| Clone Name | basd23g07 |
|---|---|
| Clone Library Name | barley_pub |
>KPYC_SOLTU (P22200) Pyruvate kinase, cytosolic isozyme (EC 2.7.1.40) (PK)| Length = 510 Score = 70.1 bits (170), Expect = 3e-12 Identities = 36/46 (78%), Positives = 39/46 (84%) Frame = +2 Query: 2 DSESTEEILQAALKSAVKKQLCKAGDAVVVLHRIGVASVIKICTVQ 139 DSESTE IL+AALKSAV + LCK GDAVV LHRIG ASVIKIC V+ Sbjct: 465 DSESTEVILEAALKSAVTRGLCKPGDAVVALHRIGSASVIKICVVK 510
>KPYC_SOYBN (Q42806) Pyruvate kinase, cytosolic isozyme (EC 2.7.1.40) (PK)| Length = 511 Score = 68.9 bits (167), Expect = 7e-12 Identities = 34/46 (73%), Positives = 39/46 (84%) Frame = +2 Query: 2 DSESTEEILQAALKSAVKKQLCKAGDAVVVLHRIGVASVIKICTVQ 139 D+ESTE IL+AALKSA ++ LCK GDAVV LHRIG ASVIKIC V+ Sbjct: 466 DAESTEVILEAALKSATERALCKPGDAVVALHRIGAASVIKICIVK 511
>KPYC_TOBAC (Q42954) Pyruvate kinase, cytosolic isozyme (EC 2.7.1.40) (PK)| Length = 508 Score = 56.6 bits (135), Expect = 4e-08 Identities = 29/44 (65%), Positives = 33/44 (75%) Frame = +2 Query: 8 ESTEEILQAALKSAVKKQLCKAGDAVVVLHRIGVASVIKICTVQ 139 ESTEE L AL+ A K LCK GD+VV LHR+G ASVIKI TV+ Sbjct: 465 ESTEEALDFALQHAKTKGLCKQGDSVVALHRVGTASVIKIVTVK 508
>KPYC_ARATH (O65595) Probable pyruvate kinase, cytosolic isozyme (EC 2.7.1.40)| (PK) Length = 497 Score = 50.1 bits (118), Expect = 3e-06 Identities = 27/44 (61%), Positives = 31/44 (70%) Frame = +2 Query: 8 ESTEEILQAALKSAVKKQLCKAGDAVVVLHRIGVASVIKICTVQ 139 ESTEE L+ A + KKQLCK GD+VV L R G A VIKI TV+ Sbjct: 454 ESTEETLEFASEYGKKKQLCKTGDSVVALFRTGNAIVIKILTVK 497
>BCOR_HUMAN (Q6W2J9) BCoR protein (BCL-6 corepressor)| Length = 1755 Score = 31.6 bits (70), Expect = 1.2 Identities = 16/45 (35%), Positives = 24/45 (53%) Frame = -1 Query: 156 MPGGHHWTVQILMTEATPMRCRTTTASPALQSCFFTADLSAAWRI 22 +P H+ I + A+PMR T +ASPA+ AD S W++ Sbjct: 247 LPPPHYVGPHIPSSLASPMRLSTPSASPAIPPLVHCADKSLPWKM 291
>NGL1_HUMAN (Q9HCJ2) Netrin-G1 ligand precursor (NGL-1) (Leucine-rich| repeat-containing protein 4C) Length = 640 Score = 30.4 bits (67), Expect = 2.7 Identities = 16/54 (29%), Positives = 23/54 (42%) Frame = +3 Query: 168 HPGPCCRGETWVLWKQVDIVPSVAVCCIDPIRAGKLGGRGLRYIELFYYRWYAP 329 +P C W+ W D+ PS CC L GR + ++ Y+ YAP Sbjct: 301 NPWNCNCDILWLSWWIKDMAPSNTACCARCNTPPNLKGRYIGELDQNYFTCYAP 354
>NGL1_MOUSE (Q8C031) Netrin-G1 ligand precursor (NGL-1) (Leucine-rich| repeat-containing protein 4C) Length = 640 Score = 30.0 bits (66), Expect = 3.6 Identities = 16/54 (29%), Positives = 23/54 (42%) Frame = +3 Query: 168 HPGPCCRGETWVLWKQVDIVPSVAVCCIDPIRAGKLGGRGLRYIELFYYRWYAP 329 +P C W+ W D+ PS CC L GR + ++ Y+ YAP Sbjct: 301 NPWNCNCDILWLSWWIRDMAPSNTACCARCNTPPNLKGRYIGELDQNYFTCYAP 354
>SYN1_RAT (P09951) Synapsin-1 (Synapsin I)| Length = 704 Score = 29.3 bits (64), Expect = 6.1 Identities = 16/40 (40%), Positives = 20/40 (50%) Frame = -3 Query: 289 SPLPPNLPARIGSMQQTATDGTISTCFHKTQVSPRQQGPG 170 SPLP LP+ + QQ+A+ T T Q P GPG Sbjct: 500 SPLPQRLPSPTAAPQQSASQATPMTQGQGRQSRPVAGGPG 539
>CCR5_ATEGE (Q95NC4) C-C chemokine receptor type 5 (C-C CKR-5) (CC-CKR-5)| (CCR-5) (CCR5) (CD195 antigen) Length = 352 Score = 29.3 bits (64), Expect = 6.1 Identities = 13/43 (30%), Positives = 22/43 (51%) Frame = +3 Query: 243 CCIDPIRAGKLGGRGLRYIELFYYRWYAPCSMVCGRCHACTIF 371 CC++PI +G + Y+ +F+ + A C C C+IF Sbjct: 290 CCVNPIIYAFVGEKFRNYLLVFFQKHIAKCF-----CECCSIF 327
>LRC4B_HUMAN (Q9NT99) Leucine-rich repeat-containing protein 4B precursor| Length = 713 Score = 28.9 bits (63), Expect = 7.9 Identities = 15/54 (27%), Positives = 23/54 (42%) Frame = +3 Query: 168 HPGPCCRGETWVLWKQVDIVPSVAVCCIDPIRAGKLGGRGLRYIELFYYRWYAP 329 +P C W+ W + VPS CC L GR + ++ ++ YAP Sbjct: 311 NPWHCNCDVLWLSWWLKETVPSNTTCCARCHAPAGLKGRYIGELDQSHFTCYAP 364
>TIG_WOLPM (Q73I58) Trigger factor (TF)| Length = 444 Score = 28.9 bits (63), Expect = 7.9 Identities = 13/36 (36%), Positives = 24/36 (66%) Frame = -3 Query: 466 ILLLPHVSTDITTKRVLQSSEYNKQQQQLIREKIVQ 359 +++ +VS D+ RVL+ E NKQ Q+L+R + ++ Sbjct: 379 VIVNQYVSKDVQFDRVLKHFESNKQFQELVRGQALE 414
>TFEB_HUMAN (P19484) Transcription factor EB| Length = 476 Score = 28.9 bits (63), Expect = 7.9 Identities = 13/28 (46%), Positives = 18/28 (64%) Frame = -2 Query: 221 INLFPQDPGFATAARTGVLGSPCPADIT 138 +N++ DP TA+ GV S CPAD+T Sbjct: 191 LNVYSSDPQ-VTASLVGVTSSSCPADLT 217
>BCOR_MOUSE (Q8CGN4) BCoR protein (BCL-6 corepressor)| Length = 1759 Score = 28.9 bits (63), Expect = 7.9 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 5/57 (8%) Frame = -1 Query: 156 MPGGHHWTVQILMTEATPMRCRTTTASPALQSCFFTADLSAAWRI-----SSVDSES 1 +P H+ I + A+PMR T +AS A+ +D S W++ + VDS S Sbjct: 247 LPPPHYVNPHIPSSLASPMRLSTPSASAAIPPLVHCSDKSLPWKMGVNPGNPVDSHS 303
>LRC4B_MOUSE (P0C192) Leucine-rich repeat-containing protein 4B precursor| Length = 709 Score = 28.9 bits (63), Expect = 7.9 Identities = 15/54 (27%), Positives = 23/54 (42%) Frame = +3 Query: 168 HPGPCCRGETWVLWKQVDIVPSVAVCCIDPIRAGKLGGRGLRYIELFYYRWYAP 329 +P C W+ W + VPS CC L GR + ++ ++ YAP Sbjct: 313 NPWHCNCDVLWLSWWLKETVPSNTTCCARCHAPAGLKGRYIGELDQSHFTCYAP 366
>SYN1_MOUSE (O88935) Synapsin-1 (Synapsin I)| Length = 706 Score = 28.9 bits (63), Expect = 7.9 Identities = 16/40 (40%), Positives = 20/40 (50%) Frame = -3 Query: 289 SPLPPNLPARIGSMQQTATDGTISTCFHKTQVSPRQQGPG 170 SPLP LP+ + QQ+A+ T T Q P GPG Sbjct: 502 SPLPQRLPSPTAAPQQSASQATPVTQGQGRQSRPVAGGPG 541 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 70,333,089 Number of Sequences: 219361 Number of extensions: 1361624 Number of successful extensions: 3729 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 3624 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3729 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3523384522 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)