>RL4_CLOPE (Q8XHS4) 50S ribosomal protein L4|
          Length = 204

 Score = 33.5 bits (75), Expect = 0.48
 Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
 Frame = +2

Query: 320 QGKLTFPQWIKGGEAMAPVVAPTGGTV--LVRKLATLSPKELFVGDIVLLKD 469
           QG +  PQWIKGG   AP       ++   +RK+A  S     V D+V+L+D
Sbjct: 75  QGSIRAPQWIKGGVVFAPKPRDYRMSIPKSMRKVAMTSALTSKVADMVVLED 126

>STP9_ARATH (Q9SX48) Sugar transport protein 9 (Hexose transporter 9)|
          Length = 517

 Score = 32.7 bits (73), Expect = 0.81
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -1

Query: 336 KVSLPWKKLFQMASVISVLLICPTVYFFQE 247
           KV  PWK +FQ A     L+ C  + FFQ+
Sbjct: 268 KVDNPWKNIFQQAKYRPALVFCSAIPFFQQ 297

>BCOR_MOUSE (Q8CGN4) BCoR protein (BCL-6 corepressor)|
          Length = 1759

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -1

Query: 375 TGAMASPPLIHCGKVSLPWK 316
           + + A PPL+HC   SLPWK
Sbjct: 271 SASAAIPPLVHCSDKSLPWK 290

>E74EB_DROME (P11536) Ecdysone-induced protein 74EF isoform B (ETS-related|
           protein E74B)
          Length = 883

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 20/54 (37%), Positives = 28/54 (51%)
 Frame = -1

Query: 513 TAASRRTIKSSDFSGSFNKTMSPTKSSFGDKVASFLTRTVPPVGATTGAMASPP 352
           +++S  +  SS  S S + + S   S+    VAS +T T PP  A   A ASPP
Sbjct: 29  SSSSSSSSSSSSLSLSSSSSSSSLSSATPTPVASPVTPTSPPPAAAAPAEASPP 82

>BCOR_HUMAN (Q6W2J9) BCoR protein (BCL-6 corepressor)|
          Length = 1755

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = -1

Query: 363 ASPPLIHCGKVSLPWK 316
           A PPL+HC   SLPWK
Sbjct: 275 AIPPLVHCADKSLPWK 290

>YB95_SCHPO (O42970) Hypothetical serine-rich protein C1E8.05 precursor|
          Length = 317

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 16/52 (30%), Positives = 30/52 (57%)
 Frame = -1

Query: 513 TAASRRTIKSSDFSGSFNKTMSPTKSSFGDKVASFLTRTVPPVGATTGAMAS 358
           +++S ++  SS  S   + + S +KSS     +SF+T T P   +++GA+ S
Sbjct: 192 SSSSSKSSSSSSSSSKSSASPSSSKSSSKFSSSSFITSTTPASSSSSGAIVS 243

>PACC_NEUCR (Q7RVQ8) pH-response transcription factor pacC/RIM101|
          Length = 621

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 18/56 (32%), Positives = 25/56 (44%)
 Frame = -1

Query: 519 PCTAASRRTIKSSDFSGSFNKTMSPTKSSFGDKVASFLTRTVPPVGATTGAMASPP 352
           P TAA+  T  ++  +G+    M P  SS     AS  T   P    TT + +S P
Sbjct: 32  PATAATPTTAPAASANGTAANAMKPEASSNSSNSASNGTTPAPSTTPTTASNSSAP 87

>KGUA_STRP8 (P65223) Guanylate kinase (EC 2.7.4.8) (GMP kinase)|
          Length = 211

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 14/49 (28%), Positives = 27/49 (55%)
 Frame = +2

Query: 221 HKFEYSISLSWKKYTVGQINSTEMTDAIWKSFFQGKLTFPQWIKGGEAM 367
           HKFEYS+S++ +    G+++  +        FF+ +  F + IK G+ +
Sbjct: 31  HKFEYSVSMTTRPQRPGEVDGVDY-------FFRTREEFEELIKTGQML 72

>KGUA_STRP6 (Q5XAP1) Guanylate kinase (EC 2.7.4.8) (GMP kinase)|
          Length = 211

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 14/49 (28%), Positives = 27/49 (55%)
 Frame = +2

Query: 221 HKFEYSISLSWKKYTVGQINSTEMTDAIWKSFFQGKLTFPQWIKGGEAM 367
           HKFEYS+S++ +    G+++  +        FF+ +  F + IK G+ +
Sbjct: 31  HKFEYSVSMTTRPQRPGEVDGVDY-------FFRTREEFEELIKTGQML 72

>KGUA_STRP3 (P65222) Guanylate kinase (EC 2.7.4.8) (GMP kinase)|
          Length = 211

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 14/49 (28%), Positives = 27/49 (55%)
 Frame = +2

Query: 221 HKFEYSISLSWKKYTVGQINSTEMTDAIWKSFFQGKLTFPQWIKGGEAM 367
           HKFEYS+S++ +    G+++  +        FF+ +  F + IK G+ +
Sbjct: 31  HKFEYSVSMTTRPQRPGEVDGVDY-------FFRTREEFEELIKTGQML 72

>KGUA_STRP1 (Q99YM5) Guanylate kinase (EC 2.7.4.8) (GMP kinase)|
          Length = 211

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 14/49 (28%), Positives = 27/49 (55%)
 Frame = +2

Query: 221 HKFEYSISLSWKKYTVGQINSTEMTDAIWKSFFQGKLTFPQWIKGGEAM 367
           HKFEYS+S++ +    G+++  +        FF+ +  F + IK G+ +
Sbjct: 31  HKFEYSVSMTTRPQRPGEVDGVDY-------FFRTREEFEELIKTGQML 72

>KGUA_STRMU (Q8DVK6) Guanylate kinase (EC 2.7.4.8) (GMP kinase)|
          Length = 210

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 14/49 (28%), Positives = 28/49 (57%)
 Frame = +2

Query: 221 HKFEYSISLSWKKYTVGQINSTEMTDAIWKSFFQGKLTFPQWIKGGEAM 367
           H+FEYS+S++ +   +G+I+  +        FF+ +  F + IK G+ +
Sbjct: 31  HQFEYSVSMTTRPQRLGEIDGVDY-------FFRTREEFEELIKQGQML 72

>COAT_BPGA (P07234) Coat protein|
          Length = 129

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
 Frame = +2

Query: 161 LQRATRSRMVSLSTWFRYA-AHKFEYSISLSWKKYTVGQINSTEMTDAIWKSFFQGKLTF 337
           L   +RS+   ++  +R + A K +Y+I L   K     +N  E+  + WK++    LT 
Sbjct: 32  LSNNSRSQAYRVTASYRASGADKRKYAIKLEVPKIVTQVVNGVELPGSAWKAYASIDLTI 91

Query: 338 P 340
           P
Sbjct: 92  P 92

>ABTB2_RAT (O08764) Ankyrin repeat and BTB/POZ domain-containing protein 2|
           (Confluent 3Y1 cell-associated protein) (CCA3)
          Length = 1009

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 17/49 (34%), Positives = 22/49 (44%)
 Frame = +1

Query: 277 QQH*DDRCHLEELLPGQAHLPAVDQRGRSHGPCRCSHRRNRPRQKARYF 423
           QQ   D   LEE+L           +G S GP R S  R +  Q+A Y+
Sbjct: 673 QQAKADVLSLEEILAEGVEESDTSSQGSSEGPVRLSRTRTKALQEAMYY 721

>ABTB2_MOUSE (Q7TQI7) Ankyrin repeat and BTB/POZ domain-containing protein 2|
          Length = 1024

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 17/49 (34%), Positives = 22/49 (44%)
 Frame = +1

Query: 277 QQH*DDRCHLEELLPGQAHLPAVDQRGRSHGPCRCSHRRNRPRQKARYF 423
           QQ   D   LEE+L           +G S GP R S  R +  Q+A Y+
Sbjct: 674 QQAKADVLSLEEILAEGVEESDTSSQGSSEGPVRLSRTRTKALQEAMYY 722

>HNFAA_XENLA (Q05041) Hepatocyte nuclear factor 1-alpha A (HNF-1A-A)|
           (HNF-1-alpha A) (LFB1) (XLFB1A)
          Length = 605

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -2

Query: 560 QRAHPSHQ*RPSHSLARQPVAGQLNHRISLGP 465
           Q+ HPSHQ  PSH   +QP+  Q+   ++  P
Sbjct: 444 QQLHPSHQLHPSH---QQPIVQQVQSHMAQNP 472

>ESPL1_MOUSE (P60330) Separin (EC 3.4.22.49) (Separase) (Caspase-like protein|
            ESPL1) (Extra spindle poles-like 1 protein)
          Length = 2118

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 26/97 (26%), Positives = 41/97 (42%), Gaps = 10/97 (10%)
 Frame = +2

Query: 323  GKLTFPQWIKGGEAMAPVVAPTGGTVLVRKLATLSPKELFVGDIVLLKDPEKSDDLIVRR 502
            G   FPQ  K        + P+G TV V  LATL P  L   + +LL   EK +  I  +
Sbjct: 1679 GSGCFPQAEKESFQERLALIPSGVTVCVLALATLQPGTL--SNTLLLTRLEKDNPPITVK 1736

Query: 503  L----------AAVQGYEMVSTDEKDEPFVLDKDECW 583
            +          A ++ ++ +  D+K+     +K   W
Sbjct: 1737 IPTAQNKLPLSAVLKEFDAIQKDQKENSSCTEKRVWW 1773


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,047,479
Number of Sequences: 219361
Number of extensions: 1373842
Number of successful extensions: 4380
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 4228
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4374
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5196311029
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)