ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd24a10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK073091.1| Oryza sativa (japonica cultivar-group) cDNA clon... 488 e-134
2dbj|AK063182.1| Oryza sativa (japonica cultivar-group) cDNA clon... 355 1e-94
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 125 2e-25
4gb|AC107619.1| Genomic sequence for Oryza sativa, Nipponbare str... 125 2e-25
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 125 2e-25
6gb|AY555143.1| Zea may BAC clone c573L14, complete sequence 119 1e-23
7dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 103 6e-19
8gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 103 6e-19
9emb|AL732650.5|CNS08C9P Oryza sativa chromosome 12, . BAC OSJNBa... 103 6e-19
10gb|AY017776.1| Oryza sativa microsatellite MRG0101 containing (A... 96 1e-16
11gb|AY106246.1| Zea mays PCO105094 mRNA sequence 86 1e-13
12ref|NM_122623.2| Arabidopsis thaliana catalytic AT5G27410 mRNA, ... 60 8e-06
13gb|BT000517.1| Arabidopsis thaliana putative branched-chain amin... 60 8e-06
14gb|AF367323.1| Arabidopsis thaliana AT5g27410/F21A20_120 mRNA, c... 60 8e-06
15dbj|AP006127.1| Lotus japonicus genomic DNA, chromosome 5, clone... 58 3e-05
16ref|NM_111392.3| Arabidopsis thaliana catalytic AT3G05190 mRNA, ... 52 0.002
17gb|AC009177.7|ATAC009177 Arabidopsis thaliana chromosome III BAC... 52 0.002
18gb|AY090279.1| Arabidopsis thaliana AT3g05190/T12H1_16 mRNA, com... 52 0.002
19gb|AF462849.1|AF462849 Arabidopsis thaliana putative branched-ch... 52 0.002
20emb|BX824318.1|CNS0A5LC Arabidopsis thaliana Full-length cDNA Co... 52 0.002
21gb|BT013120.1| Lycopersicon esculentum clone 114410F, mRNA sequence 46 0.12
22emb|Z99110.2|BSUB0007 Bacillus subtilis complete genome (section... 44 0.48
23gb|AF034138.1|AF034138 Bacillus subtilis yjoB gene, partial cds;... 44 0.48
24gb|AC019195.10| Homo sapiens BAC clone RP11-355K7 from 2, comple... 44 0.48
25emb|X56679.1|BSGSIAAB B.subtilis gsiAA and gsiAB genes 44 0.48
26gb|AC136288.23| Medicago truncatula clone mth2-13o7, complete se... 42 1.9
27emb|CR937046.1|PT147K15 Pan troglodytes chromosome 11 BAC PTB-14... 42 1.9
28gb|AC134522.9| Medicago truncatula clone mth2-12g4, complete seq... 42 1.9
29gb|AC138059.3| Homo sapiens chromosome 3 clone RP11-195M4, compl... 42 1.9
30gb|AC137673.2| Homo sapiens chromosome 3 clone CTD-2195M5, compl... 42 1.9
31gb|AC161450.3| Mus musculus BAC clone RP24-75I4 from chromosome ... 40 7.5
32gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome 40 7.5
33gb|AC140927.2| Mus musculus BAC clone RP23-409D19 from chromosom... 40 7.5
34gb|AC162916.3| Mus musculus BAC clone RP23-395G18 from chromosom... 40 7.5
35emb|AL160036.12| Human DNA sequence from clone RP11-555C15 on ch... 40 7.5
36emb|AL023285.1|HS474A14 Human DNA sequence from clone RP3-474A14... 40 7.5
37ref|XM_965827.1| PREDICTED: Tribolium castaneum similar to CG136... 40 7.5
38gb|AF534707.1| Lechevalieria aerocolonigenes putative regulatory... 40 7.5
39gb|AC026469.8| Homo sapiens chromosome 16 clone RP11-442O1, comp... 40 7.5
40gb|AC099617.13| Mus musculus chromosome 15, clone RP23-445J4, co... 40 7.5
41gb|AF318277.1|AF318277 Enterococcus faecalis aromatic amino acid... 40 7.5
42gb|AE016830.1| Enterococcus faecalis V583, complete genome 40 7.5
43emb|AL772308.4| Mouse DNA sequence from clone RP23-451I21 on chr... 40 7.5 
>dbj|AK073091.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033022E01, full
           insert sequence
          Length = 2712

 Score =  488 bits (246), Expect = e-134
 Identities = 408/462 (88%), Gaps = 5/462 (1%)
 Strand = Plus / Plus

                                                                       
Query: 95  agccggcggtgatccacgcgtggtcggcgccgcgctccctcagcaccagcctcatgtact 154
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 agccggtggtgatccacgcgtggtcggcgccgcgctccctcagcaccagcctcatgtact 170

                                                                       
Query: 155 ccttctcccagagggatgacatggatgtgcttgacgagcctctctacgctaatttcctgc 214
           ||||| ||||||||||||||||||| ||||| |||||||| |||||||||||||||||||
Sbjct: 171 ccttcgcccagagggatgacatggaggtgctcgacgagccgctctacgctaatttcctgc 230

                                                                       
Query: 215 gtgtcactggcgttgacaggccctatcgccaggagcttctctctaaaat-----ggatcc 269
           | ||||| ||||| |||||||| |||||| |||||||||| ||||| ||     ||||||
Sbjct: 231 gcgtcaccggcgtcgacaggccgtatcgcgaggagcttctgtctaacatgtgcaggatcc 290

                                                                       
Query: 270 tgatggcaacaaagttgtcaaagaagtcatttttggaccaggagagaaagcatatcgtta 329
           |||||| ||||||||| |||  |||||||||||||| |||||  ||| |  |||||||||
Sbjct: 291 tgatggtaacaaagttatcagtgaagtcatttttgggccagggaagagaaaatatcgtta 350

                                                                       
Query: 330 ctgcaagcacattgcgaagcagcgcctccctaatctcacaggtgacctgatgaagaaggg 389
           ||||||||||||||| ||||||||||||||||| ||  || ||||||||||||| |||||
Sbjct: 351 ctgcaagcacattgcaaagcagcgcctccctaacctgtcaagtgacctgatgaaaaaggg 410

                                                                       
Query: 390 aaaacatttcatattaatacgtaaccctatgaatatccttccgtcatttgataaagttgt 449
           ||||||||||||||| ||||| |||||| | |||||||| || |||||||| ||||| ||
Sbjct: 411 aaaacatttcatattgatacgcaaccctctaaatatcctgccatcatttgacaaagtcgt 470

                                                                       
Query: 450 tccaccatccttcctggagctcggtgtagcagaacttgtcgcaatatacagtgagttgtg 509
            |||||||| ||| | ||||||||  |||| ||||||||| | ||||||||||| |||||
Sbjct: 471 cccaccatcattctttgagctcggcatagcggaacttgtctcgatatacagtgaattgtg 530

                                                     
Query: 510 tgatcttgggagccctccacctgtgatagatgcagatgatct 551
           ||| |||||||||||||| ||||||||||||||||| |||||
Sbjct: 531 tgagcttgggagccctccgcctgtgatagatgcagacgatct 572
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>dbj|AK063182.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-112-A12, full
           insert sequence
          Length = 396

 Score =  355 bits (179), Expect = 1e-94
 Identities = 260/287 (90%)
 Strand = Plus / Plus

                                                                       
Query: 95  agccggcggtgatccacgcgtggtcggcgccgcgctccctcagcaccagcctcatgtact 154
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 agccggtggtgatccacgcgtggtcggcgccgcgctccctcagcaccagcctcatgtact 169

                                                                       
Query: 155 ccttctcccagagggatgacatggatgtgcttgacgagcctctctacgctaatttcctgc 214
           ||||| ||||||||||||||||||| ||||| |||||||| |||||||||||||||||||
Sbjct: 170 ccttcgcccagagggatgacatggaggtgctcgacgagccgctctacgctaatttcctgc 229

                                                                       
Query: 215 gtgtcactggcgttgacaggccctatcgccaggagcttctctctaaaatggatcctgatg 274
           | ||||| ||||| |||||||| |||||| |||||||||| ||||| |||||||||||||
Sbjct: 230 gcgtcaccggcgtcgacaggccgtatcgcgaggagcttctgtctaacatggatcctgatg 289

                                                                       
Query: 275 gcaacaaagttgtcaaagaagtcatttttggaccaggagagaaagcatatcgttactgca 334
           | ||||||||| |||  |||||||||||||| |||||  ||| |  ||||||||||||||
Sbjct: 290 gtaacaaagttatcagtgaagtcatttttgggccagggaagagaaaatatcgttactgca 349

                                                          
Query: 335 agcacattgcgaagcagcgcctccctaatctcacaggtgacctgatg 381
           |||||||||| ||||||||||||||||| ||  || |||||||||||
Sbjct: 350 agcacattgcaaagcagcgcctccctaacctgtcaagtgacctgatg 396
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  125 bits (63), Expect = 2e-25
 Identities = 69/71 (97%)
 Strand = Plus / Minus

                                                                            
Query: 95       agccggcggtgatccacgcgtggtcggcgccgcgctccctcagcaccagcctcatgtact 154
                |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13786887 agccggtggtgatccacgcgtggtcggcgccgcgctccctcagcaccagcctcatgtact 13786828

                           
Query: 155      ccttctcccag 165
                ||||| |||||
Sbjct: 13786827 ccttcgcccag 13786817



 Score =  123 bits (62), Expect = 7e-25
 Identities = 92/102 (90%)
 Strand = Plus / Minus

                                                                            
Query: 164      agagggatgacatggatgtgcttgacgagcctctctacgctaatttcctgcgtgtcactg 223
                |||||||||||||||| ||||| |||||||| |||||||||||||||||||| ||||| |
Sbjct: 13786628 agagggatgacatggaggtgctcgacgagccgctctacgctaatttcctgcgcgtcaccg 13786569

                                                          
Query: 224      gcgttgacaggccctatcgccaggagcttctctctaaaatgg 265
                |||| |||||||| |||||| |||||||||| ||||| ||||
Sbjct: 13786568 gcgtcgacaggccgtatcgcgaggagcttctgtctaacatgg 13786527



 Score =  117 bits (59), Expect = 4e-23
 Identities = 104/119 (87%)
 Strand = Plus / Minus

                                                                            
Query: 433      tcatttgataaagttgttccaccatccttcctggagctcggtgtagcagaacttgtcgca 492
                |||||||| ||||| || |||||||| ||| | ||||||||  |||| ||||||||| | 
Sbjct: 13785707 tcatttgacaaagtcgtcccaccatcattctttgagctcggcatagcggaacttgtctcg 13785648

                                                                           
Query: 493      atatacagtgagttgtgtgatcttgggagccctccacctgtgatagatgcagatgatct 551
                ||||||||||| |||||||| |||||||||||||| ||||||||||||||||| |||||
Sbjct: 13785647 atatacagtgaattgtgtgagcttgggagccctccgcctgtgatagatgcagacgatct 13785589



 Score =  107 bits (54), Expect = 4e-20
 Identities = 84/94 (89%)
 Strand = Plus / Minus

                                                                            
Query: 335      agcacattgcgaagcagcgcctccctaatctcacaggtgacctgatgaagaagggaaaac 394
                |||||||||| ||||||||||||||||| ||  || ||||||||||||| ||||||||||
Sbjct: 13785922 agcacattgcaaagcagcgcctccctaacctgtcaagtgacctgatgaaaaagggaaaac 13785863

                                                  
Query: 395      atttcatattaatacgtaaccctatgaatatcct 428
                |||||||||| ||||| |||||| | ||||||||
Sbjct: 13785862 atttcatattgatacgcaaccctctaaatatcct 13785829



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 63/73 (86%)
 Strand = Plus / Minus

                                                                            
Query: 264      ggatcctgatggcaacaaagttgtcaaagaagtcatttttggaccaggagagaaagcata 323
                |||||||||||| ||||||||| |||  |||||||||||||| |||||  ||| |  |||
Sbjct: 13786069 ggatcctgatggtaacaaagttatcagtgaagtcatttttgggccagggaagagaaaata 13786010

                             
Query: 324      tcgttactgcaag 336
                |||||||||||||
Sbjct: 13786009 tcgttactgcaag 13785997
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>gb|AC107619.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0048D11, from chromosome 3, complete sequence
          Length = 158911

 Score =  125 bits (63), Expect = 2e-25
 Identities = 69/71 (97%)
 Strand = Plus / Minus

                                                                         
Query: 95    agccggcggtgatccacgcgtggtcggcgccgcgctccctcagcaccagcctcatgtact 154
             |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63415 agccggtggtgatccacgcgtggtcggcgccgcgctccctcagcaccagcctcatgtact 63356

                        
Query: 155   ccttctcccag 165
             ||||| |||||
Sbjct: 63355 ccttcgcccag 63345



 Score =  123 bits (62), Expect = 7e-25
 Identities = 92/102 (90%)
 Strand = Plus / Minus

                                                                         
Query: 164   agagggatgacatggatgtgcttgacgagcctctctacgctaatttcctgcgtgtcactg 223
             |||||||||||||||| ||||| |||||||| |||||||||||||||||||| ||||| |
Sbjct: 63156 agagggatgacatggaggtgctcgacgagccgctctacgctaatttcctgcgcgtcaccg 63097

                                                       
Query: 224   gcgttgacaggccctatcgccaggagcttctctctaaaatgg 265
             |||| |||||||| |||||| |||||||||| ||||| ||||
Sbjct: 63096 gcgtcgacaggccgtatcgcgaggagcttctgtctaacatgg 63055



 Score =  117 bits (59), Expect = 4e-23
 Identities = 104/119 (87%)
 Strand = Plus / Minus

                                                                         
Query: 433   tcatttgataaagttgttccaccatccttcctggagctcggtgtagcagaacttgtcgca 492
             |||||||| ||||| || |||||||| ||| | ||||||||  |||| ||||||||| | 
Sbjct: 62235 tcatttgacaaagtcgtcccaccatcattctttgagctcggcatagcggaacttgtctcg 62176

                                                                        
Query: 493   atatacagtgagttgtgtgatcttgggagccctccacctgtgatagatgcagatgatct 551
             ||||||||||| |||||||| |||||||||||||| ||||||||||||||||| |||||
Sbjct: 62175 atatacagtgaattgtgtgagcttgggagccctccgcctgtgatagatgcagacgatct 62117



 Score =  107 bits (54), Expect = 4e-20
 Identities = 84/94 (89%)
 Strand = Plus / Minus

                                                                         
Query: 335   agcacattgcgaagcagcgcctccctaatctcacaggtgacctgatgaagaagggaaaac 394
             |||||||||| ||||||||||||||||| ||  || ||||||||||||| ||||||||||
Sbjct: 62450 agcacattgcaaagcagcgcctccctaacctgtcaagtgacctgatgaaaaagggaaaac 62391

                                               
Query: 395   atttcatattaatacgtaaccctatgaatatcct 428
             |||||||||| ||||| |||||| | ||||||||
Sbjct: 62390 atttcatattgatacgcaaccctctaaatatcct 62357



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 63/73 (86%)
 Strand = Plus / Minus

                                                                         
Query: 264   ggatcctgatggcaacaaagttgtcaaagaagtcatttttggaccaggagagaaagcata 323
             |||||||||||| ||||||||| |||  |||||||||||||| |||||  ||| |  |||
Sbjct: 62597 ggatcctgatggtaacaaagttatcagtgaagtcatttttgggccagggaagagaaaata 62538

                          
Query: 324   tcgttactgcaag 336
             |||||||||||||
Sbjct: 62537 tcgttactgcaag 62525
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  125 bits (63), Expect = 2e-25
 Identities = 69/71 (97%)
 Strand = Plus / Minus

                                                                            
Query: 95       agccggcggtgatccacgcgtggtcggcgccgcgctccctcagcaccagcctcatgtact 154
                |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13781862 agccggtggtgatccacgcgtggtcggcgccgcgctccctcagcaccagcctcatgtact 13781803

                           
Query: 155      ccttctcccag 165
                ||||| |||||
Sbjct: 13781802 ccttcgcccag 13781792



 Score =  123 bits (62), Expect = 7e-25
 Identities = 92/102 (90%)
 Strand = Plus / Minus

                                                                            
Query: 164      agagggatgacatggatgtgcttgacgagcctctctacgctaatttcctgcgtgtcactg 223
                |||||||||||||||| ||||| |||||||| |||||||||||||||||||| ||||| |
Sbjct: 13781603 agagggatgacatggaggtgctcgacgagccgctctacgctaatttcctgcgcgtcaccg 13781544

                                                          
Query: 224      gcgttgacaggccctatcgccaggagcttctctctaaaatgg 265
                |||| |||||||| |||||| |||||||||| ||||| ||||
Sbjct: 13781543 gcgtcgacaggccgtatcgcgaggagcttctgtctaacatgg 13781502



 Score =  117 bits (59), Expect = 4e-23
 Identities = 104/119 (87%)
 Strand = Plus / Minus

                                                                            
Query: 433      tcatttgataaagttgttccaccatccttcctggagctcggtgtagcagaacttgtcgca 492
                |||||||| ||||| || |||||||| ||| | ||||||||  |||| ||||||||| | 
Sbjct: 13780682 tcatttgacaaagtcgtcccaccatcattctttgagctcggcatagcggaacttgtctcg 13780623

                                                                           
Query: 493      atatacagtgagttgtgtgatcttgggagccctccacctgtgatagatgcagatgatct 551
                ||||||||||| |||||||| |||||||||||||| ||||||||||||||||| |||||
Sbjct: 13780622 atatacagtgaattgtgtgagcttgggagccctccgcctgtgatagatgcagacgatct 13780564



 Score =  107 bits (54), Expect = 4e-20
 Identities = 84/94 (89%)
 Strand = Plus / Minus

                                                                            
Query: 335      agcacattgcgaagcagcgcctccctaatctcacaggtgacctgatgaagaagggaaaac 394
                |||||||||| ||||||||||||||||| ||  || ||||||||||||| ||||||||||
Sbjct: 13780897 agcacattgcaaagcagcgcctccctaacctgtcaagtgacctgatgaaaaagggaaaac 13780838

                                                  
Query: 395      atttcatattaatacgtaaccctatgaatatcct 428
                |||||||||| ||||| |||||| | ||||||||
Sbjct: 13780837 atttcatattgatacgcaaccctctaaatatcct 13780804



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 63/73 (86%)
 Strand = Plus / Minus

                                                                            
Query: 264      ggatcctgatggcaacaaagttgtcaaagaagtcatttttggaccaggagagaaagcata 323
                |||||||||||| ||||||||| |||  |||||||||||||| |||||  ||| |  |||
Sbjct: 13781044 ggatcctgatggtaacaaagttatcagtgaagtcatttttgggccagggaagagaaaata 13780985

                             
Query: 324      tcgttactgcaag 336
                |||||||||||||
Sbjct: 13780984 tcgttactgcaag 13780972
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>gb|AY555143.1| Zea may BAC clone c573L14, complete sequence
          Length = 144792

 Score =  119 bits (60), Expect = 1e-23
 Identities = 102/116 (87%)
 Strand = Plus / Minus

                                                                          
Query: 436    tttgataaagttgttccaccatccttcctggagctcggtgtagcagaacttgtcgcaata 495
              ||||||||||| ||||||||||||||| ||||||| ||  |||  ||||||||| |||||
Sbjct: 117270 tttgataaagtcgttccaccatccttcatggagcttggcataggcgaacttgtctcaata 117211

                                                                      
Query: 496    tacagtgagttgtgtgatcttgggagccctccacctgtgatagatgcagatgatct 551
              |||||||| || ||||  ||||||||||| || |||||||||||||||||||||||
Sbjct: 117210 tacagtgaattatgtggacttgggagcccaccccctgtgatagatgcagatgatct 117155



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 42/45 (93%)
 Strand = Plus / Minus

                                                           
Query: 373    gacctgatgaagaagggaaaacatttcatattaatacgtaaccct 417
              ||||| |||||||||||||||||||||||||| ||||| ||||||
Sbjct: 117550 gacctcatgaagaagggaaaacatttcatattgatacggaaccct 117506



 Score = 50.1 bits (25), Expect = 0.008
 Identities = 58/69 (84%)
 Strand = Plus / Minus

                                                                          
Query: 268    cctgatggcaacaaagttgtcaaagaagtcatttttggaccaggagagaaagcatatcgt 327
              |||||||| || || ||||||||||| || |||||||| ||||| || |||   ||||||
Sbjct: 117743 cctgatggaaataaggttgtcaaagaggtgatttttggcccaggggacaaaaagtatcgt 117684

                       
Query: 328    tactgcaag 336
              |||||||||
Sbjct: 117683 tactgcaag 117675
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  103 bits (52), Expect = 6e-19
 Identities = 88/100 (88%)
 Strand = Plus / Minus

                                                                            
Query: 166      agggatgacatggatgtgcttgacgagcctctctacgctaatttcctgcgtgtcactggc 225
                |||||||||||||| ||||| |||||||| |||||||||||||||||||  |||||||||
Sbjct: 11393289 agggatgacatggaggtgctcgacgagccgctctacgctaatttcctgcaagtcactggc 11393230

                                                        
Query: 226      gttgacaggccctatcgccaggagcttctctctaaaatgg 265
                || |||||||| |||| |  ||||||||| ||||| ||||
Sbjct: 11393229 gtcgacaggccatatcacgcggagcttctttctaacatgg 11393190



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 63/71 (88%), Gaps = 1/71 (1%)
 Strand = Plus / Minus

                                                                            
Query: 95       agccggcggtgatccacgcgtggtcggcgccgcgctccctcagcaccagcctcatgtact 154
                |||||| |||||| |||||||| |||||| ||| |||||||||||||||| |||||||||
Sbjct: 11397559 agccggtggtgattcacgcgtgttcggcgtcgc-ctccctcagcaccagcatcatgtact 11397501

                           
Query: 155      ccttctcccag 165
                | ||| |||||
Sbjct: 11397500 cattcacccag 11397490
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  103 bits (52), Expect = 6e-19
 Identities = 88/100 (88%)
 Strand = Plus / Minus

                                                                            
Query: 166      agggatgacatggatgtgcttgacgagcctctctacgctaatttcctgcgtgtcactggc 225
                |||||||||||||| ||||| |||||||| |||||||||||||||||||  |||||||||
Sbjct: 11392960 agggatgacatggaggtgctcgacgagccgctctacgctaatttcctgcaagtcactggc 11392901

                                                        
Query: 226      gttgacaggccctatcgccaggagcttctctctaaaatgg 265
                || |||||||| |||| |  ||||||||| ||||| ||||
Sbjct: 11392900 gtcgacaggccatatcacgcggagcttctttctaacatgg 11392861



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 63/71 (88%), Gaps = 1/71 (1%)
 Strand = Plus / Minus

                                                                            
Query: 95       agccggcggtgatccacgcgtggtcggcgccgcgctccctcagcaccagcctcatgtact 154
                |||||| |||||| |||||||| |||||| ||| |||||||||||||||| |||||||||
Sbjct: 11397230 agccggtggtgattcacgcgtgttcggcgtcgc-ctccctcagcaccagcatcatgtact 11397172

                           
Query: 155      ccttctcccag 165
                | ||| |||||
Sbjct: 11397171 cattcacccag 11397161
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>emb|AL732650.5|CNS08C9P Oryza sativa chromosome 12, . BAC OSJNBa0054O08 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 167806

 Score =  103 bits (52), Expect = 6e-19
 Identities = 88/100 (88%)
 Strand = Plus / Plus

                                                                          
Query: 166    agggatgacatggatgtgcttgacgagcctctctacgctaatttcctgcgtgtcactggc 225
              |||||||||||||| ||||| |||||||| |||||||||||||||||||  |||||||||
Sbjct: 143675 agggatgacatggaggtgctcgacgagccgctctacgctaatttcctgcaagtcactggc 143734

                                                      
Query: 226    gttgacaggccctatcgccaggagcttctctctaaaatgg 265
              || |||||||| |||| |  ||||||||| ||||| ||||
Sbjct: 143735 gtcgacaggccatatcacgcggagcttctttctaacatgg 143774



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 63/71 (88%), Gaps = 1/71 (1%)
 Strand = Plus / Plus

                                                                          
Query: 95     agccggcggtgatccacgcgtggtcggcgccgcgctccctcagcaccagcctcatgtact 154
              |||||| |||||| |||||||| |||||| ||| |||||||||||||||| |||||||||
Sbjct: 139405 agccggtggtgattcacgcgtgttcggcgtcgc-ctccctcagcaccagcatcatgtact 139463

                         
Query: 155    ccttctcccag 165
              | ||| |||||
Sbjct: 139464 cattcacccag 139474
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>gb|AY017776.1| Oryza sativa microsatellite MRG0101 containing (AG)X12, closest to
           marker C730, genomic sequence
          Length = 224

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 51/52 (98%)
 Strand = Plus / Plus

                                                               
Query: 95  agccggcggtgatccacgcgtggtcggcgccgcgctccctcagcaccagcct 146
           |||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 agccggtggtgatccacgcgtggtcggcgccgcgctccctcagcaccagcct 224
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>gb|AY106246.1| Zea mays PCO105094 mRNA sequence
          Length = 1477

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 64/71 (90%)
 Strand = Plus / Plus

                                                                       
Query: 481 gaacttgtcgcaatatacagtgagttgtgtgatcttgggagccctccacctgtgatagat 540
           ||||||||| ||||||||||||| || ||||  ||||||||||| || ||||||||||||
Sbjct: 13  gaacttgtctcaatatacagtgaattatgtggacttgggagcccaccccctgtgatagat 72

                      
Query: 541 gcagatgatct 551
           |||||||||||
Sbjct: 73  gcagatgatct 83
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>ref|NM_122623.2| Arabidopsis thaliana catalytic AT5G27410 mRNA, complete cds
          Length = 2023

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 54/62 (87%)
 Strand = Plus / Plus

                                                                       
Query: 133 ctcagcaccagcctcatgtactccttctcccagagggatgacatggatgtgcttgacgag 192
           ||||||||||  ||||||||||||||  ||||||| |||||||| || |||||||| |||
Sbjct: 66  ctcagcaccactctcatgtactcctttgcccagagagatgacattgaagtgcttgatgag 125

             
Query: 193 cc 194
           ||
Sbjct: 126 cc 127
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>gb|BT000517.1| Arabidopsis thaliana putative branched-chain amino acid
           aminotransferase  (At5g27410/F21A20_120) mRNA, complete
           cds
          Length = 1680

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 54/62 (87%)
 Strand = Plus / Plus

                                                                       
Query: 133 ctcagcaccagcctcatgtactccttctcccagagggatgacatggatgtgcttgacgag 192
           ||||||||||  ||||||||||||||  ||||||| |||||||| || |||||||| |||
Sbjct: 37  ctcagcaccactctcatgtactcctttgcccagagagatgacattgaagtgcttgatgag 96

             
Query: 193 cc 194
           ||
Sbjct: 97  cc 98
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>gb|AF367323.1| Arabidopsis thaliana AT5g27410/F21A20_120 mRNA, complete cds
          Length = 1930

 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 54/62 (87%)
 Strand = Plus / Plus

                                                                       
Query: 133 ctcagcaccagcctcatgtactccttctcccagagggatgacatggatgtgcttgacgag 192
           ||||||||||  ||||||||||||||  ||||||| |||||||| || |||||||| |||
Sbjct: 65  ctcagcaccactctcatgtactcctttgcccagagagatgacattgaagtgcttgatgag 124

             
Query: 193 cc 194
           ||
Sbjct: 125 cc 126
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>dbj|AP006127.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT48O21, TM0211,
             complete sequence
          Length = 137303

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 53/61 (86%)
 Strand = Plus / Minus

                                                                         
Query: 164   agagggatgacatggatgtgcttgacgagcctctctacgctaatttcctgcgtgtcactg 223
             ||||||||||||| || ||||| || ||||||||||| ||||| ||||| || |||||||
Sbjct: 65422 agagggatgacattgaagtgctggatgagcctctctatgctaacttccttcgagtcactg 65363

              
Query: 224   g 224
             |
Sbjct: 65362 g 65362
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>ref|NM_111392.3| Arabidopsis thaliana catalytic AT3G05190 mRNA, complete cds
          Length = 2147

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 133 ctcagcaccagcctcatgtactcctt 158
           ||||||||||||||||||||||||||
Sbjct: 106 ctcagcaccagcctcatgtactcctt 131
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>gb|AC009177.7|ATAC009177 Arabidopsis thaliana chromosome III BAC T12H1 genomic sequence,
             complete sequence
          Length = 140064

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                       
Query: 133   ctcagcaccagcctcatgtactcctt 158
             ||||||||||||||||||||||||||
Sbjct: 67503 ctcagcaccagcctcatgtactcctt 67528
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>gb|AY090279.1| Arabidopsis thaliana AT3g05190/T12H1_16 mRNA, complete cds
          Length = 1668

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 133 ctcagcaccagcctcatgtactcctt 158
           ||||||||||||||||||||||||||
Sbjct: 46  ctcagcaccagcctcatgtactcctt 71
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>gb|AF462849.1|AF462849 Arabidopsis thaliana putative branched-chain amino acid
           aminotransferase mRNA, complete cds
          Length = 2133

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 133 ctcagcaccagcctcatgtactcctt 158
           ||||||||||||||||||||||||||
Sbjct: 106 ctcagcaccagcctcatgtactcctt 131
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>emb|BX824318.1|CNS0A5LC Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH39ZG06 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1901

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                     
Query: 133 ctcagcaccagcctcatgtactcctt 158
           ||||||||||||||||||||||||||
Sbjct: 76  ctcagcaccagcctcatgtactcctt 101
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>gb|BT013120.1| Lycopersicon esculentum clone 114410F, mRNA sequence
          Length = 1777

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                          
Query: 130 tccctcagcaccagcctcatgtactccttctcccagagggatgacat 176
           ||||| |||||||||||||||||||| ||  |||||||  |||||||
Sbjct: 68  tccctaagcaccagcctcatgtactcttttgcccagagaaatgacat 114
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>emb|Z99110.2|BSUB0007 Bacillus subtilis complete genome (section 7 of 21): from 1209742 to
              1410982
          Length = 201241

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 383    agaagggaaaacatttcatatt 404
              ||||||||||||||||||||||
Sbjct: 106656 agaagggaaaacatttcatatt 106677
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>gb|AF034138.1|AF034138 Bacillus subtilis yjoB gene, partial cds; aspartate phosphatase of
            the phosphorelay (rapA), pre-inhibitor protein of RapA
            (phrA), yjpA, N-acetylmuramoyl-L-alanine amidase (xlyB),
            yjqA, yjqB, yjqC, and xkdA genes, complete cds
          Length = 5761

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 383  agaagggaaaacatttcatatt 404
            ||||||||||||||||||||||
Sbjct: 1815 agaagggaaaacatttcatatt 1836
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>gb|AC019195.10| Homo sapiens BAC clone RP11-355K7 from 2, complete sequence
          Length = 143823

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 388   ggaaaacatttcatattaatac 409
             ||||||||||||||||||||||
Sbjct: 49232 ggaaaacatttcatattaatac 49253
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>emb|X56679.1|BSGSIAAB B.subtilis gsiAA and gsiAB genes
          Length = 1629

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 383  agaagggaaaacatttcatatt 404
            ||||||||||||||||||||||
Sbjct: 1513 agaagggaaaacatttcatatt 1534
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>gb|AC136288.23| Medicago truncatula clone mth2-13o7, complete sequence
          Length = 110437

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                              
Query: 164   agagggatgacatggatgtgcttgacgagcctctctacgctaatttcct 212
             ||||| |||| || || |||||||| ||||||||||| ||| |||||||
Sbjct: 34041 agaggaatgatattgaagtgcttgatgagcctctctatgctcatttcct 34089
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>emb|CR937046.1|PT147K15 Pan troglodytes chromosome 11 BAC PTB-147K15, complete sequence
          Length = 197298

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 416   ctatgaatatccttccgtcat 436
             |||||||||||||||||||||
Sbjct: 91013 ctatgaatatccttccgtcat 90993
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>gb|AC134522.9| Medicago truncatula clone mth2-12g4, complete sequence
          Length = 129197

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                              
Query: 164   agagggatgacatggatgtgcttgacgagcctctctacgctaatttcct 212
             ||||| |||| || || |||||||| ||||||||||| ||| |||||||
Sbjct: 44300 agaggaatgatattgaagtgcttgatgagcctctctatgctcatttcct 44348
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>gb|AC138059.3| Homo sapiens chromosome 3 clone RP11-195M4, complete sequence
          Length = 191397

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 416    ctatgaatatccttccgtcat 436
              |||||||||||||||||||||
Sbjct: 161147 ctatgaatatccttccgtcat 161127
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>gb|AC137673.2| Homo sapiens chromosome 3 clone CTD-2195M5, complete sequence
          Length = 139791

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 416   ctatgaatatccttccgtcat 436
             |||||||||||||||||||||
Sbjct: 56662 ctatgaatatccttccgtcat 56642
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>gb|AC161450.3| Mus musculus BAC clone RP24-75I4 from chromosome 15, complete sequence
          Length = 198734

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 291   agaagtcatttttggaccaggaga 314
             |||||||||||||||| |||||||
Sbjct: 61129 agaagtcatttttggagcaggaga 61152
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>gb|CP000127.1| Nitrosococcus oceani ATCC 19707, complete genome
          Length = 3481691

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 437     ttgataaagttgttccacca 456
               ||||||||||||||||||||
Sbjct: 1095582 ttgataaagttgttccacca 1095601
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>gb|AC140927.2| Mus musculus BAC clone RP23-409D19 from chromosome 5, complete sequence
          Length = 209257

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 449    ttccaccatccttcctggag 468
              ||||||||||||||||||||
Sbjct: 120970 ttccaccatccttcctggag 120951
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>gb|AC162916.3| Mus musculus BAC clone RP23-395G18 from chromosome 1, complete sequence
          Length = 224904

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 280    aaagttgtcaaagaagtcat 299
              ||||||||||||||||||||
Sbjct: 113562 aaagttgtcaaagaagtcat 113581
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>emb|AL160036.12| Human DNA sequence from clone RP11-555C15 on chromosome 13 Contains part
              of the GPC6 gene for glypican 6, complete sequence
          Length = 173526

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 381    gaagaagggaaaacatttca 400
              ||||||||||||||||||||
Sbjct: 106578 gaagaagggaaaacatttca 106559
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>emb|AL023285.1|HS474A14 Human DNA sequence from clone RP3-474A14 on chromosome 1q24.1-25.2
             Contains the 5' end of the TNR gene for tenascin R
             (restrictin, janusin), complete sequence
          Length = 107352

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 143   gcctcatgtactccttctcc 162
             ||||||||||||||||||||
Sbjct: 96803 gcctcatgtactccttctcc 96822
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>ref|XM_965827.1| PREDICTED: Tribolium castaneum similar to CG13618-PA (LOC659528),
           mRNA
          Length = 940

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 382 aagaagggaaaacatttcat 401
           ||||||||||||||||||||
Sbjct: 626 aagaagggaaaacatttcat 645
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>gb|AF534707.1| Lechevalieria aerocolonigenes putative regulatory protein, putative
           antibiotic antiporter (rbmK), tryptophan halogenase
           (rbmJ), putative transporter (rbmI), flavin dependent
           oxidoreductase (rbmH), putative regulatory protein
           (rbmG), methyltransferase (rbmF), cytochrome P450 enzyme
           (rbmE), putative polyketide hydroxylase (rbmD), VioB
           (rbmC), putative L-tryptophan oxidase (rbmB), putative
           glycosyltransferase (rbmA), hypothetical protein,
           putative esterase, and putative dipeptidase genes,
           complete cds; and unknown gene
          Length = 28654

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 118 tcggcgccgcgctccctcagcaccagcc 145
           |||||||||||||| | |||||||||||
Sbjct: 910 tcggcgccgcgctctcgcagcaccagcc 883
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>gb|AC026469.8| Homo sapiens chromosome 16 clone RP11-442O1, complete sequence
          Length = 199669

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 355   ctccctaatctcacaggtga 374
             ||||||||||||||||||||
Sbjct: 84709 ctccctaatctcacaggtga 84728
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>gb|AC099617.13| Mus musculus chromosome 15, clone RP23-445J4, complete sequence
          Length = 180493

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 291    agaagtcatttttggaccaggaga 314
              |||||||||||||||| |||||||
Sbjct: 168023 agaagtcatttttggagcaggaga 168046
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>gb|AF318277.1|AF318277 Enterococcus faecalis aromatic amino acid biosynthetic gene cluster,
            partial sequence
          Length = 8340

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 480  agaacttgtcgcaatatacagtga 503
            |||||||||||||| |||||||||
Sbjct: 1577 agaacttgtcgcaaaatacagtga 1600
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>gb|AE016830.1| Enterococcus faecalis V583, complete genome
          Length = 3218031

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 480     agaacttgtcgcaatatacagtga 503
               |||||||||||||| |||||||||
Sbjct: 1514831 agaacttgtcgcaaaatacagtga 1514854
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>emb|AL772308.4| Mouse DNA sequence from clone RP23-451I21 on chromosome 15, complete
             sequence
          Length = 148496

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 390   aaaacatttcatattaatac 409
             ||||||||||||||||||||
Sbjct: 89424 aaaacatttcatattaatac 89443


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,558,984
Number of Sequences: 3902068
Number of extensions: 4558984
Number of successful extensions: 91209
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 91002
Number of HSP's gapped (non-prelim): 207
length of query: 556
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 533
effective length of database: 17,143,297,704
effective search space: 9137377676232
effective search space used: 9137377676232
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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