| Clone Name | basd23i08 |
|---|---|
| Clone Library Name | barley_pub |
>ST7R_ARATH (Q9LDU6) 7-dehydrocholesterol reductase (EC 1.3.1.21) (7-DHC| reductase) (Sterol delta-7-reductase) (Dwarf5 protein) Length = 432 Score = 233 bits (593), Expect = 4e-61 Identities = 111/176 (63%), Positives = 130/176 (73%) Frame = +1 Query: 67 SKTAHSPLLTYASMVTLLSLCPPFVILLWYTMVHADGSVLQIYEHLRDHGILEGLKAIWP 246 ++T HSP++TYASM++LL+ CPPFVILLWYTMVH DGSV Q + ++G+ +GL IWP Sbjct: 2 AETVHSPIVTYASMLSLLAFCPPFVILLWYTMVHQDGSVTQTFGFFWENGV-QGLINIWP 60 Query: 247 APTLVAGKIIXXXXXXXXXXXXXXPGKRFEGPISPSGNVPVYKANGXXXXXXXXXXXXXX 426 PTL+A KII PGKR EGPISP+GN PVYKANG Sbjct: 61 RPTLIAWKIIFCYGAFEAILQLLLPGKRVEGPISPAGNRPVYKANGLAAYFVTLATYLGL 120 Query: 427 WWFGIFNPAIVYDHLGEIYSALVFGSLVFCLLLYIKGHVAPSSSDSGSAGNVIIDF 594 WWFGIFNPAIVYDHLGEI+SAL+FGS +FC+LLYIKGHVAPSSSDSGS GN+IIDF Sbjct: 121 WWFGIFNPAIVYDHLGEIFSALIFGSFIFCVLLYIKGHVAPSSSDSGSCGNLIIDF 176
>DHCR7_MIMIV (Q5UQI4) Probable 7-dehydrocholesterol reductase (EC 1.3.1.21)| (7-DHC reductase) (Sterol delta-7-reductase) Length = 447 Score = 40.4 bits (93), Expect = 0.004 Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 1/86 (1%) Frame = +1 Query: 337 GPISPSGNVPVYKANGXXXXXXXXXXXXXXWWFGIFNPAIVYDHLGEIY-SALVFGSLVF 513 G I+P+GN+ Y NG ++G+F+P I+ D+ G I+ S + G L+ Sbjct: 113 GHITPAGNLVYYNINGLQAFIITHVLVIMSCYYGLFSPTIIMDNWGSIFWSVNIIGYLIT 172 Query: 514 CLLLYIKGHVAPSSSDSGSAGNVIID 591 L + + SD+ G + D Sbjct: 173 FLAYFKALTFSSHPSDNKFTGKLFYD 198
>DHCR7_RAT (Q9Z2Z8) 7-dehydrocholesterol reductase (EC 1.3.1.21) (7-DHC| reductase) (Sterol delta-7-reductase) Length = 471 Score = 30.4 bits (67), Expect = 4.0 Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 3/90 (3%) Frame = +1 Query: 334 EGPISPSGNVPVYKANGXXX-XXXXXXXXXXXWWFGIFNPAIVYDH-LGEIYSALVFGSL 507 EG I+P+G V Y+ NG + F+P I++D+ + ++ A + G Sbjct: 127 EGAITPAGIVNKYEVNGLQAWLITHFLWFVNAYLLSWFSPTIIFDNWIPLLWCANILGYA 186 Query: 508 VFCLLLYIKGHVAPSSS-DSGSAGNVIIDF 594 V + IKG++ P+S+ D GN ++ Sbjct: 187 VSTFAM-IKGYLFPTSAEDCKFTGNFFYNY 215
>DHCR7_MOUSE (O88455) 7-dehydrocholesterol reductase (EC 1.3.1.21) (7-DHC| reductase) (Sterol delta-7-reductase) Length = 471 Score = 30.4 bits (67), Expect = 4.0 Identities = 24/90 (26%), Positives = 43/90 (47%), Gaps = 3/90 (3%) Frame = +1 Query: 334 EGPISPSGNVPVYKANGXXX-XXXXXXXXXXXWWFGIFNPAIVYDH-LGEIYSALVFGSL 507 EG I+P+G V Y+ NG + F+P I++D+ + ++ A + G Sbjct: 127 EGAITPAGVVNKYEVNGLQAWLITHILWFVNAYLLSWFSPTIIFDNWIPLLWCANILGYA 186 Query: 508 VFCLLLYIKGHVAPSSS-DSGSAGNVIIDF 594 V + IKG++ P+S+ D GN ++ Sbjct: 187 VSTFAM-IKGYLFPTSAEDCKFTGNFFYNY 215
>ERG24_HUMAN (O76062) Delta(14)-sterol reductase (EC 1.3.1.70) (C-14 sterol| reductase) (Sterol C14-reductase) (Delta14-SR) (Transmembrane 7 superfamily member 2) (Another new gene 1 protein) (Putative sterol reductase SR-1) Length = 418 Score = 30.4 bits (67), Expect = 4.0 Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 2/33 (6%) Frame = +1 Query: 502 SLVFCLLLYIKGHVAPSS--SDSGSAGNVIIDF 594 + +F L LY+K VAP S + G++GN I DF Sbjct: 141 AFIFSLFLYMKAQVAPVSALAPGGNSGNPIYDF 173 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 69,041,981 Number of Sequences: 219361 Number of extensions: 1390902 Number of successful extensions: 3605 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 3311 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3604 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5216272880 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)