ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd23i20 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_190949.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1086 Score = 559 bits (282), Expect = e-156 Identities = 375/406 (92%) Strand = Plus / Plus Query: 107 ggcggcgagggggccatgtcggagtcggtgctccgcaaggtgctcgtctcctactgctac 166 ||||||||||||| ||||||||| |||||| |||| |||||||| || || ||| ||| Sbjct: 34 ggcggcgaggggggcatgtcggattcggtgatccggaaggtgctggtgtcgtacatgtac 93 Query: 167 gtcgcggtgtggatcttcctctccttcaccgtcatcgtctacaacaagtacatcctcgac 226 || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 94 gtggcggtgtggatcttcctctccttcacggtcatcgtctacaacaagtacatcctcgac 153 Query: 227 cccaagatgtacaactggcccttccccatctccctcaccatggtgcacatggccttctgc 286 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 154 cccaagatgtacaactggcccttccccatctcgctcaccatggtgcacatggccttctgc 213 Query: 287 tcctccctcgccgtcgcgctcgtccgcgtcttccgcgtcgtcgacctcccctcctcgccc 346 || ||||||||| |||||||||||||| || ||||||||||||| ||||| || || ||| Sbjct: 214 tcgtccctcgccatcgcgctcgtccgcctcctccgcgtcgtcgagctcccgtcgtccccc 273 Query: 347 gccatgaccacgcagctctacaccagctccgtcctccccatcggcgcgctctactccctc 406 |||||||| |||||||||||||| ||| || ||||||||||||||||||||||| ||| Sbjct: 274 gccatgacgccgcagctctacacctcctcggtgctccccatcggcgcgctctactcgctc 333 Query: 407 tccctctggttctccaactccgcatacatctacctctccgtctccttcatccagatgctc 466 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 334 tccctctggttctccaactccgcgtacatctacctctccgtctccttcatccagatgctc 393 Query: 467 aaggcgctcatgcccgtcgccgtctactccatcggggtgctcttca 512 ||||||||||||||||||||||| ||||||||||| |||||||||| Sbjct: 394 aaggcgctcatgcccgtcgccgtgtactccatcggcgtgctcttca 439
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 559 bits (282), Expect = e-156 Identities = 375/406 (92%) Strand = Plus / Minus Query: 107 ggcggcgagggggccatgtcggagtcggtgctccgcaaggtgctcgtctcctactgctac 166 ||||||||||||| ||||||||| |||||| |||| |||||||| || || ||| ||| Sbjct: 34012185 ggcggcgaggggggcatgtcggattcggtgatccggaaggtgctggtgtcgtacatgtac 34012126 Query: 167 gtcgcggtgtggatcttcctctccttcaccgtcatcgtctacaacaagtacatcctcgac 226 || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 34012125 gtggcggtgtggatcttcctctccttcacggtcatcgtctacaacaagtacatcctcgac 34012066 Query: 227 cccaagatgtacaactggcccttccccatctccctcaccatggtgcacatggccttctgc 286 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 34012065 cccaagatgtacaactggcccttccccatctcgctcaccatggtgcacatggccttctgc 34012006 Query: 287 tcctccctcgccgtcgcgctcgtccgcgtcttccgcgtcgtcgacctcccctcctcgccc 346 || ||||||||| |||||||||||||| || ||||||||||||| ||||| || || ||| Sbjct: 34012005 tcgtccctcgccatcgcgctcgtccgcctcctccgcgtcgtcgagctcccgtcgtccccc 34011946 Query: 347 gccatgaccacgcagctctacaccagctccgtcctccccatcggcgcgctctactccctc 406 |||||||| |||||||||||||| ||| || ||||||||||||||||||||||| ||| Sbjct: 34011945 gccatgacgccgcagctctacacctcctcggtgctccccatcggcgcgctctactcgctc 34011886 Query: 407 tccctctggttctccaactccgcatacatctacctctccgtctccttcatccagatgctc 466 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 34011885 tccctctggttctccaactccgcgtacatctacctctccgtctccttcatccagatgctc 34011826 Query: 467 aaggcgctcatgcccgtcgccgtctactccatcggggtgctcttca 512 ||||||||||||||||||||||| ||||||||||| |||||||||| Sbjct: 34011825 aaggcgctcatgcccgtcgccgtgtactccatcggcgtgctcttca 34011780 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 91 catggcgaaggaggccggcggcgagggg 118 ||||| ||||||||||| |||||||||| Sbjct: 41200834 catggggaaggaggccgtcggcgagggg 41200807
>dbj|AP003232.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0034E02 Length = 165497 Score = 559 bits (282), Expect = e-156 Identities = 375/406 (92%) Strand = Plus / Minus Query: 107 ggcggcgagggggccatgtcggagtcggtgctccgcaaggtgctcgtctcctactgctac 166 ||||||||||||| ||||||||| |||||| |||| |||||||| || || ||| ||| Sbjct: 8663 ggcggcgaggggggcatgtcggattcggtgatccggaaggtgctggtgtcgtacatgtac 8604 Query: 167 gtcgcggtgtggatcttcctctccttcaccgtcatcgtctacaacaagtacatcctcgac 226 || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 8603 gtggcggtgtggatcttcctctccttcacggtcatcgtctacaacaagtacatcctcgac 8544 Query: 227 cccaagatgtacaactggcccttccccatctccctcaccatggtgcacatggccttctgc 286 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 8543 cccaagatgtacaactggcccttccccatctcgctcaccatggtgcacatggccttctgc 8484 Query: 287 tcctccctcgccgtcgcgctcgtccgcgtcttccgcgtcgtcgacctcccctcctcgccc 346 || ||||||||| |||||||||||||| || ||||||||||||| ||||| || || ||| Sbjct: 8483 tcgtccctcgccatcgcgctcgtccgcctcctccgcgtcgtcgagctcccgtcgtccccc 8424 Query: 347 gccatgaccacgcagctctacaccagctccgtcctccccatcggcgcgctctactccctc 406 |||||||| |||||||||||||| ||| || ||||||||||||||||||||||| ||| Sbjct: 8423 gccatgacgccgcagctctacacctcctcggtgctccccatcggcgcgctctactcgctc 8364 Query: 407 tccctctggttctccaactccgcatacatctacctctccgtctccttcatccagatgctc 466 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 8363 tccctctggttctccaactccgcgtacatctacctctccgtctccttcatccagatgctc 8304 Query: 467 aaggcgctcatgcccgtcgccgtctactccatcggggtgctcttca 512 ||||||||||||||||||||||| ||||||||||| |||||||||| Sbjct: 8303 aaggcgctcatgcccgtcgccgtgtactccatcggcgtgctcttca 8258
>dbj|AP003221.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0003D09 Length = 161970 Score = 559 bits (282), Expect = e-156 Identities = 375/406 (92%) Strand = Plus / Minus Query: 107 ggcggcgagggggccatgtcggagtcggtgctccgcaaggtgctcgtctcctactgctac 166 ||||||||||||| ||||||||| |||||| |||| |||||||| || || ||| ||| Sbjct: 143628 ggcggcgaggggggcatgtcggattcggtgatccggaaggtgctggtgtcgtacatgtac 143569 Query: 167 gtcgcggtgtggatcttcctctccttcaccgtcatcgtctacaacaagtacatcctcgac 226 || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 143568 gtggcggtgtggatcttcctctccttcacggtcatcgtctacaacaagtacatcctcgac 143509 Query: 227 cccaagatgtacaactggcccttccccatctccctcaccatggtgcacatggccttctgc 286 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 143508 cccaagatgtacaactggcccttccccatctcgctcaccatggtgcacatggccttctgc 143449 Query: 287 tcctccctcgccgtcgcgctcgtccgcgtcttccgcgtcgtcgacctcccctcctcgccc 346 || ||||||||| |||||||||||||| || ||||||||||||| ||||| || || ||| Sbjct: 143448 tcgtccctcgccatcgcgctcgtccgcctcctccgcgtcgtcgagctcccgtcgtccccc 143389 Query: 347 gccatgaccacgcagctctacaccagctccgtcctccccatcggcgcgctctactccctc 406 |||||||| |||||||||||||| ||| || ||||||||||||||||||||||| ||| Sbjct: 143388 gccatgacgccgcagctctacacctcctcggtgctccccatcggcgcgctctactcgctc 143329 Query: 407 tccctctggttctccaactccgcatacatctacctctccgtctccttcatccagatgctc 466 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 143328 tccctctggttctccaactccgcgtacatctacctctccgtctccttcatccagatgctc 143269 Query: 467 aaggcgctcatgcccgtcgccgtctactccatcggggtgctcttca 512 ||||||||||||||||||||||| ||||||||||| |||||||||| Sbjct: 143268 aaggcgctcatgcccgtcgccgtgtactccatcggcgtgctcttca 143223
>gb|AC112160.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1579_G03, complete sequence Length = 121466 Score = 547 bits (276), Expect = e-152 Identities = 363/392 (92%) Strand = Plus / Plus Query: 121 catgtcggagtcggtgctccgcaaggtgctcgtctcctactgctacgtcgcggtgtggat 180 ||||||||||||||||||||||||||||||| |||||||||||||||||| || ||||| Sbjct: 28749 catgtcggagtcggtgctccgcaaggtgctcctctcctactgctacgtcggcgtctggat 28808 Query: 181 cttcctctccttcaccgtcatcgtctacaacaagtacatcctcgaccccaagatgtacaa 240 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28809 cttcctctccttcgccgtcatcgtctacaacaagtacatcctcgaccccaagatgtacaa 28868 Query: 241 ctggcccttccccatctccctcaccatggtgcacatggccttctgctcctccctcgccgt 300 |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 28869 ctggcccttcccgatctccctcaccatggtccacatggccttctgctcctccctcgccgt 28928 Query: 301 cgcgctcgtccgcgtcttccgcgtcgtcgacctcccctcctcgcccgccatgaccacgca 360 ||| ||||||||| || ||||||||||||| | ||||| ||||||||||||||| |||| Sbjct: 28929 cgccctcgtccgcctcctccgcgtcgtcgagccgccctcgtcgcccgccatgaccccgca 28988 Query: 361 gctctacaccagctccgtcctccccatcggcgcgctctactccctctccctctggttctc 420 |||||||||| |||||| | |||||||||||||||||| || | || || |||||||| Sbjct: 28989 gctctacacctcctccgttgttcccatcggcgcgctctacgccatgtcgctgtggttctc 29048 Query: 421 caactccgcatacatctacctctccgtctccttcatccagatgctcaaggcgctcatgcc 480 |||||| || ||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 29049 caactcggcctacatctacctctccgtgtccttcatccagatgctcaaggcgctcatgcc 29108 Query: 481 cgtcgccgtctactccatcggggtgctcttca 512 ||||||||| |||||||||||||||||||||| Sbjct: 29109 cgtcgccgtgtactccatcggggtgctcttca 29140
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 547 bits (276), Expect = e-152 Identities = 363/392 (92%) Strand = Plus / Plus Query: 121 catgtcggagtcggtgctccgcaaggtgctcgtctcctactgctacgtcgcggtgtggat 180 ||||||||||||||||||||||||||||||| |||||||||||||||||| || ||||| Sbjct: 24142510 catgtcggagtcggtgctccgcaaggtgctcctctcctactgctacgtcggcgtctggat 24142569 Query: 181 cttcctctccttcaccgtcatcgtctacaacaagtacatcctcgaccccaagatgtacaa 240 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24142570 cttcctctccttcgccgtcatcgtctacaacaagtacatcctcgaccccaagatgtacaa 24142629 Query: 241 ctggcccttccccatctccctcaccatggtgcacatggccttctgctcctccctcgccgt 300 |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 24142630 ctggcccttcccgatctccctcaccatggtccacatggccttctgctcctccctcgccgt 24142689 Query: 301 cgcgctcgtccgcgtcttccgcgtcgtcgacctcccctcctcgcccgccatgaccacgca 360 ||| ||||||||| || ||||||||||||| | ||||| ||||||||||||||| |||| Sbjct: 24142690 cgccctcgtccgcctcctccgcgtcgtcgagccgccctcgtcgcccgccatgaccccgca 24142749 Query: 361 gctctacaccagctccgtcctccccatcggcgcgctctactccctctccctctggttctc 420 |||||||||| |||||| | |||||||||||||||||| || | || || |||||||| Sbjct: 24142750 gctctacacctcctccgttgttcccatcggcgcgctctacgccatgtcgctgtggttctc 24142809 Query: 421 caactccgcatacatctacctctccgtctccttcatccagatgctcaaggcgctcatgcc 480 |||||| || ||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 24142810 caactcggcctacatctacctctccgtgtccttcatccagatgctcaaggcgctcatgcc 24142869 Query: 481 cgtcgccgtctactccatcggggtgctcttca 512 ||||||||| |||||||||||||||||||||| Sbjct: 24142870 cgtcgccgtgtactccatcggggtgctcttca 24142901
>dbj|AK059987.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-H01, full insert sequence Length = 1312 Score = 547 bits (276), Expect = e-152 Identities = 363/392 (92%) Strand = Plus / Plus Query: 121 catgtcggagtcggtgctccgcaaggtgctcgtctcctactgctacgtcgcggtgtggat 180 ||||||||||||||||||||||||||||||| |||||||||||||||||| || ||||| Sbjct: 117 catgtcggagtcggtgctccgcaaggtgctcctctcctactgctacgtcggcgtctggat 176 Query: 181 cttcctctccttcaccgtcatcgtctacaacaagtacatcctcgaccccaagatgtacaa 240 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177 cttcctctccttcgccgtcatcgtctacaacaagtacatcctcgaccccaagatgtacaa 236 Query: 241 ctggcccttccccatctccctcaccatggtgcacatggccttctgctcctccctcgccgt 300 |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 237 ctggcccttcccgatctccctcaccatggtccacatggccttctgctcctccctcgccgt 296 Query: 301 cgcgctcgtccgcgtcttccgcgtcgtcgacctcccctcctcgcccgccatgaccacgca 360 ||| ||||||||| || ||||||||||||| | ||||| ||||||||||||||| |||| Sbjct: 297 cgccctcgtccgcctcctccgcgtcgtcgagccgccctcgtcgcccgccatgaccccgca 356 Query: 361 gctctacaccagctccgtcctccccatcggcgcgctctactccctctccctctggttctc 420 |||||||||| |||||| | |||||||||||||||||| || | || || |||||||| Sbjct: 357 gctctacacctcctccgttgttcccatcggcgcgctctacgccatgtcgctgtggttctc 416 Query: 421 caactccgcatacatctacctctccgtctccttcatccagatgctcaaggcgctcatgcc 480 |||||| || ||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 417 caactcggcctacatctacctctccgtgtccttcatccagatgctcaaggcgctcatgcc 476 Query: 481 cgtcgccgtctactccatcggggtgctcttca 512 ||||||||| |||||||||||||||||||||| Sbjct: 477 cgtcgccgtgtactccatcggggtgctcttca 508
>dbj|AK071846.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023120O09, full insert sequence Length = 1576 Score = 539 bits (272), Expect = e-150 Identities = 362/392 (92%) Strand = Plus / Plus Query: 121 catgtcggagtcggtgctccgcaaggtgctcgtctcctactgctacgtcgcggtgtggat 180 ||||||||||||||||||||||||||||||| |||||||||||||||||| || ||||| Sbjct: 127 catgtcggagtcggtgctccgcaaggtgctcctctcctactgctacgtcggcgtctggat 186 Query: 181 cttcctctccttcaccgtcatcgtctacaacaagtacatcctcgaccccaagatgtacaa 240 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 187 cttcctctccttcgccgtcatcgtctacaacaagtacatcctcgaccccaagatgtacaa 246 Query: 241 ctggcccttccccatctccctcaccatggtgcacatggccttctgctcctccctcgccgt 300 |||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 247 ctggcccttcccgatctccctcaccatggtccacatggccttctgctcctccctcgccgt 306 Query: 301 cgcgctcgtccgcgtcttccgcgtcgtcgacctcccctcctcgcccgccatgaccacgca 360 ||| ||||||||| || ||||||||| ||| | ||||| ||||||||||||||| |||| Sbjct: 307 cgccctcgtccgcctcctccgcgtcgccgagccgccctcgtcgcccgccatgaccccgca 366 Query: 361 gctctacaccagctccgtcctccccatcggcgcgctctactccctctccctctggttctc 420 |||||||||| |||||| | |||||||||||||||||| || | || || |||||||| Sbjct: 367 gctctacacctcctccgttgttcccatcggcgcgctctacgccatgtcgctgtggttctc 426 Query: 421 caactccgcatacatctacctctccgtctccttcatccagatgctcaaggcgctcatgcc 480 |||||| || ||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 427 caactcggcctacatctacctctccgtgtccttcatccagatgctcaaggcgctcatgcc 486 Query: 481 cgtcgccgtctactccatcggggtgctcttca 512 ||||||||| |||||||||||||||||||||| Sbjct: 487 cgtcgccgtgtactccatcggggtgctcttca 518
>gb|AC123527.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0068G15, complete sequence Length = 146175 Score = 305 bits (154), Expect = 8e-80 Identities = 264/298 (88%), Gaps = 2/298 (0%) Strand = Plus / Plus Query: 200 atcgtctacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctcc 259 ||||| ||||||||||||||||| || |||||||||||||||||||| |||||||||||| Sbjct: 29847 atcgtgtacaacaagtacatccttgatcccaagatgtacaactggccattccccatctcc 29906 Query: 260 ctcaccatggtgcacatggccttctgctcctccctcgccgtcgcgctcgtccgcgtcttc 319 ||||||||| | |||||||| |||||| ||||||||||||| | |||||| |||||| || Sbjct: 29907 ctcaccatgatccacatggcgttctgcgcctccctcgccgtggtgctcgttcgcgtcctc 29966 Query: 320 cgcgtcgtcgacctcccctcctcgcccgccatgaccacgcagc-tctacaccagctccgt 378 |||||||||| | | || | ||||| ||||||| | |||| ||||| || |||||| Sbjct: 29967 cgcgtcgtcgccgtgccggcgtcgccgcccatgacgcc-cagcctctacgccgcctccgt 30025 Query: 379 cctccccatcggcgcgctctactccctctccctctggttctccaactccgcatacatcta 438 | | |||||||||||||||||| | || || ||||||||||||||||||||||||||||| Sbjct: 30026 cgtgcccatcggcgcgctctacgcgctgtcgctctggttctccaactccgcatacatcta 30085 Query: 439 cctctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtctactcc 496 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 30086 cctttccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtctactcc 30143
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 305 bits (154), Expect = 8e-80 Identities = 264/298 (88%), Gaps = 2/298 (0%) Strand = Plus / Plus Query: 200 atcgtctacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctcc 259 ||||| ||||||||||||||||| || |||||||||||||||||||| |||||||||||| Sbjct: 1812017 atcgtgtacaacaagtacatccttgatcccaagatgtacaactggccattccccatctcc 1812076 Query: 260 ctcaccatggtgcacatggccttctgctcctccctcgccgtcgcgctcgtccgcgtcttc 319 ||||||||| | |||||||| |||||| ||||||||||||| | |||||| |||||| || Sbjct: 1812077 ctcaccatgatccacatggcgttctgcgcctccctcgccgtggtgctcgttcgcgtcctc 1812136 Query: 320 cgcgtcgtcgacctcccctcctcgcccgccatgaccacgcagc-tctacaccagctccgt 378 |||||||||| | | || | ||||| ||||||| | |||| ||||| || |||||| Sbjct: 1812137 cgcgtcgtcgccgtgccggcgtcgccgcccatgacgcc-cagcctctacgccgcctccgt 1812195 Query: 379 cctccccatcggcgcgctctactccctctccctctggttctccaactccgcatacatcta 438 | | |||||||||||||||||| | || || ||||||||||||||||||||||||||||| Sbjct: 1812196 cgtgcccatcggcgcgctctacgcgctgtcgctctggttctccaactccgcatacatcta 1812255 Query: 439 cctctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtctactcc 496 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1812256 cctttccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtctactcc 1812313
>dbj|AK107562.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-B12, full insert sequence Length = 1589 Score = 305 bits (154), Expect = 8e-80 Identities = 264/298 (88%), Gaps = 2/298 (0%) Strand = Plus / Plus Query: 200 atcgtctacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctcc 259 ||||| ||||||||||||||||| || |||||||||||||||||||| |||||||||||| Sbjct: 278 atcgtgtacaacaagtacatccttgatcccaagatgtacaactggccattccccatctcc 337 Query: 260 ctcaccatggtgcacatggccttctgctcctccctcgccgtcgcgctcgtccgcgtcttc 319 ||||||||| | |||||||| |||||| ||||||||||||| | |||||| |||||| || Sbjct: 338 ctcaccatgatccacatggcgttctgcgcctccctcgccgtggtgctcgttcgcgtcctc 397 Query: 320 cgcgtcgtcgacctcccctcctcgcccgccatgaccacgcagc-tctacaccagctccgt 378 |||||||||| | | || | ||||| ||||||| | |||| ||||| || |||||| Sbjct: 398 cgcgtcgtcgccgtgccggcgtcgccgcccatgacgcc-cagcctctacgccgcctccgt 456 Query: 379 cctccccatcggcgcgctctactccctctccctctggttctccaactccgcatacatcta 438 | | |||||||||||||||||| | || || ||||||||||||||||||||||||||||| Sbjct: 457 cgtgcccatcggcgcgctctacgcgctgtcgctctggttctccaactccgcatacatcta 516 Query: 439 cctctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtctactcc 496 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 517 cctttccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtctactcc 574
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 305 bits (154), Expect = 8e-80 Identities = 264/298 (88%), Gaps = 2/298 (0%) Strand = Plus / Plus Query: 200 atcgtctacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctcc 259 ||||| ||||||||||||||||| || |||||||||||||||||||| |||||||||||| Sbjct: 1809738 atcgtgtacaacaagtacatccttgatcccaagatgtacaactggccattccccatctcc 1809797 Query: 260 ctcaccatggtgcacatggccttctgctcctccctcgccgtcgcgctcgtccgcgtcttc 319 ||||||||| | |||||||| |||||| ||||||||||||| | |||||| |||||| || Sbjct: 1809798 ctcaccatgatccacatggcgttctgcgcctccctcgccgtggtgctcgttcgcgtcctc 1809857 Query: 320 cgcgtcgtcgacctcccctcctcgcccgccatgaccacgcagc-tctacaccagctccgt 378 |||||||||| | | || | ||||| ||||||| | |||| ||||| || |||||| Sbjct: 1809858 cgcgtcgtcgccgtgccggcgtcgccgcccatgacgcc-cagcctctacgccgcctccgt 1809916 Query: 379 cctccccatcggcgcgctctactccctctccctctggttctccaactccgcatacatcta 438 | | |||||||||||||||||| | || || ||||||||||||||||||||||||||||| Sbjct: 1809917 cgtgcccatcggcgcgctctacgcgctgtcgctctggttctccaactccgcatacatcta 1809976 Query: 439 cctctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtctactcc 496 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1809977 cctttccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtctactcc 1810034
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 182 bits (92), Expect = 7e-43 Identities = 116/124 (93%) Strand = Plus / Plus Query: 373 ctccgtcctccccatcggcgcgctctactccctctccctctggttctccaactccgcata 432 ||||||| | || ||||||||||||||| | || || |||||||||||||||||||| || Sbjct: 1751260 ctccgtcgtgccgatcggcgcgctctacgcgctgtcgctctggttctccaactccgcgta 1751319 Query: 433 catctacctctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtcta 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1751320 catctacctctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtcta 1751379 Query: 493 ctcc 496 |||| Sbjct: 1751380 ctcc 1751383 Score = 170 bits (86), Expect = 3e-39 Identities = 119/130 (91%) Strand = Plus / Plus Query: 200 atcgtctacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctcc 259 ||||| ||||||||||||||||| || |||||||||||||||||||| |||||||||||| Sbjct: 1751087 atcgtgtacaacaagtacatccttgatcccaagatgtacaactggccattccccatctcc 1751146 Query: 260 ctcaccatggtgcacatggccttctgctcctccctcgccgtcgcgctcgtccgcgtcttc 319 ||||||||| | |||||||| |||||| ||||||||||||| | ||||||||||||| || Sbjct: 1751147 ctcaccatgatccacatggcgttctgcgcctccctcgccgtggtgctcgtccgcgtcctc 1751206 Query: 320 cgcgtcgtcg 329 |||||||||| Sbjct: 1751207 cgcgtcgtcg 1751216
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 182 bits (92), Expect = 7e-43 Identities = 116/124 (93%) Strand = Plus / Plus Query: 373 ctccgtcctccccatcggcgcgctctactccctctccctctggttctccaactccgcata 432 ||||||| | || ||||||||||||||| | || || |||||||||||||||||||| || Sbjct: 1751237 ctccgtcgtgccgatcggcgcgctctacgcgctgtcgctctggttctccaactccgcgta 1751296 Query: 433 catctacctctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtcta 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1751297 catctacctctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtcta 1751356 Query: 493 ctcc 496 |||| Sbjct: 1751357 ctcc 1751360 Score = 170 bits (86), Expect = 3e-39 Identities = 119/130 (91%) Strand = Plus / Plus Query: 200 atcgtctacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctcc 259 ||||| ||||||||||||||||| || |||||||||||||||||||| |||||||||||| Sbjct: 1751064 atcgtgtacaacaagtacatccttgatcccaagatgtacaactggccattccccatctcc 1751123 Query: 260 ctcaccatggtgcacatggccttctgctcctccctcgccgtcgcgctcgtccgcgtcttc 319 ||||||||| | |||||||| |||||| ||||||||||||| | ||||||||||||| || Sbjct: 1751124 ctcaccatgatccacatggcgttctgcgcctccctcgccgtggtgctcgtccgcgtcctc 1751183 Query: 320 cgcgtcgtcg 329 |||||||||| Sbjct: 1751184 cgcgtcgtcg 1751193
>emb|BX000502.2|CNS08CDS Oryza sativa chromosome 12, . BAC OSJNBb0041E01 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132026 Score = 182 bits (92), Expect = 7e-43 Identities = 116/124 (93%) Strand = Plus / Minus Query: 373 ctccgtcctccccatcggcgcgctctactccctctccctctggttctccaactccgcata 432 ||||||| | || ||||||||||||||| | || || |||||||||||||||||||| || Sbjct: 89223 ctccgtcgtgccgatcggcgcgctctacgcgctgtcgctctggttctccaactccgcgta 89164 Query: 433 catctacctctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtcta 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 89163 catctacctctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtcta 89104 Query: 493 ctcc 496 |||| Sbjct: 89103 ctcc 89100 Score = 170 bits (86), Expect = 3e-39 Identities = 119/130 (91%) Strand = Plus / Minus Query: 200 atcgtctacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctcc 259 ||||| ||||||||||||||||| || |||||||||||||||||||| |||||||||||| Sbjct: 89396 atcgtgtacaacaagtacatccttgatcccaagatgtacaactggccattccccatctcc 89337 Query: 260 ctcaccatggtgcacatggccttctgctcctccctcgccgtcgcgctcgtccgcgtcttc 319 ||||||||| | |||||||| |||||| ||||||||||||| | ||||||||||||| || Sbjct: 89336 ctcaccatgatccacatggcgttctgcgcctccctcgccgtggtgctcgtccgcgtcctc 89277 Query: 320 cgcgtcgtcg 329 |||||||||| Sbjct: 89276 cgcgtcgtcg 89267
>emb|BX000504.2|CNS08CDU Oryza sativa chromosome 12, . BAC OJ1239_F07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104307 Score = 182 bits (92), Expect = 7e-43 Identities = 116/124 (93%) Strand = Plus / Minus Query: 373 ctccgtcctccccatcggcgcgctctactccctctccctctggttctccaactccgcata 432 ||||||| | || ||||||||||||||| | || || |||||||||||||||||||| || Sbjct: 15661 ctccgtcgtgccgatcggcgcgctctacgcgctgtcgctctggttctccaactccgcgta 15602 Query: 433 catctacctctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtcta 492 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15601 catctacctctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtcta 15542 Query: 493 ctcc 496 |||| Sbjct: 15541 ctcc 15538 Score = 170 bits (86), Expect = 3e-39 Identities = 119/130 (91%) Strand = Plus / Minus Query: 200 atcgtctacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctcc 259 ||||| ||||||||||||||||| || |||||||||||||||||||| |||||||||||| Sbjct: 15834 atcgtgtacaacaagtacatccttgatcccaagatgtacaactggccattccccatctcc 15775 Query: 260 ctcaccatggtgcacatggccttctgctcctccctcgccgtcgcgctcgtccgcgtcttc 319 ||||||||| | |||||||| |||||| ||||||||||||| | ||||||||||||| || Sbjct: 15774 ctcaccatgatccacatggcgttctgcgcctccctcgccgtggtgctcgtccgcgtcctc 15715 Query: 320 cgcgtcgtcg 329 |||||||||| Sbjct: 15714 cgcgtcgtcg 15705
>ref|XM_463210.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1110 Score = 170 bits (86), Expect = 3e-39 Identities = 113/122 (92%) Strand = Plus / Plus Query: 373 ctccgtcctccccatcggcgcgctctactccctctccctctggttctccaactccgcata 432 ||||||| | |||||||||| ||||||| | || || ||||||||||||||||||||||| Sbjct: 687 ctccgtcgtgcccatcggcgtgctctacgcgctgtcgctctggttctccaactccgcata 746 Query: 433 catctacctctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtcta 492 |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 747 catctacctctctgtctccttcatccagatgctcaaggcgctcatgcccgtcaccgtcta 806 Query: 493 ct 494 || Sbjct: 807 ct 808 Score = 103 bits (52), Expect = 6e-19 Identities = 106/124 (85%) Strand = Plus / Plus Query: 206 tacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctccctcacc 265 |||||||||||||||||| | |||| ||||||||||||||| |||||| | || |||||| Sbjct: 520 tacaacaagtacatcctcaatcccacgatgtacaactggccattccccgtatcgctcacc 579 Query: 266 atggtgcacatggccttctgctcctccctcgccgtcgcgctcgtccgcgtcttccgcgtc 325 ||||| |||| ||| || ||| |||||||| | || | |||| |||||||| |||||||| Sbjct: 580 atggtccacacggcgttttgcgcctccctcactgtggtgctcatccgcgtcctccgcgtc 639 Query: 326 gtcg 329 |||| Sbjct: 640 gtcg 643
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 170 bits (86), Expect = 3e-39 Identities = 113/122 (92%) Strand = Plus / Plus Query: 373 ctccgtcctccccatcggcgcgctctactccctctccctctggttctccaactccgcata 432 ||||||| | |||||||||| ||||||| | || || ||||||||||||||||||||||| Sbjct: 23444508 ctccgtcgtgcccatcggcgtgctctacgcgctgtcgctctggttctccaactccgcata 23444567 Query: 433 catctacctctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtcta 492 |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 23444568 catctacctctctgtctccttcatccagatgctcaaggcgctcatgcccgtcaccgtcta 23444627 Query: 493 ct 494 || Sbjct: 23444628 ct 23444629 Score = 125 bits (63), Expect = 2e-25 Identities = 81/87 (93%) Strand = Plus / Plus Query: 410 ctctggttctccaactccgcatacatctacctctccgtctccttcatccagatgctcaag 469 ||||||||||||||||| |||||||| |||||||| |||||||||||| ||||||||||| Sbjct: 10616491 ctctggttctccaactctgcatacatatacctctctgtctccttcatctagatgctcaag 10616550 Query: 470 gcgctcatgcccgtcgccgtctactcc 496 || ||||||||||||||||||||||| Sbjct: 10616551 gcattcatgcccgtcgccgtctactcc 10616577 Score = 103 bits (52), Expect = 6e-19 Identities = 106/124 (85%) Strand = Plus / Plus Query: 206 tacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctccctcacc 265 |||||||||||||||||| | |||| ||||||||||||||| |||||| | || |||||| Sbjct: 23444341 tacaacaagtacatcctcaatcccacgatgtacaactggccattccccgtatcgctcacc 23444400 Query: 266 atggtgcacatggccttctgctcctccctcgccgtcgcgctcgtccgcgtcttccgcgtc 325 ||||| |||| ||| || ||| |||||||| | || | |||| |||||||| |||||||| Sbjct: 23444401 atggtccacacggcgttttgcgcctccctcactgtggtgctcatccgcgtcctccgcgtc 23444460 Query: 326 gtcg 329 |||| Sbjct: 23444461 gtcg 23444464 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 469 ggcgctcatgcccgtcgccgtctactcc 496 |||||| ||||| ||||||||||||||| Sbjct: 7768840 ggcgcttatgcctgtcgccgtctactcc 7768867 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 93 tggcgaaggaggccggcggcgagggggc 120 |||||| |||||||||||||| |||||| Sbjct: 4477373 tggcgacggaggccggcggcgtgggggc 4477400
>gb|AC092780.6| Oryza sativa chromosome 3 BAC OSJNBb0079B16 genomic sequence, complete sequence Length = 144383 Score = 170 bits (86), Expect = 3e-39 Identities = 113/122 (92%) Strand = Plus / Minus Query: 373 ctccgtcctccccatcggcgcgctctactccctctccctctggttctccaactccgcata 432 ||||||| | |||||||||| ||||||| | || || ||||||||||||||||||||||| Sbjct: 137749 ctccgtcgtgcccatcggcgtgctctacgcgctgtcgctctggttctccaactccgcata 137690 Query: 433 catctacctctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtcta 492 |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 137689 catctacctctctgtctccttcatccagatgctcaaggcgctcatgcccgtcaccgtcta 137630 Query: 493 ct 494 || Sbjct: 137629 ct 137628 Score = 103 bits (52), Expect = 6e-19 Identities = 106/124 (85%) Strand = Plus / Minus Query: 206 tacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctccctcacc 265 |||||||||||||||||| | |||| ||||||||||||||| |||||| | || |||||| Sbjct: 137916 tacaacaagtacatcctcaatcccacgatgtacaactggccattccccgtatcgctcacc 137857 Query: 266 atggtgcacatggccttctgctcctccctcgccgtcgcgctcgtccgcgtcttccgcgtc 325 ||||| |||| ||| || ||| |||||||| | || | |||| |||||||| |||||||| Sbjct: 137856 atggtccacacggcgttttgcgcctccctcactgtggtgctcatccgcgtcctccgcgtc 137797 Query: 326 gtcg 329 |||| Sbjct: 137796 gtcg 137793
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 170 bits (86), Expect = 3e-39 Identities = 113/122 (92%) Strand = Plus / Plus Query: 373 ctccgtcctccccatcggcgcgctctactccctctccctctggttctccaactccgcata 432 ||||||| | |||||||||| ||||||| | || || ||||||||||||||||||||||| Sbjct: 23437536 ctccgtcgtgcccatcggcgtgctctacgcgctgtcgctctggttctccaactccgcata 23437595 Query: 433 catctacctctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtcta 492 |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 23437596 catctacctctctgtctccttcatccagatgctcaaggcgctcatgcccgtcaccgtcta 23437655 Query: 493 ct 494 || Sbjct: 23437656 ct 23437657 Score = 125 bits (63), Expect = 2e-25 Identities = 81/87 (93%) Strand = Plus / Plus Query: 410 ctctggttctccaactccgcatacatctacctctccgtctccttcatccagatgctcaag 469 ||||||||||||||||| |||||||| |||||||| |||||||||||| ||||||||||| Sbjct: 10614592 ctctggttctccaactctgcatacatatacctctctgtctccttcatctagatgctcaag 10614651 Query: 470 gcgctcatgcccgtcgccgtctactcc 496 || ||||||||||||||||||||||| Sbjct: 10614652 gcattcatgcccgtcgccgtctactcc 10614678 Score = 103 bits (52), Expect = 6e-19 Identities = 106/124 (85%) Strand = Plus / Plus Query: 206 tacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctccctcacc 265 |||||||||||||||||| | |||| ||||||||||||||| |||||| | || |||||| Sbjct: 23437369 tacaacaagtacatcctcaatcccacgatgtacaactggccattccccgtatcgctcacc 23437428 Query: 266 atggtgcacatggccttctgctcctccctcgccgtcgcgctcgtccgcgtcttccgcgtc 325 ||||| |||| ||| || ||| |||||||| | || | |||| |||||||| |||||||| Sbjct: 23437429 atggtccacacggcgttttgcgcctccctcactgtggtgctcatccgcgtcctccgcgtc 23437488 Query: 326 gtcg 329 |||| Sbjct: 23437489 gtcg 23437492 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 469 ggcgctcatgcccgtcgccgtctactcc 496 |||||| ||||| ||||||||||||||| Sbjct: 7766675 ggcgcttatgcctgtcgccgtctactcc 7766702 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 93 tggcgaaggaggccggcggcgagggggc 120 |||||| |||||||||||||| |||||| Sbjct: 4477488 tggcgacggaggccggcggcgtgggggc 4477515
>gb|AC097280.8| Oryza sativa chromosome 3 BAC OSJNBb0111B07 genomic sequence, complete sequence Length = 129647 Score = 170 bits (86), Expect = 3e-39 Identities = 113/122 (92%) Strand = Plus / Plus Query: 373 ctccgtcctccccatcggcgcgctctactccctctccctctggttctccaactccgcata 432 ||||||| | |||||||||| ||||||| | || || ||||||||||||||||||||||| Sbjct: 127164 ctccgtcgtgcccatcggcgtgctctacgcgctgtcgctctggttctccaactccgcata 127223 Query: 433 catctacctctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtcta 492 |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 127224 catctacctctctgtctccttcatccagatgctcaaggcgctcatgcccgtcaccgtcta 127283 Query: 493 ct 494 || Sbjct: 127284 ct 127285 Score = 103 bits (52), Expect = 6e-19 Identities = 106/124 (85%) Strand = Plus / Plus Query: 206 tacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctccctcacc 265 |||||||||||||||||| | |||| ||||||||||||||| |||||| | || |||||| Sbjct: 126997 tacaacaagtacatcctcaatcccacgatgtacaactggccattccccgtatcgctcacc 127056 Query: 266 atggtgcacatggccttctgctcctccctcgccgtcgcgctcgtccgcgtcttccgcgtc 325 ||||| |||| ||| || ||| |||||||| | || | |||| |||||||| |||||||| Sbjct: 127057 atggtccacacggcgttttgcgcctccctcactgtggtgctcatccgcgtcctccgcgtc 127116 Query: 326 gtcg 329 |||| Sbjct: 127117 gtcg 127120
>gb|AC087182.12| Oryza sativa chromosome 10 BAC OSJNBa0029C15 genomic sequence, complete sequence Length = 148816 Score = 165 bits (83), Expect = 2e-37 Identities = 114/123 (92%), Gaps = 1/123 (0%) Strand = Plus / Minus Query: 373 ctccgtcctccccatcgg-cgcgctctactccctctccctctggttctccaactccgcat 431 ||||||| | |||||||| || ||||||| | || || |||||||||||||||||||||| Sbjct: 44480 ctccgtcgtgcccatcgggcgtgctctacgcgctgtcgctctggttctccaactccgcat 44421 Query: 432 acatctacctctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtct 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 44420 acatctacctctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgtcgtct 44361 Query: 492 act 494 ||| Sbjct: 44360 act 44358 Score = 119 bits (60), Expect = 9e-24 Identities = 108/124 (87%) Strand = Plus / Minus Query: 206 tacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctccctcacc 265 |||||||||||||||||||| |||| ||||||||||||||| |||||||| || |||||| Sbjct: 44647 tacaacaagtacatcctcgatcccacgatgtacaactggccattccccatatcgctcacc 44588 Query: 266 atggtgcacatggccttctgctcctccctcgccgtcgcgctcgtccgcgtcttccgcgtc 325 ||||| ||||||| || ||| | |||||||| || | ||||||||||||| ||||||| Sbjct: 44587 atggtccacatggtgttttgcgcttccctcgctgtggtgctcgtccgcgtcctccgcgtt 44528 Query: 326 gtcg 329 |||| Sbjct: 44527 gtcg 44524
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 165 bits (83), Expect = 2e-37 Identities = 114/123 (92%), Gaps = 1/123 (0%) Strand = Plus / Plus Query: 373 ctccgtcctccccatcgg-cgcgctctactccctctccctctggttctccaactccgcat 431 ||||||| | |||||||| || ||||||| | || || |||||||||||||||||||||| Sbjct: 17887561 ctccgtcgtgcccatcgggcgtgctctacgcgctgtcgctctggttctccaactccgcat 17887620 Query: 432 acatctacctctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtct 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 17887621 acatctacctctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgtcgtct 17887680 Query: 492 act 494 ||| Sbjct: 17887681 act 17887683 Score = 119 bits (60), Expect = 9e-24 Identities = 108/124 (87%) Strand = Plus / Plus Query: 206 tacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctccctcacc 265 |||||||||||||||||||| |||| ||||||||||||||| |||||||| || |||||| Sbjct: 17887394 tacaacaagtacatcctcgatcccacgatgtacaactggccattccccatatcgctcacc 17887453 Query: 266 atggtgcacatggccttctgctcctccctcgccgtcgcgctcgtccgcgtcttccgcgtc 325 ||||| ||||||| || ||| | |||||||| || | ||||||||||||| ||||||| Sbjct: 17887454 atggtccacatggtgttttgcgcttccctcgctgtggtgctcgtccgcgtcctccgcgtt 17887513 Query: 326 gtcg 329 |||| Sbjct: 17887514 gtcg 17887517 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 gaaggaggccggcggcgagg 116 |||||||||||||||||||| Sbjct: 12988385 gaaggaggccggcggcgagg 12988404
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 165 bits (83), Expect = 2e-37 Identities = 114/123 (92%), Gaps = 1/123 (0%) Strand = Plus / Plus Query: 373 ctccgtcctccccatcgg-cgcgctctactccctctccctctggttctccaactccgcat 431 ||||||| | |||||||| || ||||||| | || || |||||||||||||||||||||| Sbjct: 17896814 ctccgtcgtgcccatcgggcgtgctctacgcgctgtcgctctggttctccaactccgcat 17896873 Query: 432 acatctacctctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtct 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 17896874 acatctacctctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgtcgtct 17896933 Query: 492 act 494 ||| Sbjct: 17896934 act 17896936 Score = 119 bits (60), Expect = 9e-24 Identities = 108/124 (87%) Strand = Plus / Plus Query: 206 tacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctccctcacc 265 |||||||||||||||||||| |||| ||||||||||||||| |||||||| || |||||| Sbjct: 17896647 tacaacaagtacatcctcgatcccacgatgtacaactggccattccccatatcgctcacc 17896706 Query: 266 atggtgcacatggccttctgctcctccctcgccgtcgcgctcgtccgcgtcttccgcgtc 325 ||||| ||||||| || ||| | |||||||| || | ||||||||||||| ||||||| Sbjct: 17896707 atggtccacatggtgttttgcgcttccctcgctgtggtgctcgtccgcgtcctccgcgtt 17896766 Query: 326 gtcg 329 |||| Sbjct: 17896767 gtcg 17896770 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 gaaggaggccggcggcgagg 116 |||||||||||||||||||| Sbjct: 12995725 gaaggaggccggcggcgagg 12995744
>gb|AC137267.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0032G21, from chromosome 3, complete sequence Length = 187621 Score = 125 bits (63), Expect = 2e-25 Identities = 81/87 (93%) Strand = Plus / Plus Query: 410 ctctggttctccaactccgcatacatctacctctccgtctccttcatccagatgctcaag 469 ||||||||||||||||| |||||||| |||||||| |||||||||||| ||||||||||| Sbjct: 33405 ctctggttctccaactctgcatacatatacctctctgtctccttcatctagatgctcaag 33464 Query: 470 gcgctcatgcccgtcgccgtctactcc 496 || ||||||||||||||||||||||| Sbjct: 33465 gcattcatgcccgtcgccgtctactcc 33491
>ref|NM_119391.1| Arabidopsis thaliana organic anion transporter AT4G32390 mRNA, complete cds Length = 1053 Score = 121 bits (61), Expect = 2e-24 Identities = 127/149 (85%) Strand = Plus / Plus Query: 153 tctcctactgctacgtcgcggtgtggatcttcctctccttcaccgtcatcgtctacaaca 212 |||||||| |||||||||| | ||||||||||| ||||||||||||||||||||||| Sbjct: 50 tctcctacacctacgtcgcgatctggatcttcctgagcttcaccgtcatcgtctacaaca 109 Query: 213 agtacatcctcgaccccaagatgtacaactggcccttccccatctccctcaccatggtgc 272 | |||||||||||| ||||||||||| ||||| || || ||| | ||||||||| | | Sbjct: 110 aatacatcctcgacaagaagatgtacaattggccttttccgatcacactcaccatgatcc 169 Query: 273 acatggccttctgctcctccctcgccgtc 301 ||||||| || ||||| |||||||||||| Sbjct: 170 acatggctttttgctcttccctcgccgtc 198 Score = 89.7 bits (45), Expect = 8e-15 Identities = 102/121 (84%) Strand = Plus / Plus Query: 381 tccccatcggcgcgctctactccctctccctctggttctccaactccgcatacatctacc 440 |||| ||||| || || ||||| || || |||||| ||||||| ||||| ||||| |||| Sbjct: 269 tcccgatcggtgctctgtactcgctttctctctggctctccaattccgcttacatttacc 328 Query: 441 tctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtctactccatcg 500 |||||||||||||||| ||||||||||| || || ||||| ||||| || ||||| |||| Sbjct: 329 tctccgtctccttcattcagatgctcaaagctctaatgcctgtcgctgtttactcaatcg 388 Query: 501 g 501 | Sbjct: 389 g 389
>emb|AL161581.2|ATCHRIV77 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 77 Length = 197252 Score = 121 bits (61), Expect = 2e-24 Identities = 127/149 (85%) Strand = Plus / Plus Query: 153 tctcctactgctacgtcgcggtgtggatcttcctctccttcaccgtcatcgtctacaaca 212 |||||||| |||||||||| | ||||||||||| ||||||||||||||||||||||| Sbjct: 50608 tctcctacacctacgtcgcgatctggatcttcctgagcttcaccgtcatcgtctacaaca 50667 Query: 213 agtacatcctcgaccccaagatgtacaactggcccttccccatctccctcaccatggtgc 272 | |||||||||||| ||||||||||| ||||| || || ||| | ||||||||| | | Sbjct: 50668 aatacatcctcgacaagaagatgtacaattggccttttccgatcacactcaccatgatcc 50727 Query: 273 acatggccttctgctcctccctcgccgtc 301 ||||||| || ||||| |||||||||||| Sbjct: 50728 acatggctttttgctcttccctcgccgtc 50756 Score = 89.7 bits (45), Expect = 8e-15 Identities = 102/121 (84%) Strand = Plus / Plus Query: 381 tccccatcggcgcgctctactccctctccctctggttctccaactccgcatacatctacc 440 |||| ||||| || || ||||| || || |||||| ||||||| ||||| ||||| |||| Sbjct: 50827 tcccgatcggtgctctgtactcgctttctctctggctctccaattccgcttacatttacc 50886 Query: 441 tctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtctactccatcg 500 |||||||||||||||| ||||||||||| || || ||||| ||||| || ||||| |||| Sbjct: 50887 tctccgtctccttcattcagatgctcaaagctctaatgcctgtcgctgtttactcaatcg 50946 Query: 501 g 501 | Sbjct: 50947 g 50947
>emb|AL034567.1|ATF8B4 Arabidopsis thaliana DNA chromosome 4, BAC clone F8B4 (ESSA project) Length = 93257 Score = 121 bits (61), Expect = 2e-24 Identities = 127/149 (85%) Strand = Plus / Plus Query: 153 tctcctactgctacgtcgcggtgtggatcttcctctccttcaccgtcatcgtctacaaca 212 |||||||| |||||||||| | ||||||||||| ||||||||||||||||||||||| Sbjct: 36891 tctcctacacctacgtcgcgatctggatcttcctgagcttcaccgtcatcgtctacaaca 36950 Query: 213 agtacatcctcgaccccaagatgtacaactggcccttccccatctccctcaccatggtgc 272 | |||||||||||| ||||||||||| ||||| || || ||| | ||||||||| | | Sbjct: 36951 aatacatcctcgacaagaagatgtacaattggccttttccgatcacactcaccatgatcc 37010 Query: 273 acatggccttctgctcctccctcgccgtc 301 ||||||| || ||||| |||||||||||| Sbjct: 37011 acatggctttttgctcttccctcgccgtc 37039 Score = 89.7 bits (45), Expect = 8e-15 Identities = 102/121 (84%) Strand = Plus / Plus Query: 381 tccccatcggcgcgctctactccctctccctctggttctccaactccgcatacatctacc 440 |||| ||||| || || ||||| || || |||||| ||||||| ||||| ||||| |||| Sbjct: 37110 tcccgatcggtgctctgtactcgctttctctctggctctccaattccgcttacatttacc 37169 Query: 441 tctccgtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtctactccatcg 500 |||||||||||||||| ||||||||||| || || ||||| ||||| || ||||| |||| Sbjct: 37170 tctccgtctccttcattcagatgctcaaagctctaatgcctgtcgctgtttactcaatcg 37229 Query: 501 g 501 | Sbjct: 37230 g 37230
>ref|NM_197083.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0029C15.18), mRNA Length = 1005 Score = 119 bits (60), Expect = 9e-24 Identities = 108/124 (87%) Strand = Plus / Plus Query: 206 tacaacaagtacatcctcgaccccaagatgtacaactggcccttccccatctccctcacc 265 |||||||||||||||||||| |||| ||||||||||||||| |||||||| || |||||| Sbjct: 358 tacaacaagtacatcctcgatcccacgatgtacaactggccattccccatatcgctcacc 417 Query: 266 atggtgcacatggccttctgctcctccctcgccgtcgcgctcgtccgcgtcttccgcgtc 325 ||||| ||||||| || ||| | |||||||| || | ||||||||||||| ||||||| Sbjct: 418 atggtccacatggtgttttgcgcttccctcgctgtggtgctcgtccgcgtcctccgcgtt 477 Query: 326 gtcg 329 |||| Sbjct: 478 gtcg 481 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 469 ggcgctcatgcccgtcgccgtctact 494 ||||||||||||||||| |||||||| Sbjct: 567 ggcgctcatgcccgtcgtcgtctact 592
>dbj|AB190773.1| Mesembryanthemum crystallinum PTL1 mRNA for plastidic phosphate translocator-like protein1, complete cds Length = 1661 Score = 91.7 bits (46), Expect = 2e-15 Identities = 76/86 (88%) Strand = Plus / Plus Query: 167 gtcgcggtgtggatcttcctctccttcaccgtcatcgtctacaacaagtacatcctcgac 226 |||||| | |||||||||||| |||||| |||||||| |||||||||||||||||||| Sbjct: 242 gtcgcgatatggatcttcctcagcttcactgtcatcgtttacaacaagtacatcctcgat 301 Query: 227 cccaagatgtacaactggcccttccc 252 | ||||||||||| ||||||||||| Sbjct: 302 cgtaagatgtacaattggcccttccc 327
>ref|NM_122449.1| Arabidopsis thaliana organic anion transporter AT5G25400 mRNA, complete cds Length = 1050 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Plus Query: 176 tggatcttcctctccttcaccgtcatcgtctacaacaagtacatcctcgaccccaagatg 235 ||||||||||| |||||||||||||||||||||||| || ||||||||| |||||| Sbjct: 73 tggatcttcctaagcttcaccgtcatcgtctacaacaaatatatcctcgacaagaagatg 132 Query: 236 tacaactggcccttccccatctccctcaccatggtgcacatggccttctgctc 288 ||| | ||||| ||||| ||||| ||||| ||| | |||||| |||| ||||| Sbjct: 133 tacgattggccattcccgatctcactcacaatgatccacatgtccttttgctc 185 Score = 73.8 bits (37), Expect = 5e-10 Identities = 91/109 (83%) Strand = Plus / Plus Query: 404 ctctccctctggttctccaactccgcatacatctacctctccgtctccttcatccagatg 463 ||||| || ||| |||| ||||| || ||||| |||||||| ||||||||||| |||||| Sbjct: 292 ctctctctttggctctctaactcagcctacatttacctctcggtctccttcattcagatg 351 Query: 464 ctcaaggcgctcatgcccgtcgccgtctactccatcggggtgctcttca 512 ||||| ||| | ||||| |||||||| || || || || |||||||||| Sbjct: 352 ctcaaagcgttaatgccagtcgccgtttattcaattggcgtgctcttca 400
>gb|AC006258.1| Arabidopsis thaliana BAC F18G18 from chromosome V near 60.5 cM, complete sequence Length = 110469 Score = 81.8 bits (41), Expect = 2e-12 Identities = 95/113 (84%) Strand = Plus / Plus Query: 176 tggatcttcctctccttcaccgtcatcgtctacaacaagtacatcctcgaccccaagatg 235 ||||||||||| |||||||||||||||||||||||| || ||||||||| |||||| Sbjct: 65424 tggatcttcctaagcttcaccgtcatcgtctacaacaaatatatcctcgacaagaagatg 65483 Query: 236 tacaactggcccttccccatctccctcaccatggtgcacatggccttctgctc 288 ||| | ||||| ||||| ||||| ||||| ||| | |||||| |||| ||||| Sbjct: 65484 tacgattggccattcccgatctcactcacaatgatccacatgtccttttgctc 65536 Score = 73.8 bits (37), Expect = 5e-10 Identities = 91/109 (83%) Strand = Plus / Plus Query: 404 ctctccctctggttctccaactccgcatacatctacctctccgtctccttcatccagatg 463 ||||| || ||| |||| ||||| || ||||| |||||||| ||||||||||| |||||| Sbjct: 65643 ctctctctttggctctctaactcagcctacatttacctctcggtctccttcattcagatg 65702 Query: 464 ctcaaggcgctcatgcccgtcgccgtctactccatcggggtgctcttca 512 ||||| ||| | ||||| |||||||| || || || || |||||||||| Sbjct: 65703 ctcaaagcgttaatgccagtcgccgtttattcaattggcgtgctcttca 65751
>ref|NM_128109.2| Arabidopsis thaliana organic anion transporter AT2G25520 mRNA, complete cds Length = 1530 Score = 77.8 bits (39), Expect = 3e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 176 tggatcttcctctccttcaccgtcatcgtctacaacaagtacatcctcgaccccaagatg 235 |||||||||||| |||||| ||||||||||||||||| |||||||||||| |||||| Sbjct: 195 tggatcttcctcagcttcacagtcatcgtctacaacaaatacatcctcgacaagaagatg 254 Query: 236 tacaactggcccttccccatctccctcaccatggtgcacatgg 278 || || ||||| ||||| || | ||||||||| | ||||||| Sbjct: 255 tataattggccattcccaataactctcaccatgatccacatgg 297 Score = 69.9 bits (35), Expect = 8e-09 Identities = 98/119 (82%) Strand = Plus / Plus Query: 386 atcggcgcgctctactccctctccctctggttctccaactccgcatacatctacctctcc 445 ||||||||| | ||||| || || |||||||| || ||||| || |||||||||||||| Sbjct: 396 atcggcgcgttgtactcactttctctctggttatcaaactctgcttacatctacctctct 455 Query: 446 gtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtctactccatcggggt 504 || |||||||| || |||||||| || || ||||| || || || ||||| |||||||| Sbjct: 456 gtttccttcattcaaatgctcaaagccctaatgcctgtagcagtttactcaatcggggt 514
>gb|AY056179.1| Arabidopsis thaliana putative phosphate/phosphoenolpyruvate translocator protein (At2g25520) mRNA, complete cds Length = 1547 Score = 77.8 bits (39), Expect = 3e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 176 tggatcttcctctccttcaccgtcatcgtctacaacaagtacatcctcgaccccaagatg 235 |||||||||||| |||||| ||||||||||||||||| |||||||||||| |||||| Sbjct: 195 tggatcttcctcagcttcacagtcatcgtctacaacaaatacatcctcgacaagaagatg 254 Query: 236 tacaactggcccttccccatctccctcaccatggtgcacatgg 278 || || ||||| ||||| || | ||||||||| | ||||||| Sbjct: 255 tataattggccattcccaataactctcaccatgatccacatgg 297 Score = 69.9 bits (35), Expect = 8e-09 Identities = 98/119 (82%) Strand = Plus / Plus Query: 386 atcggcgcgctctactccctctccctctggttctccaactccgcatacatctacctctcc 445 ||||||||| | ||||| || || |||||||| || ||||| || |||||||||||||| Sbjct: 396 atcggcgcgttgtactcactttctctctggttatcaaactctgcttacatctacctctct 455 Query: 446 gtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtctactccatcggggt 504 || |||||||| || |||||||| || || ||||| || || || ||||| |||||||| Sbjct: 456 gtttccttcattcaaatgctcaaagccctaatgcctgtagcagtttactcaatcggggt 514
>gb|AC006300.4| Arabidopsis thaliana chromosome 2 clone F13B15 map mi238, complete sequence Length = 88770 Score = 77.8 bits (39), Expect = 3e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 176 tggatcttcctctccttcaccgtcatcgtctacaacaagtacatcctcgaccccaagatg 235 |||||||||||| |||||| ||||||||||||||||| |||||||||||| |||||| Sbjct: 60238 tggatcttcctcagcttcacagtcatcgtctacaacaaatacatcctcgacaagaagatg 60297 Query: 236 tacaactggcccttccccatctccctcaccatggtgcacatgg 278 || || ||||| ||||| || | ||||||||| | ||||||| Sbjct: 60298 tataattggccattcccaataactctcaccatgatccacatgg 60340 Score = 69.9 bits (35), Expect = 8e-09 Identities = 98/119 (82%) Strand = Plus / Plus Query: 386 atcggcgcgctctactccctctccctctggttctccaactccgcatacatctacctctcc 445 ||||||||| | ||||| || || |||||||| || ||||| || |||||||||||||| Sbjct: 60439 atcggcgcgttgtactcactttctctctggttatcaaactctgcttacatctacctctct 60498 Query: 446 gtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtctactccatcggggt 504 || |||||||| || |||||||| || || ||||| || || || ||||| |||||||| Sbjct: 60499 gtttccttcattcaaatgctcaaagccctaatgcctgtagcagtttactcaatcggggt 60557
>gb|AY054267.1| Arabidopsis thaliana At2g25520/F13B15.18 mRNA, complete cds Length = 1489 Score = 77.8 bits (39), Expect = 3e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 176 tggatcttcctctccttcaccgtcatcgtctacaacaagtacatcctcgaccccaagatg 235 |||||||||||| |||||| ||||||||||||||||| |||||||||||| |||||| Sbjct: 195 tggatcttcctcagcttcacagtcatcgtctacaacaaatacatcctcgacaagaagatg 254 Query: 236 tacaactggcccttccccatctccctcaccatggtgcacatgg 278 || || ||||| ||||| || | ||||||||| | ||||||| Sbjct: 255 tataattggccattcccaataactctcaccatgatccacatgg 297 Score = 69.9 bits (35), Expect = 8e-09 Identities = 98/119 (82%) Strand = Plus / Plus Query: 386 atcggcgcgctctactccctctccctctggttctccaactccgcatacatctacctctcc 445 ||||||||| | ||||| || || |||||||| || ||||| || |||||||||||||| Sbjct: 396 atcggcgcgttgtactcactttctctctggttatcaaactctgcttacatctacctctct 455 Query: 446 gtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtctactccatcggggt 504 || |||||||| || |||||||| || || ||||| || || || ||||| |||||||| Sbjct: 456 gtttccttcattcaaatgctcaaagccctaatgcctgtagcagtttactcaatcggggt 514
>gb|BT002645.1| Arabidopsis thaliana At2g25520/F13B15.18 gene, complete cds Length = 1044 Score = 77.8 bits (39), Expect = 3e-11 Identities = 87/103 (84%) Strand = Plus / Plus Query: 176 tggatcttcctctccttcaccgtcatcgtctacaacaagtacatcctcgaccccaagatg 235 |||||||||||| |||||| ||||||||||||||||| |||||||||||| |||||| Sbjct: 73 tggatcttcctcagcttcacagtcatcgtctacaacaaatacatcctcgacaagaagatg 132 Query: 236 tacaactggcccttccccatctccctcaccatggtgcacatgg 278 || || ||||| ||||| || | ||||||||| | ||||||| Sbjct: 133 tataattggccattcccaataactctcaccatgatccacatgg 175 Score = 69.9 bits (35), Expect = 8e-09 Identities = 98/119 (82%) Strand = Plus / Plus Query: 386 atcggcgcgctctactccctctccctctggttctccaactccgcatacatctacctctcc 445 ||||||||| | ||||| || || |||||||| || ||||| || |||||||||||||| Sbjct: 274 atcggcgcgttgtactcactttctctctggttatcaaactctgcttacatctacctctct 333 Query: 446 gtctccttcatccagatgctcaaggcgctcatgcccgtcgccgtctactccatcggggt 504 || |||||||| || |||||||| || || ||||| || || || ||||| |||||||| Sbjct: 334 gtttccttcattcaaatgctcaaagccctaatgcctgtagcagtttactcaatcggggt 392
>gb|AY616052.1| Prototheca wickerhamii putative phosphate/phosphoenolpyruvate translocator protein-like mRNA, partial sequence Length = 635 Score = 73.8 bits (37), Expect = 5e-10 Identities = 40/41 (97%) Strand = Plus / Plus Query: 449 tccttcatccagatgctcaaggcgctcatgcccgtcgccgt 489 ||||||||||||||||||||||||||||||||||| ||||| Sbjct: 383 tccttcatccagatgctcaaggcgctcatgcccgtggccgt 423
>ref|NM_121161.1| Arabidopsis thaliana organic anion transporter AT5G11230 mRNA, complete cds Length = 1056 Score = 67.9 bits (34), Expect = 3e-08 Identities = 106/130 (81%) Strand = Plus / Plus Query: 153 tctcctactgctacgtcgcggtgtggatcttcctctccttcaccgtcatcgtctacaaca 212 |||| ||| ||||||| ||| | ||||||||| | |||||| || || |||||||||| Sbjct: 50 tctcatacagctacgtagcgatatggatcttcttaagcttcacagtaattgtctacaaca 109 Query: 213 agtacatcctcgaccccaagatgtacaactggcccttccccatctccctcaccatggtgc 272 | |||||||||||| ||||||||||| ||||| ||||| ||||| ||||| ||| | | Sbjct: 110 aatacatcctcgacaagaagatgtacaattggccattcccgatctcactcacaatgatcc 169 Query: 273 acatggcctt 282 ||||| |||| Sbjct: 170 acatgtcctt 179 Score = 60.0 bits (30), Expect = 7e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 404 ctctccctctggttctccaactccgcatacatctacctctccgtctccttcatccagatg 463 ||||| |||||||| || || ||||| ||||| ||||| || |||||||| ||||||||| Sbjct: 292 ctctcactctggttatcgaattccgcttacatttacctatcagtctcctttatccagatg 351 Query: 464 ctcaaggcgctcatgcccgtcgccgtctactccatcgg 501 || || || |||||||| || || || ||||| ||||| Sbjct: 352 cttaaagctctcatgcctgtagctgtttactcaatcgg 389
>emb|AL360314.1|ATF2I11 Arabidopsis thaliana DNA chromosome 5, BAC clone F2I11 (ESSA project) Length = 110992 Score = 67.9 bits (34), Expect = 3e-08 Identities = 106/130 (81%) Strand = Plus / Plus Query: 153 tctcctactgctacgtcgcggtgtggatcttcctctccttcaccgtcatcgtctacaaca 212 |||| ||| ||||||| ||| | ||||||||| | |||||| || || |||||||||| Sbjct: 43372 tctcatacagctacgtagcgatatggatcttcttaagcttcacagtaattgtctacaaca 43431 Query: 213 agtacatcctcgaccccaagatgtacaactggcccttccccatctccctcaccatggtgc 272 | |||||||||||| ||||||||||| ||||| ||||| ||||| ||||| ||| | | Sbjct: 43432 aatacatcctcgacaagaagatgtacaattggccattcccgatctcactcacaatgatcc 43491 Query: 273 acatggcctt 282 ||||| |||| Sbjct: 43492 acatgtcctt 43501 Score = 60.0 bits (30), Expect = 7e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 404 ctctccctctggttctccaactccgcatacatctacctctccgtctccttcatccagatg 463 ||||| |||||||| || || ||||| ||||| ||||| || |||||||| ||||||||| Sbjct: 43614 ctctcactctggttatcgaattccgcttacatttacctatcagtctcctttatccagatg 43673 Query: 464 ctcaaggcgctcatgcccgtcgccgtctactccatcgg 501 || || || |||||||| || || || ||||| ||||| Sbjct: 43674 cttaaagctctcatgcctgtagctgtttactcaatcgg 43711
>ref|XM_950751.1| Neurospora crassa OR74A hypothetical protein (NCU01456.1) partial mRNA Length = 1257 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Plus Query: 435 tctacctctccgtctccttcatccagatgctcaaggc 471 |||||||| |||| |||||||||||||||||||||| Sbjct: 335 tctacctcagcgtcgccttcatccagatgctcaaggc 371
>ref|XM_327894.1| Neurospora crassa OR74A hypothetical protein (NCU01456.1) partial mRNA Length = 1257 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Plus Query: 435 tctacctctccgtctccttcatccagatgctcaaggc 471 |||||||| |||| |||||||||||||||||||||| Sbjct: 335 tctacctcagcgtcgccttcatccagatgctcaaggc 371
>gb|BT013372.1| Lycopersicon esculentum clone 135397F, mRNA sequence Length = 1426 Score = 50.1 bits (25), Expect = 0.007 Identities = 49/57 (85%) Strand = Plus / Plus Query: 176 tggatcttcctctccttcaccgtcatcgtctacaacaagtacatcctcgaccccaag 232 |||||||||||||| ||||| ||||| || |||||||| ||||| || |||| |||| Sbjct: 154 tggatcttcctctctttcactgtcattgtttacaacaaatacattcttgaccgcaag 210
>emb|BX294022.1|NCB11C21 Neurospora crassa DNA linkage group V BAC clone B11C21 Length = 62209 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Plus Query: 435 tctacctctccgtctccttcatccagatgctcaaggc 471 |||||||| |||| |||||||||||||||||||||| Sbjct: 30990 tctacctcagcgtcgccttcatccagatgctcaaggc 31026
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 309 tccgcgtcttccgcgtcgtcgac 331 ||||||||||||||||||||||| Sbjct: 2590007 tccgcgtcttccgcgtcgtcgac 2590029
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 309 tccgcgtcttccgcgtcgtcgac 331 ||||||||||||||||||||||| Sbjct: 770049 tccgcgtcttccgcgtcgtcgac 770071
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 309 tccgcgtcttccgcgtcgtcgac 331 ||||||||||||||||||||||| Sbjct: 500832 tccgcgtcttccgcgtcgtcgac 500854
>ref|XM_742045.1| Aspergillus fumigatus Af293 integral membrane protein (Afu8g00670) partial mRNA Length = 765 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 447 tctccttcatccagatgctcaaggcg 472 ||||||| |||||||||||||||||| Sbjct: 326 tctcctttatccagatgctcaaggcg 351
>gb|AC150787.15| Medicago truncatula clone mth2-171n13, complete sequence Length = 82665 Score = 44.1 bits (22), Expect = 0.44 Identities = 70/86 (81%) Strand = Plus / Plus Query: 176 tggatcttcctctccttcaccgtcatcgtctacaacaagtacatcctcgaccccaagatg 235 ||||||||| | || ||||| || ||||| |||||||| |||||| | ||| |||||| Sbjct: 34224 tggatcttcttatcattcactgttatcgtttacaacaaatacatcttagacaaaaagatg 34283 Query: 236 tacaactggcccttccccatctccct 261 ||||| ||||| ||||| || ||||| Sbjct: 34284 tacaattggccattcccaatttccct 34309
>ref|XM_754251.1| Ustilago maydis 521 hypothetical protein (UM03197.1) partial mRNA Length = 1056 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 451 cttcatccagatgctcaaggc 471 ||||||||||||||||||||| Sbjct: 471 cttcatccagatgctcaaggc 491
>ref|XM_386174.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG05998.1) partial mRNA Length = 1230 Score = 42.1 bits (21), Expect = 1.8 Identities = 33/37 (89%) Strand = Plus / Plus Query: 435 tctacctctccgtctccttcatccagatgctcaaggc 471 |||||||||| ||| | ||||| |||||||||||||| Sbjct: 404 tctacctctcggtcgctttcattcagatgctcaaggc 440
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 148 gctcgtctcctactgctacgtcgcg 172 ||||||||||||| ||||||||||| Sbjct: 3244844 gctcgtctcctaccgctacgtcgcg 3244868
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 449 tccttcatccagatgctcaag 469 ||||||||||||||||||||| Sbjct: 16221037 tccttcatccagatgctcaag 16221017
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 ctgctcctccctcgccgtcgc 303 ||||||||||||||||||||| Sbjct: 17742940 ctgctcctccctcgccgtcgc 17742920
>gb|AF293449.1|AF293449 Canis familiaris BPAG1-like gene sequence Length = 8190 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 398 tactccctctccctctggttctccaactc 426 ||||||||| |||||||||||||| |||| Sbjct: 1135 tactccctcgccctctggttctcccactc 1107
>dbj|AP005399.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0676H02 Length = 144252 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 283 ctgctcctccctcgccgtcgc 303 ||||||||||||||||||||| Sbjct: 51574 ctgctcctccctcgccgtcgc 51554
>emb|AL606729.3|OSJN00107 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0062B06, complete sequence Length = 187154 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 449 tccttcatccagatgctcaag 469 ||||||||||||||||||||| Sbjct: 65952 tccttcatccagatgctcaag 65932
>ref|NM_196376.1| Oryza sativa (japonica cultivar-group) putative selenium-binding protein-like (OSJNBa0050N08.17), mRNA Length = 1956 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 gaaggaggccggcggcgagg 116 |||||||||||||||||||| Sbjct: 118 gaaggaggccggcggcgagg 99
>gb|BT017565.1| Zea mays clone EL01N0425H11.c mRNA sequence Length = 922 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 cggagtcggtgctccgcaag 145 |||||||||||||||||||| Sbjct: 27 cggagtcggtgctccgcaag 46
>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence Length = 1130447 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 438 acctctccgtctccttcatc 457 |||||||||||||||||||| Sbjct: 968203 acctctccgtctccttcatc 968222
>gb|AC021891.6| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0050N08, complete sequence Length = 144593 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 gaaggaggccggcggcgagg 116 |||||||||||||||||||| Sbjct: 87301 gaaggaggccggcggcgagg 87320
>ref|XM_362482.1| Magnaporthe grisea 70-15 hypothetical protein (MG08065.4) partial mRNA Length = 1455 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 ccgccatgaccacgcagctc 364 |||||||||||||||||||| Sbjct: 1085 ccgccatgaccacgcagctc 1066
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 247 cttccccatctccctcacca 266 |||||||||||||||||||| Sbjct: 877221 cttccccatctccctcacca 877240
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 tcgcccgccatgaccacgca 360 |||||||||||||||||||| Sbjct: 1629394 tcgcccgccatgaccacgca 1629413
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 310 ccgcgtcttccgcgtcgtcgacct 333 |||||||||||||| ||||||||| Sbjct: 1214093 ccgcgtcttccgcgccgtcgacct 1214070
>ref|XM_843094.1| Leishmania major strain Friedlin hypothetical protein (LMJ_0492) partial mRNA Length = 2160 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 438 acctctccgtctccttcatc 457 |||||||||||||||||||| Sbjct: 1702 acctctccgtctccttcatc 1683
>emb|CR812477.10| Human DNA sequence from clone XXyac-25IG7 on chromosome 1, complete sequence Length = 31273 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 246 ccttccccatctccctcaccatgg 269 ||||||||||||||||| |||||| Sbjct: 28117 ccttccccatctccctcgccatgg 28140
>emb|AL672032.6| Human DNA sequence from clone RP11-308B5 on chromosome X Contains a novel gene, the 5' end of the PLAC1 gene for placenta-specific 1, a ribosomal protein L21 (RPL21) pseudogene, a ribosomal protein S7 (RPS7) pseudogene and the 3' end of the LOC169090 gene, complete sequence Length = 209317 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 272 cacatggccttctgctcctccctc 295 |||||||||||||||| ||||||| Sbjct: 170868 cacatggccttctgcttctccctc 170845
>gb|AY597275.1| Pseudomonas viridiflava strain ME3.1b pathogenicity island PAI-Region-1, complete sequence Length = 40359 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 ccagatgctcaaggcgctca 476 |||||||||||||||||||| Sbjct: 15407 ccagatgctcaaggcgctca 15388
>ref|XM_504157.1| Yarrowia lipolytica CLIB122, YALI0E19679g predicted mRNA Length = 1278 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 305 ctcgtccgcgtcttccgcgtcgtc 328 |||||||||||| ||||||||||| Sbjct: 144 ctcgtccgcgtcgtccgcgtcgtc 167
>emb|AL020993.1|HS5O6 Human DNA sequence from clone RP1-5O6 on chromosome 22q12, complete sequence Length = 106008 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 439 cctctccgtctccttcatcc 458 |||||||||||||||||||| Sbjct: 3572 cctctccgtctccttcatcc 3553
>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29 Length = 313800 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 tcaccgtcatcgtctacaac 211 |||||||||||||||||||| Sbjct: 232298 tcaccgtcatcgtctacaac 232317
>dbj|AP007154.1| Aspergillus oryzae RIB40 genomic DNA, SC001 Length = 2005935 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 ctgctcctccctcgccgtcg 302 |||||||||||||||||||| Sbjct: 977598 ctgctcctccctcgccgtcg 977579
>gb|AC125471.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0042J17, complete sequence Length = 171442 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 93 tggcgaaggaggccggcggcgagggggc 120 |||||| |||||||||||||| |||||| Sbjct: 82665 tggcgacggaggccggcggcgtgggggc 82692
>dbj|AP003412.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1150F11 Length = 130355 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 91 catggcgaaggaggccggcggcgagggg 118 ||||| ||||||||||| |||||||||| Sbjct: 17749 catggggaaggaggccgtcggcgagggg 17722
>dbj|AP003269.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0504E02 Length = 137468 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 91 catggcgaaggaggccggcggcgagggg 118 ||||| ||||||||||| |||||||||| Sbjct: 97889 catggggaaggaggccgtcggcgagggg 97862
>dbj|BA000013.4| Mesorhizobium loti MAFF303099 pMLa DNA, cpmplete genome Length = 351911 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 gccatgaccacgcagctcta 366 |||||||||||||||||||| Sbjct: 267180 gccatgaccacgcagctcta 267199
>dbj|AK073733.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033059B18, full insert sequence Length = 2240 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 91 catggcgaaggaggccggcggcgagggg 118 ||||| ||||||||||| |||||||||| Sbjct: 220 catggggaaggaggccgtcggcgagggg 247
>gb|AY109992.1| Zea mays CL9168_1 mRNA sequence Length = 1226 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 126 cggagtcggtgctccgcaag 145 |||||||||||||||||||| Sbjct: 1159 cggagtcggtgctccgcaag 1140
>gb|AY105378.1| Zea mays PCO101520 mRNA sequence Length = 500 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 cggagtcggtgctccgcaag 145 |||||||||||||||||||| Sbjct: 96 cggagtcggtgctccgcaag 115
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 ctcgccgtcgcgctcgtccg 312 |||||||||||||||||||| Sbjct: 2348893 ctcgccgtcgcgctcgtccg 2348912
>gb|AC118672.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0078P24, from chromosome 3, complete sequence Length = 146930 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 469 ggcgctcatgcccgtcgccgtctactcc 496 |||||| ||||| ||||||||||||||| Sbjct: 83954 ggcgcttatgcctgtcgccgtctactcc 83927
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 305 ctcgtccgcgtcttccgcgtcgtc 328 |||||||||||| ||||||||||| Sbjct: 2348145 ctcgtccgcgtcgtccgcgtcgtc 2348168 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,666,995 Number of Sequences: 3902068 Number of extensions: 3666995 Number of successful extensions: 175203 Number of sequences better than 10.0: 84 Number of HSP's better than 10.0 without gapping: 93 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 172486 Number of HSP's gapped (non-prelim): 2717 length of query: 512 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 489 effective length of database: 17,143,297,704 effective search space: 8383072577256 effective search space used: 8383072577256 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
