ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd23l09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AY108668.1| Zea mays PCO064352 mRNA sequence 392 e-106
2dbj|AK065464.1| Oryza sativa (japonica cultivar-group) cDNA clon... 387 e-104
3dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 234 3e-58
4dbj|AP005396.3| Oryza sativa (japonica cultivar-group) genomic D... 234 3e-58
5ref|NM_102850.2| Arabidopsis thaliana KUP10; potassium ion trans... 58 3e-05
6gb|AC004793.2|F28K20 Arabidopsis thaliana chromosome 1 BAC F28K2... 58 3e-05
7dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 54 5e-04
8dbj|AP003875.3| Oryza sativa (japonica cultivar-group) genomic D... 54 5e-04
9emb|AJ427981.1|OSA427981 Oryza sativa HAK12 gene for putative po... 54 5e-04
10dbj|AK069377.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 5e-04
11ref|XM_473875.1| Oryza sativa (japonica cultivar-group), predic... 48 0.031
12dbj|AK072123.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.031
13gb|AC115055.9| Mus musculus chromosome 3, clone RP24-346I12, com... 44 0.49
14emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromosome 4,... 44 0.49
15dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.49
16dbj|AK174627.1| Ciona intestinalis cDNA, clone:cigd044o11, full ... 44 0.49
17emb|AJ427980.1|OSA427980 Oryza sativa HAK11 gene for putative po... 44 0.49
18ref|XM_414785.1| PREDICTED: Gallus gallus similar to C330006K01R... 42 1.9
19emb|Z99128.1|HS422H11 Human DNA sequence from clone RP3-422H11 o... 42 1.9
20emb|AL390248.10| Human DNA sequence from clone RP11-492M23 on ch... 42 1.9
21emb|AL356952.18| Human DNA sequence from clone RP11-809M12 on ch... 42 1.9
22gb|AC119899.8| Mus musculus chromosome 5, clone RP24-235E5, comp... 40 7.7
23gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 40 7.7
24gb|AC105773.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.7
25ref|XM_593387.2| PREDICTED: Bos taurus similar to Cell division ... 40 7.7
26ref|XM_879895.1| PREDICTED: Bos taurus similar to Cell division ... 40 7.7
27ref|XM_879869.1| PREDICTED: Bos taurus similar to Cell division ... 40 7.7
28ref|XM_867229.1| PREDICTED: Bos taurus similar to Cell division ... 40 7.7
29ref|XM_879821.1| PREDICTED: Bos taurus similar to Cell division ... 40 7.7
30emb|BX842583.1| Mycobacterium tuberculosis H37Rv complete genome... 40 7.7
31emb|BX248347.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 40 7.7
32gb|DQ114786.1| Schistosoma mansoni CREB-binding protein mRNA, co... 40 7.7
33gb|AC154505.3| Mus musculus BAC clone RP24-92J14 from chromosome... 40 7.7
34dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.7
35gb|AC068492.2| Homo sapiens BAC clone RP11-809C23 from 2, comple... 40 7.7
36gb|AC007564.10| Homo sapiens 12 BAC RP11-513P18 (Roswell Park Ca... 40 7.7
37gb|AC091951.3| Homo sapiens chromosome 5 clone RP11-404K5, compl... 40 7.7
38dbj|AP003126.3| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 7.7

>gb|AY108668.1| Zea mays PCO064352 mRNA sequence
          Length = 1690

 Score =  392 bits (198), Expect = e-106
 Identities = 468/558 (83%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcagattgctttcacgacggttgtgttcccatgtcttcttttgcaatatactggtcaagc 60
           ||||||||||||||||  ||||||||| ||||||||||||||||| ||||| || |||||
Sbjct: 100 gcagattgctttcacggtggttgtgtttccatgtcttcttttgcagtatacaggccaagc 159

                                                                       
Query: 61  tgcctatatagccacgcacaaagacaaagtctcccactccttctatttttctcttccaga 120
           ||||||||||||   | |||||||  | ||||||||  ||||||||||||| ||||||||
Sbjct: 160 tgcctatatagctcagaacaaagatcatgtctcccatgccttctatttttcccttccaga 219

                                                                       
Query: 121 gcgtatactttggccagcatttgttgttgcaacggctgctgcaatagtttctagccaggc 180
              | |||| |||||| ||||  |||||||||| ||||||||||||||| |||| |||||
Sbjct: 220 ttctgtactctggccatcattcattgttgcaacagctgctgcaatagttgctagtcaggc 279

                                                                       
Query: 181 aactatttccgcaacatactcaatcatcaagcaagcgcttgcggtgggctgcttccccag 240
           |||||| ||    ||||| || || ||||||||||| |||||  | || |||||||||||
Sbjct: 280 aactatatcgatgacatattcgattatcaagcaagcacttgctctagggtgcttccccag 339

                                                                       
Query: 241 agtgaagatcatccatacttccaagaagtatcttggccagatatacagccccgatattaa 300
           |||||  || ||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 340 agtgagaattatccatacttccaagaagtatctaggccagatatacagtcccgatattaa 399

                                                                       
Query: 301 ttggatcctcctgattctctgtattgccgtcacggctgggttcaagaatcagtcccagat 360
           ||||||||| ||| |  |||| ||||| ||||| ||||| || || || ||   ||||||
Sbjct: 400 ttggatccttctggtattctgcattgctgtcactgctggatttaaaaaccaaagccagat 459

                                                                       
Query: 361 tgcaaatgcttatggtacagctgtgataatggttatgcttgtgacgacatttctcatgat 420
            |||||||| || ||||| || ||||||||||||||||||||||| ||||||||||||||
Sbjct: 460 agcaaatgcatacggtactgccgtgataatggttatgcttgtgacaacatttctcatgat 519

                                                                       
Query: 421 ccccataatgctgctggtatggcgcagccattgggccttggtcctgctcttcacggtgct 480
           ||| ||||||||| |||| ||||||||||| ||| |||||||| | || ||||| |||||
Sbjct: 520 ccctataatgctgttggtgtggcgcagccactggaccttggtcatcctgttcaccgtgct 579

                                                                       
Query: 481 gtcgctggtcgtcgagatcccgtacttgaccgccgtcatgaagaagattgaccagggcgg 540
           ||| ||| | || || || |||||||| ||||| ||  ||  |||||| |||||||| ||
Sbjct: 580 gtcactgtttgttgaaattccgtacttcaccgctgtggtgcggaagatcgaccagggtgg 639

                             
Query: 541 ctgggttcctctggtgtt 558
           ||||||||| || |||||
Sbjct: 640 ctgggttccacttgtgtt 657



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>dbj|AK065464.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013020H24, full
            insert sequence
          Length = 2893

 Score =  387 bits (195), Expect = e-104
 Identities = 471/563 (83%)
 Strand = Plus / Plus

                                                                        
Query: 2    cagattgctttcacgacggttgtgttcccatgtcttcttttgcaatatactggtcaagct 61
            ||||||||||||||   ||||||||||||||| |||||| |||||||||||||||| |||
Sbjct: 1394 cagattgctttcactgtggttgtgttcccatgccttcttctgcaatatactggtcaggct 1453

                                                                        
Query: 62   gcctatatagccacgcacaaagacaaagtctcccactccttctatttttctcttccagag 121
            || | ||||||  |  ||| | || |||||  |||  |||||||| | || |||||||  
Sbjct: 1454 gcgtttatagctgcaaacacaaaccaagtcagccatgccttctatatctcccttccagct 1513

                                                                        
Query: 122  cgtatactttggccagcatttgttgttgcaacggctgctgcaatagtttctagccaggca 181
            | ||||||||||||||||||||  |||||||| || |||||||||||| |||| ||||| 
Sbjct: 1514 cctatactttggccagcatttgccgttgcaacagcagctgcaatagttgctagtcaggcc 1573

                                                                        
Query: 182  actatttccgcaacatactcaatcatcaagcaagcgcttgcggtgggctgcttccccaga 241
            ||||| || |||||||| || || ||||||||||| |||||  | || ||||| ||| ||
Sbjct: 1574 actatatctgcaacatattcgattatcaagcaagcacttgccctagggtgctttccccga 1633

                                                                        
Query: 242  gtgaagatcatccatacttccaagaagtatcttggccagatatacagccccgatattaat 301
            |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| 
Sbjct: 1634 gtgaagatcatccatacttccaagaagtatctcggccagatatacagccctgatattaac 1693

                                                                        
Query: 302  tggatcctcctgattctctgtattgccgtcacggctgggttcaagaatcagtcccagatt 361
            ||||||||| || || |||| || || ||||| || |||||||| || || |||||||||
Sbjct: 1694 tggatcctcatggttttctgcatagctgtcactgcagggttcaaaaaccaatcccagatt 1753

                                                                        
Query: 362  gcaaatgcttatggtacagctgtgataatggttatgcttgtgacgacatttctcatgatc 421
            |||||||| |||||||| |||||||| ||||||||||||||||| |||||||| ||||||
Sbjct: 1754 gcaaatgcatatggtactgctgtgatcatggttatgcttgtgacaacatttctgatgatc 1813

                                                                        
Query: 422  cccataatgctgctggtatggcgcagccattgggccttggtcctgctcttcacggtgctg 481
            ||||| ||||||||||| ||||| ||||||||| || ||||| |   |||||| ||||||
Sbjct: 1814 cccatcatgctgctggtgtggcgaagccattggaccctggtcgtcgccttcaccgtgctg 1873

                                                                        
Query: 482  tcgctggtcgtcgagatcccgtacttgaccgccgtcatgaagaagattgaccagggcggc 541
            ||  || | || |||||||| |||||  | |||||| ||   ||||| || ||||| || 
Sbjct: 1874 tcattgcttgtggagatcccctacttctcggccgtcgtgcgcaagatcgatcagggagga 1933

                                   
Query: 542  tgggttcctctggtgttcgcggc 564
            |||||||| ||||| ||||||||
Sbjct: 1934 tgggttccgctggttttcgcggc 1956



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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  234 bits (118), Expect = 3e-58
 Identities = 220/254 (86%)
 Strand = Plus / Minus

                                                                            
Query: 124      tatactttggccagcatttgttgttgcaacggctgctgcaatagtttctagccaggcaac 183
                ||||||||||||||||||||  |||||||| || |||||||||||| |||| ||||| ||
Sbjct: 22067971 tatactttggccagcatttgccgttgcaacagcagctgcaatagttgctagtcaggccac 22067912

                                                                            
Query: 184      tatttccgcaacatactcaatcatcaagcaagcgcttgcggtgggctgcttccccagagt 243
                ||| || |||||||| || || ||||||||||| |||||  | || ||||| ||| ||||
Sbjct: 22067911 tatatctgcaacatattcgattatcaagcaagcacttgccctagggtgctttccccgagt 22067852

                                                                            
Query: 244      gaagatcatccatacttccaagaagtatcttggccagatatacagccccgatattaattg 303
                |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||
Sbjct: 22067851 gaagatcatccatacttccaagaagtatctcggccagatatacagccctgatattaactg 22067792

                                                                            
Query: 304      gatcctcctgattctctgtattgccgtcacggctgggttcaagaatcagtcccagattgc 363
                ||||||| || || |||| || || ||||| || |||||||| || || |||||||||||
Sbjct: 22067791 gatcctcatggttttctgcatagctgtcactgcagggttcaaaaaccaatcccagattgc 22067732

                              
Query: 364      aaatgcttatggta 377
                |||||| |||||||
Sbjct: 22067731 aaatgcatatggta 22067718



 Score =  117 bits (59), Expect = 4e-23
 Identities = 158/191 (82%)
 Strand = Plus / Minus

                                                                            
Query: 374      ggtacagctgtgataatggttatgcttgtgacgacatttctcatgatccccataatgctg 433
                ||||| |||||||| ||||||||||||||||| |||||||| ||||||||||| ||||||
Sbjct: 22067611 ggtactgctgtgatcatggttatgcttgtgacaacatttctgatgatccccatcatgctg 22067552

                                                                            
Query: 434      ctggtatggcgcagccattgggccttggtcctgctcttcacggtgctgtcgctggtcgtc 493
                ||||| ||||| ||||||||| || ||||| |   |||||| ||||||||  || | || 
Sbjct: 22067551 ctggtgtggcgaagccattggaccctggtcgtcgccttcaccgtgctgtcattgcttgtg 22067492

                                                                            
Query: 494      gagatcccgtacttgaccgccgtcatgaagaagattgaccagggcggctgggttcctctg 553
                |||||||| |||||  | |||||| ||   ||||| || ||||| || |||||||| |||
Sbjct: 22067491 gagatcccctacttctcggccgtcgtgcgcaagatcgatcagggaggatgggttccgctg 22067432

                           
Query: 554      gtgttcgcggc 564
                || ||||||||
Sbjct: 22067431 gttttcgcggc 22067421



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 63/71 (88%)
 Strand = Plus / Minus

                                                                            
Query: 2        cagattgctttcacgacggttgtgttcccatgtcttcttttgcaatatactggtcaagct 61
                ||||||||||||||   ||||||||||||||| |||||| |||||||||||||||| |||
Sbjct: 22068210 cagattgctttcactgtggttgtgttcccatgccttcttctgcaatatactggtcaggct 22068151

                           
Query: 62       gcctatatagc 72
                || | ||||||
Sbjct: 22068150 gcgtttatagc 22068140



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>dbj|AP005396.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0635G10
          Length = 146728

 Score =  234 bits (118), Expect = 3e-58
 Identities = 220/254 (86%)
 Strand = Plus / Minus

                                                                          
Query: 124    tatactttggccagcatttgttgttgcaacggctgctgcaatagtttctagccaggcaac 183
              ||||||||||||||||||||  |||||||| || |||||||||||| |||| ||||| ||
Sbjct: 110035 tatactttggccagcatttgccgttgcaacagcagctgcaatagttgctagtcaggccac 109976

                                                                          
Query: 184    tatttccgcaacatactcaatcatcaagcaagcgcttgcggtgggctgcttccccagagt 243
              ||| || |||||||| || || ||||||||||| |||||  | || ||||| ||| ||||
Sbjct: 109975 tatatctgcaacatattcgattatcaagcaagcacttgccctagggtgctttccccgagt 109916

                                                                          
Query: 244    gaagatcatccatacttccaagaagtatcttggccagatatacagccccgatattaattg 303
              |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||
Sbjct: 109915 gaagatcatccatacttccaagaagtatctcggccagatatacagccctgatattaactg 109856

                                                                          
Query: 304    gatcctcctgattctctgtattgccgtcacggctgggttcaagaatcagtcccagattgc 363
              ||||||| || || |||| || || ||||| || |||||||| || || |||||||||||
Sbjct: 109855 gatcctcatggttttctgcatagctgtcactgcagggttcaaaaaccaatcccagattgc 109796

                            
Query: 364    aaatgcttatggta 377
              |||||| |||||||
Sbjct: 109795 aaatgcatatggta 109782



 Score =  117 bits (59), Expect = 4e-23
 Identities = 158/191 (82%)
 Strand = Plus / Minus

                                                                          
Query: 374    ggtacagctgtgataatggttatgcttgtgacgacatttctcatgatccccataatgctg 433
              ||||| |||||||| ||||||||||||||||| |||||||| ||||||||||| ||||||
Sbjct: 109675 ggtactgctgtgatcatggttatgcttgtgacaacatttctgatgatccccatcatgctg 109616

                                                                          
Query: 434    ctggtatggcgcagccattgggccttggtcctgctcttcacggtgctgtcgctggtcgtc 493
              ||||| ||||| ||||||||| || ||||| |   |||||| ||||||||  || | || 
Sbjct: 109615 ctggtgtggcgaagccattggaccctggtcgtcgccttcaccgtgctgtcattgcttgtg 109556

                                                                          
Query: 494    gagatcccgtacttgaccgccgtcatgaagaagattgaccagggcggctgggttcctctg 553
              |||||||| |||||  | |||||| ||   ||||| || ||||| || |||||||| |||
Sbjct: 109555 gagatcccctacttctcggccgtcgtgcgcaagatcgatcagggaggatgggttccgctg 109496

                         
Query: 554    gtgttcgcggc 564
              || ||||||||
Sbjct: 109495 gttttcgcggc 109485



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 63/71 (88%)
 Strand = Plus / Minus

                                                                          
Query: 2      cagattgctttcacgacggttgtgttcccatgtcttcttttgcaatatactggtcaagct 61
              ||||||||||||||   ||||||||||||||| |||||| |||||||||||||||| |||
Sbjct: 110274 cagattgctttcactgtggttgtgttcccatgccttcttctgcaatatactggtcaggct 110215

                         
Query: 62     gcctatatagc 72
              || | ||||||
Sbjct: 110214 gcgtttatagc 110204



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>ref|NM_102850.2| Arabidopsis thaliana KUP10; potassium ion transporter AT1G31120
            (KUP10) mRNA, complete cds
          Length = 3135

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 179/229 (78%)
 Strand = Plus / Plus

                                                                        
Query: 147  ttgcaacggctgctgcaatagtttctagccaggcaactatttccgcaacatactcaatca 206
            ||||||| ||||||||||||||| | ||||| || || || |||||||||| |||  | |
Sbjct: 1797 ttgcaactgctgctgcaatagttgcaagccaagctacaatatccgcaacattctcgttga 1856

                                                                        
Query: 207  tcaagcaagcgcttgcggtgggctgcttccccagagtgaagatcatccatacttccaaga 266
            |||||||||| |||||    || || ||||| ||||| ||  || | |||||||||  ||
Sbjct: 1857 tcaagcaagctcttgctcatggatgtttcccgagagttaaagtcgtgcatacttcccgga 1916

                                                                        
Query: 267  agtatcttggccagatatacagccccgatattaattggatcctcctgattctctgtattg 326
            | |  ||||| ||||| |||   || || || |||||||||||| |||| || || || |
Sbjct: 1917 aattccttggtcagatttacgttccagacatcaattggatcctcatgatcctttgcatag 1976

                                                             
Query: 327  ccgtcacggctgggttcaagaatcagtcccagattgcaaatgcttatgg 375
            | ||||| ||||| |||||||| |||  |||||| | ||||||||||||
Sbjct: 1977 ctgtcactgctggattcaagaaccagaaccagataggaaatgcttatgg 2025



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>gb|AC004793.2|F28K20 Arabidopsis thaliana chromosome 1 BAC F28K20 sequence, complete
             sequence
          Length = 76458

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 179/229 (78%)
 Strand = Plus / Minus

                                                                         
Query: 147   ttgcaacggctgctgcaatagtttctagccaggcaactatttccgcaacatactcaatca 206
             ||||||| ||||||||||||||| | ||||| || || || |||||||||| |||  | |
Sbjct: 16778 ttgcaactgctgctgcaatagttgcaagccaagctacaatatccgcaacattctcgttga 16719

                                                                         
Query: 207   tcaagcaagcgcttgcggtgggctgcttccccagagtgaagatcatccatacttccaaga 266
             |||||||||| |||||    || || ||||| ||||| ||  || | |||||||||  ||
Sbjct: 16718 tcaagcaagctcttgctcatggatgtttcccgagagttaaagtcgtgcatacttcccgga 16659

                                                                         
Query: 267   agtatcttggccagatatacagccccgatattaattggatcctcctgattctctgtattg 326
             | |  ||||| ||||| |||   || || || |||||||||||| |||| || || || |
Sbjct: 16658 aattccttggtcagatttacgttccagacatcaattggatcctcatgatcctttgcatag 16599

                                                              
Query: 327   ccgtcacggctgggttcaagaatcagtcccagattgcaaatgcttatgg 375
             | ||||| ||||| |||||||| |||  |||||| | ||||||||||||
Sbjct: 16598 ctgtcactgctggattcaagaaccagaaccagataggaaatgcttatgg 16550



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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                                  
Query: 392     gttatgcttgtgacgacatttctcatgatccccataatgctgctggtatgg 442
               |||||||| || ||||||||||||||| |||| ||||||||| | ||||||
Sbjct: 6203790 gttatgctggtcacgacatttctcatggtcccaataatgctgttagtatgg 6203840



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>dbj|AP003875.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1119_C05
          Length = 126112

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                                
Query: 392   gttatgcttgtgacgacatttctcatgatccccataatgctgctggtatgg 442
             |||||||| || ||||||||||||||| |||| ||||||||| | ||||||
Sbjct: 67183 gttatgctggtcacgacatttctcatggtcccaataatgctgttagtatgg 67233



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>emb|AJ427981.1|OSA427981 Oryza sativa HAK12 gene for putative potasium transporter, exons 1-9
          Length = 5418

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                               
Query: 392  gttatgcttgtgacgacatttctcatgatccccataatgctgctggtatgg 442
            |||||||| || ||||||||||||||| |||| ||||||||| | ||||||
Sbjct: 3885 gttatgctggtcacgacatttctcatggtcccaataatgctgttagtatgg 3935



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>dbj|AK069377.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012J20, full
            insert sequence
          Length = 3200

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                               
Query: 392  gttatgcttgtgacgacatttctcatgatccccataatgctgctggtatgg 442
            |||||||| || ||||||||||||||| |||| ||||||||| | ||||||
Sbjct: 1915 gttatgctggtcacgacatttctcatggtcccaataatgctgttagtatgg 1965



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>ref|XM_473875.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2217

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 237/308 (76%)
 Strand = Plus / Plus

                                                                        
Query: 131  tggccagcatttgttgttgcaacggctgctgcaatagtttctagccaggcaactatttcc 190
            ||||||||||||||  | ||||| || || ||||||||| | |||||||| || || || 
Sbjct: 925  tggccagcatttgtcatagcaactgcagcagcaatagttgcaagccaggccaccatatct 984

                                                                        
Query: 191  gcaacatactcaatcatcaagcaagcgcttgcggtgggctgcttccccagagtgaagatc 250
            || || ||||| || || |||||||| |||||  | |||||||| ||| | || ||||| 
Sbjct: 985  gcgacttactcgataataaagcaagctcttgcactaggctgctttccccgtgtaaagata 1044

                                                                        
Query: 251  atccatacttccaagaagtatcttggccagatatacagccccgatattaattggatcctc 310
             | || || || ||||| |  ||||| ||||| |||| ||| || || |||||| |||| 
Sbjct: 1045 gtgcacacctcgaagaaattccttgggcagatctacatccctgacatcaattgggtcctt 1104

                                                                        
Query: 311  ctgattctctgtattgccgtcacggctgggttcaagaatcagtcccagattgcaaatgct 370
            || ||||| || ||||| || || ||||| |||||||| ||    ||||| | |||||| 
Sbjct: 1105 ctaattctttgcattgctgtgactgctggattcaagaaccaaagtcagataggaaatgca 1164

                                                                        
Query: 371  tatggtacagctgtgataatggttatgcttgtgacgacatttctcatgatccccataatg 430
            ||||| || || ||| | || |||||||| || || |||||||| ||| | || ||||||
Sbjct: 1165 tatggaactgcggtggttatagttatgctagtcacaacatttctgatggtaccaataatg 1224

                    
Query: 431  ctgctggt 438
             |||||||
Sbjct: 1225 ttgctggt 1232



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>dbj|AK072123.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013122K08, full
            insert sequence
          Length = 3453

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 237/308 (76%)
 Strand = Plus / Plus

                                                                        
Query: 131  tggccagcatttgttgttgcaacggctgctgcaatagtttctagccaggcaactatttcc 190
            ||||||||||||||  | ||||| || || ||||||||| | |||||||| || || || 
Sbjct: 1952 tggccagcatttgtcatagcaactgcagcagcaatagttgcaagccaggccaccatatct 2011

                                                                        
Query: 191  gcaacatactcaatcatcaagcaagcgcttgcggtgggctgcttccccagagtgaagatc 250
            || || ||||| || || |||||||| |||||  | |||||||| ||| | || ||||| 
Sbjct: 2012 gcgacttactcgataataaagcaagctcttgcactaggctgctttccccgtgtaaagata 2071

                                                                        
Query: 251  atccatacttccaagaagtatcttggccagatatacagccccgatattaattggatcctc 310
             | || || || ||||| |  ||||| ||||| |||| ||| || || |||||| |||| 
Sbjct: 2072 gtgcacacctcgaagaaattccttgggcagatctacatccctgacatcaattgggtcctt 2131

                                                                        
Query: 311  ctgattctctgtattgccgtcacggctgggttcaagaatcagtcccagattgcaaatgct 370
            || ||||| || ||||| || || ||||| |||||||| ||    ||||| | |||||| 
Sbjct: 2132 ctaattctttgcattgctgtgactgctggattcaagaaccaaagtcagataggaaatgca 2191

                                                                        
Query: 371  tatggtacagctgtgataatggttatgcttgtgacgacatttctcatgatccccataatg 430
            ||||| || || ||| | || |||||||| || || |||||||| ||| | || ||||||
Sbjct: 2192 tatggaactgcggtggttatagttatgctagtcacaacatttctgatggtaccaataatg 2251

                    
Query: 431  ctgctggt 438
             |||||||
Sbjct: 2252 ttgctggt 2259



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>gb|AC115055.9| Mus musculus chromosome 3, clone RP24-346I12, complete sequence
          Length = 204367

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 127    actttggccagcatttgttgtt 148
              ||||||||||||||||||||||
Sbjct: 103057 actttggccagcatttgttgtt 103036



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>emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070C17,
              complete sequence
          Length = 160484

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 169/218 (77%)
 Strand = Plus / Minus

                                                                          
Query: 131    tggccagcatttgttgttgcaacggctgctgcaatagtttctagccaggcaactatttcc 190
              ||||||||||||||  | ||||| || || ||||||||| | |||||||| || || || 
Sbjct: 146234 tggccagcatttgtcatagcaactgcagcagcaatagttgcaagccaggccaccatatct 146175

                                                                          
Query: 191    gcaacatactcaatcatcaagcaagcgcttgcggtgggctgcttccccagagtgaagatc 250
              || || ||||| || || |||||||| |||||  | |||||||| ||| | || ||||| 
Sbjct: 146174 gcgacttactcgataataaagcaagctcttgcactaggctgctttccccgtgtaaagata 146115

                                                                          
Query: 251    atccatacttccaagaagtatcttggccagatatacagccccgatattaattggatcctc 310
               | || || || ||||| |  ||||| ||||| |||| ||| || || |||||| |||| 
Sbjct: 146114 gtgcacacctcgaagaaattccttgggcagatctacatccctgacatcaattgggtcctt 146055

                                                    
Query: 311    ctgattctctgtattgccgtcacggctgggttcaagaa 348
              || ||||| || ||||| || || ||||| ||||||||
Sbjct: 146054 ctaattctttgcattgctgtgactgctggattcaagaa 146017



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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 169/218 (77%)
 Strand = Plus / Minus

                                                                            
Query: 131      tggccagcatttgttgttgcaacggctgctgcaatagtttctagccaggcaactatttcc 190
                ||||||||||||||  | ||||| || || ||||||||| | |||||||| || || || 
Sbjct: 31164153 tggccagcatttgtcatagcaactgcagcagcaatagttgcaagccaggccaccatatct 31164094

                                                                            
Query: 191      gcaacatactcaatcatcaagcaagcgcttgcggtgggctgcttccccagagtgaagatc 250
                || || ||||| || || |||||||| |||||  | |||||||| ||| | || ||||| 
Sbjct: 31164093 gcgacttactcgataataaagcaagctcttgcactaggctgctttccccgtgtaaagata 31164034

                                                                            
Query: 251      atccatacttccaagaagtatcttggccagatatacagccccgatattaattggatcctc 310
                 | || || || ||||| |  ||||| ||||| |||| ||| || || |||||| |||| 
Sbjct: 31164033 gtgcacacctcgaagaaattccttgggcagatctacatccctgacatcaattgggtcctt 31163974

                                                      
Query: 311      ctgattctctgtattgccgtcacggctgggttcaagaa 348
                || ||||| || ||||| || || ||||| ||||||||
Sbjct: 31163973 ctaattctttgcattgctgtgactgctggattcaagaa 31163936



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>dbj|AK174627.1| Ciona intestinalis cDNA, clone:cigd044o11, full insert sequence
          Length = 803

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 124 tatactttggccagcatttgtt 145
           ||||||||||||||||||||||
Sbjct: 589 tatactttggccagcatttgtt 610



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>emb|AJ427980.1|OSA427980 Oryza sativa HAK11 gene for putative potasium transporter, exons 1-9
          Length = 4562

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 169/218 (77%)
 Strand = Plus / Plus

                                                                        
Query: 131  tggccagcatttgttgttgcaacggctgctgcaatagtttctagccaggcaactatttcc 190
            ||||||||||||||  | ||||| || || ||||||||| | |||||||| || || || 
Sbjct: 2360 tggccagcatttgtcatagcaactgcagcagcaatagttgcaagccaggccaccatatct 2419

                                                                        
Query: 191  gcaacatactcaatcatcaagcaagcgcttgcggtgggctgcttccccagagtgaagatc 250
            || || ||||| || || |||||||| |||||  | |||||||| ||| | || ||||| 
Sbjct: 2420 gcgacttactcgataataaagcaagctcttgcactaggctgctttccccgtgtaaagata 2479

                                                                        
Query: 251  atccatacttccaagaagtatcttggccagatatacagccccgatattaattggatcctc 310
             | || || || ||||| |  ||||| ||||| |||| ||| || || |||||| |||| 
Sbjct: 2480 gtgcacacctcgaagaaattccttgggcagatctacatccctgacatcaattgggtcctt 2539

                                                  
Query: 311  ctgattctctgtattgccgtcacggctgggttcaagaa 348
            || ||||| || ||||| || || ||||| ||||||||
Sbjct: 2540 ctaattctttgcattgctgtgactgctggattcaagaa 2577



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>ref|XM_414785.1| PREDICTED: Gallus gallus similar to C330006K01Rik protein
            (LOC416478), mRNA
          Length = 3322

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 468  tcttcacggtgctgtcgctgg 488
            |||||||||||||||||||||
Sbjct: 1100 tcttcacggtgctgtcgctgg 1120



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>emb|Z99128.1|HS422H11 Human DNA sequence from clone RP3-422H11 on chromosome 6p21.1-22.2
             Contains the 3' end of a novel gene, the SRPK1 gene for
             SFRS protein kinase 1 and two CpG islands, complete
             sequence
          Length = 112984

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 32    tgtcttcttttgcaatatact 52
             |||||||||||||||||||||
Sbjct: 96455 tgtcttcttttgcaatatact 96435



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>emb|AL390248.10| Human DNA sequence from clone RP11-492M23 on chromosome 10 Contains
            the gene for a novel protein and a ribosomal protein L21
            (RPL21)(L21) pseudogene, complete sequence
          Length = 125798

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 96   actccttctatttttctcttc 116
            |||||||||||||||||||||
Sbjct: 8917 actccttctatttttctcttc 8937



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>emb|AL356952.18| Human DNA sequence from clone RP11-809M12 on chromosome 10 Contains a
             novel gene and a CpG island, complete sequence
          Length = 129950

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 155   gctgctgcaatagtttctagc 175
             |||||||||||||||||||||
Sbjct: 43112 gctgctgcaatagtttctagc 43132



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>gb|AC119899.8| Mus musculus chromosome 5, clone RP24-235E5, complete sequence
          Length = 210751

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 267   agtatcttggccagatatac 286
             ||||||||||||||||||||
Sbjct: 75024 agtatcttggccagatatac 75043



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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 468     tcttcacggtgctgtcgctggtcg 491
               |||||||||||||| |||||||||
Sbjct: 4129645 tcttcacggtgctggcgctggtcg 4129668



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>gb|AC105773.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1562_H01,
             complete sequence
          Length = 88352

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 28    cccatgtcttcttttgcaat 47
             ||||||||||||||||||||
Sbjct: 27340 cccatgtcttcttttgcaat 27359



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>ref|XM_593387.2| PREDICTED: Bos taurus similar to Cell division cycle protein 20
            homolog (p55CDC), transcript variant 1 (LOC515376), mRNA
          Length = 1839

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 534  agggcggctgggttcctctg 553
            ||||||||||||||||||||
Sbjct: 1288 agggcggctgggttcctctg 1307



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>ref|XM_879895.1| PREDICTED: Bos taurus similar to Cell division cycle protein 20
            homolog (p55CDC), transcript variant 6 (LOC515376), mRNA
          Length = 1637

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 534  agggcggctgggttcctctg 553
            ||||||||||||||||||||
Sbjct: 1086 agggcggctgggttcctctg 1105



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>ref|XM_879869.1| PREDICTED: Bos taurus similar to Cell division cycle protein 20
            homolog (p55CDC), transcript variant 5 (LOC515376), mRNA
          Length = 1679

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 534  agggcggctgggttcctctg 553
            ||||||||||||||||||||
Sbjct: 1128 agggcggctgggttcctctg 1147



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>ref|XM_867229.1| PREDICTED: Bos taurus similar to Cell division cycle protein 20
            homolog (p55CDC), transcript variant 2 (LOC515376), mRNA
          Length = 1683

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 534  agggcggctgggttcctctg 553
            ||||||||||||||||||||
Sbjct: 1132 agggcggctgggttcctctg 1151



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>ref|XM_879821.1| PREDICTED: Bos taurus similar to Cell division cycle protein 20
           homolog (p55CDC), transcript variant 4 (LOC515376), mRNA
          Length = 1175

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 534 agggcggctgggttcctctg 553
           ||||||||||||||||||||
Sbjct: 624 agggcggctgggttcctctg 643



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>emb|BX842583.1| Mycobacterium tuberculosis H37Rv complete genome; segment 12/13
          Length = 349606

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 468    tcttcacggtgctgtcgctggtcg 491
              |||||||||||||| |||||||||
Sbjct: 320214 tcttcacggtgctggcgctggtcg 320237



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>emb|BX248347.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment
            14/14
          Length = 278492

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 468  tcttcacggtgctgtcgctggtcg 491
            |||||||||||||| |||||||||
Sbjct: 7737 tcttcacggtgctggcgctggtcg 7760



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>gb|DQ114786.1| Schistosoma mansoni CREB-binding protein mRNA, complete cds
          Length = 7479

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 144  ttgttgcaacggctgctgcaatag 167
            |||||||||| |||||||||||||
Sbjct: 4591 ttgttgcaaccgctgctgcaatag 4568



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>gb|AC154505.3| Mus musculus BAC clone RP24-92J14 from chromosome 13, complete sequence
          Length = 199707

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 455    gccttggtcctgctcttcac 474
              ||||||||||||||||||||
Sbjct: 123319 gccttggtcctgctcttcac 123338



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 28       cccatgtcttcttttgcaat 47
                ||||||||||||||||||||
Sbjct: 18721937 cccatgtcttcttttgcaat 18721956



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>gb|AC068492.2| Homo sapiens BAC clone RP11-809C23 from 2, complete sequence
          Length = 172281

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 98     tccttctatttttctcttcc 117
              ||||||||||||||||||||
Sbjct: 164784 tccttctatttttctcttcc 164803



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>gb|AC007564.10| Homo sapiens 12 BAC RP11-513P18 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 194397

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 97     ctccttctatttttctcttc 116
              ||||||||||||||||||||
Sbjct: 174136 ctccttctatttttctcttc 174155



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>gb|AC091951.3| Homo sapiens chromosome 5 clone RP11-404K5, complete sequence
          Length = 160174

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 125   atactttggccagcatttgt 144
             ||||||||||||||||||||
Sbjct: 14772 atactttggccagcatttgt 14791



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>dbj|AP003126.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-684F2, complete
              sequence
          Length = 183583

 Score = 40.1 bits (20), Expect = 7.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 299    aattggatcctcctgattct 318
              ||||||||||||||||||||
Sbjct: 179131 aattggatcctcctgattct 179112


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,152,924
Number of Sequences: 3902068
Number of extensions: 5152924
Number of successful extensions: 94728
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 94513
Number of HSP's gapped (non-prelim): 212
length of query: 564
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 541
effective length of database: 17,143,297,704
effective search space: 9274524057864
effective search space used: 9274524057864
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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