ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd23j07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK098851.1| Oryza sativa (japonica cultivar-group) cDNA clon... 363 3e-97
2dbj|AK061747.1| Oryza sativa (japonica cultivar-group) cDNA clon... 363 3e-97
3gb|AC132485.2| Oryza sativa (japonica cultivar-group) chromosome... 172 6e-40
4dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 172 6e-40
5ref|NM_191313.1| Oryza sativa (japonica cultivar-group), predic... 46 0.10
6dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.10
7dbj|AP003409.4| Oryza sativa (japonica cultivar-group) genomic D... 46 0.10
8dbj|AK106853.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.10
9dbj|AP003256.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.10
10ref|NM_202180.1| Arabidopsis thaliana phosphoric diester hydrola... 42 1.6
11ref|NM_102338.2| Arabidopsis thaliana phosphoric diester hydrola... 42 1.6
12gb|AF487271.1| Arabidopsis thaliana tubby-like protein TULP10 (T... 42 1.6
13gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome 42 1.6
14gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome 42 1.6
15gb|BT006290.1| Arabidopsis thaliana At1g25280 mRNA, complete cds 42 1.6
16emb|BX814427.1|CNS0AC2Y Arabidopsis thaliana Full-length cDNA Co... 42 1.6
17emb|BX813359.1|CNS0ABZ8 Arabidopsis thaliana Full-length cDNA Co... 42 1.6
18gb|BT001997.1| Arabidopsis thaliana unknown protein (At1g25280) ... 42 1.6
19gb|AY104059.1| Zea mays PCO082079 mRNA sequence 42 1.6
20emb|CR385071.9| Zebrafish DNA sequence from clone CH211-245B7 in... 42 1.6
21ref|NM_000180.1| Homo sapiens guanylate cyclase 2D, membrane (re... 40 6.2
22gb|AC124576.4| Mus musculus BAC clone RP23-162H6 from chromosome... 40 6.2
23gb|AC129492.6| Homo sapiens chromosome 17, clone RP11-599B13, co... 40 6.2
24gb|AC127172.13| Mus musculus strain C57BL/6J clone rp23-387d2 ma... 40 6.2
25emb|AL136991.26| Human DNA sequence from clone RP11-189J1 on chr... 40 6.2
26ref|XM_961359.1| PREDICTED: Tribolium castaneum similar to CG938... 40 6.2
27gb|AC104581.22| Homo sapiens chromosome 17, clone RP11-1099M24, ... 40 6.2
28gb|AC107913.7| Homo sapiens chromosome 17, clone CTD-3051C7, com... 40 6.2
29gb|AC104762.7| Homo sapiens chromosome 17, clone RP11-769H22, co... 40 6.2
30dbj|AK125534.1| Homo sapiens cDNA FLJ43546 fis, clone PROST2015243 40 6.2
31gb|AY140473.1| Arabidopsis lyrata clone P1WB1-C01-KAR99-14 unkno... 40 6.2
32gb|AY140472.1| Arabidopsis lyrata clone P1WB1-C01-KAR99-11 unkno... 40 6.2
33gb|AY140471.1| Arabidopsis lyrata clone P1WB1-C01-KAR99-4 unknow... 40 6.2
34gb|AY140470.1| Arabidopsis lyrata clone P1WB1-C01-KAR99-3 unknow... 40 6.2
35emb|AL844859.5| Mouse DNA sequence from clone RP23-263O20 on chr... 40 6.2
36emb|AL049875.2|CNS0000O Human chromosome 14 DNA sequence BAC R-1... 40 6.2
37gb|M92432.1|HUMRETGC Homo sapiens retinal guanylyl cyclase (retG... 40 6.2
38emb|AL589878.12| Mouse DNA sequence from clone RP23-351C7 on chr... 40 6.2
39emb|AJ222657.1|HSRSGCG Homo sapiens gene encoding retina-specifi... 40 6.2 
>dbj|AK098851.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000H08, full
           insert sequence
          Length = 1630

 Score =  363 bits (183), Expect = 3e-97
 Identities = 378/443 (85%)
 Strand = Plus / Plus

                                                                       
Query: 2   gcagcctggaccgagggatgcgccgatgcactgcttcatcaggaggaacaaaagcacgtc 61
           |||||||||||| |||||||| |||||||||||||||||||||||||||||||  |  ||
Sbjct: 520 gcagcctggaccaagggatgctccgatgcactgcttcatcaggaggaacaaaaagaactc 579

                                                                       
Query: 62  caccttttatctttatctcagcttaacacaggccctaacagataaagggaagtttttact 121
            ||||| || ||||||||||||||||||||||||||||| |||||||| |||||| | ||
Sbjct: 580 gaccttctacctttatctcagcttaacacaggccctaacggataaaggaaagtttctgct 639

                                                                       
Query: 122 gtctgctcgacgattcagacacggggcacacactgaatatatcatctcgtatgactctga 181
           | |||||||| | |||||| |||||||||| || ||||||||||| || ||||| | |||
Sbjct: 640 ggctgctcgaaggttcagaaacggggcacatacagaatatatcatttcctatgattgtga 699

                                                                       
Query: 182 tgatctatatccaggaagtaattcaggcgttggaaagctgagatcggacttcctggggac 241
           |||||||| ||||||||| |||||    ||||| || |||||||| ||||||||||| ||
Sbjct: 700 tgatctatttccaggaagcaattcgtatgttgggaaactgagatctgacttcctgggtac 759

                                                                       
Query: 242 aaagttcatcatgtacgacaatcagaaaccatacgacggtgccaagtccttgaagagccg 301
           |||||||||||| || || |  |||  ||||||||| ||||| ||| |||    ||||| 
Sbjct: 760 aaagttcatcatctatgatagccagccaccatacgatggtgcaaagccctcacggagcca 819

                                                                       
Query: 302 atcaagtcgtcgctttgcaactaaacaaatcagcccaaacgattcaggcagtaatcttga 361
           ||| ||||||||||||||||  ||||| || | |||||| | ||||||| |||||  |||
Sbjct: 820 atcgagtcgtcgctttgcaagcaaacagattaacccaaatgtttcaggcggtaattatga 879

                                                                       
Query: 362 agttggacaagtgtcatacaggttcaacttcctcaaatcaagagggccgagaagaatgca 421
           |||||||||||||||||||| |||||||||||||||||||||||| || |||||||||||
Sbjct: 880 agttggacaagtgtcatacaagttcaacttcctcaaatcaagaggaccaagaagaatgca 939

                                  
Query: 422 ctgcagtatccagtgccctgtag 444
            |||| |||||||||||| ||||
Sbjct: 940 gtgcaatatccagtgccccgtag 962
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>dbj|AK061747.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-G02, full
            insert sequence
          Length = 1685

 Score =  363 bits (183), Expect = 3e-97
 Identities = 378/443 (85%)
 Strand = Plus / Plus

                                                                        
Query: 2    gcagcctggaccgagggatgcgccgatgcactgcttcatcaggaggaacaaaagcacgtc 61
            |||||||||||| |||||||| |||||||||||||||||||||||||||||||  |  ||
Sbjct: 586  gcagcctggaccaagggatgctccgatgcactgcttcatcaggaggaacaaaaagaactc 645

                                                                        
Query: 62   caccttttatctttatctcagcttaacacaggccctaacagataaagggaagtttttact 121
             ||||| || ||||||||||||||||||||||||||||| |||||||| |||||| | ||
Sbjct: 646  gaccttctacctttatctcagcttaacacaggccctaacggataaaggaaagtttctgct 705

                                                                        
Query: 122  gtctgctcgacgattcagacacggggcacacactgaatatatcatctcgtatgactctga 181
            | |||||||| | |||||| |||||||||| || ||||||||||| || ||||| | |||
Sbjct: 706  ggctgctcgaaggttcagaaacggggcacatacagaatatatcatttcctatgattgtga 765

                                                                        
Query: 182  tgatctatatccaggaagtaattcaggcgttggaaagctgagatcggacttcctggggac 241
            |||||||| ||||||||| |||||    ||||| || |||||||| ||||||||||| ||
Sbjct: 766  tgatctatttccaggaagcaattcgtatgttgggaaactgagatctgacttcctgggtac 825

                                                                        
Query: 242  aaagttcatcatgtacgacaatcagaaaccatacgacggtgccaagtccttgaagagccg 301
            |||||||||||| || || |  |||  ||||||||| ||||| ||| |||    ||||| 
Sbjct: 826  aaagttcatcatctatgatagccagccaccatacgatggtgcaaagccctcacggagcca 885

                                                                        
Query: 302  atcaagtcgtcgctttgcaactaaacaaatcagcccaaacgattcaggcagtaatcttga 361
            ||| ||||||||||||||||  ||||| || | |||||| | ||||||| |||||  |||
Sbjct: 886  atcgagtcgtcgctttgcaagcaaacagattaacccaaatgtttcaggcggtaattatga 945

                                                                        
Query: 362  agttggacaagtgtcatacaggttcaacttcctcaaatcaagagggccgagaagaatgca 421
            |||||||||||||||||||| |||||||||||||||||||||||| || |||||||||||
Sbjct: 946  agttggacaagtgtcatacaagttcaacttcctcaaatcaagaggaccaagaagaatgca 1005

                                   
Query: 422  ctgcagtatccagtgccctgtag 444
             |||| |||||||||||| ||||
Sbjct: 1006 gtgcaatatccagtgccccgtag 1028
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>gb|AC132485.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0022D06,
             complete sequence
          Length = 142068

 Score =  172 bits (87), Expect = 6e-40
 Identities = 189/223 (84%)
 Strand = Plus / Plus

                                                                         
Query: 222   agatcggacttcctggggacaaagttcatcatgtacgacaatcagaaaccatacgacggt 281
             ||||| ||||||||||| |||||||||||||| || || |  |||  ||||||||| |||
Sbjct: 35019 agatctgacttcctgggtacaaagttcatcatctatgatagccagccaccatacgatggt 35078

                                                                         
Query: 282   gccaagtccttgaagagccgatcaagtcgtcgctttgcaactaaacaaatcagcccaaac 341
             || ||| |||    ||||| ||| ||||||||||||||||  ||||| || | |||||| 
Sbjct: 35079 gcaaagccctcacggagccaatcgagtcgtcgctttgcaagcaaacagattaacccaaat 35138

                                                                         
Query: 342   gattcaggcagtaatcttgaagttggacaagtgtcatacaggttcaacttcctcaaatca 401
             | ||||||| |||||  ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 35139 gtttcaggcggtaattatgaagttggacaagtgtcatacaagttcaacttcctcaaatca 35198

                                                        
Query: 402   agagggccgagaagaatgcactgcagtatccagtgccctgtag 444
             ||||| || ||||||||||| |||| |||||||||||| ||||
Sbjct: 35199 agaggaccaagaagaatgcagtgcaatatccagtgccccgtag 35241



 Score =  109 bits (55), Expect = 8e-21
 Identities = 82/91 (90%)
 Strand = Plus / Plus

                                                                         
Query: 3     cagcctggaccgagggatgcgccgatgcactgcttcatcaggaggaacaaaagcacgtcc 62
             ||||||||||| |||||||| |||||||||||||||||||||||||||||||  |  || 
Sbjct: 32751 cagcctggaccaagggatgctccgatgcactgcttcatcaggaggaacaaaaagaactcg 32810

                                            
Query: 63    accttttatctttatctcagcttaacacagg 93
             ||||| || ||||||||||||||||||||||
Sbjct: 32811 accttctacctttatctcagcttaacacagg 32841



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 97/113 (85%)
 Strand = Plus / Plus

                                                                         
Query: 93    gccctaacagataaagggaagtttttactgtctgctcgacgattcagacacggggcacac 152
             |||||||| |||||||| |||||| | ||| |||||||| | |||||| |||||||||| 
Sbjct: 34211 gccctaacggataaaggaaagtttctgctggctgctcgaaggttcagaaacggggcacat 34270

                                                                  
Query: 153   actgaatatatcatctcgtatgactctgatgatctatatccaggaagtaattc 205
             || ||||||||||| || ||||| | ||||||||||| ||||||||| |||||
Sbjct: 34271 acagaatatatcatttcctatgattgtgatgatctatttccaggaagcaattc 34323
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  172 bits (87), Expect = 6e-40
 Identities = 189/223 (84%)
 Strand = Plus / Plus

                                                                            
Query: 222      agatcggacttcctggggacaaagttcatcatgtacgacaatcagaaaccatacgacggt 281
                ||||| ||||||||||| |||||||||||||| || || |  |||  ||||||||| |||
Sbjct: 25300415 agatctgacttcctgggtacaaagttcatcatctatgatagccagccaccatacgatggt 25300474

                                                                            
Query: 282      gccaagtccttgaagagccgatcaagtcgtcgctttgcaactaaacaaatcagcccaaac 341
                || ||| |||    ||||| ||| ||||||||||||||||  ||||| || | |||||| 
Sbjct: 25300475 gcaaagccctcacggagccaatcgagtcgtcgctttgcaagcaaacagattaacccaaat 25300534

                                                                            
Query: 342      gattcaggcagtaatcttgaagttggacaagtgtcatacaggttcaacttcctcaaatca 401
                | ||||||| |||||  ||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 25300535 gtttcaggcggtaattatgaagttggacaagtgtcatacaagttcaacttcctcaaatca 25300594

                                                           
Query: 402      agagggccgagaagaatgcactgcagtatccagtgccctgtag 444
                ||||| || ||||||||||| |||| |||||||||||| ||||
Sbjct: 25300595 agaggaccaagaagaatgcagtgcaatatccagtgccccgtag 25300637



 Score =  109 bits (55), Expect = 8e-21
 Identities = 82/91 (90%)
 Strand = Plus / Plus

                                                                            
Query: 3        cagcctggaccgagggatgcgccgatgcactgcttcatcaggaggaacaaaagcacgtcc 62
                ||||||||||| |||||||| |||||||||||||||||||||||||||||||  |  || 
Sbjct: 25298147 cagcctggaccaagggatgctccgatgcactgcttcatcaggaggaacaaaaagaactcg 25298206

                                               
Query: 63       accttttatctttatctcagcttaacacagg 93
                ||||| || ||||||||||||||||||||||
Sbjct: 25298207 accttctacctttatctcagcttaacacagg 25298237



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 97/113 (85%)
 Strand = Plus / Plus

                                                                            
Query: 93       gccctaacagataaagggaagtttttactgtctgctcgacgattcagacacggggcacac 152
                |||||||| |||||||| |||||| | ||| |||||||| | |||||| |||||||||| 
Sbjct: 25299607 gccctaacggataaaggaaagtttctgctggctgctcgaaggttcagaaacggggcacat 25299666

                                                                     
Query: 153      actgaatatatcatctcgtatgactctgatgatctatatccaggaagtaattc 205
                || ||||||||||| || ||||| | ||||||||||| ||||||||| |||||
Sbjct: 25299667 acagaatatatcatttcctatgattgtgatgatctatttccaggaagcaattc 25299719
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>ref|NM_191313.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1107

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                              
Query: 2   gcagcctggaccgagggatgcgccgatgcactgcttcatcaggaggaacaa 52
           |||||||||||| ||||| || || ||||| || ||||||| |||||||||
Sbjct: 339 gcagcctggaccaagggacgcaccaatgcagtgtttcatcaagaggaacaa 389
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                                   
Query: 2        gcagcctggaccgagggatgcgccgatgcactgcttcatcaggaggaacaa 52
                |||||||||||| ||||| || || ||||| || ||||||| |||||||||
Sbjct: 31922378 gcagcctggaccaagggacgcaccaatgcagtgtttcatcaagaggaacaa 31922328
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>dbj|AP003409.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1131G08
          Length = 158241

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                                 
Query: 2      gcagcctggaccgagggatgcgccgatgcactgcttcatcaggaggaacaa 52
              |||||||||||| ||||| || || ||||| || ||||||| |||||||||
Sbjct: 108456 gcagcctggaccaagggacgcaccaatgcagtgtttcatcaagaggaacaa 108406
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>dbj|AK106853.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-118-B03, full
           insert sequence
          Length = 1736

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                              
Query: 2   gcagcctggaccgagggatgcgccgatgcactgcttcatcaggaggaacaa 52
           |||||||||||| ||||| || || ||||| || ||||||| |||||||||
Sbjct: 406 gcagcctggaccaagggacgcaccaatgcagtgtttcatcaagaggaacaa 456
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>dbj|AP003256.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0460E08
          Length = 170021

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                                
Query: 2     gcagcctggaccgagggatgcgccgatgcactgcttcatcaggaggaacaa 52
             |||||||||||| ||||| || || ||||| || ||||||| |||||||||
Sbjct: 19105 gcagcctggaccaagggacgcaccaatgcagtgtttcatcaagaggaacaa 19055
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>ref|NM_202180.1| Arabidopsis thaliana phosphoric diester hydrolase/ transcription
            factor AT1G25280 transcript variant AT1G25280.2 mRNA,
            complete cds
          Length = 2049

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                             
Query: 213  ggaaagctgagatcggacttcctggggacaaagttcatcatgtacgaca 261
            |||||||| |||||  ||||||| |||||||||||| |  |||||||||
Sbjct: 1091 ggaaagctcagatcaaacttccttgggacaaagttcttggtgtacgaca 1139
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>ref|NM_102338.2| Arabidopsis thaliana phosphoric diester hydrolase/ transcription
            factor AT1G25280 transcript variant AT1G25280.1 mRNA,
            complete cds
          Length = 2112

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                             
Query: 213  ggaaagctgagatcggacttcctggggacaaagttcatcatgtacgaca 261
            |||||||| |||||  ||||||| |||||||||||| |  |||||||||
Sbjct: 1154 ggaaagctcagatcaaacttccttgggacaaagttcttggtgtacgaca 1202
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>gb|AF487271.1| Arabidopsis thaliana tubby-like protein TULP10 (TULP10) mRNA,
           complete cds
          Length = 1338

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                            
Query: 213 ggaaagctgagatcggacttcctggggacaaagttcatcatgtacgaca 261
           |||||||| |||||  ||||||| |||||||||||| |  |||||||||
Sbjct: 577 ggaaagctcagatcaaacttccttgggacaaagttcttggtgtacgaca 625
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>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome
          Length = 5373180

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 344     ttcaggcagtaatcttgaagt 364
               |||||||||||||||||||||
Sbjct: 4903510 ttcaggcagtaatcttgaagt 4903530
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>gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome
          Length = 3544738

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 24      ccgatgcactgcttcatcagg 44
               |||||||||||||||||||||
Sbjct: 1493024 ccgatgcactgcttcatcagg 1493044
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>gb|BT006290.1| Arabidopsis thaliana At1g25280 mRNA, complete cds
          Length = 804

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                            
Query: 213 ggaaagctgagatcggacttcctggggacaaagttcatcatgtacgaca 261
           |||||||| |||||  ||||||| |||||||||||| |  |||||||||
Sbjct: 43  ggaaagctcagatcaaacttccttgggacaaagttcttggtgtacgaca 91
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>emb|BX814427.1|CNS0AC2Y Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB73ZC03 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 2022

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                             
Query: 213  ggaaagctgagatcggacttcctggggacaaagttcatcatgtacgaca 261
            |||||||| |||||  ||||||| |||||||||||| |  |||||||||
Sbjct: 1158 ggaaagctcagatcaaacttccttgggacaaagttcttggtgtacgaca 1206
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>emb|BX813359.1|CNS0ABZ8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB12ZB05 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1900

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                             
Query: 213  ggaaagctgagatcggacttcctggggacaaagttcatcatgtacgaca 261
            |||||||| |||||  ||||||| |||||||||||| |  |||||||||
Sbjct: 997  ggaaagctcagatcaaacttccttgggacaaagttcttggtgtacgaca 1045
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>gb|BT001997.1| Arabidopsis thaliana unknown protein (At1g25280) mRNA, complete cds
          Length = 2019

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                             
Query: 213  ggaaagctgagatcggacttcctggggacaaagttcatcatgtacgaca 261
            |||||||| |||||  ||||||| |||||||||||| |  |||||||||
Sbjct: 1091 ggaaagctcagatcaaacttccttgggacaaagttcttggtgtacgaca 1139
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>gb|AY104059.1| Zea mays PCO082079 mRNA sequence
          Length = 1371

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 51/61 (83%)
 Strand = Plus / Plus

                                                                       
Query: 359 tgaagttggacaagtgtcatacaggttcaacttcctcaaatcaagagggccgagaagaat 418
           |||||||||||| || |||||||  | |||||| |||||||| ||||| || || |||||
Sbjct: 693 tgaagttggacaggtttcatacaaatacaacttgctcaaatccagaggccccaggagaat 752

            
Query: 419 g 419
           |
Sbjct: 753 g 753
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>emb|CR385071.9| Zebrafish DNA sequence from clone CH211-245B7 in linkage group 24,
              complete sequence
          Length = 160655

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 323    taaacaaatcagcccaaacga 343
              |||||||||||||||||||||
Sbjct: 103630 taaacaaatcagcccaaacga 103610
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>ref|NM_000180.1| Homo sapiens guanylate cyclase 2D, membrane (retina-specific)
            (GUCY2D), mRNA
          Length = 3621

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 29   gcactgcttcatcaggagga 48
            ||||||||||||||||||||
Sbjct: 2434 gcactgcttcatcaggagga 2415
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>gb|AC124576.4| Mus musculus BAC clone RP23-162H6 from chromosome 16, complete sequence
          Length = 233527

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 101   agataaagggaagtttttactgtc 124
             |||| |||||||||||||||||||
Sbjct: 59145 agatcaagggaagtttttactgtc 59168
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>gb|AC129492.6| Homo sapiens chromosome 17, clone RP11-599B13, complete sequence
          Length = 196037

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 29   gcactgcttcatcaggagga 48
            ||||||||||||||||||||
Sbjct: 8853 gcactgcttcatcaggagga 8834
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>gb|AC127172.13| Mus musculus strain C57BL/6J clone rp23-387d2 map 17, complete sequence
          Length = 203077

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 342   gattcaggcagtaatcttgaagtt 365
             ||||||||||||| ||||||||||
Sbjct: 27604 gattcaggcagtactcttgaagtt 27581
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>emb|AL136991.26| Human DNA sequence from clone RP11-189J1 on chromosome 20 Contains the 3'
              end of the gene for a novel protein (LOC284776), complete
              sequence
          Length = 169342

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 351    agtaatcttgaagttggaca 370
              ||||||||||||||||||||
Sbjct: 166540 agtaatcttgaagttggaca 166521
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>ref|XM_961359.1| PREDICTED: Tribolium castaneum similar to CG9384-PA (LOC654917),
           mRNA
          Length = 2007

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 203 ttcaggcgttggaaagctga 222
           ||||||||||||||||||||
Sbjct: 624 ttcaggcgttggaaagctga 605
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>gb|AC104581.22| Homo sapiens chromosome 17, clone RP11-1099M24, complete sequence
          Length = 187718

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 29     gcactgcttcatcaggagga 48
              ||||||||||||||||||||
Sbjct: 177214 gcactgcttcatcaggagga 177195
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>gb|AC107913.7| Homo sapiens chromosome 17, clone CTD-3051C7, complete sequence
          Length = 128953

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 29     gcactgcttcatcaggagga 48
              ||||||||||||||||||||
Sbjct: 109273 gcactgcttcatcaggagga 109292
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>gb|AC104762.7| Homo sapiens chromosome 17, clone RP11-769H22, complete sequence
          Length = 162678

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 29   gcactgcttcatcaggagga 48
            ||||||||||||||||||||
Sbjct: 8853 gcactgcttcatcaggagga 8834
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>dbj|AK125534.1| Homo sapiens cDNA FLJ43546 fis, clone PROST2015243
          Length = 3052

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 29   gcactgcttcatcaggagga 48
            ||||||||||||||||||||
Sbjct: 2402 gcactgcttcatcaggagga 2421
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>gb|AY140473.1| Arabidopsis lyrata clone P1WB1-C01-KAR99-14 unknown protein gene,
            exons 1 through 4 and partial cds
          Length = 1678

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                    
Query: 222  agatcggacttcctggggacaaagttcatcatgtacgaca 261
            |||||| ||||||| |||||||||||| |  |||||||||
Sbjct: 975  agatcgaacttccttgggacaaagttcttggtgtacgaca 1014
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>gb|AY140472.1| Arabidopsis lyrata clone P1WB1-C01-KAR99-11 unknown protein gene,
            exons 1 through 4 and partial cds
          Length = 1678

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                    
Query: 222  agatcggacttcctggggacaaagttcatcatgtacgaca 261
            |||||| ||||||| |||||||||||| |  |||||||||
Sbjct: 975  agatcgaacttccttgggacaaagttcttggtgtacgaca 1014
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>gb|AY140471.1| Arabidopsis lyrata clone P1WB1-C01-KAR99-4 unknown protein gene,
            exons 1 through 4 and partial cds
          Length = 1678

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                    
Query: 222  agatcggacttcctggggacaaagttcatcatgtacgaca 261
            |||||| ||||||| |||||||||||| |  |||||||||
Sbjct: 975  agatcgaacttccttgggacaaagttcttggtgtacgaca 1014
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>gb|AY140470.1| Arabidopsis lyrata clone P1WB1-C01-KAR99-3 unknown protein gene,
            exons 1 through 4 and partial cds
          Length = 1678

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                    
Query: 222  agatcggacttcctggggacaaagttcatcatgtacgaca 261
            |||||| ||||||| |||||||||||| |  |||||||||
Sbjct: 975  agatcgaacttccttgggacaaagttcttggtgtacgaca 1014
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>emb|AL844859.5| Mouse DNA sequence from clone RP23-263O20 on chromosome 2, complete
             sequence
          Length = 151493

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 415   gaatgcactgcagtatccagtgcc 438
             |||||||||||||| |||||||||
Sbjct: 85494 gaatgcactgcagtttccagtgcc 85517
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>emb|AL049875.2|CNS0000O Human chromosome 14 DNA sequence BAC R-111A21 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 163118

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 149    acacactgaatatatcatct 168
              ||||||||||||||||||||
Sbjct: 128212 acacactgaatatatcatct 128231
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>gb|M92432.1|HUMRETGC Homo sapiens retinal guanylyl cyclase (retGC) mRNA, complete cds
          Length = 3621

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 29   gcactgcttcatcaggagga 48
            ||||||||||||||||||||
Sbjct: 2434 gcactgcttcatcaggagga 2415
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>emb|AL589878.12| Mouse DNA sequence from clone RP23-351C7 on chromosome 15, complete
              sequence
          Length = 203949

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 342    gattcaggcagtaatcttgaagtt 365
              ||||||||||||| ||||||||||
Sbjct: 176340 gattcaggcagtactcttgaagtt 176363
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>emb|AJ222657.1|HSRSGCG Homo sapiens gene encoding retina-specific guanylyl cyclase
          Length = 12810

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 29   gcactgcttcatcaggagga 48
            ||||||||||||||||||||
Sbjct: 9934 gcactgcttcatcaggagga 9915


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,658,937
Number of Sequences: 3902068
Number of extensions: 3658937
Number of successful extensions: 64043
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 63903
Number of HSP's gapped (non-prelim): 130
length of query: 460
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 438
effective length of database: 17,147,199,772
effective search space: 7510473500136
effective search space used: 7510473500136
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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