ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd23l06 |
|---|---|
| Clone Library Name | barley_pub |
>C74A2_ORYSA (Q7XYS3) Cytochrome P450 74A2 (EC 4.2.1.92) (Allene oxide synthase| 2) (Hydroperoxide dehydrase 2) Length = 478 Score = 154 bits (389), Expect = 2e-37 Identities = 76/115 (66%), Positives = 85/115 (73%) Frame = +2 Query: 14 AVKKGEMLFGYQPCATKDPRVFGPTAREFVGDRFVGKEGSKLLKYVYWSNGRETESPSVH 193 A+KKGEMLFGYQPCAT+DPRVFG TAREFVGDRFVG+EG KLL+YVYWSNGRETE+PSV Sbjct: 366 AIKKGEMLFGYQPCATRDPRVFGATAREFVGDRFVGEEGRKLLQYVYWSNGRETENPSVD 425 Query: 194 NKQCPGKNXXXXXXXXXXXXXXXRYDTFTAKVGLDLLGTKVEFTGVTKATSGVAD 358 NKQCPGKN RYDTFTA+ G KV TGVTKA++ + Sbjct: 426 NKQCPGKNLVVLVGRLLLVELFLRYDTFTAEA-----GKKVVITGVTKASTSAVN 475
>CP74A_ARATH (Q96242) Cytochrome P450 74A, chloroplast precursor (EC 4.2.1.92)| (Allene oxide synthase) (Hydroperoxide dehydrase) Length = 518 Score = 112 bits (281), Expect = 7e-25 Identities = 56/109 (51%), Positives = 73/109 (66%) Frame = +2 Query: 17 VKKGEMLFGYQPCATKDPRVFGPTAREFVGDRFVGKEGSKLLKYVYWSNGRETESPSVHN 196 VK GEML+GYQP AT+DP++F A EFV +RFVG+EG KLL++V WSNG ETE+P+V N Sbjct: 410 VKAGEMLYGYQPLATRDPKIFD-RADEFVPERFVGEEGEKLLRHVLWSNGPETETPTVGN 468 Query: 197 KQCPGKNXXXXXXXXXXXXXXXRYDTFTAKVGLDLLGTKVEFTGVTKAT 343 KQC GK+ RYD+F +VG LG+ V F+ + KA+ Sbjct: 469 KQCAGKDFVVLVARLFVIEIFRRYDSFDIEVGTSPLGSSVNFSSLRKAS 517
>C74A1_ORYSA (Q7Y0C8) Cytochrome P450 74A1, chloroplast precursor (EC 4.2.1.92)| (Allene oxide synthase 1) (Hydroperoxide dehydrase 1) Length = 512 Score = 112 bits (280), Expect = 9e-25 Identities = 54/109 (49%), Positives = 73/109 (66%) Frame = +2 Query: 17 VKKGEMLFGYQPCATKDPRVFGPTAREFVGDRFVGKEGSKLLKYVYWSNGRETESPSVHN 196 V++GEMLFGYQP ATKDPRVF E+V DRF+G++G++LL++V WSNG ET +P++H+ Sbjct: 404 VREGEMLFGYQPMATKDPRVFA-RPEEYVPDRFLGEDGARLLRHVVWSNGPETAAPTLHD 462 Query: 197 KQCPGKNXXXXXXXXXXXXXXXRYDTFTAKVGLDLLGTKVEFTGVTKAT 343 KQC GK+ RYD+F +VG LG+ V T + KAT Sbjct: 463 KQCAGKDFVVLVARLLLVELFLRYDSFDVEVGTSTLGSSVTVTSLKKAT 511
>CP74_LINUS (P48417) Cytochrome P450 74A, chloroplast precursor (EC 4.2.1.92)| (Allene oxide synthase) (Hydroperoxide dehydrase) Length = 536 Score = 110 bits (276), Expect = 2e-24 Identities = 57/109 (52%), Positives = 70/109 (64%) Frame = +2 Query: 17 VKKGEMLFGYQPCATKDPRVFGPTAREFVGDRFVGKEGSKLLKYVYWSNGRETESPSVHN 196 VK+GEMLFGYQP ATKDP++F EFV DRFVG EG KL++YV WSNG ETE+PSV N Sbjct: 429 VKEGEMLFGYQPFATKDPKIFD-RPEEFVADRFVG-EGVKLMEYVMWSNGPETETPSVAN 486 Query: 197 KQCPGKNXXXXXXXXXXXXXXXRYDTFTAKVGLDLLGTKVEFTGVTKAT 343 KQC GK+ RYD+F +VG LG + T + ++T Sbjct: 487 KQCAGKDFVVMAARLFVVELFKRYDSFDIEVGTSSLGASITLTSLKRST 535
>C74A2_PARAR (Q40778) Cytochrome P450 74A2 (EC 4.2.1.92) (Allene oxide synthase)| (Rubber particle protein) (RPP) Length = 473 Score = 109 bits (273), Expect = 6e-24 Identities = 60/112 (53%), Positives = 71/112 (63%) Frame = +2 Query: 8 TRAVKKGEMLFGYQPCATKDPRVFGPTAREFVGDRFVGKEGSKLLKYVYWSNGRETESPS 187 T VKKGEMLFGYQP ATKDP+VF EFV DRFVG +G LLKYV+WSNG ETESP+ Sbjct: 363 TFEVKKGEMLFGYQPFATKDPKVFD-RPEEFVPDRFVG-DGEALLKYVWWSNGPETESPT 420 Query: 188 VHNKQCPGKNXXXXXXXXXXXXXXXRYDTFTAKVGLDLLGTKVEFTGVTKAT 343 V NKQC GK+ RYD+F ++G LG V T + +A+ Sbjct: 421 VENKQCAGKDFVVLITRLFVIELFRRYDSFEIELGESPLGAAVTLTFLKRAS 472
>C74A3_ORYSA (Q6Z6L1) Cytochrome P450 74A3 (EC 4.2.1.92) (Allene oxide synthase| 3) (Hydroperoxide dehydrase 3) Length = 500 Score = 99.4 bits (246), Expect = 7e-21 Identities = 58/114 (50%), Positives = 70/114 (61%), Gaps = 3/114 (2%) Frame = +2 Query: 17 VKKGEMLFGYQPCATKDPRVFGPTAREFVGDRFV--GKEGSK-LLKYVYWSNGRETESPS 187 V+KGEMLFGYQP AT+D +VF A EFV DRFV G G + LL++V WSNG ET +PS Sbjct: 388 VRKGEMLFGYQPLATRDEKVFD-RAGEFVADRFVAGGAAGDRPLLEHVVWSNGPETRAPS 446 Query: 188 VHNKQCPGKNXXXXXXXXXXXXXXXRYDTFTAKVGLDLLGTKVEFTGVTKATSG 349 NKQCPGK+ RYDTF A V + V FT +T+A+SG Sbjct: 447 EGNKQCPGKDMVVAVGRLMVAELFRRYDTFAADVVEAPVEPVVTFTSLTRASSG 500
>C74A4_ORYSA (Q6Z6K9) Cytochrome P450 74A4 (EC 4.2.1.92) (Allene oxide synthase| 4) (Hydroperoxide dehydrase 4) Length = 510 Score = 97.4 bits (241), Expect = 3e-20 Identities = 57/114 (50%), Positives = 67/114 (58%), Gaps = 3/114 (2%) Frame = +2 Query: 17 VKKGEMLFGYQPCATKDPRVFGPTAREFVGDRFVGKEGSK---LLKYVYWSNGRETESPS 187 V+KGE+LFGYQP AT+D +VF A EFV DRFV GS LL++V WSNG ET +PS Sbjct: 390 VRKGELLFGYQPLATRDEKVFD-RAGEFVPDRFVSGAGSAARPLLEHVVWSNGPETGTPS 448 Query: 188 VHNKQCPGKNXXXXXXXXXXXXXXXRYDTFTAKVGLDLLGTKVEFTGVTKATSG 349 NKQCPGK+ RYDTF A V L V FT +T+A G Sbjct: 449 EGNKQCPGKDMVVAVGRLMVAGLFRRYDTFAADVEELPLEPVVTFTSLTRAADG 502
>YHR1_HCMVA (P09702) Hypothetical protein HHRF1| Length = 156 Score = 31.6 bits (70), Expect = 1.9 Identities = 24/63 (38%), Positives = 29/63 (46%) Frame = +1 Query: 283 QSRPRPSRHQG*VHRRHQGNVRCGRRCLNPSPDGHR*QRDQRRAATILTPSSRTYVRASL 462 +S RPS G + Q VR R P+ D +R RD R A T P+S R SL Sbjct: 64 RSENRPSVRTG---AQKQPAVRATERFTAPAADSYR--RDVRAAGTSALPASPPRARPSL 118 Query: 463 YLP 471 Y P Sbjct: 119 YSP 121
>GCSP_MYCTU (Q50601) Probable glycine dehydrogenase [decarboxylating] (EC| 1.4.4.2) (Glycine decarboxylase) (Glycine cleavage system P-protein) Length = 941 Score = 31.2 bits (69), Expect = 2.5 Identities = 15/27 (55%), Positives = 16/27 (59%) Frame = -2 Query: 169 PPVRPVHVLQQLAPLLPDEPVADELPR 89 P V PV V LAP LP P A ELP+ Sbjct: 703 PGVGPVAVRAHLAPFLPGHPFAPELPK 729
>GCSP_MYCBO (Q7VET8) Glycine dehydrogenase [decarboxylating] (EC 1.4.4.2)| (Glycine decarboxylase) (Glycine cleavage system P-protein) Length = 941 Score = 31.2 bits (69), Expect = 2.5 Identities = 15/27 (55%), Positives = 16/27 (59%) Frame = -2 Query: 169 PPVRPVHVLQQLAPLLPDEPVADELPR 89 P V PV V LAP LP P A ELP+ Sbjct: 703 PGVGPVAVRAHLAPFLPGHPFAPELPK 729
>BLI4_CAEEL (P51559) Endoprotease bli-4 precursor (EC 3.4.21.-) (Blisterase)| (Blistered cuticle protein 4) Length = 943 Score = 30.8 bits (68), Expect = 3.3 Identities = 13/41 (31%), Positives = 18/41 (43%) Frame = -1 Query: 596 YYTGQDCQK*TQHTHTYTRAQCCEATEQDACTCMTDSYVHY 474 Y G C+ + H HT T+A+ CE D+ HY Sbjct: 722 YLDGDKCKMCSSHCHTCTKAEVCETCPGSLLLIDVDNMPHY 762
>GP124_HUMAN (Q96PE1) Probable G-protein coupled receptor 124 precursor (Tumor| endothelial marker 5) Length = 1331 Score = 30.8 bits (68), Expect = 3.3 Identities = 14/37 (37%), Positives = 18/37 (48%) Frame = +1 Query: 280 GQSRPRPSRHQG*VHRRHQGNVRCGRRCLNPSPDGHR 390 G+ P P+ +G + RH NV GRR GHR Sbjct: 1148 GEGEPEPAGTRGNLAHRHPNNVHHGRRAHKSRAKGHR 1184
>VPS72_YEAST (Q03388) Vacuolar protein sorting protein 72 (SWR complex protein| 2) Length = 795 Score = 30.4 bits (67), Expect = 4.2 Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 3/56 (5%) Frame = -3 Query: 189 TLGLSVS-RPFDQYTYFSSLLPSFPTNR--SPTNSLAVGPNTRGSFVAHGWYPNSI 31 T GLS + RP D T F S+LPS P + SPT +++ + +F + G Y I Sbjct: 621 TNGLSATQRPQDMKTVFHSILPSPPQSSVPSPTVDISLDLSALANFPSFGEYDKKI 676
>GCSP_MYCPA (Q73ZQ6) Glycine dehydrogenase [decarboxylating] (EC 1.4.4.2)| (Glycine decarboxylase) (Glycine cleavage system P-protein) Length = 941 Score = 30.4 bits (67), Expect = 4.2 Identities = 15/27 (55%), Positives = 16/27 (59%) Frame = -2 Query: 169 PPVRPVHVLQQLAPLLPDEPVADELPR 89 P V PV V LAP LP P A ELP+ Sbjct: 703 PGVGPVAVRSHLAPFLPGHPHAPELPQ 729
>DAN4_YEAST (P47179) Cell wall protein DAN4 precursor| Length = 1161 Score = 29.6 bits (65), Expect = 7.2 Identities = 19/114 (16%), Positives = 32/114 (28%) Frame = +3 Query: 153 TGRTGGRPRAPACTTSSAQARTXXXXXXXXXXXXXXXXTTPSRPKSASTFXXXXXXXXXX 332 T T P T+S + T P+ ++STF Sbjct: 251 TSSTSTTPTTSTTPTTSTTSTAPTTSTTSTTSTTSTISTAPTTSTTSSTFSTSSASASSV 310 Query: 333 XXXXXVWQTLFKSFTGRPSVTKGSTQGSNDPYTVITYVRTCLAISTLVVYVRVS 494 T F S T + T + ++ T + + +T Y+ S Sbjct: 311 ISTTATTSTTFASLTTPATSTASTDHTTSSVSTTNAFTTSATTTTTSDTYISSS 364
>CP7B1_HUMAN (O75881) Cytochrome P450 7B1 (EC 1.14.13.100)| (25-hydroxycholesterol 7-alpha-hydroxylase) (Oxysterol 7-alpha-hydroxylase) Length = 506 Score = 29.3 bits (64), Expect = 9.5 Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 4/74 (5%) Frame = +2 Query: 5 GTRAVKKGEMLFGYQPCATKDPRVFGPTAREFVGDRFVGKEGSKLLKYVYWSNGRETESP 184 G V+KG+++ + P DP +F EF DRF+ ++G K K ++ G++ + Sbjct: 383 GDYCVRKGDLVAIFPPVLHGDPEIF-EAPEEFRYDRFI-EDGKK--KTTFFKRGKKLKCY 438 Query: 185 ----SVHNKQCPGK 214 +CPG+ Sbjct: 439 LMPFGTGTSKCPGR 452
>SWR1_CANGA (Q6FK48) Helicase SWR1 (EC 3.6.1.-)| Length = 1450 Score = 29.3 bits (64), Expect = 9.5 Identities = 14/46 (30%), Positives = 23/46 (50%) Frame = -2 Query: 388 DGRPVKDLNSVCHTGRCLGDAGELNLGAEKVEADFGREGVVPEEQL 251 DGR + +V G + GEL LG ++ + G++P E+L Sbjct: 1104 DGRTTIEKFAVLTPGAVTSNIGELTLGMDEFVTPNSKSGIIPYEEL 1149
>KARG2_CAEEL (Q27535) Probable arginine kinase ZC434.8 (EC 2.7.3.3) (AK)| Length = 360 Score = 29.3 bits (64), Expect = 9.5 Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 4/32 (12%) Frame = +2 Query: 86 TAREFVGDRFVGKEGSKLLKYV----YWSNGR 169 T ++ + D F+ KEG + LK YW NGR Sbjct: 181 TKKKLIADHFLFKEGDRFLKAANANRYWPNGR 212 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 81,598,763 Number of Sequences: 219361 Number of extensions: 1658062 Number of successful extensions: 4520 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 4354 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4508 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5481822624 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
