ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd24a09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK109015.1| Oryza sativa (japonica cultivar-group) cDNA clon... 341 2e-90
2dbj|AK072362.1| Oryza sativa (japonica cultivar-group) cDNA clon... 341 2e-90
3dbj|AK064226.1| Oryza sativa (japonica cultivar-group) cDNA clon... 341 2e-90
4gb|AY108044.1| Zea mays PCO134708 mRNA sequence 222 1e-54
5dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 180 3e-42
6dbj|AP004079.2| Oryza sativa (japonica cultivar-group) genomic D... 180 3e-42
7dbj|AP005874.3| Oryza sativa (japonica cultivar-group) genomic D... 180 3e-42
8emb|CR925725.10| Zebrafish DNA sequence from clone DKEYP-1D6 in ... 44 0.50
9gb|AF223462.1|AF223462 Synechococcus PCC7918 CpcB (cpcB) and Cpc... 44 0.50
10gb|AF223443.1|AF223443 Synechococcus sp. PS681 CpcB (cpcB) and C... 44 0.50
11gb|AC144736.2| Oryza sativa (japonica cultivar-group) chromosome... 42 2.0
12ref|XM_753397.1| Ustilago maydis 521 hypothetical protein (UM023... 42 2.0
13gb|AC019043.8| Homo sapiens BAC clone RP11-11B21 from 7, complet... 42 2.0
14emb|CR643565.2|CNS0EVJN Tetraodon nigroviridis full-length cDNA 42 2.0
15emb|CR635850.1|CNS0EPLC Tetraodon nigroviridis full-length cDNA 42 2.0
16gb|AF223465.1|AF223465 Synechococcus PCC9005 CpcB (cpcB) and Cpc... 42 2.0
17gb|AF223455.1|AF223455 Synechococcus sp. PS685 CpcB (cpcB) and C... 42 2.0
18gb|AF223428.1|AF223428 Synechococcus sp. PS680 CpcB (cpcB) and C... 42 2.0
19dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
20gb|U76895.1|TAU76895 Triticum aestivum beta-tubulin 4 (Tubb4) mR... 42 2.0
21gb|L27212.1|HSBBICP Bovine herpesvirus type 1 transrepressor pro... 40 7.8
22emb|AJ004801.1|BHV1CGEN Bovine herpesvirus type 1.1 complete genome 40 7.8
23emb|X76943.1|BHVBICP22 Bovine herpesvirus type 1 BICP22 gene 40 7.8
24dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012 40 7.8
25gb|AC016134.7| Homo sapiens chromosome 15 clone RP11-380D11 map ... 40 7.8
26gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 7.8
27dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 40 7.8
28gb|AC140301.3| Mus musculus BAC clone RP23-435M8 from 5, complet... 40 7.8
29dbj|AB209431.1| Homo sapiens mRNA for TYRO3 protein tyrosine kin... 40 7.8 
>dbj|AK109015.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-A06, full
           insert sequence
          Length = 956

 Score =  341 bits (172), Expect = 2e-90
 Identities = 259/287 (90%), Gaps = 1/287 (0%)
 Strand = Plus / Plus

                                                                       
Query: 41  ttcccggcgctgntgcggcagtggccgtcgccgccgctgattccggcgtccacactcctc 100
           |||||||||||| |||||||||||||||||||||||||||| ||||||||||| || |||
Sbjct: 69  ttcccggcgctgatgcggcagtggccgtcgccgccgctgatcccggcgtccacgctgctc 128

                                                                       
Query: 101 cccgtgcccgcaactacccaggnaggacgagctcctcctcgccatggccgagtccgacct 160
           ||||| ||||| || ||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 129 cccgtccccgccaccacccagg-aggacgagctcctcctcgccatggccgagtccgacct 187

                                                                       
Query: 161 cgaagacaagctgaacgcgatccgcaagaccaacagcaacctggtgatcataggcaagcc 220
           ||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||
Sbjct: 188 cgaggacaagctgaacgagatccgcaagaccaacagtaacctggtgatcataggcaagcc 247

                                                                       
Query: 221 caccaacgacgtgaaggaggagtacgacgcggaggtggaagaggacgacgtcgacaacgt 280
            |||  |||||| ||||||||||||||||| ||||  || || ||||||| |||||||||
Sbjct: 248 aaccggcgacgtcaaggaggagtacgacgccgaggccgaggacgacgacgccgacaacgt 307

                                                          
Query: 281 tgacgaatccgacggggacgatttcgaccaagaaaccggctgagccg 327
            || || |||||||| ||||| |||||||| || |||||||||||||
Sbjct: 308 cgaggagtccgacggagacgacttcgaccaggagaccggctgagccg 354
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>dbj|AK072362.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023063B12, full
           insert sequence
          Length = 3594

 Score =  341 bits (172), Expect = 2e-90
 Identities = 259/287 (90%), Gaps = 1/287 (0%)
 Strand = Plus / Plus

                                                                       
Query: 41  ttcccggcgctgntgcggcagtggccgtcgccgccgctgattccggcgtccacactcctc 100
           |||||||||||| |||||||||||||||||||||||||||| ||||||||||| || |||
Sbjct: 127 ttcccggcgctgatgcggcagtggccgtcgccgccgctgatcccggcgtccacgctgctc 186

                                                                       
Query: 101 cccgtgcccgcaactacccaggnaggacgagctcctcctcgccatggccgagtccgacct 160
           ||||| ||||| || ||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 187 cccgtccccgccaccacccagg-aggacgagctcctcctcgccatggccgagtccgacct 245

                                                                       
Query: 161 cgaagacaagctgaacgcgatccgcaagaccaacagcaacctggtgatcataggcaagcc 220
           ||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||
Sbjct: 246 cgaggacaagctgaacgagatccgcaagaccaacagtaacctggtgatcataggcaagcc 305

                                                                       
Query: 221 caccaacgacgtgaaggaggagtacgacgcggaggtggaagaggacgacgtcgacaacgt 280
            |||  |||||| ||||||||||||||||| ||||  || || ||||||| |||||||||
Sbjct: 306 aaccggcgacgtcaaggaggagtacgacgccgaggccgaggacgacgacgccgacaacgt 365

                                                          
Query: 281 tgacgaatccgacggggacgatttcgaccaagaaaccggctgagccg 327
            || || |||||||| ||||| |||||||| || |||||||||||||
Sbjct: 366 cgaggagtccgacggagacgacttcgaccaggagaccggctgagccg 412
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>dbj|AK064226.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-104-G07, full
           insert sequence
          Length = 629

 Score =  341 bits (172), Expect = 2e-90
 Identities = 259/287 (90%), Gaps = 1/287 (0%)
 Strand = Plus / Plus

                                                                       
Query: 41  ttcccggcgctgntgcggcagtggccgtcgccgccgctgattccggcgtccacactcctc 100
           |||||||||||| |||||||||||||||||||||||||||| ||||||||||| || |||
Sbjct: 124 ttcccggcgctgatgcggcagtggccgtcgccgccgctgatcccggcgtccacgctgctc 183

                                                                       
Query: 101 cccgtgcccgcaactacccaggnaggacgagctcctcctcgccatggccgagtccgacct 160
           ||||| ||||| || ||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 184 cccgtccccgccaccacccagg-aggacgagctcctcctcgccatggccgagtccgacct 242

                                                                       
Query: 161 cgaagacaagctgaacgcgatccgcaagaccaacagcaacctggtgatcataggcaagcc 220
           ||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||
Sbjct: 243 cgaggacaagctgaacgagatccgcaagaccaacagtaacctggtgatcataggcaagcc 302

                                                                       
Query: 221 caccaacgacgtgaaggaggagtacgacgcggaggtggaagaggacgacgtcgacaacgt 280
            |||  |||||| ||||||||||||||||| ||||  || || ||||||| |||||||||
Sbjct: 303 aaccggcgacgtcaaggaggagtacgacgccgaggccgaggacgacgacgccgacaacgt 362

                                                          
Query: 281 tgacgaatccgacggggacgatttcgaccaagaaaccggctgagccg 327
            || || |||||||| ||||| |||||||| || |||||||||||||
Sbjct: 363 cgaggagtccgacggagacgacttcgaccaggagaccggctgagccg 409
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>gb|AY108044.1| Zea mays PCO134708 mRNA sequence
          Length = 647

 Score =  222 bits (112), Expect = 1e-54
 Identities = 238/279 (85%), Gaps = 1/279 (0%)
 Strand = Plus / Plus

                                                                       
Query: 41  ttcccggcgctgntgcggcagtggccgtcgccgccgctgattccggcgtccacactcctc 100
           |||||||||||| ||||||||||||| |||||| ||||||| ||||||||||| || |||
Sbjct: 111 ttcccggcgctgatgcggcagtggccatcgccggcgctgatcccggcgtccacgctgctc 170

                                                                       
Query: 101 cccgtgcccgcaactacccaggnaggacgagctcctcctcgccatggccgagtccgacct 160
           |||||||| || ||  |||||| |||||||||| |||||| |||||||||||||||||||
Sbjct: 171 cccgtgccggccacctcccagg-aggacgagcttctcctctccatggccgagtccgacct 229

                                                                       
Query: 161 cgaagacaagctgaacgcgatccgcaagaccaacagcaacctggtgatcataggcaagcc 220
           ||| || |||||||||| |||||| |||||||||||| ||||||| ||||| || |||||
Sbjct: 230 cgaggataagctgaacgagatccggaagaccaacagccacctggttatcatcgggaagcc 289

                                                                       
Query: 221 caccaacgacgtgaaggaggagtacgacgcggaggtggaagaggacgacgtcgacaacgt 280
           |||   ||||   ||||||||||||||||| |||||||| || ||||| |  ||||||||
Sbjct: 290 cacgggcgacaccaaggaggagtacgacgctgaggtggaggacgacgatgcagacaacgt 349

                                                  
Query: 281 tgacgaatccgacggggacgatttcgaccaagaaaccgg 319
            || || || ||||| ||||| |||||||| || |||||
Sbjct: 350 cgaggagtctgacggcgacgacttcgaccaggagaccgg 388
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  180 bits (91), Expect = 3e-42
 Identities = 121/130 (93%), Gaps = 1/130 (0%)
 Strand = Plus / Minus

                                                                            
Query: 41       ttcccggcgctgntgcggcagtggccgtcgccgccgctgattccggcgtccacactcctc 100
                |||||||||||| |||||||||||||||||||||||||||| ||||||||||| || |||
Sbjct: 22995903 ttcccggcgctgatgcggcagtggccgtcgccgccgctgatcccggcgtccacgctgctc 22995844

                                                                            
Query: 101      cccgtgcccgcaactacccaggnaggacgagctcctcctcgccatggccgagtccgacct 160
                ||||| ||||| || ||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 22995843 cccgtccccgccaccacccagg-aggacgagctcctcctcgccatggccgagtccgacct 22995785

                          
Query: 161      cgaagacaag 170
                ||| ||||||
Sbjct: 22995784 cgaggacaag 22995775



 Score =  165 bits (83), Expect = 2e-37
 Identities = 140/159 (88%)
 Strand = Plus / Minus

                                                                            
Query: 169      agctgaacgcgatccgcaagaccaacagcaacctggtgatcataggcaagcccaccaacg 228
                ||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||  ||
Sbjct: 22995657 agctgaacgagatccgcaagaccaacagtaacctggtgatcataggcaagccaaccggcg 22995598

                                                                            
Query: 229      acgtgaaggaggagtacgacgcggaggtggaagaggacgacgtcgacaacgttgacgaat 288
                |||| ||||||||||||||||| ||||  || || ||||||| ||||||||| || || |
Sbjct: 22995597 acgtcaaggaggagtacgacgccgaggccgaggacgacgacgccgacaacgtcgaggagt 22995538

                                                       
Query: 289      ccgacggggacgatttcgaccaagaaaccggctgagccg 327
                ||||||| ||||| |||||||| || |||||||||||||
Sbjct: 22995537 ccgacggagacgacttcgaccaggagaccggctgagccg 22995499
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>dbj|AP004079.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1067_B01
          Length = 100525

 Score =  180 bits (91), Expect = 3e-42
 Identities = 121/130 (93%), Gaps = 1/130 (0%)
 Strand = Plus / Minus

                                                                         
Query: 41    ttcccggcgctgntgcggcagtggccgtcgccgccgctgattccggcgtccacactcctc 100
             |||||||||||| |||||||||||||||||||||||||||| ||||||||||| || |||
Sbjct: 20300 ttcccggcgctgatgcggcagtggccgtcgccgccgctgatcccggcgtccacgctgctc 20241

                                                                         
Query: 101   cccgtgcccgcaactacccaggnaggacgagctcctcctcgccatggccgagtccgacct 160
             ||||| ||||| || ||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 20240 cccgtccccgccaccacccagg-aggacgagctcctcctcgccatggccgagtccgacct 20182

                       
Query: 161   cgaagacaag 170
             ||| ||||||
Sbjct: 20181 cgaggacaag 20172



 Score =  165 bits (83), Expect = 2e-37
 Identities = 140/159 (88%)
 Strand = Plus / Minus

                                                                         
Query: 169   agctgaacgcgatccgcaagaccaacagcaacctggtgatcataggcaagcccaccaacg 228
             ||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||  ||
Sbjct: 20054 agctgaacgagatccgcaagaccaacagtaacctggtgatcataggcaagccaaccggcg 19995

                                                                         
Query: 229   acgtgaaggaggagtacgacgcggaggtggaagaggacgacgtcgacaacgttgacgaat 288
             |||| ||||||||||||||||| ||||  || || ||||||| ||||||||| || || |
Sbjct: 19994 acgtcaaggaggagtacgacgccgaggccgaggacgacgacgccgacaacgtcgaggagt 19935

                                                    
Query: 289   ccgacggggacgatttcgaccaagaaaccggctgagccg 327
             ||||||| ||||| |||||||| || |||||||||||||
Sbjct: 19934 ccgacggagacgacttcgaccaggagaccggctgagccg 19896
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>dbj|AP005874.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0016G10
          Length = 143211

 Score =  180 bits (91), Expect = 3e-42
 Identities = 121/130 (93%), Gaps = 1/130 (0%)
 Strand = Plus / Minus

                                                                          
Query: 41     ttcccggcgctgntgcggcagtggccgtcgccgccgctgattccggcgtccacactcctc 100
              |||||||||||| |||||||||||||||||||||||||||| ||||||||||| || |||
Sbjct: 115705 ttcccggcgctgatgcggcagtggccgtcgccgccgctgatcccggcgtccacgctgctc 115646

                                                                          
Query: 101    cccgtgcccgcaactacccaggnaggacgagctcctcctcgccatggccgagtccgacct 160
              ||||| ||||| || ||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 115645 cccgtccccgccaccacccagg-aggacgagctcctcctcgccatggccgagtccgacct 115587

                        
Query: 161    cgaagacaag 170
              ||| ||||||
Sbjct: 115586 cgaggacaag 115577



 Score =  165 bits (83), Expect = 2e-37
 Identities = 140/159 (88%)
 Strand = Plus / Minus

                                                                          
Query: 169    agctgaacgcgatccgcaagaccaacagcaacctggtgatcataggcaagcccaccaacg 228
              ||||||||| |||||||||||||||||| ||||||||||||||||||||||| |||  ||
Sbjct: 115459 agctgaacgagatccgcaagaccaacagtaacctggtgatcataggcaagccaaccggcg 115400

                                                                          
Query: 229    acgtgaaggaggagtacgacgcggaggtggaagaggacgacgtcgacaacgttgacgaat 288
              |||| ||||||||||||||||| ||||  || || ||||||| ||||||||| || || |
Sbjct: 115399 acgtcaaggaggagtacgacgccgaggccgaggacgacgacgccgacaacgtcgaggagt 115340

                                                     
Query: 289    ccgacggggacgatttcgaccaagaaaccggctgagccg 327
              ||||||| ||||| |||||||| || |||||||||||||
Sbjct: 115339 ccgacggagacgacttcgaccaggagaccggctgagccg 115301
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>emb|CR925725.10| Zebrafish DNA sequence from clone DKEYP-1D6 in linkage group 10,
             complete sequence
          Length = 171074

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 178   cgatccgcaagaccaacagcaa 199
             ||||||||||||||||||||||
Sbjct: 76766 cgatccgcaagaccaacagcaa 76745
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>gb|AF223462.1|AF223462 Synechococcus PCC7918 CpcB (cpcB) and CpcA (cpcA) genes, partial
           cds
          Length = 465

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 63  ggccgtcgccgccgctgattcc 84
           ||||||||||||||||||||||
Sbjct: 331 ggccgtcgccgccgctgattcc 352
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>gb|AF223443.1|AF223443 Synechococcus sp. PS681 CpcB (cpcB) and CpcA (cpcA) genes, partial
           cds
          Length = 470

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 63  ggccgtcgccgccgctgattcc 84
           ||||||||||||||||||||||
Sbjct: 300 ggccgtcgccgccgctgattcc 321
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>gb|AC144736.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone
              OSJNBa0008E07, complete sequence
          Length = 146679

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 64     gccgtcgccgccgctgattcc 84
              |||||||||||||||||||||
Sbjct: 103849 gccgtcgccgccgctgattcc 103829
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>ref|XM_753397.1| Ustilago maydis 521 hypothetical protein (UM02343.1) partial mRNA
          Length = 2229

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 251  ggaggtggaagaggacgacgtcgac 275
            |||||||||||||||||||| ||||
Sbjct: 2190 ggaggtggaagaggacgacgacgac 2214
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>gb|AC019043.8| Homo sapiens BAC clone RP11-11B21 from 7, complete sequence
          Length = 211680

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 325    ccgtccggctcccccaggctc 345
              |||||||||||||||||||||
Sbjct: 198533 ccgtccggctcccccaggctc 198553
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>emb|CR643565.2|CNS0EVJN Tetraodon nigroviridis full-length cDNA
          Length = 1279

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 167 caagctgaacgcgatccgcaa 187
           |||||||||||||||||||||
Sbjct: 262 caagctgaacgcgatccgcaa 282
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>emb|CR635850.1|CNS0EPLC Tetraodon nigroviridis full-length cDNA
          Length = 1276

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 167 caagctgaacgcgatccgcaa 187
           |||||||||||||||||||||
Sbjct: 268 caagctgaacgcgatccgcaa 288
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>gb|AF223465.1|AF223465 Synechococcus PCC9005 CpcB (cpcB) and CpcA (cpcA) genes, partial
           cds
          Length = 468

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 64  gccgtcgccgccgctgattcc 84
           |||||||||||||||||||||
Sbjct: 341 gccgtcgccgccgctgattcc 361
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>gb|AF223455.1|AF223455 Synechococcus sp. PS685 CpcB (cpcB) and CpcA (cpcA) genes, partial
           cds
          Length = 402

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 64  gccgtcgccgccgctgattcc 84
           |||||||||||||||||||||
Sbjct: 293 gccgtcgccgccgctgattcc 313
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>gb|AF223428.1|AF223428 Synechococcus sp. PS680 CpcB (cpcB) and CpcA (cpcA) genes, partial
           cds
          Length = 514

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 64  gccgtcgccgccgctgattcc 84
           |||||||||||||||||||||
Sbjct: 339 gccgtcgccgccgctgattcc 359
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 64       gccgtcgccgccgctgattcc 84
                |||||||||||||||||||||
Sbjct: 12336371 gccgtcgccgccgctgattcc 12336351
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>gb|U76895.1|TAU76895 Triticum aestivum beta-tubulin 4 (Tubb4) mRNA, complete cds
          Length = 1866

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 237  gaggagtacgacgcggaggtggaagagga 265
            ||||||||||||| ||||| |||||||||
Sbjct: 1381 gaggagtacgacgaggaggaggaagagga 1409
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>gb|L27212.1|HSBBICP Bovine herpesvirus type 1 transrepressor protein (BICP22) gene,
            complete cds
          Length = 3210

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 244  acgacgcggaggtggaagaggacg 267
            |||||| |||||||||||||||||
Sbjct: 2392 acgacgaggaggtggaagaggacg 2369
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>emb|AJ004801.1|BHV1CGEN Bovine herpesvirus type 1.1 complete genome
          Length = 135301

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 244    acgacgcggaggtggaagaggacg 267
              |||||| |||||||||||||||||
Sbjct: 124802 acgacgaggaggtggaagaggacg 124825



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 244    acgacgcggaggtggaagaggacg 267
              |||||| |||||||||||||||||
Sbjct: 113416 acgacgaggaggtggaagaggacg 113393
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>emb|X76943.1|BHVBICP22 Bovine herpesvirus type 1 BICP22 gene
          Length = 3210

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 244  acgacgcggaggtggaagaggacg 267
            |||||| |||||||||||||||||
Sbjct: 2392 acgacgaggaggtggaagaggacg 2369
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>dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012
          Length = 2668010

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 366     ttctgcaaagcaatctgtac 385
               ||||||||||||||||||||
Sbjct: 1215468 ttctgcaaagcaatctgtac 1215487
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>gb|AC016134.7| Homo sapiens chromosome 15 clone RP11-380D11 map 15q14, complete
             sequence
          Length = 170695

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 64    gccgtcgccgccgctgattc 83
             ||||||||||||||||||||
Sbjct: 54790 gccgtcgccgccgctgattc 54771
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 170     gctgaacgcgatccgcaaga 189
               ||||||||||||||||||||
Sbjct: 1452314 gctgaacgcgatccgcaaga 1452333
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>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 277     acgttgacgaatccgacggg 296
               ||||||||||||||||||||
Sbjct: 2532838 acgttgacgaatccgacggg 2532819
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>gb|AC140301.3| Mus musculus BAC clone RP23-435M8 from 5, complete sequence
          Length = 197633

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 442    caagctatcatactttactttgct 465
              |||||||||||||| |||||||||
Sbjct: 112042 caagctatcatactctactttgct 112065
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>dbj|AB209431.1| Homo sapiens mRNA for TYRO3 protein tyrosine kinase variant
          protein
          Length = 3059

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 64 gccgtcgccgccgctgattc 83
          ||||||||||||||||||||
Sbjct: 20 gccgtcgccgccgctgattc 1


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,609,410
Number of Sequences: 3902068
Number of extensions: 3609410
Number of successful extensions: 66428
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 66128
Number of HSP's gapped (non-prelim): 292
length of query: 573
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 550
effective length of database: 17,143,297,704
effective search space: 9428813737200
effective search space used: 9428813737200
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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