaagcggcgcatgggcaagttcaaggccaccgactcc 393
           || |||||||||||||| ||  ||||||| |||   ||||||||||||||||||||||||
Sbjct: 414 gccgcgctcaaccccgtcgacgccaagcgccgcgccggcaagttcaaggccaccgactcc 473

                                                                       
Query: 394 ccactcccgactgtgccagggtacgacatggccggagtcgtcgtcaaggtcggcagccag 453
           || |||||||| ||||| ||||||||| ||||||| || || || |||| ||| ||  ||
Sbjct: 474 cctctcccgacggtgccggggtacgacgtggccggcgtggtggtgaaggccgggaggaag 533

                                                                       
Query: 454 gtaaagaacctcaaggagggcgacgaggtgtacggccacatcagcgagaaggtcctcgag 513
           || |||   || ||||| || ||||||||||||||| |||||||||||||||  || |||
Sbjct: 534 gtgaaggggctgaaggaaggggacgaggtgtacggcaacatcagcgagaaggcgctggag 593

                                                  
Query: 514 ggtcccaaacagttcggctcgctggcggagtacaccgcc 552
           || ||||| ||||  || |||||||||||||||||||||
Sbjct: 594 gggcccaagcagtcggggtcgctggcggagtacaccgcc 632
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  129 bits (65), Expect = 1e-26
 Identities = 158/189 (83%)
 Strand = Plus / Minus

                                                                            
Query: 214      cccgggacgatgaaggcttgggcgtacgaggagtatggggacgccagcgtgctcaagctc 273
                |||| |||||||||||| ||||||||||| || || ||||||| ||||||||||||||||
Sbjct: 17849975 cccgcgacgatgaaggcgtgggcgtacgacgattacggggacggcagcgtgctcaagctc 17849916

                                                                            
Query: 274      gacgaggacgtgtcggtgccggcggtgggcgaggaccaggtgctggtgaaggtggcggcc 333
                 |||| | || | |||||||||   | | ||| |||||||||||||||   || || |||
Sbjct: 17849915 aacgacgccgcggcggtgccggacatcgccgacgaccaggtgctggtgcgcgtcgccgcc 17849856

                                                                            
Query: 334      gcggcgctcaaccccgttgattccaagcggcgcatgggcaagttcaaggccaccgactcc 393
                || |||||||||||||| ||  ||||||| |||   ||||||||||||||||||||||||
Sbjct: 17849855 gccgcgctcaaccccgtcgacgccaagcgccgcgccggcaagttcaaggccaccgactcc 17849796

                         
Query: 394      ccactcccg 402
                || ||||||
Sbjct: 17849795 cctctcccg 17849787



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 76/87 (87%)
 Strand = Plus / Minus

                                                                            
Query: 466      aaggagggcgacgaggtgtacggccacatcagcgagaaggtcctcgagggtcccaaacag 525
                ||||| || ||||||||||||||| |||||||||||||||  || ||||| ||||| |||
Sbjct: 17849628 aaggaaggggacgaggtgtacggcaacatcagcgagaaggcgctggaggggcccaagcag 17849569

                                           
Query: 526      ttcggctcgctggcggagtacaccgcc 552
                |  || |||||||||||||||||||||
Sbjct: 17849568 tcggggtcgctggcggagtacaccgcc 17849542
to top
>dbj|AP004675.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0709D11
          Length = 146856

 Score =  129 bits (65), Expect = 1e-26
 Identities = 158/189 (83%)
 Strand = Plus / Minus

                                                                         
Query: 214   cccgggacgatgaaggcttgggcgtacgaggagtatggggacgccagcgtgctcaagctc 273
             |||| |||||||||||| ||||||||||| || || ||||||| ||||||||||||||||
Sbjct: 71481 cccgcgacgatgaaggcgtgggcgtacgacgattacggggacggcagcgtgctcaagctc 71422

                                                                         
Query: 274   gacgaggacgtgtcggtgccggcggtgggcgaggaccaggtgctggtgaaggtggcggcc 333
              |||| | || | |||||||||   | | ||| |||||||||||||||   || || |||
Sbjct: 71421 aacgacgccgcggcggtgccggacatcgccgacgaccaggtgctggtgcgcgtcgccgcc 71362

                                                                         
Query: 334   gcggcgctcaaccccgttgattccaagcggcgcatgggcaagttcaaggccaccgactcc 393
             || |||||||||||||| ||  ||||||| |||   ||||||||||||||||||||||||
Sbjct: 71361 gccgcgctcaaccccgtcgacgccaagcgccgcgccggcaagttcaaggccaccgactcc 71302

                      
Query: 394   ccactcccg 402
             || ||||||
Sbjct: 71301 cctctcccg 71293



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 76/87 (87%)
 Strand = Plus / Minus

                                                                         
Query: 466   aaggagggcgacgaggtgtacggccacatcagcgagaaggtcctcgagggtcccaaacag 525
             ||||| || ||||||||||||||| |||||||||||||||  || ||||| ||||| |||
Sbjct: 71134 aaggaaggggacgaggtgtacggcaacatcagcgagaaggcgctggaggggcccaagcag 71075

                                        
Query: 526   ttcggctcgctggcggagtacaccgcc 552
             |  || |||||||||||||||||||||
Sbjct: 71074 tcggggtcgctggcggagtacaccgcc 71048
to top
>dbj|AP005443.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBb0011E04
          Length = 136767

 Score =  129 bits (65), Expect = 1e-26
 Identities = 158/189 (83%)
 Strand = Plus / Minus

                                                                          
Query: 214    cccgggacgatgaaggcttgggcgtacgaggagtatggggacgccagcgtgctcaagctc 273
              |||| |||||||||||| ||||||||||| || || ||||||| ||||||||||||||||
Sbjct: 124369 cccgcgacgatgaaggcgtgggcgtacgacgattacggggacggcagcgtgctcaagctc 124310

                                                                          
Query: 274    gacgaggacgtgtcggtgccggcggtgggcgaggaccaggtgctggtgaaggtggcggcc 333
               |||| | || | |||||||||   | | ||| |||||||||||||||   || || |||
Sbjct: 124309 aacgacgccgcggcggtgccggacatcgccgacgaccaggtgctggtgcgcgtcgccgcc 124250

                                                                          
Query: 334    gcggcgctcaaccccgttgattccaagcggcgcatgggcaagttcaaggccaccgactcc 393
              || |||||||||||||| ||  ||||||| |||   ||||||||||||||||||||||||
Sbjct: 124249 gccgcgctcaaccccgtcgacgccaagcgccgcgccggcaagttcaaggccaccgactcc 124190

                       
Query: 394    ccactcccg 402
              || ||||||
Sbjct: 124189 cctctcccg 124181



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 76/87 (87%)
 Strand = Plus / Minus

                                                                          
Query: 466    aaggagggcgacgaggtgtacggccacatcagcgagaaggtcctcgagggtcccaaacag 525
              ||||| || ||||||||||||||| |||||||||||||||  || ||||| ||||| |||
Sbjct: 124022 aaggaaggggacgaggtgtacggcaacatcagcgagaaggcgctggaggggcccaagcag 123963

                                         
Query: 526    ttcggctcgctggcggagtacaccgcc 552
              |  || |||||||||||||||||||||
Sbjct: 123962 tcggggtcgctggcggagtacaccgcc 123936
to top
>dbj|AK119345.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-131-E02, full
            insert sequence
          Length = 2944

 Score =  129 bits (65), Expect = 1e-26
 Identities = 158/189 (83%)
 Strand = Plus / Minus

                                                                        
Query: 214  cccgggacgatgaaggcttgggcgtacgaggagtatggggacgccagcgtgctcaagctc 273
            |||| |||||||||||| ||||||||||| || || ||||||| ||||||||||||||||
Sbjct: 2435 cccgcgacgatgaaggcgtgggcgtacgacgattacggggacggcagcgtgctcaagctc 2376

                                                                        
Query: 274  gacgaggacgtgtcggtgccggcggtgggcgaggaccaggtgctggtgaaggtggcggcc 333
             |||| | || | |||||||||   | | ||| |||||||||||||||   || || |||
Sbjct: 2375 aacgacgccgcggcggtgccggacatcgccgacgaccaggtgctggtgcgcgtcgccgcc 2316

                                                                        
Query: 334  gcggcgctcaaccccgttgattccaagcggcgcatgggcaagttcaaggccaccgactcc 393
            || |||||||||||||| ||  ||||||| |||   ||||||||||||||||||||||||
Sbjct: 2315 gccgcgctcaaccccgtcgacgccaagcgccgcgccggcaagttcaaggccaccgactcc 2256

                     
Query: 394  ccactcccg 402
            || ||||||
Sbjct: 2255 cctctcccg 2247



 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 76/87 (87%)
 Strand = Plus / Minus

                                                                        
Query: 466  aaggagggcgacgaggtgtacggccacatcagcgagaaggtcctcgagggtcccaaacag 525
            ||||| || ||||||||||||||| |||||||||||||||  || ||||| ||||| |||
Sbjct: 2088 aaggaaggggacgaggtgtacggcaacatcagcgagaaggcgctggaggggcccaagcag 2029

                                       
Query: 526  ttcggctcgctggcggagtacaccgcc 552
            |  || |||||||||||||||||||||
Sbjct: 2028 tcggggtcgctggcggagtacaccgcc 2002
to top
>dbj|AK112013.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-C09, full
           insert sequence
          Length = 980

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 69/78 (88%)
 Strand = Plus / Plus

                                                                       
Query: 475 gacgaggtgtacggccacatcagcgagaaggtcctcgagggtcccaaacagttcggctcg 534
           ||||||||||||||| |||||||||||||||  || ||||| ||||| ||||  || |||
Sbjct: 3   gacgaggtgtacggcaacatcagcgagaaggcgctggaggggcccaagcagtcggggtcg 62

                             
Query: 535 ctggcggagtacaccgcc 552
           ||||||||||||||||||
Sbjct: 63  ctggcggagtacaccgcc 80
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                               
Query: 322     aaggtggcggccgcggcgctcaaccccgttga 353
               ||||| |||||||| |||||||||||||||||
Sbjct: 5801052 aaggtcgcggccgccgcgctcaaccccgttga 5801083
to top
>gb|AC009471.5| Homo sapiens BAC clone RP11-168K7 from 2, complete sequence
          Length = 172445

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 304    gaggaccaggtgctggtgaaggtggc 329
              |||||| |||||||||||||||||||
Sbjct: 140783 gaggacaaggtgctggtgaaggtggc 140808
to top
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome
          Length = 2462499

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 462     cctcaaggagggcgacgaggt 482
               |||||||||||||||||||||
Sbjct: 1583897 cctcaaggagggcgacgaggt 1583877
to top
>ref|XM_809374.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053508851.50) partial mRNA
          Length = 1857

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 463  ctcaaggagggcgacgaggtg 483
            |||||||||||||||||||||
Sbjct: 1327 ctcaaggagggcgacgaggtg 1347
to top
>ref|XM_962834.1| PREDICTED: Tribolium castaneum similar to CG11281-PA (LOC656294),
           mRNA
          Length = 2130

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 279 ggacgtgtcggtgccggcggtgggcgagg 307
           ||||||||||| ||||| |||||||||||
Sbjct: 528 ggacgtgtcggcgccggtggtgggcgagg 556
to top
>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 147     gccgggccggagcgtggtgaccgcg 171
               |||||||||||| ||||||||||||
Sbjct: 1046373 gccgggccggagggtggtgaccgcg 1046397
to top
>emb|BX569692.1| Synechococcus sp. WH8102 complete genome; segment 4/7
          Length = 345997

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 309    ccaggtgctggtgaaggtggcggcc 333
              |||||||||||||||||||| ||||
Sbjct: 342293 ccaggtgctggtgaaggtggtggcc 342317
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 280      gacgtgtcggtgccggcggtg 300
                |||||||||||||||||||||
Sbjct: 24214831 gacgtgtcggtgccggcggtg 24214851
to top
>ref|XM_315706.2| Anopheles gambiae str. PEST ENSANGP00000016480
           (ENSANGG00000013991), partial mRNA
          Length = 1710

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 466 aaggagggcgacgaggtgtac 486
           |||||||||||||||||||||
Sbjct: 205 aaggagggcgacgaggtgtac 225
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 280      gacgtgtcggtgccggcggtg 300
                |||||||||||||||||||||
Sbjct: 24143037 gacgtgtcggtgccggcggtg 24143057
to top
>emb|AL772426.5|CNS08CA4 Oryza sativa chromosome 12, . BAC OJ1310_C03 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 132733

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 280   gacgtgtcggtgccggcggtg 300
             |||||||||||||||||||||
Sbjct: 99522 gacgtgtcggtgccggcggtg 99542
to top
>ref|NM_022469.3| Homo sapiens gremlin 2, cysteine knot superfamily, homolog (Xenopus
           laevis) (GREM2), mRNA
          Length = 4199

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 312 ggtgctggtgaaggtggcgg 331
           ||||||||||||||||||||
Sbjct: 319 ggtgctggtgaaggtggcgg 338
to top
>ref|XM_525111.1| PREDICTED: Pan troglodytes similar to gremlin 2 homolog, cysteine
           knot superfamily; protein related to DAN and cerberus
           (LOC469727), mRNA
          Length = 1002

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 312 ggtgctggtgaaggtggcgg 331
           ||||||||||||||||||||
Sbjct: 534 ggtgctggtgaaggtggcgg 553
to top
>ref|XM_470860.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 834

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 321 gaaggtggcggccgcggcgc 340
           ||||||||||||||||||||
Sbjct: 349 gaaggtggcggccgcggcgc 368
to top
>gb|BT018785.1| Zea mays clone EL01N0527F04.d mRNA sequence
          Length = 1402

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 309 ccaggtgctggtgaaggtgg 328
           ||||||||||||||||||||
Sbjct: 433 ccaggtgctggtgaaggtgg 452
to top
>gb|AF326781.1| Triticum monococcum actin (ACT-1) gene, partial cds; putative
             chromosome condensation factor (CCF), putative resistance
             protein (RGA-2), putative resistance protein (RGA2) and
             putative nodulin-like-like protein (NLL) gene, complete
             cds; and retrotransposons Josephine, Angela-2, Angela-4,
             Heidi, Greti, Angela-3, Fatima, Erika-1, Angela-6,
             Angela-5, Barbara, Isabelle, Erika-2, and Claudia
          Length = 211009

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 311   aggtgctggtgaaggtggcg 330
             ||||||||||||||||||||
Sbjct: 66838 aggtgctggtgaaggtggcg 66857
to top
>gb|AC079853.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0004M10, complete sequence
          Length = 152423

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 321   gaaggtggcggccgcggcgc 340
             ||||||||||||||||||||
Sbjct: 69456 gaaggtggcggccgcggcgc 69437
to top
>gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome
          Length = 3481691

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 348    cgttgattccaagcggcgca 367
              ||||||||||||||||||||
Sbjct: 106082 cgttgattccaagcggcgca 106063
to top
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 186     ggcggtggccgtcacggcga 205
               ||||||||||||||||||||
Sbjct: 1755721 ggcggtggccgtcacggcga 1755702
to top
>ref|XM_869700.1| PREDICTED: Bos taurus similar to splicing factor, arginine/serine
           rich 9 (predicted) (LOC617440), mRNA
          Length = 1532

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 483 gtacggccacatcagcgaga 502
           ||||||||||||||||||||
Sbjct: 288 gtacggccacatcagcgaga 307
to top
>gb|AC126608.20| Mus musculus chromosome 19, clone RP24-166L20, complete sequence
          Length = 139126

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 366   catgggcaagttcaaggcca 385
             ||||||||||||||||||||
Sbjct: 37521 catgggcaagttcaaggcca 37540
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 321      gaaggtggcggccgcggcgc 340
                ||||||||||||||||||||
Sbjct: 15807656 gaaggtggcggccgcggcgc 15807637
to top
>emb|AJ298054.1|MMA298054 Mus musculus Ly57 gene for lymphocyte antigen 57
          Length = 71456

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 366   catgggcaagttcaaggcca 385
             ||||||||||||||||||||
Sbjct: 52190 catgggcaagttcaaggcca 52171
to top
>ref|XM_447784.1| Candida glabrata CBS138, CAGL0J01771g partial mRNA
          Length = 4662

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 309  ccaggtgctggtgaaggtgg 328
            ||||||||||||||||||||
Sbjct: 3097 ccaggtgctggtgaaggtgg 3116



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 309  ccaggtgctggtgaaggtgg 328
            ||||||||||||||||||||
Sbjct: 2821 ccaggtgctggtgaaggtgg 2840
to top
>gb|AC117253.3| Mus musculus BAC clone RP24-405A12 from chromosome 19, complete
           sequence
          Length = 142903

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 366 catgggcaagttcaaggcca 385
           ||||||||||||||||||||
Sbjct: 498 catgggcaagttcaaggcca 479
to top
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 299     tgggcgaggaccaggtgctggtgaaggt 326
               |||||||||| |||| ||||||||||||
Sbjct: 1955096 tgggcgaggatcaggggctggtgaaggt 1955123
to top
>emb|AL445483.13| Human DNA sequence from clone RP11-92G12 on chromosome 1 Contains the
             KIF14 gene for kinesin family member 14, a novel gene
             (DKFZp564B1023) and a novel gene, complete sequence
          Length = 164008

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 390   ctccccactcccgactgtgc 409
             ||||||||||||||||||||
Sbjct: 83546 ctccccactcccgactgtgc 83565
to top
>emb|AL358176.22| Human DNA sequence from clone RP11-467I20 on chromosome 1 Contains the
             gene for protein related to DAN and cerberus (FLJ21195),
             two novel genes, a pseudogene similar to part of
             cytochrome c oxidase I (MTCOI1), a ribosomal protein S11
             (RPS11) pseudogene, a ferredoxin pseudogene and a CpG
             island, complete sequence
          Length = 184311

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 312   ggtgctggtgaaggtggcgg 331
             ||||||||||||||||||||
Sbjct: 17542 ggtgctggtgaaggtggcgg 17523
to top
>emb|AL353588.25| Human DNA sequence from clone RP11-444E17 on chromosome 6 Contains the
             gene for a novel protein (possible ortholog of mouse
             TCTE1), the gene for novel protein (KIAA1270), a novel
             gene, the 5' end of a novel gene (possible ortholog of
             rodent CDC5-like protein), the 3' part of a novel gene and
             three CpG islands, complete sequence
          Length = 145947

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 309   ccaggtgctggtgaaggtgg 328
             ||||||||||||||||||||
Sbjct: 24621 ccaggtgctggtgaaggtgg 24602
to top
>emb|CR380956.1| Candida glabrata strain CBS138 chromosome J complete sequence
          Length = 1192501

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 309    ccaggtgctggtgaaggtgg 328
              ||||||||||||||||||||
Sbjct: 166649 ccaggtgctggtgaaggtgg 166630



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 309    ccaggtgctggtgaaggtgg 328
              ||||||||||||||||||||
Sbjct: 166373 ccaggtgctggtgaaggtgg 166354
to top
>gb|BC046632.1| Homo sapiens gremlin 2, cysteine knot superfamily, homolog (Xenopus
           laevis), mRNA (cDNA clone MGC:44218 IMAGE:5288555),
           complete cds
          Length = 3208

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 312 ggtgctggtgaaggtggcgg 331
           ||||||||||||||||||||
Sbjct: 247 ggtgctggtgaaggtggcgg 266
to top
>emb|AL645948.10| Mouse DNA sequence from clone RP23-298M7 on chromosome 11 Contains an
             H+ transporting ATP synthase mitochondrial F0 complex
             subunit g (Atp5l) pseudogene, a ferritin light chain 1
             (Ftl1) pseudogene, three novel genes, the gene for a novel
             ENTH domain containing protein, the 5' end of the Sox30
             gene for SRY-box containing gene 30 and three Cpg islands,
             complete sequence
          Length = 207877

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 316   ctggtgaaggtggcggccgcggcg 339
             |||||||||| |||||||||||||
Sbjct: 76537 ctggtgaaggcggcggccgcggcg 76560
to top
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 157     agcgtggtgaccgcggcgtc 176
               ||||||||||||||||||||
Sbjct: 1853027 agcgtggtgaccgcggcgtc 1853046
to top
>dbj|AB206256.1| Cupriavidus necator phaZd gene for intracellular
            poly(3-hydroxybutyrate) depolymerase, complete cds
          Length = 3103

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 322  aaggtggcggccgcggcgct 341
            ||||||||||||||||||||
Sbjct: 2077 aaggtggcggccgcggcgct 2096
to top
>gb|AF232751.1| Mycobacterium avium subsp. paratuberculosis major membrane protein-1
            gene, partial cds; nifS-like protein gene, complete cds;
            and unknown protein gene, partial cds
          Length = 4180

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 312  ggtgctggtgaaggtggcggccgc 335
            ||||||||||||||||||| ||||
Sbjct: 3971 ggtgctggtgaaggtggcgtccgc 3994
to top
>gb|AF319998.1|AF319998 Stigmatella aurantiaca myxalamid biosynthetic gene cluster, complete
             sequence
          Length = 49736

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 329   cggccgcggcgctcaacccc 348
             ||||||||||||||||||||
Sbjct: 38133 cggccgcggcgctcaacccc 38152
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 321      gaaggtggcggccgcggcgc 340
                ||||||||||||||||||||
Sbjct: 15802190 gaaggtggcggccgcggcgc 15802171
to top
>gb|AE004817.1| Pseudomonas aeruginosa PAO1, section 378 of 529 of the complete
            genome
          Length = 16964

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 437  tcaaggtcggcagccaggta 456
            ||||||||||||||||||||
Sbjct: 8500 tcaaggtcggcagccaggta 8481
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 167     ccgcggcgtcatcgtccccg 186
               ||||||||||||||||||||
Sbjct: 1007396 ccgcggcgtcatcgtccccg 1007415
to top
>gb|AY724229.1| Uncultured bacterium clone DUNnos247 (+1C) (nosOTU#037) nitrous
           oxide reductase (nosZ) gene, partial cds
          Length = 672

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 464 tcaaggagggcgacgaggtg 483
           ||||||||||||||||||||
Sbjct: 497 tcaaggagggcgacgaggtg 516
to top
>gb|AY724226.1| Uncultured bacterium clone DUNnos245 (+1C) (nosOTU#037) nitrous
           oxide reductase (nosZ) gene, partial cds
          Length = 672

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 464 tcaaggagggcgacgaggtg 483
           ||||||||||||||||||||
Sbjct: 497 tcaaggagggcgacgaggtg 516
to top
>gb|AE005090.1| Halobacterium sp. NRC-1 section 121 of 170 of the complete genome
          Length = 13542

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 276  cgaggacgtgtcggtgccggcggt 299
            |||||||||||||||| |||||||
Sbjct: 2471 cgaggacgtgtcggtgtcggcggt 2494
to top
>dbj|AK120906.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031H21, full
           insert sequence
          Length = 1714

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 321 gaaggtggcggccgcggcgc 340
           ||||||||||||||||||||
Sbjct: 333 gaaggtggcggccgcggcgc 352
to top
>dbj|AK120483.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013112K02, full
           insert sequence
          Length = 2656

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 321 gaaggtggcggccgcggcgc 340
           ||||||||||||||||||||
Sbjct: 287 gaaggtggcggccgcggcgc 306
to top
>dbj|AK024848.1| Homo sapiens cDNA: FLJ21195 fis, clone COL00185
          Length = 2029

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 312 ggtgctggtgaaggtggcgg 331
           ||||||||||||||||||||
Sbjct: 306 ggtgctggtgaaggtggcgg 325
to top
>ref|XM_310912.2| Anopheles gambiae str. PEST ENSANGP00000012793 (ENSANGG00000010304),
            partial mRNA
          Length = 6702

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 271  ctcgacgaggacgtgtcggtgccg 294
            ||||||||||||||| ||||||||
Sbjct: 3652 ctcgacgaggacgtgccggtgccg 3675
to top
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 201     ggcgacggacgttcccgggacgat 224
               ||||||||||||||||| ||||||
Sbjct: 2285758 ggcgacggacgttcccgagacgat 2285735
to top
>gb|AY913117.1| Uncultured forest soil bacterium clone DUNnos246 nitrous oxide
           reductase (nosZ) gene, partial cds
          Length = 672

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 464 tcaaggagggcgacgaggtg 483
           ||||||||||||||||||||
Sbjct: 497 tcaaggagggcgacgaggtg 516
to top
>gb|AY105724.1| Zea mays PCO149105 mRNA sequence
          Length = 1357

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 309 ccaggtgctggtgaaggtgg 328
           ||||||||||||||||||||
Sbjct: 521 ccaggtgctggtgaaggtgg 540
to top
>gb|AF147448.1|AF147448 Pseudomonas aeruginosa strain PAO1 penicillin-binding protein 2
            (pbpA), rod-shape-determining protein (rodA),
            membrane-bound lytic transglycosylase (mltB), rare
            lipoprotein A (rlpA), penicillin-binding protein 5
            (dacA), and lipoate biosynthesis protein B (lipB) genes,
            complete cds; and unknown gene
          Length = 7543

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 437  tcaaggtcggcagccaggta 456
            ||||||||||||||||||||
Sbjct: 5590 tcaaggtcggcagccaggta 5609
to top
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 312     ggtgctggtgaaggtggcggccgc 335
               ||||||||||||||||||| ||||
Sbjct: 2346853 ggtgctggtgaaggtggcgtccgc 2346830
to top
>emb|AJ628955.2| Streptomyces rimosus subsp. paromomycinus genomic region of the
             paromomycin biosynthesis gene cluster, strain NRRL 2455
          Length = 48169

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 189   ggtggccgtcacggcgacgg 208
             ||||||||||||||||||||
Sbjct: 35540 ggtggccgtcacggcgacgg 35559
to top
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica
          Length = 3066374

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 74      gaccccagctcctcctgtcc 93
               ||||||||||||||||||||
Sbjct: 2428424 gaccccagctcctcctgtcc 2428443


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,304,044
Number of Sequences: 3902068
Number of extensions: 3304044
Number of successful extensions: 80652
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 78906
Number of HSP's gapped (non-prelim): 1730
length of query: 552
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 529
effective length of database: 17,143,297,704
effective search space: 9068804485416
effective search space used: 9068804485416
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top