ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd23i08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ST7R_ARATH (Q9LDU6) 7-dehydrocholesterol reductase (EC 1.3.1.21)... 233 4e-61
2DHCR7_MIMIV (Q5UQI4) Probable 7-dehydrocholesterol reductase (EC... 40 0.004
3DHCR7_RAT (Q9Z2Z8) 7-dehydrocholesterol reductase (EC 1.3.1.21) ... 30 4.0
4DHCR7_MOUSE (O88455) 7-dehydrocholesterol reductase (EC 1.3.1.21... 30 4.0
5ERG24_HUMAN (O76062) Delta(14)-sterol reductase (EC 1.3.1.70) (C... 30 4.0

>ST7R_ARATH (Q9LDU6) 7-dehydrocholesterol reductase (EC 1.3.1.21) (7-DHC|
           reductase) (Sterol delta-7-reductase) (Dwarf5 protein)
          Length = 432

 Score =  233 bits (593), Expect = 4e-61
 Identities = 111/176 (63%), Positives = 130/176 (73%)
 Frame = +1

Query: 67  SKTAHSPLLTYASMVTLLSLCPPFVILLWYTMVHADGSVLQIYEHLRDHGILEGLKAIWP 246
           ++T HSP++TYASM++LL+ CPPFVILLWYTMVH DGSV Q +    ++G+ +GL  IWP
Sbjct: 2   AETVHSPIVTYASMLSLLAFCPPFVILLWYTMVHQDGSVTQTFGFFWENGV-QGLINIWP 60

Query: 247 APTLVAGKIIXXXXXXXXXXXXXXPGKRFEGPISPSGNVPVYKANGXXXXXXXXXXXXXX 426
            PTL+A KII              PGKR EGPISP+GN PVYKANG              
Sbjct: 61  RPTLIAWKIIFCYGAFEAILQLLLPGKRVEGPISPAGNRPVYKANGLAAYFVTLATYLGL 120

Query: 427 WWFGIFNPAIVYDHLGEIYSALVFGSLVFCLLLYIKGHVAPSSSDSGSAGNVIIDF 594
           WWFGIFNPAIVYDHLGEI+SAL+FGS +FC+LLYIKGHVAPSSSDSGS GN+IIDF
Sbjct: 121 WWFGIFNPAIVYDHLGEIFSALIFGSFIFCVLLYIKGHVAPSSSDSGSCGNLIIDF 176



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>DHCR7_MIMIV (Q5UQI4) Probable 7-dehydrocholesterol reductase (EC 1.3.1.21)|
           (7-DHC reductase) (Sterol delta-7-reductase)
          Length = 447

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
 Frame = +1

Query: 337 GPISPSGNVPVYKANGXXXXXXXXXXXXXXWWFGIFNPAIVYDHLGEIY-SALVFGSLVF 513
           G I+P+GN+  Y  NG               ++G+F+P I+ D+ G I+ S  + G L+ 
Sbjct: 113 GHITPAGNLVYYNINGLQAFIITHVLVIMSCYYGLFSPTIIMDNWGSIFWSVNIIGYLIT 172

Query: 514 CLLLYIKGHVAPSSSDSGSAGNVIID 591
            L  +     +   SD+   G +  D
Sbjct: 173 FLAYFKALTFSSHPSDNKFTGKLFYD 198



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>DHCR7_RAT (Q9Z2Z8) 7-dehydrocholesterol reductase (EC 1.3.1.21) (7-DHC|
           reductase) (Sterol delta-7-reductase)
          Length = 471

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
 Frame = +1

Query: 334 EGPISPSGNVPVYKANGXXX-XXXXXXXXXXXWWFGIFNPAIVYDH-LGEIYSALVFGSL 507
           EG I+P+G V  Y+ NG               +    F+P I++D+ +  ++ A + G  
Sbjct: 127 EGAITPAGIVNKYEVNGLQAWLITHFLWFVNAYLLSWFSPTIIFDNWIPLLWCANILGYA 186

Query: 508 VFCLLLYIKGHVAPSSS-DSGSAGNVIIDF 594
           V    + IKG++ P+S+ D    GN   ++
Sbjct: 187 VSTFAM-IKGYLFPTSAEDCKFTGNFFYNY 215



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>DHCR7_MOUSE (O88455) 7-dehydrocholesterol reductase (EC 1.3.1.21) (7-DHC|
           reductase) (Sterol delta-7-reductase)
          Length = 471

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
 Frame = +1

Query: 334 EGPISPSGNVPVYKANGXXX-XXXXXXXXXXXWWFGIFNPAIVYDH-LGEIYSALVFGSL 507
           EG I+P+G V  Y+ NG               +    F+P I++D+ +  ++ A + G  
Sbjct: 127 EGAITPAGVVNKYEVNGLQAWLITHILWFVNAYLLSWFSPTIIFDNWIPLLWCANILGYA 186

Query: 508 VFCLLLYIKGHVAPSSS-DSGSAGNVIIDF 594
           V    + IKG++ P+S+ D    GN   ++
Sbjct: 187 VSTFAM-IKGYLFPTSAEDCKFTGNFFYNY 215



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>ERG24_HUMAN (O76062) Delta(14)-sterol reductase (EC 1.3.1.70) (C-14 sterol|
           reductase) (Sterol C14-reductase) (Delta14-SR)
           (Transmembrane 7 superfamily member 2) (Another new gene
           1 protein) (Putative sterol reductase SR-1)
          Length = 418

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
 Frame = +1

Query: 502 SLVFCLLLYIKGHVAPSS--SDSGSAGNVIIDF 594
           + +F L LY+K  VAP S  +  G++GN I DF
Sbjct: 141 AFIFSLFLYMKAQVAPVSALAPGGNSGNPIYDF 173


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,041,981
Number of Sequences: 219361
Number of extensions: 1390902
Number of successful extensions: 3605
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3311
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3604
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5216272880
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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