ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd24a16 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK066418.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013067H19, full insert sequence Length = 3349 Score = 654 bits (330), Expect = 0.0 Identities = 543/614 (88%), Gaps = 10/614 (1%) Strand = Plus / Plus Query: 1 agtgctactttggctgctgtaaaggccaggcaagttaatggtgagatggagcattcacct 60 ||||||||||| ||||||||||| || ||||||||||||||||| |||||||||||| Sbjct: 1968 agtgctactttagctgctgtaaaagctcggcaagttaatggtgaggcagagcattcacct 2027 Query: 61 gac---------tctccagnacgccacacaaagtgggaagctaaattcaagccttatcaa 111 ||| ||||||| | ||||||| ||||| ||||| |||| ||||||| || || Sbjct: 2028 gacagggagcagtctccag-atgccacaccaagtgtgaagcaaaatgcaagcctgataaa 2086 Query: 112 accagatgttgctcttgcaaacaattcaacaccacctcccggggttcggttacaccatag 171 |||||| ||||||| |||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 2087 accagactatgctctttcaaataattcaacaccacctcctggggttcggttacaccatag 2146 Query: 172 agcagttgtggtagcagcagaaacaggaggtgccttaggtggcatggttaggcagctgtc 231 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 2147 agcagttgtggtagcagcagaaaccggaggtgccttaggtggcatggttaggcagctctc 2206 Query: 232 aattgatcagtttgaaaatgaaggaagaagggttatctatggcactcctgagaatgcaac 291 |||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||| Sbjct: 2207 aattgaccagtttgaaaatgaaggaagaagggtcatctatggcactcctgagagtgcaac 2266 Query: 292 tgcagctagaaaattactggatagacaaatgtctattaatagtgtgcccaaaaaggtaat 351 |||||| || || || || ||| | |||||||||||||||||||| || ||||||||||| Sbjct: 2267 tgcagcaaggaagttgctagatcggcaaatgtctattaatagtgtacctaaaaaggtaat 2326 Query: 352 tgcctctctcttgaaaccccgtggttggaagccccctgtacgaaggcaattcttcctgga 411 ||| || ||||||||||| |||||||||||||||||||| |||||||| ||||| |||| Sbjct: 2327 tgcatccctcttgaaacctcgtggttggaagccccctgtgcgaaggcagttctttttgga 2386 Query: 412 ctgtaatgagatagcagatctgtgtgatagtgccgaaaggatattttcaagtgaaccaag 471 ||| |||||||| ||||| || ||||||||||| ||||| |||||||||||||||||||| Sbjct: 2387 ctgcaatgagattgcagacctatgtgatagtgcggaaagaatattttcaagtgaaccaag 2446 Query: 472 tgtcataaagcttaaagctcccattaagatatttggtgatttgcatggtcaatttggtga 531 |||| || ||||||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 2447 tgtcctacagcttaaagctccaattaagatatttggtgatttgcacggtcaatttggtga 2506 Query: 532 cttaatgcgcttattcgacgagtatggtgctccctcaacagcaggagatattgcttacat 591 | |||||||||| || || ||||| |||||||| || ||||| ||||| ||||||||||| Sbjct: 2507 cctaatgcgcttgtttgatgagtacggtgctccttcgacagctggagacattgcttacat 2566 Query: 592 tgattatctcttct 605 |||||| ||||||| Sbjct: 2567 tgattacctcttct 2580
>dbj|AK065064.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001J19, full insert sequence Length = 3803 Score = 654 bits (330), Expect = 0.0 Identities = 543/614 (88%), Gaps = 10/614 (1%) Strand = Plus / Plus Query: 1 agtgctactttggctgctgtaaaggccaggcaagttaatggtgagatggagcattcacct 60 ||||||||||| ||||||||||| || ||||||||||||||||| |||||||||||| Sbjct: 1695 agtgctactttagctgctgtaaaagctcggcaagttaatggtgaggcagagcattcacct 1754 Query: 61 gac---------tctccagnacgccacacaaagtgggaagctaaattcaagccttatcaa 111 ||| ||||||| | ||||||| ||||| ||||| |||| ||||||| || || Sbjct: 1755 gacagggagcagtctccag-atgccacaccaagtgtgaagcaaaatgcaagcctgataaa 1813 Query: 112 accagatgttgctcttgcaaacaattcaacaccacctcccggggttcggttacaccatag 171 |||||| ||||||| |||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 1814 accagactatgctctttcaaataattcaacaccacctcctggggttcggttacaccatag 1873 Query: 172 agcagttgtggtagcagcagaaacaggaggtgccttaggtggcatggttaggcagctgtc 231 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct: 1874 agcagttgtggtagcagcagaaaccggaggtgccttaggtggcatggttaggcagctctc 1933 Query: 232 aattgatcagtttgaaaatgaaggaagaagggttatctatggcactcctgagaatgcaac 291 |||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||| Sbjct: 1934 aattgaccagtttgaaaatgaaggaagaagggtcatctatggcactcctgagagtgcaac 1993 Query: 292 tgcagctagaaaattactggatagacaaatgtctattaatagtgtgcccaaaaaggtaat 351 |||||| || || || || ||| | |||||||||||||||||||| || ||||||||||| Sbjct: 1994 tgcagcaaggaagttgctagatcggcaaatgtctattaatagtgtacctaaaaaggtaat 2053 Query: 352 tgcctctctcttgaaaccccgtggttggaagccccctgtacgaaggcaattcttcctgga 411 ||| || ||||||||||| |||||||||||||||||||| |||||||| ||||| |||| Sbjct: 2054 tgcatccctcttgaaacctcgtggttggaagccccctgtgcgaaggcagttctttttgga 2113 Query: 412 ctgtaatgagatagcagatctgtgtgatagtgccgaaaggatattttcaagtgaaccaag 471 ||| |||||||| ||||| || ||||||||||| ||||| |||||||||||||||||||| Sbjct: 2114 ctgcaatgagattgcagacctatgtgatagtgcggaaagaatattttcaagtgaaccaag 2173 Query: 472 tgtcataaagcttaaagctcccattaagatatttggtgatttgcatggtcaatttggtga 531 |||| || ||||||||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 2174 tgtcctacagcttaaagctccaattaagatatttggtgatttgcacggtcaatttggtga 2233 Query: 532 cttaatgcgcttattcgacgagtatggtgctccctcaacagcaggagatattgcttacat 591 | |||||||||| || || ||||| |||||||| || ||||| ||||| ||||||||||| Sbjct: 2234 cctaatgcgcttgtttgatgagtacggtgctccttcgacagctggagacattgcttacat 2293 Query: 592 tgattatctcttct 605 |||||| ||||||| Sbjct: 2294 tgattacctcttct 2307
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 272 bits (137), Expect = 1e-69 Identities = 215/241 (89%) Strand = Plus / Minus Query: 345 aggtaattgcctctctcttgaaaccccgtggttggaagccccctgtacgaaggcaattct 404 |||||||||| || ||||||||||| |||||||||||||||||||| |||||||| |||| Sbjct: 26343026 aggtaattgcatccctcttgaaacctcgtggttggaagccccctgtgcgaaggcagttct 26342967 Query: 405 tcctggactgtaatgagatagcagatctgtgtgatagtgccgaaaggatattttcaagtg 464 | ||||||| |||||||| ||||| || ||||||||||| ||||| ||||||||||||| Sbjct: 26342966 ttttggactgcaatgagattgcagacctatgtgatagtgcggaaagaatattttcaagtg 26342907 Query: 465 aaccaagtgtcataaagcttaaagctcccattaagatatttggtgatttgcatggtcaat 524 ||||||||||| || ||||||||||||| ||||||||||||||||||||||| ||||||| Sbjct: 26342906 aaccaagtgtcctacagcttaaagctccaattaagatatttggtgatttgcacggtcaat 26342847 Query: 525 ttggtgacttaatgcgcttattcgacgagtatggtgctccctcaacagcaggagatattg 584 |||||||| |||||||||| || || ||||| |||||||| || ||||| ||||| |||| Sbjct: 26342846 ttggtgacctaatgcgcttgtttgatgagtacggtgctccttcgacagctggagacattg 26342787 Query: 585 c 585 | Sbjct: 26342786 c 26342786 Score = 234 bits (118), Expect = 3e-58 Identities = 160/174 (91%) Strand = Plus / Minus Query: 176 gttgtggtagcagcagaaacaggaggtgccttaggtggcatggttaggcagctgtcaatt 235 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 26343403 gttgtggtagcagcagaaaccggaggtgccttaggtggcatggttaggcagctctcaatt 26343344 Query: 236 gatcagtttgaaaatgaaggaagaagggttatctatggcactcctgagaatgcaactgca 295 || |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| Sbjct: 26343343 gaccagtttgaaaatgaaggaagaagggtcatctatggcactcctgagagtgcaactgca 26343284 Query: 296 gctagaaaattactggatagacaaatgtctattaatagtgtgcccaaaaaggta 349 || || || || || ||| | |||||||||||||||||||| || ||||||||| Sbjct: 26343283 gcaaggaagttgctagatcggcaaatgtctattaatagtgtacctaaaaaggta 26343230 Score = 131 bits (66), Expect = 3e-27 Identities = 156/186 (83%), Gaps = 10/186 (5%) Strand = Plus / Minus Query: 1 agtgctactttggctgctgtaaaggccaggcaagttaatggtgagatggagcattcacct 60 ||||||||||| ||||||||||| || ||||||||||||||||| |||||||||||| Sbjct: 26343787 agtgctactttagctgctgtaaaagctcggcaagttaatggtgaggcagagcattcacct 26343728 Query: 61 gac---------tctccagnacgccacacaaagtgggaagctaaattcaagccttatcaa 111 ||| ||||||| | ||||||| ||||| ||||| |||| ||||||| || || Sbjct: 26343727 gacagggagcagtctccag-atgccacaccaagtgtgaagcaaaatgcaagcctgataaa 26343669 Query: 112 accagatgttgctcttgcaaacaattcaacaccacctcccggggttcggttacaccatag 171 |||||| ||||||| |||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 26343668 accagactatgctctttcaaataattcaacaccacctcctggggttcggttacaccatag 26343609 Query: 172 agcagt 177 |||||| Sbjct: 26343608 agcagt 26343603
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 272 bits (137), Expect = 1e-69 Identities = 215/241 (89%) Strand = Plus / Minus Query: 345 aggtaattgcctctctcttgaaaccccgtggttggaagccccctgtacgaaggcaattct 404 |||||||||| || ||||||||||| |||||||||||||||||||| |||||||| |||| Sbjct: 26271194 aggtaattgcatccctcttgaaacctcgtggttggaagccccctgtgcgaaggcagttct 26271135 Query: 405 tcctggactgtaatgagatagcagatctgtgtgatagtgccgaaaggatattttcaagtg 464 | ||||||| |||||||| ||||| || ||||||||||| ||||| ||||||||||||| Sbjct: 26271134 ttttggactgcaatgagattgcagacctatgtgatagtgcggaaagaatattttcaagtg 26271075 Query: 465 aaccaagtgtcataaagcttaaagctcccattaagatatttggtgatttgcatggtcaat 524 ||||||||||| || ||||||||||||| ||||||||||||||||||||||| ||||||| Sbjct: 26271074 aaccaagtgtcctacagcttaaagctccaattaagatatttggtgatttgcacggtcaat 26271015 Query: 525 ttggtgacttaatgcgcttattcgacgagtatggtgctccctcaacagcaggagatattg 584 |||||||| |||||||||| || || ||||| |||||||| || ||||| ||||| |||| Sbjct: 26271014 ttggtgacctaatgcgcttgtttgatgagtacggtgctccttcgacagctggagacattg 26270955 Query: 585 c 585 | Sbjct: 26270954 c 26270954 Score = 234 bits (118), Expect = 3e-58 Identities = 160/174 (91%) Strand = Plus / Minus Query: 176 gttgtggtagcagcagaaacaggaggtgccttaggtggcatggttaggcagctgtcaatt 235 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 26271571 gttgtggtagcagcagaaaccggaggtgccttaggtggcatggttaggcagctctcaatt 26271512 Query: 236 gatcagtttgaaaatgaaggaagaagggttatctatggcactcctgagaatgcaactgca 295 || |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| Sbjct: 26271511 gaccagtttgaaaatgaaggaagaagggtcatctatggcactcctgagagtgcaactgca 26271452 Query: 296 gctagaaaattactggatagacaaatgtctattaatagtgtgcccaaaaaggta 349 || || || || || ||| | |||||||||||||||||||| || ||||||||| Sbjct: 26271451 gcaaggaagttgctagatcggcaaatgtctattaatagtgtacctaaaaaggta 26271398 Score = 131 bits (66), Expect = 3e-27 Identities = 156/186 (83%), Gaps = 10/186 (5%) Strand = Plus / Minus Query: 1 agtgctactttggctgctgtaaaggccaggcaagttaatggtgagatggagcattcacct 60 ||||||||||| ||||||||||| || ||||||||||||||||| |||||||||||| Sbjct: 26271955 agtgctactttagctgctgtaaaagctcggcaagttaatggtgaggcagagcattcacct 26271896 Query: 61 gac---------tctccagnacgccacacaaagtgggaagctaaattcaagccttatcaa 111 ||| ||||||| | ||||||| ||||| ||||| |||| ||||||| || || Sbjct: 26271895 gacagggagcagtctccag-atgccacaccaagtgtgaagcaaaatgcaagcctgataaa 26271837 Query: 112 accagatgttgctcttgcaaacaattcaacaccacctcccggggttcggttacaccatag 171 |||||| ||||||| |||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 26271836 accagactatgctctttcaaataattcaacaccacctcctggggttcggttacaccatag 26271777 Query: 172 agcagt 177 |||||| Sbjct: 26271776 agcagt 26271771
>emb|AL731885.4|CNS08C8P Oryza sativa chromosome 12, . BAC OSJNBb0016A10 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 133978 Score = 272 bits (137), Expect = 1e-69 Identities = 215/241 (89%) Strand = Plus / Minus Query: 345 aggtaattgcctctctcttgaaaccccgtggttggaagccccctgtacgaaggcaattct 404 |||||||||| || ||||||||||| |||||||||||||||||||| |||||||| |||| Sbjct: 107010 aggtaattgcatccctcttgaaacctcgtggttggaagccccctgtgcgaaggcagttct 106951 Query: 405 tcctggactgtaatgagatagcagatctgtgtgatagtgccgaaaggatattttcaagtg 464 | ||||||| |||||||| ||||| || ||||||||||| ||||| ||||||||||||| Sbjct: 106950 ttttggactgcaatgagattgcagacctatgtgatagtgcggaaagaatattttcaagtg 106891 Query: 465 aaccaagtgtcataaagcttaaagctcccattaagatatttggtgatttgcatggtcaat 524 ||||||||||| || ||||||||||||| ||||||||||||||||||||||| ||||||| Sbjct: 106890 aaccaagtgtcctacagcttaaagctccaattaagatatttggtgatttgcacggtcaat 106831 Query: 525 ttggtgacttaatgcgcttattcgacgagtatggtgctccctcaacagcaggagatattg 584 |||||||| |||||||||| || || ||||| |||||||| || ||||| ||||| |||| Sbjct: 106830 ttggtgacctaatgcgcttgtttgatgagtacggtgctccttcgacagctggagacattg 106771 Query: 585 c 585 | Sbjct: 106770 c 106770 Score = 234 bits (118), Expect = 3e-58 Identities = 160/174 (91%) Strand = Plus / Minus Query: 176 gttgtggtagcagcagaaacaggaggtgccttaggtggcatggttaggcagctgtcaatt 235 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 107387 gttgtggtagcagcagaaaccggaggtgccttaggtggcatggttaggcagctctcaatt 107328 Query: 236 gatcagtttgaaaatgaaggaagaagggttatctatggcactcctgagaatgcaactgca 295 || |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| Sbjct: 107327 gaccagtttgaaaatgaaggaagaagggtcatctatggcactcctgagagtgcaactgca 107268 Query: 296 gctagaaaattactggatagacaaatgtctattaatagtgtgcccaaaaaggta 349 || || || || || ||| | |||||||||||||||||||| || ||||||||| Sbjct: 107267 gcaaggaagttgctagatcggcaaatgtctattaatagtgtacctaaaaaggta 107214 Score = 131 bits (66), Expect = 3e-27 Identities = 156/186 (83%), Gaps = 10/186 (5%) Strand = Plus / Minus Query: 1 agtgctactttggctgctgtaaaggccaggcaagttaatggtgagatggagcattcacct 60 ||||||||||| ||||||||||| || ||||||||||||||||| |||||||||||| Sbjct: 107771 agtgctactttagctgctgtaaaagctcggcaagttaatggtgaggcagagcattcacct 107712 Query: 61 gac---------tctccagnacgccacacaaagtgggaagctaaattcaagccttatcaa 111 ||| ||||||| | ||||||| ||||| ||||| |||| ||||||| || || Sbjct: 107711 gacagggagcagtctccag-atgccacaccaagtgtgaagcaaaatgcaagcctgataaa 107653 Query: 112 accagatgttgctcttgcaaacaattcaacaccacctcccggggttcggttacaccatag 171 |||||| ||||||| |||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 107652 accagactatgctctttcaaataattcaacaccacctcctggggttcggttacaccatag 107593 Query: 172 agcagt 177 |||||| Sbjct: 107592 agcagt 107587
>emb|AL845347.4|CNS08CB9 Oryza sativa chromosome 12, . BAC OSJNBb0101I10 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 131689 Score = 272 bits (137), Expect = 1e-69 Identities = 215/241 (89%) Strand = Plus / Minus Query: 345 aggtaattgcctctctcttgaaaccccgtggttggaagccccctgtacgaaggcaattct 404 |||||||||| || ||||||||||| |||||||||||||||||||| |||||||| |||| Sbjct: 57298 aggtaattgcatccctcttgaaacctcgtggttggaagccccctgtgcgaaggcagttct 57239 Query: 405 tcctggactgtaatgagatagcagatctgtgtgatagtgccgaaaggatattttcaagtg 464 | ||||||| |||||||| ||||| || ||||||||||| ||||| ||||||||||||| Sbjct: 57238 ttttggactgcaatgagattgcagacctatgtgatagtgcggaaagaatattttcaagtg 57179 Query: 465 aaccaagtgtcataaagcttaaagctcccattaagatatttggtgatttgcatggtcaat 524 ||||||||||| || ||||||||||||| ||||||||||||||||||||||| ||||||| Sbjct: 57178 aaccaagtgtcctacagcttaaagctccaattaagatatttggtgatttgcacggtcaat 57119 Query: 525 ttggtgacttaatgcgcttattcgacgagtatggtgctccctcaacagcaggagatattg 584 |||||||| |||||||||| || || ||||| |||||||| || ||||| ||||| |||| Sbjct: 57118 ttggtgacctaatgcgcttgtttgatgagtacggtgctccttcgacagctggagacattg 57059 Query: 585 c 585 | Sbjct: 57058 c 57058 Score = 234 bits (118), Expect = 3e-58 Identities = 160/174 (91%) Strand = Plus / Minus Query: 176 gttgtggtagcagcagaaacaggaggtgccttaggtggcatggttaggcagctgtcaatt 235 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 57675 gttgtggtagcagcagaaaccggaggtgccttaggtggcatggttaggcagctctcaatt 57616 Query: 236 gatcagtttgaaaatgaaggaagaagggttatctatggcactcctgagaatgcaactgca 295 || |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| Sbjct: 57615 gaccagtttgaaaatgaaggaagaagggtcatctatggcactcctgagagtgcaactgca 57556 Query: 296 gctagaaaattactggatagacaaatgtctattaatagtgtgcccaaaaaggta 349 || || || || || ||| | |||||||||||||||||||| || ||||||||| Sbjct: 57555 gcaaggaagttgctagatcggcaaatgtctattaatagtgtacctaaaaaggta 57502 Score = 131 bits (66), Expect = 3e-27 Identities = 156/186 (83%), Gaps = 10/186 (5%) Strand = Plus / Minus Query: 1 agtgctactttggctgctgtaaaggccaggcaagttaatggtgagatggagcattcacct 60 ||||||||||| ||||||||||| || ||||||||||||||||| |||||||||||| Sbjct: 58059 agtgctactttagctgctgtaaaagctcggcaagttaatggtgaggcagagcattcacct 58000 Query: 61 gac---------tctccagnacgccacacaaagtgggaagctaaattcaagccttatcaa 111 ||| ||||||| | ||||||| ||||| ||||| |||| ||||||| || || Sbjct: 57999 gacagggagcagtctccag-atgccacaccaagtgtgaagcaaaatgcaagcctgataaa 57941 Query: 112 accagatgttgctcttgcaaacaattcaacaccacctcccggggttcggttacaccatag 171 |||||| ||||||| |||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 57940 accagactatgctctttcaaataattcaacaccacctcctggggttcggttacaccatag 57881 Query: 172 agcagt 177 |||||| Sbjct: 57880 agcagt 57875
>emb|AL731878.4|CNS08C8I Oryza sativa chromosome 3, . BAC OSJNBb0116P11 of library OSJNBb from chromosome 3 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 128559 Score = 240 bits (121), Expect = 4e-60 Identities = 211/241 (87%) Strand = Plus / Minus Query: 345 aggtaattgcctctctcttgaaaccccgtggttggaagccccctgtacgaaggcaattct 404 |||| ||||| ||||| |||||||| |||||||||||||||||||| ||||| || |||| Sbjct: 45667 aggtgattgcatctctattgaaacctcgtggttggaagccccctgtgcgaagacagttct 45608 Query: 405 tcctggactgtaatgagatagcagatctgtgtgatagtgccgaaaggatattttcaagtg 464 || ||||||| |||||||| |||||||| ||||||||||| || || ||||||||||||| Sbjct: 45607 tcttggactgcaatgagattgcagatctatgtgatagtgctgagagaatattttcaagtg 45548 Query: 465 aaccaagtgtcataaagcttaaagctcccattaagatatttggtgatttgcatggtcaat 524 |||||||||| | | ||||||||||| ||||||||||||||||||| |||||||||| Sbjct: 45547 aaccaagtgttctgcaacttaaagctcctgttaagatatttggtgatttacatggtcaat 45488 Query: 525 ttggtgacttaatgcgcttattcgacgagtatggtgctccctcaacagcaggagatattg 584 |||||||| | ||||| || || || |||||||||||||| |||||||||||||| |||| Sbjct: 45487 ttggtgacctcatgcgattgtttgatgagtatggtgctccttcaacagcaggagacattg 45428 Query: 585 c 585 | Sbjct: 45427 c 45427 Score = 170 bits (86), Expect = 3e-39 Identities = 143/162 (88%) Strand = Plus / Minus Query: 188 gcagaaacaggaggtgccttaggtggcatggttaggcagctgtcaattgatcagtttgaa 247 |||||||| ||||||||||||||||||||||| ||||||||||||||||| || |||||| Sbjct: 45988 gcagaaactggaggtgccttaggtggcatggtcaggcagctgtcaattgaccaatttgaa 45929 Query: 248 aatgaaggaagaagggttatctatggcactcctgagaatgcaactgcagctagaaaatta 307 ||||| |||||||| || | ||||||||| ||||||||||||||||| || ||||| || Sbjct: 45928 aatgagggaagaagagtcagctatggcacccctgagaatgcaactgctgcaagaaagttg 45869 Query: 308 ctggatagacaaatgtctattaatagtgtgcccaaaaaggta 349 || ||| |||| ||||| ||||||||||| || ||||||||| Sbjct: 45868 ctagatcgacagatgtccattaatagtgttcctaaaaaggta 45827 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Minus Query: 1 agtgctactttggctgctgtaaaggccaggcaagttaatggtgagatggagca 53 ||||| ||||| ||||| || ||||| ||||| ||||| |||||||||||||| Sbjct: 46351 agtgcaactttagctgcagtgaaggctaggcaggttaacggtgagatggagca 46299 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 586 ttacattgattatctcttct 605 |||||||||||||||||||| Sbjct: 44939 ttacattgattatctcttct 44920
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 240 bits (121), Expect = 4e-60 Identities = 211/241 (87%) Strand = Plus / Minus Query: 345 aggtaattgcctctctcttgaaaccccgtggttggaagccccctgtacgaaggcaattct 404 |||| ||||| ||||| |||||||| |||||||||||||||||||| ||||| || |||| Sbjct: 24850039 aggtgattgcatctctattgaaacctcgtggttggaagccccctgtgcgaagacagttct 24849980 Query: 405 tcctggactgtaatgagatagcagatctgtgtgatagtgccgaaaggatattttcaagtg 464 || ||||||| |||||||| |||||||| ||||||||||| || || ||||||||||||| Sbjct: 24849979 tcttggactgcaatgagattgcagatctatgtgatagtgctgagagaatattttcaagtg 24849920 Query: 465 aaccaagtgtcataaagcttaaagctcccattaagatatttggtgatttgcatggtcaat 524 |||||||||| | | ||||||||||| ||||||||||||||||||| |||||||||| Sbjct: 24849919 aaccaagtgttctgcaacttaaagctcctgttaagatatttggtgatttacatggtcaat 24849860 Query: 525 ttggtgacttaatgcgcttattcgacgagtatggtgctccctcaacagcaggagatattg 584 |||||||| | ||||| || || || |||||||||||||| |||||||||||||| |||| Sbjct: 24849859 ttggtgacctcatgcgattgtttgatgagtatggtgctccttcaacagcaggagacattg 24849800 Query: 585 c 585 | Sbjct: 24849799 c 24849799 Score = 170 bits (86), Expect = 3e-39 Identities = 143/162 (88%) Strand = Plus / Minus Query: 188 gcagaaacaggaggtgccttaggtggcatggttaggcagctgtcaattgatcagtttgaa 247 |||||||| ||||||||||||||||||||||| ||||||||||||||||| || |||||| Sbjct: 24850360 gcagaaactggaggtgccttaggtggcatggtcaggcagctgtcaattgaccaatttgaa 24850301 Query: 248 aatgaaggaagaagggttatctatggcactcctgagaatgcaactgcagctagaaaatta 307 ||||| |||||||| || | ||||||||| ||||||||||||||||| || ||||| || Sbjct: 24850300 aatgagggaagaagagtcagctatggcacccctgagaatgcaactgctgcaagaaagttg 24850241 Query: 308 ctggatagacaaatgtctattaatagtgtgcccaaaaaggta 349 || ||| |||| ||||| ||||||||||| || ||||||||| Sbjct: 24850240 ctagatcgacagatgtccattaatagtgttcctaaaaaggta 24850199 Score = 50.1 bits (25), Expect = 0.009 Identities = 46/53 (86%) Strand = Plus / Minus Query: 1 agtgctactttggctgctgtaaaggccaggcaagttaatggtgagatggagca 53 ||||| ||||| ||||| || ||||| ||||| ||||| |||||||||||||| Sbjct: 24850723 agtgcaactttagctgcagtgaaggctaggcaggttaacggtgagatggagca 24850671 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 586 ttacattgattatctcttct 605 |||||||||||||||||||| Sbjct: 24849311 ttacattgattatctcttct 24849292
>gb|AC124955.34| Medicago truncatula clone mth2-12l24, complete sequence Length = 115804 Score = 119 bits (60), Expect = 1e-23 Identities = 123/144 (85%) Strand = Plus / Minus Query: 206 ttaggtggcatggttaggcagctgtcaattgatcagtttgaaaatgaaggaagaagggtt 265 ||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||| Sbjct: 9414 ttaggtggcatggttaggcagctttcaattgatcagtttgaaaatgaaggcagacgggtc 9355 Query: 266 atctatggcactcctgagaatgcaactgcagctagaaaattactggatagacaaatgtct 325 | ||||| ||||| || | ||||||||| |||||||| ||| | ||| | || |||||| Sbjct: 9354 agttatgggactccagaaagtgcaactgctgctagaaagttattagatcggcagatgtct 9295 Query: 326 attaatagtgtgcccaaaaaggta 349 || |||||||| || || |||||| Sbjct: 9294 atcaatagtgtcccaaagaaggta 9271 Score = 83.8 bits (42), Expect = 6e-13 Identities = 129/158 (81%) Strand = Plus / Minus Query: 371 cgtggttggaagccccctgtacgaaggcaattcttcctggactgtaatgagatagcagat 430 ||||| ||||| || || || ||| |||| || ||| |||| || ||||| || |||||| Sbjct: 8672 cgtggctggaaaccaccagttcgacggcagtttttcttggattgcaatgaaattgcagat 8613 Query: 431 ctgtgtgatagtgccgaaaggatattttcaagtgaaccaagtgtcataaagcttaaagct 490 || ||||||||||| || ||||||||||| || ||||||| ||| ||| |||||| || Sbjct: 8612 ctttgtgatagtgcagagaggatattttccagcgaaccaactgttatacagcttagggca 8553 Query: 491 cccattaagatatttggtgatttgcatggtcaatttgg 528 || ||||| |||||||||||||| ||||| || ||||| Sbjct: 8552 ccaattaaaatatttggtgatttacatgggcagtttgg 8515
>gb|AC147405.7| Medicago truncatula clone mth2-146n5, complete sequence Length = 147062 Score = 119 bits (60), Expect = 1e-23 Identities = 123/144 (85%) Strand = Plus / Plus Query: 206 ttaggtggcatggttaggcagctgtcaattgatcagtttgaaaatgaaggaagaagggtt 265 ||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||| Sbjct: 137649 ttaggtggcatggttaggcagctttcaattgatcagtttgaaaatgaaggcagacgggtc 137708 Query: 266 atctatggcactcctgagaatgcaactgcagctagaaaattactggatagacaaatgtct 325 | ||||| ||||| || | ||||||||| |||||||| ||| | ||| | || |||||| Sbjct: 137709 agttatgggactccagaaagtgcaactgctgctagaaagttattagatcggcagatgtct 137768 Query: 326 attaatagtgtgcccaaaaaggta 349 || |||||||| || || |||||| Sbjct: 137769 atcaatagtgtcccaaagaaggta 137792 Score = 83.8 bits (42), Expect = 6e-13 Identities = 129/158 (81%) Strand = Plus / Plus Query: 371 cgtggttggaagccccctgtacgaaggcaattcttcctggactgtaatgagatagcagat 430 ||||| ||||| || || || ||| |||| || ||| |||| || ||||| || |||||| Sbjct: 138391 cgtggctggaaaccaccagttcgacggcagtttttcttggattgcaatgaaattgcagat 138450 Query: 431 ctgtgtgatagtgccgaaaggatattttcaagtgaaccaagtgtcataaagcttaaagct 490 || ||||||||||| || ||||||||||| || ||||||| ||| ||| |||||| || Sbjct: 138451 ctttgtgatagtgcagagaggatattttccagcgaaccaactgttatacagcttagggca 138510 Query: 491 cccattaagatatttggtgatttgcatggtcaatttgg 528 || ||||| |||||||||||||| ||||| || ||||| Sbjct: 138511 ccaattaaaatatttggtgatttacatgggcagtttgg 138548
>gb|AC130810.14| Medicago truncatula clone mth2-36b14, complete sequence Length = 117901 Score = 119 bits (60), Expect = 1e-23 Identities = 123/144 (85%) Strand = Plus / Plus Query: 206 ttaggtggcatggttaggcagctgtcaattgatcagtttgaaaatgaaggaagaagggtt 265 ||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||| Sbjct: 63255 ttaggtggcatggttaggcagctttcaattgatcagtttgaaaatgaaggcagacgggtc 63314 Query: 266 atctatggcactcctgagaatgcaactgcagctagaaaattactggatagacaaatgtct 325 | ||||| ||||| || | ||||||||| |||||||| ||| | ||| | || |||||| Sbjct: 63315 agttatgggactccagaaagtgcaactgctgctagaaagttattagatcggcagatgtct 63374 Query: 326 attaatagtgtgcccaaaaaggta 349 || |||||||| || || |||||| Sbjct: 63375 atcaatagtgtcccaaagaaggta 63398 Score = 83.8 bits (42), Expect = 6e-13 Identities = 129/158 (81%) Strand = Plus / Plus Query: 371 cgtggttggaagccccctgtacgaaggcaattcttcctggactgtaatgagatagcagat 430 ||||| ||||| || || || ||| |||| || ||| |||| || ||||| || |||||| Sbjct: 63997 cgtggctggaaaccaccagttcgacggcagtttttcttggattgcaatgaaattgcagat 64056 Query: 431 ctgtgtgatagtgccgaaaggatattttcaagtgaaccaagtgtcataaagcttaaagct 490 || ||||||||||| || ||||||||||| || ||||||| ||| ||| |||||| || Sbjct: 64057 ctttgtgatagtgcagagaggatattttccagcgaaccaactgttatacagcttagggca 64116 Query: 491 cccattaagatatttggtgatttgcatggtcaatttgg 528 || ||||| |||||||||||||| ||||| || ||||| Sbjct: 64117 ccaattaaaatatttggtgatttacatgggcagtttgg 64154
>ref|NM_128279.3| Arabidopsis thaliana hydrolase/ protein serine/threonine phosphatase AT2G27210 mRNA, complete cds Length = 3816 Score = 117 bits (59), Expect = 4e-23 Identities = 344/439 (78%) Strand = Plus / Plus Query: 167 catagagcagttgtggtagcagcagaaacaggaggtgccttaggtggcatggttaggcag 226 |||||||| || ||||| || ||||||||||| || ||||||||||| |||||||| ||| Sbjct: 2052 catagagctgtggtggttgctgcagaaacaggtggagccttaggtggaatggttagacag 2111 Query: 227 ctgtcaattgatcagtttgaaaatgaaggaagaagggttatctatggcactcctgagaat 286 | || |||||||| ||||||||||| ||| | | |||| ||||| || || || | | Sbjct: 2112 ttatccattgatcaatttgaaaatgagggacgccgtgttagttatgggacacccgaaagt 2171 Query: 287 gcaactgcagctagaaaattactggatagacaaatgtctattaatagtgtgcccaaaaag 346 ||||| |||||||| |||||| | ||| | || ||||| || |||||||| || |||||| Sbjct: 2172 gcaacagcagctaggaaattattagatcgtcagatgtcaatcaatagtgttccgaaaaag 2231 Query: 347 gtaattgcctctctcttgaaaccccgtggttggaagccccctgtacgaaggcaattcttc 406 || | || ||| ||||| || || || |||||||| || || || | || || ||| Sbjct: 2232 gttgtagctcatcttttgaagcctcgggggtggaagcctccagttcgtcgccagtttttc 2291 Query: 407 ctggactgtaatgagatagcagatctgtgtgatagtgccgaaaggatattttcaagtgaa 466 |||| || ||||| ||||| ||||| || || ||||| ||| | || || ||||| ||| Sbjct: 2292 ttggattgcaatgaaatagctgatctttgcgacagtgcagaacgtatcttctcaagcgaa 2351 Query: 467 ccaagtgtcataaagcttaaagctcccattaagatatttggtgatttgcatggtcaattt 526 || | ||| || ||||||||||||| |||||||||||||||||||||||||| || ||| Sbjct: 2352 cctactgtgttacagcttaaagctcctattaagatatttggtgatttgcatggccagttt 2411 Query: 527 ggtgacttaatgcgcttattcgacgagtatggtgctccctcaacagcaggagatattgct 586 || || | |||||| | || || || |||||| | || |||||||| ||||| || | Sbjct: 2412 ggggatctcatgcgcctttttgatgaatatggttcaccatcaacagctggagacatatca 2471 Query: 587 tacattgattatctcttct 605 ||||| ||||| ||||||| Sbjct: 2472 tacatcgattacctcttct 2490
>ref|NM_100715.2| Arabidopsis thaliana hydrolase/ protein serine/threonine phosphatase AT1G08420 mRNA, complete cds Length = 3243 Score = 115 bits (58), Expect = 2e-22 Identities = 286/362 (79%) Strand = Plus / Plus Query: 167 catagagcagttgtggtagcagcagaaacaggaggtgccttaggtggcatggttaggcag 226 |||||||| || ||||| || || ||||| || || ||||||||||| |||||||| ||| Sbjct: 2002 catagagctgtggtggttgctgctgaaactggtggcgccttaggtggaatggttagacag 2061 Query: 227 ctgtcaattgatcagtttgaaaatgaaggaagaagggttatctatggcactcctgagaat 286 | || |||||||| ||||||||||| ||| | | || | ||||| || || || | | Sbjct: 2062 ttatccattgatcaatttgaaaatgagggacggcgtgtcagttatgggacaccagaaagt 2121 Query: 287 gcaactgcagctagaaaattactggatagacaaatgtctattaatagtgtgcccaaaaag 346 ||||| ||||| || ||| || | ||| |||||||||| || || ||||| || || ||| Sbjct: 2122 gcaacagcagcaaggaaactattagatcgacaaatgtcaatcaacagtgttccaaagaag 2181 Query: 347 gtaattgcctctctcttgaaaccccgtggttggaagccccctgtacgaaggcaattcttc 406 || || || ||| ||||| || |||||||||||||| ||||| ||| |||| || ||| Sbjct: 2182 gttatagctcatcttttgaagcctcgtggttggaagcctcctgttcgacggcagtttttc 2241 Query: 407 ctggactgtaatgagatagcagatctgtgtgatagtgccgaaaggatattttcaagtgaa 466 || || || ||||| ||||| ||||| ||||||||||| ||| | || || |||||||| Sbjct: 2242 ctagattgcaatgaaatagctgatctttgtgatagtgcagaacgtatcttcgcaagtgaa 2301 Query: 467 ccaagtgtcataaagcttaaagctcccattaagatatttggtgatttgcatggtcaattt 526 || | ||| || ||||||||||||| || || |||||||||||| ||||||| || ||| Sbjct: 2302 ccgactgtattacagcttaaagctcctatcaaaatatttggtgatctgcatgggcagttt 2361 Query: 527 gg 528 || Sbjct: 2362 gg 2363
>gb|AC133862.6| Medicago truncatula clone mth2-30d7, complete sequence Length = 130054 Score = 111 bits (56), Expect = 3e-21 Identities = 173/212 (81%) Strand = Plus / Minus Query: 359 ctcttgaaaccccgtggttggaagccccctgtacgaaggcaattcttcctggactgtaat 418 ||||| || |||||||| ||||| || || ||||| ||||||| ||| | ||||||||| Sbjct: 18255 ctcttaaagccccgtggatggaaacctccagtacgccggcaatttttcttagactgtaat 18196 Query: 419 gagatagcagatctgtgtgatagtgccgaaaggatattttcaagtgaaccaagtgtcata 478 || || || ||||| ||||| ||||| || |||||||||||||||||||||||||| || Sbjct: 18195 gaaattgctgatctttgtgacagtgctgagcggatattttcaagtgaaccaagtgtctta 18136 Query: 479 aagcttaaagctcccattaagatatttggtgatttgcatggtcaatttggtgacttaatg 538 | |||| || || ||||| |||||||||||||| ||||| || ||||| || | ||| Sbjct: 18135 caacttagtgcaccaattaaaatatttggtgatttacatggccagtttggggatctcatg 18076 Query: 539 cgcttattcgacgagtatggtgctccctcaac 570 ||| | || |||||||||||||| || ||||| Sbjct: 18075 cgcctttttgacgagtatggtgcaccatcaac 18044 Score = 107 bits (54), Expect = 4e-20 Identities = 135/162 (83%) Strand = Plus / Minus Query: 188 gcagaaacaggaggtgccttaggtggcatggttaggcagctgtcaattgatcagtttgaa 247 |||||||| || || || ||||| ||||||||||||||||| ||||||||||| |||||| Sbjct: 18732 gcagaaactggtggagcattaggcggcatggttaggcagctttcaattgatcaatttgaa 18673 Query: 248 aatgaaggaagaagggttatctatggcactcctgagaatgcaactgcagctagaaaatta 307 |||||||| || | || | || || ||||| || ||||||||||| |||||||||||| Sbjct: 18672 aatgaaggcaggcgcgtcagttacgggactccggaaaatgcaactgctgctagaaaatta 18613 Query: 308 ctggatagacaaatgtctattaatagtgtgcccaaaaaggta 349 | ||| | || ||||| || ||||||||||| ||||||||| Sbjct: 18612 ttagatcggcagatgtccatcaatagtgtgccaaaaaaggta 18571
>gb|AC124957.18| Medicago truncatula clone mth2-15k14, complete sequence Length = 140624 Score = 111 bits (56), Expect = 3e-21 Identities = 173/212 (81%) Strand = Plus / Plus Query: 359 ctcttgaaaccccgtggttggaagccccctgtacgaaggcaattcttcctggactgtaat 418 ||||| || |||||||| ||||| || || ||||| ||||||| ||| | ||||||||| Sbjct: 127248 ctcttaaagccccgtggatggaaacctccagtacgccggcaatttttcttagactgtaat 127307 Query: 419 gagatagcagatctgtgtgatagtgccgaaaggatattttcaagtgaaccaagtgtcata 478 || || || ||||| ||||| ||||| || |||||||||||||||||||||||||| || Sbjct: 127308 gaaattgctgatctttgtgacagtgctgagcggatattttcaagtgaaccaagtgtctta 127367 Query: 479 aagcttaaagctcccattaagatatttggtgatttgcatggtcaatttggtgacttaatg 538 | |||| || || ||||| |||||||||||||| ||||| || ||||| || | ||| Sbjct: 127368 caacttagtgcaccaattaaaatatttggtgatttacatggccagtttggggatctcatg 127427 Query: 539 cgcttattcgacgagtatggtgctccctcaac 570 ||| | || |||||||||||||| || ||||| Sbjct: 127428 cgcctttttgacgagtatggtgcaccatcaac 127459 Score = 107 bits (54), Expect = 4e-20 Identities = 135/162 (83%) Strand = Plus / Plus Query: 188 gcagaaacaggaggtgccttaggtggcatggttaggcagctgtcaattgatcagtttgaa 247 |||||||| || || || ||||| ||||||||||||||||| ||||||||||| |||||| Sbjct: 126771 gcagaaactggtggagcattaggcggcatggttaggcagctttcaattgatcaatttgaa 126830 Query: 248 aatgaaggaagaagggttatctatggcactcctgagaatgcaactgcagctagaaaatta 307 |||||||| || | || | || || ||||| || ||||||||||| |||||||||||| Sbjct: 126831 aatgaaggcaggcgcgtcagttacgggactccggaaaatgcaactgctgctagaaaatta 126890 Query: 308 ctggatagacaaatgtctattaatagtgtgcccaaaaaggta 349 | ||| | || ||||| || ||||||||||| ||||||||| Sbjct: 126891 ttagatcggcagatgtccatcaatagtgtgccaaaaaaggta 126932
>gb|AC006932.8|AC006932 Genomic sequence for Arabidopsis thaliana BAC T27G7 from chromosome I, complete sequence Length = 89479 Score = 93.7 bits (47), Expect = 6e-16 Identities = 137/167 (82%) Strand = Plus / Plus Query: 362 ttgaaaccccgtggttggaagccccctgtacgaaggcaattcttcctggactgtaatgag 421 ||||| || |||||||||||||| ||||| ||| |||| || ||||| || || ||||| Sbjct: 35565 ttgaagcctcgtggttggaagcctcctgttcgacggcagtttttcctagattgcaatgaa 35624 Query: 422 atagcagatctgtgtgatagtgccgaaaggatattttcaagtgaaccaagtgtcataaag 481 ||||| ||||| ||||||||||| ||| | || || |||||||||| | ||| || || Sbjct: 35625 atagctgatctttgtgatagtgcagaacgtatcttcgcaagtgaaccgactgtattacag 35684 Query: 482 cttaaagctcccattaagatatttggtgatttgcatggtcaatttgg 528 ||||||||||| || || |||||||||||| ||||||| || ||||| Sbjct: 35685 cttaaagctcctatcaaaatatttggtgatctgcatgggcagtttgg 35731 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 203 gccttaggtggcatggttaggcagctgtcaattgatcagtttgaaaatga 252 ||||||||||| |||||||| ||| | || |||||||| ||||||||||| Sbjct: 35068 gccttaggtggaatggttagacagttatccattgatcaatttgaaaatga 35117
>gb|AC007290.6| Arabidopsis thaliana chromosome 2 clone T22O13 map B68, complete sequence Length = 30219 Score = 79.8 bits (40), Expect = 1e-11 Identities = 139/172 (80%) Strand = Plus / Minus Query: 179 gtggtagcagcagaaacaggaggtgccttaggtggcatggttaggcagctgtcaattgat 238 ||||| || ||||||||||| || ||||||||||| |||||||| ||| | || |||||| Sbjct: 7359 gtggttgctgcagaaacaggtggagccttaggtggaatggttagacagttatccattgat 7300 Query: 239 cagtttgaaaatgaaggaagaagggttatctatggcactcctgagaatgcaactgcagct 298 || ||||||||||| ||| | | |||| ||||| || || || | |||||| |||||| Sbjct: 7299 caatttgaaaatgagggacgccgtgttagttatgggacacccgaaagtgcaacagcagct 7240 Query: 299 agaaaattactggatagacaaatgtctattaatagtgtgcccaaaaaggtaa 350 || |||||| | ||| | || ||||| || |||||||| || |||||||||| Sbjct: 7239 aggaaattattagatcgtcagatgtcaatcaatagtgttccgaaaaaggtaa 7188 Score = 73.8 bits (37), Expect = 6e-10 Identities = 46/49 (93%) Strand = Plus / Minus Query: 480 agcttaaagctcccattaagatatttggtgatttgcatggtcaatttgg 528 ||||||||||||| |||||||||||||||||||||||||| || ||||| Sbjct: 6778 agcttaaagctcctattaagatatttggtgatttgcatggccagtttgg 6730
>ref|NM_116542.2| Arabidopsis thaliana hydrolase/ protein serine/threonine phosphatase AT4G03080 mRNA, complete cds Length = 3517 Score = 46.1 bits (23), Expect = 0.13 Identities = 65/79 (82%) Strand = Plus / Plus Query: 501 tatttggtgatttgcatggtcaatttggtgacttaatgcgcttattcgacgagtatggtg 560 ||||||| ||| | ||||| |||||||| || |||||||| ||||| || || ||||| Sbjct: 2027 tatttggcgatctccatgggcaatttggcgatttaatgcgtttatttgatgaatatggat 2086 Query: 561 ctccctcaacagcaggaga 579 |||||||||||| ||||| Sbjct: 2087 ttccctcaacagctggaga 2105
>gb|AF069442.1| Arabidopsis thaliana BAC T4I9, chromosome IV, near 17 cM, complete sequence Length = 98913 Score = 46.1 bits (23), Expect = 0.13 Identities = 65/79 (82%) Strand = Plus / Plus Query: 501 tatttggtgatttgcatggtcaatttggtgacttaatgcgcttattcgacgagtatggtg 560 ||||||| ||| | ||||| |||||||| || |||||||| ||||| || || ||||| Sbjct: 21569 tatttggcgatctccatgggcaatttggcgatttaatgcgtttatttgatgaatatggat 21628 Query: 561 ctccctcaacagcaggaga 579 |||||||||||| ||||| Sbjct: 21629 ttccctcaacagctggaga 21647
>emb|AL390839.33| Human DNA sequence from clone RP11-214L19 on chromosome 1 Contains a novel gene, complete sequence Length = 92253 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 500 atatttggtgatttgcatggtca 522 ||||||||||||||||||||||| Sbjct: 25103 atatttggtgatttgcatggtca 25125
>emb|AL161496.2|ATCHRIV8 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 8 Length = 195429 Score = 46.1 bits (23), Expect = 0.13 Identities = 65/79 (82%) Strand = Plus / Minus Query: 501 tatttggtgatttgcatggtcaatttggtgacttaatgcgcttattcgacgagtatggtg 560 ||||||| ||| | ||||| |||||||| || |||||||| ||||| || || ||||| Sbjct: 12918 tatttggcgatctccatgggcaatttggcgatttaatgcgtttatttgatgaatatggat 12859 Query: 561 ctccctcaacagcaggaga 579 |||||||||||| ||||| Sbjct: 12858 ttccctcaacagctggaga 12840
>gb|AY126992.1| Arabidopsis thaliana AT4g03080/T4I9_4 mRNA, complete cds Length = 3215 Score = 46.1 bits (23), Expect = 0.13 Identities = 65/79 (82%) Strand = Plus / Plus Query: 501 tatttggtgatttgcatggtcaatttggtgacttaatgcgcttattcgacgagtatggtg 560 ||||||| ||| | ||||| |||||||| || |||||||| ||||| || || ||||| Sbjct: 2031 tatttggcgatctccatgggcaatttggcgatttaatgcgtttatttgatgaatatggat 2090 Query: 561 ctccctcaacagcaggaga 579 |||||||||||| ||||| Sbjct: 2091 ttccctcaacagctggaga 2109
>gb|AY105786.1| Zea mays PCO072281 mRNA sequence Length = 1610 Score = 44.1 bits (22), Expect = 0.53 Identities = 86/106 (81%), Gaps = 1/106 (0%) Strand = Plus / Plus Query: 501 tatttggtgatttgcatggtcaatttggtgacttaatgcg-cttattcgacgagtatggt 559 ||||||||||| | ||||| || ||||| ||||||||||| ||| || || ||||||||| Sbjct: 116 tatttggtgatcttcatgggcagtttggggacttaatgcgccttttttgatgagtatggt 175 Query: 560 gctccctcaacagcaggagatattgcttacattgattatctcttct 605 ||| ||||| || || || || | || |||||||||||||||| Sbjct: 176 tttccgtcaactgctggtgacataacgtatattgattatctcttct 221
>gb|AC016493.14| Homo sapiens chromosome 18, clone RP11-58G13, complete sequence Length = 163936 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 172 agcagttgtggtagcagcagaaaca 196 ||||||||||| ||||||||||||| Sbjct: 124610 agcagttgtggaagcagcagaaaca 124586
>gb|AC023577.6| Homo sapiens chromosome 18, clone RP11-645D5, complete sequence Length = 166503 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 172 agcagttgtggtagcagcagaaaca 196 ||||||||||| ||||||||||||| Sbjct: 14875 agcagttgtggaagcagcagaaaca 14851
>dbj|AK120211.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013039A16, full insert sequence Length = 3402 Score = 42.1 bits (21), Expect = 2.1 Identities = 84/105 (80%) Strand = Plus / Plus Query: 501 tatttggtgatttgcatggtcaatttggtgacttaatgcgcttattcgacgagtatggtg 560 ||||||||||| | ||||| || ||||| ||| |||||||| | || || || |||||| Sbjct: 1888 tatttggtgatcttcatgggcagtttggggacctaatgcgcctttttgatgaatatggtt 1947 Query: 561 ctccctcaacagcaggagatattgcttacattgattatctcttct 605 ||| ||||| || || ||||| | || |||||||||||||||| Sbjct: 1948 atccatcaactgctggtgatataacgtatattgattatctcttct 1992
>gb|AC158767.3| Mus musculus chromosome 1, clone RP24-128E5, complete sequence Length = 188758 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 447 aaaggatattttcaagtgaa 466 |||||||||||||||||||| Sbjct: 140934 aaaggatattttcaagtgaa 140953
>gb|AF026198.1| Fugu rubripes neural cell adhesion molecule L1 homolog (L1-CAM) gene, complete cds; putative protein 1 (PUT1) gene, partial cds; mitosis-specific chromosome segregation protein SMC1 homolog (SMC1) gene, complete cds; and calcium channel alpha-1 subunit homolog (CCA1) and putative protein 2 (PUT2) genes, partial cds, complete sequence Length = 63155 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 133 caattcaacaccacctcccg 152 |||||||||||||||||||| Sbjct: 27874 caattcaacaccacctcccg 27855
>ref|NM_009419.2| Mus musculus protein-tyrosine sulfotransferase 2 (Tpst2), mRNA Length = 1829 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 446 gaaaggatattttcaagtgaacca 469 ||||||||||||||| |||||||| Sbjct: 1275 gaaaggatattttcaggtgaacca 1298
>gb|BC003721.1| Mus musculus protein-tyrosine sulfotransferase 2, mRNA (cDNA clone MGC:5752 IMAGE:3494892), complete cds Length = 1829 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 446 gaaaggatattttcaagtgaacca 469 ||||||||||||||| |||||||| Sbjct: 1275 gaaaggatattttcaggtgaacca 1298
>gb|BC017509.1| Homo sapiens tyrosylprotein sulfotransferase 2, mRNA (cDNA clone MGC:23597 IMAGE:4857366), complete cds Length = 1884 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 446 gaaaggatattttcaagtgaacca 469 ||||||||||||||| |||||||| Sbjct: 1274 gaaaggatattttcaggtgaacca 1297
>ref|XM_543458.2| PREDICTED: Canis familiaris similar to tyrosylprotein sulfotransferase 2 (LOC486332), mRNA Length = 1819 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 446 gaaaggatattttcaagtgaacca 469 ||||||||||||||| |||||||| Sbjct: 1284 gaaaggatattttcaggtgaacca 1307
>ref|XM_534585.2| PREDICTED: Canis familiaris similar to zinc finger protein 75 (LOC477391), mRNA Length = 1238 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 tcctgagaatgcaactgcag 296 |||||||||||||||||||| Sbjct: 117 tcctgagaatgcaactgcag 136
>ref|XM_817476.1| Trypanosoma brucei TREU927 ABC transporter (Tb10.70.4330) partial mRNA Length = 2172 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 169 tagagcagttgtggtagcagcagaaaca 196 ||||||||||| || ||||||||||||| Sbjct: 1310 tagagcagttgcggcagcagcagaaaca 1337
>gb|AC141846.3| Homo sapiens chromosome 16 clone CTB-55P19, complete sequence Length = 261450 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 403 cttcctggactgtaatgaga 422 |||||||||||||||||||| Sbjct: 65976 cttcctggactgtaatgaga 65957
>gb|BC086518.1| Rattus norvegicus tyrosylprotein sulfotransferase 2, mRNA (cDNA clone MGC:105657 IMAGE:7302513), complete cds Length = 1771 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 446 gaaaggatattttcaagtgaacca 469 ||||||||||||||| |||||||| Sbjct: 1233 gaaaggatattttcaggtgaacca 1256
>gb|AC127358.3| Mus musculus BAC clone RP23-109B9 from chromosome 18, complete sequence Length = 162003 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 251 gaaggaagaagggttatctatggc 274 ||||||||||||||||| |||||| Sbjct: 121249 gaaggaagaagggttatatatggc 121226
>ref|NM_001008508.1| Rattus norvegicus tyrosylprotein sulfotransferase 2 (Tpst2), mRNA Length = 1771 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 446 gaaaggatattttcaagtgaacca 469 ||||||||||||||| |||||||| Sbjct: 1233 gaaaggatattttcaggtgaacca 1256
>gb|AE017245.1| Mycoplasma synoviae 53, complete genome Length = 799476 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 482 cttaaagctcccattaagatattt 505 ||||||||| |||||||||||||| Sbjct: 792495 cttaaagctaccattaagatattt 792518
>emb|CR848661.5| Zebrafish DNA sequence from clone CH211-187B9 in linkage group 15, complete sequence Length = 149649 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 447 aaaggatattttcaagtgaa 466 |||||||||||||||||||| Sbjct: 148315 aaaggatattttcaagtgaa 148334
>emb|AL669814.16| Mouse DNA sequence from clone RP23-431J18 on chromosome 11 Contains the 5' end of the Ranbp17 gene for RAN binding protein 17, the Gabrp gene for gamma-aminobutyric acid (GABA-A) receptor, pi, the 3' end of the Kcnip1 gene for Kv channel-interacting protein 1 and a CpG island, complete sequence Length = 198320 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 501 tatttggtgatttgcatggt 520 |||||||||||||||||||| Sbjct: 60585 tatttggtgatttgcatggt 60566
>emb|AL136623.2|HSM801596 Homo sapiens mRNA; cDNA DKFZp564B212 (from clone DKFZp564B212) Length = 1880 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 446 gaaaggatattttcaagtgaacca 469 ||||||||||||||| |||||||| Sbjct: 1294 gaaaggatattttcaggtgaacca 1317
>emb|CR626262.1| full-length cDNA clone CS0DI019YP04 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1651 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 446 gaaaggatattttcaagtgaacca 469 ||||||||||||||| |||||||| Sbjct: 1076 gaaaggatattttcaggtgaacca 1099
>emb|CR626067.1| full-length cDNA clone CS0DI084YL14 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1841 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 446 gaaaggatattttcaagtgaacca 469 ||||||||||||||| |||||||| Sbjct: 1347 gaaaggatattttcaggtgaacca 1370
>emb|CR626027.1| full-length cDNA clone CS0DI013YJ01 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1878 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 446 gaaaggatattttcaagtgaacca 469 ||||||||||||||| |||||||| Sbjct: 1330 gaaaggatattttcaggtgaacca 1353
>emb|CR619205.1| full-length cDNA clone CS0DI064YJ10 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1840 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 446 gaaaggatattttcaagtgaacca 469 ||||||||||||||| |||||||| Sbjct: 1291 gaaaggatattttcaggtgaacca 1314
>emb|CR610531.1| full-length cDNA clone CS0DI013YH08 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1870 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 446 gaaaggatattttcaagtgaacca 469 ||||||||||||||| |||||||| Sbjct: 1342 gaaaggatattttcaggtgaacca 1365
>emb|CR610140.1| full-length cDNA clone CS0DI011YG24 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1846 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 446 gaaaggatattttcaagtgaacca 469 ||||||||||||||| |||||||| Sbjct: 1317 gaaaggatattttcaggtgaacca 1340
>emb|CR609089.1| full-length cDNA clone CS0DI069YC05 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1458 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 446 gaaaggatattttcaagtgaacca 469 ||||||||||||||| |||||||| Sbjct: 911 gaaaggatattttcaggtgaacca 934
>emb|CR604977.1| full-length cDNA clone CS0DL008YK09 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1820 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 446 gaaaggatattttcaagtgaacca 469 ||||||||||||||| |||||||| Sbjct: 1291 gaaaggatattttcaggtgaacca 1314
>emb|CR606597.1| full-length cDNA clone CS0DI053YJ06 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1909 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 446 gaaaggatattttcaagtgaacca 469 ||||||||||||||| |||||||| Sbjct: 1343 gaaaggatattttcaggtgaacca 1366
>emb|CR604203.1| full-length cDNA clone CS0DE002YN05 of Placenta of Homo sapiens (human) Length = 1883 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 446 gaaaggatattttcaagtgaacca 469 ||||||||||||||| |||||||| Sbjct: 1352 gaaaggatattttcaggtgaacca 1375
>dbj|AK057557.1| Homo sapiens cDNA FLJ32995 fis, clone THYMU1000136 Length = 2682 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 451 gatattttcaagtgaaccaa 470 |||||||||||||||||||| Sbjct: 1481 gatattttcaagtgaaccaa 1500
>dbj|AK074538.1| Homo sapiens cDNA FLJ90057 fis, clone HEMBA1003101, highly similar to Homo sapiens tyrosylprotein sulfotransferase-2 mRNA Length = 1896 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 446 gaaaggatattttcaagtgaacca 469 ||||||||||||||| |||||||| Sbjct: 1310 gaaaggatattttcaggtgaacca 1333
>dbj|AK075139.1| Homo sapiens cDNA FLJ90658 fis, clone PLACE1004775, highly similar to Homo sapiens tyrosylprotein sulfotransferase-2 mRNA Length = 1940 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 446 gaaaggatattttcaagtgaacca 469 ||||||||||||||| |||||||| Sbjct: 1382 gaaaggatattttcaggtgaacca 1405
>emb|CR596688.1| full-length cDNA clone CS0DI011YL08 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1861 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 446 gaaaggatattttcaagtgaacca 469 ||||||||||||||| |||||||| Sbjct: 1335 gaaaggatattttcaggtgaacca 1358
>emb|CR596364.1| full-length cDNA clone CS0DI018YO21 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1903 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 446 gaaaggatattttcaagtgaacca 469 ||||||||||||||| |||||||| Sbjct: 1373 gaaaggatattttcaggtgaacca 1396
>emb|CR595821.1| full-length cDNA clone CS0DI032YN03 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1879 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 446 gaaaggatattttcaagtgaacca 469 ||||||||||||||| |||||||| Sbjct: 1335 gaaaggatattttcaggtgaacca 1358
>emb|CR595659.1| full-length cDNA clone CS0DI078YD07 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1892 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 446 gaaaggatattttcaagtgaacca 469 ||||||||||||||| |||||||| Sbjct: 1343 gaaaggatattttcaggtgaacca 1366
>emb|CR595650.1| full-length cDNA clone CS0DJ013YH14 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1796 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 446 gaaaggatattttcaagtgaacca 469 ||||||||||||||| |||||||| Sbjct: 1245 gaaaggatattttcaggtgaacca 1268
>emb|CR593537.1| full-length cDNA clone CS0DI023YJ21 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1024 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 446 gaaaggatattttcaagtgaacca 469 ||||||||||||||| |||||||| Sbjct: 497 gaaaggatattttcaggtgaacca 520
>emb|CR590775.1| full-length cDNA clone CS0DI049YH20 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1856 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 446 gaaaggatattttcaagtgaacca 469 ||||||||||||||| |||||||| Sbjct: 1303 gaaaggatattttcaggtgaacca 1326
>dbj|AK150082.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530127A14 product:protein-tyrosine sulfotransferase 2, full insert sequence Length = 1767 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 446 gaaaggatattttcaagtgaacca 469 ||||||||||||||| |||||||| Sbjct: 1244 gaaaggatattttcaggtgaacca 1267
>gb|AC013640.7| Homo sapiens chromosome 15, clone RP11-16L14, complete sequence Length = 149555 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 446 gaaaggatattttcaagtgaacca 469 ||||||||||||||| |||||||| Sbjct: 27713 gaaaggatattttcaggtgaacca 27690
>dbj|AK149502.1| Mus musculus adult male liver tumor cDNA, RIKEN full-length enriched library, clone:C730026M21 product:protein-tyrosine sulfotransferase 2, full insert sequence Length = 1778 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 446 gaaaggatattttcaagtgaacca 469 ||||||||||||||| |||||||| Sbjct: 1249 gaaaggatattttcaggtgaacca 1272
>dbj|AK163461.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230119D01 product:protein-tyrosine sulfotransferase 2, full insert sequence Length = 1716 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 446 gaaaggatattttcaagtgaacca 469 ||||||||||||||| |||||||| Sbjct: 1248 gaaaggatattttcaggtgaacca 1271
>emb|CR533528.1| Homo sapiens full open reading frame cDNA clone RZPDo834H0119D for gene TPST2, tyrosylprotein sulfotransferase 2; complete cds, incl. stopcodon Length = 1252 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 446 gaaaggatattttcaagtgaacca 469 ||||||||||||||| |||||||| Sbjct: 1077 gaaaggatattttcaggtgaacca 1100
>dbj|AB168595.1| Macaca fascicularis testis cDNA clone: QtsA-13311, similar to human tyrosylprotein sulfotransferase 2 (TPST2), mRNA, RefSeq: NM_003595.2 Length = 2066 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 446 gaaaggatattttcaagtgaacca 469 ||||||||||||||| |||||||| Sbjct: 1500 gaaaggatattttcaggtgaacca 1523
>dbj|AK036436.1| Mus musculus adult male bone cDNA, RIKEN full-length enriched library, clone:9830107O18 product:protein-tyrosine sulfotransferase 2, full insert sequence Length = 1742 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 446 gaaaggatattttcaagtgaacca 469 ||||||||||||||| |||||||| Sbjct: 1213 gaaaggatattttcaggtgaacca 1236
>gb|AC092721.2| Homo sapiens chromosome 16 clone RP11-514P19, complete sequence Length = 201382 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 403 cttcctggactgtaatgaga 422 |||||||||||||||||||| Sbjct: 27736 cttcctggactgtaatgaga 27717
>dbj|AK075672.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1110062A05 product:protein-tyrosine sulfotransferase 2, full insert sequence Length = 1812 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 446 gaaaggatattttcaagtgaacca 469 ||||||||||||||| |||||||| Sbjct: 1284 gaaaggatattttcaggtgaacca 1307
>ref|XM_623384.1| PREDICTED: Apis mellifera similar to GA20923-PA (LOC550940), mRNA Length = 3547 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 1 agtgctactttggctgctgtaaag 24 ||||||||||||| |||||||||| Sbjct: 1951 agtgctactttggatgctgtaaag 1974
>ref|XM_623286.1| PREDICTED: Apis mellifera similar to GA20923-PA (LOC550940), mRNA Length = 3726 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 1 agtgctactttggctgctgtaaag 24 ||||||||||||| |||||||||| Sbjct: 2130 agtgctactttggatgctgtaaag 2153
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 tgttgctcttgcaaacaatt 137 |||||||||||||||||||| Sbjct: 5877302 tgttgctcttgcaaacaatt 5877283
>gb|AC023820.6| Homo sapiens chromosome 16 clone RP11-1103K14, complete sequence Length = 133537 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 403 cttcctggactgtaatgaga 422 |||||||||||||||||||| Sbjct: 61482 cttcctggactgtaatgaga 61463
>gb|AC084450.1|AC084450 Caenorhabditis briggsae cosmid CB022A21, complete sequence Length = 59533 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 235 tgatcagtttgaaaatgaaggaag 258 |||||||||||||||||| ||||| Sbjct: 55874 tgatcagtttgaaaatgacggaag 55897
>gb|AC138356.3| Homo sapiens chromosome 8, clone RP11-863K10, complete sequence Length = 190274 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 451 gatattttcaagtgaaccaa 470 |||||||||||||||||||| Sbjct: 86178 gatattttcaagtgaaccaa 86159
>dbj|BA000013.4| Mesorhizobium loti MAFF303099 pMLa DNA, cpmplete genome Length = 351911 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 463 tgaaccaagtgtcataaagc 482 |||||||||||||||||||| Sbjct: 261277 tgaaccaagtgtcataaagc 261258
>ref|NM_003595.3| Homo sapiens tyrosylprotein sulfotransferase 2 (TPST2), transcript variant 2, mRNA Length = 1910 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 446 gaaaggatattttcaagtgaacca 469 ||||||||||||||| |||||||| Sbjct: 1310 gaaaggatattttcaggtgaacca 1333
>ref|NM_001008566.1| Homo sapiens tyrosylprotein sulfotransferase 2 (TPST2), transcript variant 1, mRNA Length = 2018 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 446 gaaaggatattttcaagtgaacca 469 ||||||||||||||| |||||||| Sbjct: 1418 gaaaggatattttcaggtgaacca 1441
>gb|AY954968.1| Bacteriophage X2, complete genome Length = 43440 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 actggatagacaaatgtcta 326 |||||||||||||||||||| Sbjct: 20710 actggatagacaaatgtcta 20729
>gb|AY954967.1| Bacteriophage 92, complete genome Length = 42431 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 actggatagacaaatgtcta 326 |||||||||||||||||||| Sbjct: 20879 actggatagacaaatgtcta 20898
>gb|AY954966.1| Bacteriophage 88, complete genome Length = 43231 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 actggatagacaaatgtcta 326 |||||||||||||||||||| Sbjct: 20882 actggatagacaaatgtcta 20901
>gb|AY954965.1| Bacteriophage 52A, complete genome Length = 41690 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 actggatagacaaatgtcta 326 |||||||||||||||||||| Sbjct: 21073 actggatagacaaatgtcta 21092
>gb|AY954964.1| Bacteriophage 29, complete genome Length = 42802 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 actggatagacaaatgtcta 326 |||||||||||||||||||| Sbjct: 20996 actggatagacaaatgtcta 21015
>gb|AY954963.1| Bacteriophage 55, complete genome Length = 41902 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 actggatagacaaatgtcta 326 |||||||||||||||||||| Sbjct: 20843 actggatagacaaatgtcta 20862
>gb|AY954962.1| Bacteriophage 71, complete genome Length = 43114 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 actggatagacaaatgtcta 326 |||||||||||||||||||| Sbjct: 20712 actggatagacaaatgtcta 20731
>gb|AY954961.1| Bacteriophage ROSA, complete genome Length = 43155 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 actggatagacaaatgtcta 326 |||||||||||||||||||| Sbjct: 21921 actggatagacaaatgtcta 21940
>gb|AY954960.1| Bacteriophage 96, complete genome Length = 43576 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 actggatagacaaatgtcta 326 |||||||||||||||||||| Sbjct: 21196 actggatagacaaatgtcta 21215
>gb|AC067961.8| Homo sapiens BAC clone RP11-59F3 from 2, complete sequence Length = 105884 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 496 taagatatttggtgatttgc 515 |||||||||||||||||||| Sbjct: 81427 taagatatttggtgatttgc 81408
>dbj|AP003052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0016I09 Length = 148517 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 tgttgctcttgcaaacaatt 137 |||||||||||||||||||| Sbjct: 81043 tgttgctcttgcaaacaatt 81024
>dbj|AK204832.1| Mus musculus cDNA, clone:Y1G0149M03, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000068184, based on BLAT search Length = 190 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 446 gaaaggatattttcaagtgaacca 469 ||||||||||||||| |||||||| Sbjct: 39 gaaaggatattttcaggtgaacca 62
>emb|AJ332629.1|HSA332629 Homo sapiens genomic sequence surrounding NotI site, clone NR3-BE3C Length = 701 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 gcatggttaggcagctgtca 232 |||||||||||||||||||| Sbjct: 118 gcatggttaggcagctgtca 137
>emb|CT797314.2| Pan troglodytes chromosome X clone CH251-171B18 map Xq28, complete sequence Length = 178731 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 516 atggtcaatttggtgactta 535 |||||||||||||||||||| Sbjct: 49509 atggtcaatttggtgactta 49528
>gb|AC117771.17| Mus musculus chromosome 1, clone RP24-512A5, complete sequence Length = 161292 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 447 aaaggatattttcaagtgaa 466 |||||||||||||||||||| Sbjct: 56913 aaaggatattttcaagtgaa 56894
>gb|AC007429.11|AC007429 Homo sapiens, clone hRPK.70_A_1, complete sequence Length = 160025 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 446 gaaaggatattttcaagtgaacca 469 ||||||||||||||| |||||||| Sbjct: 5843 gaaaggatattttcaggtgaacca 5820
>emb|CR456597.1| Homo sapiens TPST2 full length open reading frame (ORF) cDNA clone (cDNA clone C22ORF:pGEM.TPST2.V3) Length = 1251 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 446 gaaaggatattttcaagtgaacca 469 ||||||||||||||| |||||||| Sbjct: 1172 gaaaggatattttcaggtgaacca 1195
>gb|AF049891.1|AF049891 Homo sapiens tyrosylprotein sulfotransferase-2 mRNA, complete cds Length = 1855 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 446 gaaaggatattttcaagtgaacca 469 ||||||||||||||| |||||||| Sbjct: 1274 gaaaggatattttcaggtgaacca 1297
>gb|AF049890.1|AF049890 Mus musculus tyrosylprotein sulfotransferase-2 mRNA, complete cds Length = 1760 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 446 gaaaggatattttcaagtgaacca 469 ||||||||||||||| |||||||| Sbjct: 1230 gaaaggatattttcaggtgaacca 1253
>gb|AF061254.1|AF061254 Homo sapiens tyrosylprotein sulfotransferase-2 mRNA, complete cds Length = 1194 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 446 gaaaggatattttcaagtgaacca 469 ||||||||||||||| |||||||| Sbjct: 1082 gaaaggatattttcaggtgaacca 1105
>emb|CR974484.9| Mouse DNA sequence from clone RP23-1D11 on chromosome 12, complete sequence Length = 203805 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 551 gagtatggtgctccctcaac 570 |||||||||||||||||||| Sbjct: 72450 gagtatggtgctccctcaac 72431
>gb|BC001057.2| Homo sapiens tyrosylprotein sulfotransferase 2, mRNA (cDNA clone MGC:1931 IMAGE:3509627), complete cds Length = 1880 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 446 gaaaggatattttcaagtgaacca 469 ||||||||||||||| |||||||| Sbjct: 1289 gaaaggatattttcaggtgaacca 1312
>emb|AJ938182.1| Staphylococcus aureus RF122 complete genome Length = 2742531 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 actggatagacaaatgtcta 326 |||||||||||||||||||| Sbjct: 1849508 actggatagacaaatgtcta 1849489
>dbj|AP007299.1| Lotus japonicus genomic DNA, clone:LjT30I08, TM0492, complete sequence Length = 106844 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 cctgagaatgcaactgcagc 297 |||||||||||||||||||| Sbjct: 85635 cctgagaatgcaactgcagc 85654
>emb|AJ006198.1|HSA6198 Homo sapiens mRNA for tyrosyl sulfotransferase-2 Length = 1762 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 446 gaaaggatattttcaagtgaacca 469 ||||||||||||||| |||||||| Sbjct: 1164 gaaaggatattttcaggtgaacca 1187
>dbj|AP001553.1| Bacteriophage phi ETA DNA, complete genome Length = 43081 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 actggatagacaaatgtcta 326 |||||||||||||||||||| Sbjct: 37732 actggatagacaaatgtcta 37751
>dbj|AP000065.1| Homo sapiens genomic DNA, chromosome 8p11.2, senescence gene region, section 1/19 Length = 100000 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 451 gatattttcaagtgaaccaa 470 |||||||||||||||||||| Sbjct: 90544 gatattttcaagtgaaccaa 90525 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,768,226 Number of Sequences: 3902068 Number of extensions: 5768226 Number of successful extensions: 103017 Number of sequences better than 10.0: 107 Number of HSP's better than 10.0 without gapping: 106 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 102713 Number of HSP's gapped (non-prelim): 301 length of query: 605 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 582 effective length of database: 17,143,297,704 effective search space: 9977399263728 effective search space used: 9977399263728 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
