| Clone Name | basd23f09 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_506295.1| PREDICTED Oryza sativa (japonica cultivar-group), P0443H10.4 mRNA Length = 1940 Score = 83.8 bits (42), Expect = 6e-13 Identities = 217/276 (78%), Gaps = 12/276 (4%) Strand = Plus / Plus Query: 309 ttgtagatggagaggataaccaccaacccgttctacacttctgggatcccagtaactgtg 368 ||||| |||||||| |||| |||||| | | |||||| |||||| || || || |||||| Sbjct: 190 ttgtaaatggagagaataagcaccaatcagctctacaattctggaattccggtgactgtg 249 Query: 369 ccatcacctctgccttc------agccgccatggatgaaagctttcccaggctgccagat 422 ||||| ||||||||| | ||| || ||||||||| | |||||||| | |||||| Sbjct: 250 ccatcgcctctgcctgctataccagctaccctggatgaaaacattcccaggattccagat 309 Query: 423 gcgcagaatgttctgctggagagagaactgagaagaacacctctcccgcctc------at 476 | ||||||||||| || |||||||||| ||||||| |||||| | || |||| || Sbjct: 310 gggcagaatgttccgcgggagagagaattgagaagcacacctatgccacctcatcagaat 369 Query: 477 caaagtgctgttgctcctaccggtgggcagtttcaccccagtactgggtctgtcggcccc 536 || ||| ||||||||||| |||||| ||||| ||||||| |||||||| || || Sbjct: 370 cagagtactgttgctcctcttcatgggcattttcagtccagtaccgggtctgttgggcct 429 Query: 537 ttgcgttcgcccccggctgtaaggttctcttcagtt 572 |||||||| ||| ||| ||||||||||||||||| Sbjct: 430 ctgcgttcgtcccaggcgataaggttctcttcagtt 465
>ref|XM_477827.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1873 Score = 83.8 bits (42), Expect = 6e-13 Identities = 217/276 (78%), Gaps = 12/276 (4%) Strand = Plus / Plus Query: 309 ttgtagatggagaggataaccaccaacccgttctacacttctgggatcccagtaactgtg 368 ||||| |||||||| |||| |||||| | | |||||| |||||| || || || |||||| Sbjct: 208 ttgtaaatggagagaataagcaccaatcagctctacaattctggaattccggtgactgtg 267 Query: 369 ccatcacctctgccttc------agccgccatggatgaaagctttcccaggctgccagat 422 ||||| ||||||||| | ||| || ||||||||| | |||||||| | |||||| Sbjct: 268 ccatcgcctctgcctgctataccagctaccctggatgaaaacattcccaggattccagat 327 Query: 423 gcgcagaatgttctgctggagagagaactgagaagaacacctctcccgcctc------at 476 | ||||||||||| || |||||||||| ||||||| |||||| | || |||| || Sbjct: 328 gggcagaatgttccgcgggagagagaattgagaagcacacctatgccacctcatcagaat 387 Query: 477 caaagtgctgttgctcctaccggtgggcagtttcaccccagtactgggtctgtcggcccc 536 || ||| ||||||||||| |||||| ||||| ||||||| |||||||| || || Sbjct: 388 cagagtactgttgctcctcttcatgggcattttcagtccagtaccgggtctgttgggcct 447 Query: 537 ttgcgttcgcccccggctgtaaggttctcttcagtt 572 |||||||| ||| ||| ||||||||||||||||| Sbjct: 448 ctgcgttcgtcccaggcgataaggttctcttcagtt 483
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 83.8 bits (42), Expect = 6e-13 Identities = 217/276 (78%), Gaps = 12/276 (4%) Strand = Plus / Plus Query: 309 ttgtagatggagaggataaccaccaacccgttctacacttctgggatcccagtaactgtg 368 ||||| |||||||| |||| |||||| | | |||||| |||||| || || || |||||| Sbjct: 14700991 ttgtaaatggagagaataagcaccaatcagctctacaattctggaattccggtgactgtg 14701050 Query: 369 ccatcacctctgccttc------agccgccatggatgaaagctttcccaggctgccagat 422 ||||| ||||||||| | ||| || ||||||||| | |||||||| | |||||| Sbjct: 14701051 ccatcgcctctgcctgctataccagctaccctggatgaaaacattcccaggattccagat 14701110 Query: 423 gcgcagaatgttctgctggagagagaactgagaagaacacctctcccgcctc------at 476 | ||||||||||| || |||||||||| ||||||| |||||| | || |||| || Sbjct: 14701111 gggcagaatgttccgcgggagagagaattgagaagcacacctatgccacctcatcagaat 14701170 Query: 477 caaagtgctgttgctcctaccggtgggcagtttcaccccagtactgggtctgtcggcccc 536 || ||| ||||||||||| |||||| ||||| ||||||| |||||||| || || Sbjct: 14701171 cagagtactgttgctcctcttcatgggcattttcagtccagtaccgggtctgttgggcct 14701230 Query: 537 ttgcgttcgcccccggctgtaaggttctcttcagtt 572 |||||||| ||| ||| ||||||||||||||||| Sbjct: 14701231 ctgcgttcgtcccaggcgataaggttctcttcagtt 14701266 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 7380045 gcgagcagagcaggggaggg 7380064
>dbj|AP005451.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0443H10 Length = 144695 Score = 83.8 bits (42), Expect = 6e-13 Identities = 217/276 (78%), Gaps = 12/276 (4%) Strand = Plus / Plus Query: 309 ttgtagatggagaggataaccaccaacccgttctacacttctgggatcccagtaactgtg 368 ||||| |||||||| |||| |||||| | | |||||| |||||| || || || |||||| Sbjct: 25758 ttgtaaatggagagaataagcaccaatcagctctacaattctggaattccggtgactgtg 25817 Query: 369 ccatcacctctgccttc------agccgccatggatgaaagctttcccaggctgccagat 422 ||||| ||||||||| | ||| || ||||||||| | |||||||| | |||||| Sbjct: 25818 ccatcgcctctgcctgctataccagctaccctggatgaaaacattcccaggattccagat 25877 Query: 423 gcgcagaatgttctgctggagagagaactgagaagaacacctctcccgcctc------at 476 | ||||||||||| || |||||||||| ||||||| |||||| | || |||| || Sbjct: 25878 gggcagaatgttccgcgggagagagaattgagaagcacacctatgccacctcatcagaat 25937 Query: 477 caaagtgctgttgctcctaccggtgggcagtttcaccccagtactgggtctgtcggcccc 536 || ||| ||||||||||| |||||| ||||| ||||||| |||||||| || || Sbjct: 25938 cagagtactgttgctcctcttcatgggcattttcagtccagtaccgggtctgttgggcct 25997 Query: 537 ttgcgttcgcccccggctgtaaggttctcttcagtt 572 |||||||| ||| ||| ||||||||||||||||| Sbjct: 25998 ctgcgttcgtcccaggcgataaggttctcttcagtt 26033
>dbj|AP005101.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0026I22 Length = 143302 Score = 83.8 bits (42), Expect = 6e-13 Identities = 217/276 (78%), Gaps = 12/276 (4%) Strand = Plus / Plus Query: 309 ttgtagatggagaggataaccaccaacccgttctacacttctgggatcccagtaactgtg 368 ||||| |||||||| |||| |||||| | | |||||| |||||| || || || |||||| Sbjct: 93989 ttgtaaatggagagaataagcaccaatcagctctacaattctggaattccggtgactgtg 94048 Query: 369 ccatcacctctgccttc------agccgccatggatgaaagctttcccaggctgccagat 422 ||||| ||||||||| | ||| || ||||||||| | |||||||| | |||||| Sbjct: 94049 ccatcgcctctgcctgctataccagctaccctggatgaaaacattcccaggattccagat 94108 Query: 423 gcgcagaatgttctgctggagagagaactgagaagaacacctctcccgcctc------at 476 | ||||||||||| || |||||||||| ||||||| |||||| | || |||| || Sbjct: 94109 gggcagaatgttccgcgggagagagaattgagaagcacacctatgccacctcatcagaat 94168 Query: 477 caaagtgctgttgctcctaccggtgggcagtttcaccccagtactgggtctgtcggcccc 536 || ||| ||||||||||| |||||| ||||| ||||||| |||||||| || || Sbjct: 94169 cagagtactgttgctcctcttcatgggcattttcagtccagtaccgggtctgttgggcct 94228 Query: 537 ttgcgttcgcccccggctgtaaggttctcttcagtt 572 |||||||| ||| ||| ||||||||||||||||| Sbjct: 94229 ctgcgttcgtcccaggcgataaggttctcttcagtt 94264
>dbj|AK100065.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013160O05, full insert sequence Length = 1941 Score = 83.8 bits (42), Expect = 6e-13 Identities = 217/276 (78%), Gaps = 12/276 (4%) Strand = Plus / Plus Query: 309 ttgtagatggagaggataaccaccaacccgttctacacttctgggatcccagtaactgtg 368 ||||| |||||||| |||| |||||| | | |||||| |||||| || || || |||||| Sbjct: 190 ttgtaaatggagagaataagcaccaatcagctctacaattctggaattccggtgactgtg 249 Query: 369 ccatcacctctgccttc------agccgccatggatgaaagctttcccaggctgccagat 422 ||||| ||||||||| | ||| || ||||||||| | |||||||| | |||||| Sbjct: 250 ccatcgcctctgcctgctataccagctaccctggatgaaaacattcccaggattccagat 309 Query: 423 gcgcagaatgttctgctggagagagaactgagaagaacacctctcccgcctc------at 476 | ||||||||||| || |||||||||| ||||||| |||||| | || |||| || Sbjct: 310 gggcagaatgttccgcgggagagagaattgagaagcacacctatgccacctcatcagaat 369 Query: 477 caaagtgctgttgctcctaccggtgggcagtttcaccccagtactgggtctgtcggcccc 536 || ||| ||||||||||| |||||| ||||| ||||||| |||||||| || || Sbjct: 370 cagagtactgttgctcctcttcatgggcattttcagtccagtaccgggtctgttgggcct 429 Query: 537 ttgcgttcgcccccggctgtaaggttctcttcagtt 572 |||||||| ||| ||| ||||||||||||||||| Sbjct: 430 ctgcgttcgtcccaggcgataaggttctcttcagtt 465
>dbj|AK060412.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-E04, full insert sequence Length = 1873 Score = 83.8 bits (42), Expect = 6e-13 Identities = 217/276 (78%), Gaps = 12/276 (4%) Strand = Plus / Plus Query: 309 ttgtagatggagaggataaccaccaacccgttctacacttctgggatcccagtaactgtg 368 ||||| |||||||| |||| |||||| | | |||||| |||||| || || || |||||| Sbjct: 208 ttgtaaatggagagaataagcaccaatcagctctacaattctggaattccggtgactgtg 267 Query: 369 ccatcacctctgccttc------agccgccatggatgaaagctttcccaggctgccagat 422 ||||| ||||||||| | ||| || ||||||||| | |||||||| | |||||| Sbjct: 268 ccatcgcctctgcctgctatactagctaccctggatgaaaacattcccaggattccagat 327 Query: 423 gcgcagaatgttctgctggagagagaactgagaagaacacctctcccgcctc------at 476 | ||||||||||| || |||||||||| ||||||| |||||| | || |||| || Sbjct: 328 gggcagaatgttccgcgggagagagaattgagaagcacacctatgccacctcatcagaat 387 Query: 477 caaagtgctgttgctcctaccggtgggcagtttcaccccagtactgggtctgtcggcccc 536 || ||| ||||||||||| |||||| ||||| ||||||| |||||||| || || Sbjct: 388 cagagtactgttgctcctcttcatgggcattttcagtccagtaccgggtctgttgggcct 447 Query: 537 ttgcgttcgcccccggctgtaaggttctcttcagtt 572 |||||||| ||| ||| ||||||||||||||||| Sbjct: 448 ctgcgttcgtcccaggcgataaggttctcttcagtt 483
>gb|AY224478.1| Oryza sativa (japonica cultivar-group) isolate 29112 phosphate starvation response regulator-like protein mRNA, complete cds Length = 1086 Score = 79.8 bits (40), Expect = 9e-12 Identities = 212/270 (78%), Gaps = 12/270 (4%) Strand = Plus / Plus Query: 315 atggagaggataaccaccaacccgttctacacttctgggatcccagtaactgtgccatca 374 |||||||| |||| |||||| | | |||||| |||||| || || || ||||||||||| Sbjct: 1 atggagagaataagcaccaatcagctctacaattctggaattccggtgactgtgccatcg 60 Query: 375 cctctgccttc------agccgccatggatgaaagctttcccaggctgccagatgcgcag 428 ||||||||| | ||| || ||||||||| | |||||||| | ||||||| |||| Sbjct: 61 cctctgcctgctataccagctaccctggatgaaaacattcccaggattccagatgggcag 120 Query: 429 aatgttctgctggagagagaactgagaagaacacctctcccgcctc------atcaaagt 482 ||||||| || |||||||||| ||||||| |||||| | || |||| |||| ||| Sbjct: 121 aatgttccgcgggagagagaattgagaagcacacctatgccacctcatcagaatcagagt 180 Query: 483 gctgttgctcctaccggtgggcagtttcaccccagtactgggtctgtcggccccttgcgt 542 ||||||||||| |||||| ||||| ||||||| |||||||| || || ||||| Sbjct: 181 actgttgctcctcttcatgggcattttcagtccagtaccgggtctgttgggcctctgcgt 240 Query: 543 tcgcccccggctgtaaggttctcttcagtt 572 ||| ||| ||| ||||||||||||||||| Sbjct: 241 tcgtcccaggcgataaggttctcttcagtt 270
>dbj|AK103195.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033121P15, full insert sequence Length = 1210 Score = 67.9 bits (34), Expect = 4e-08 Identities = 216/276 (78%), Gaps = 13/276 (4%) Strand = Plus / Plus Query: 309 ttgtagatggagaggataaccaccaacccgttctacacttctgggatcccagtaactgtg 368 ||||| |||||||| |||| |||||| | | |||||| |||||| || || || |||||| Sbjct: 204 ttgtaaatggagagaataagcaccaatcagctctacaattctggaattccggtgactgtg 263 Query: 369 ccatcacctctgccttc------agccgccatggatgaaagctttcccaggctgccagat 422 ||||| ||||||||| | ||| || ||||||||| | |||||||| | |||||| Sbjct: 264 ccatcgcctctgcctgctataccagctaccctggatgaaaacattcccaggattccagat 323 Query: 423 gcgcagaatgttctgctggagagagaactgagaagaacacctctcccgcctc------at 476 | ||||||||||| || || ||||||| ||||||| |||||| | || |||| || Sbjct: 324 gggcagaatgttccgc-ggggagagaattgagaagcacacctatgccacctcatcagaat 382 Query: 477 caaagtgctgttgctcctaccggtgggcagtttcaccccagtactgggtctgtcggcccc 536 || ||| ||||||||||| |||||| ||||| ||||||| |||||||| || || Sbjct: 383 cagagtactgttgctcctcttcatgggcattttcagtccagtaccgggtctgttgggcct 442 Query: 537 ttgcgttcgcccccggctgtaaggttctcttcagtt 572 |||||||| ||| ||| ||||||||||||||||| Sbjct: 443 ctgcgttcgtcccaggcgataaggttctcttcagtt 478
>gb|AY106726.1| Zea mays PCO106271 mRNA sequence Length = 943 Score = 61.9 bits (31), Expect = 2e-06 Identities = 207/266 (77%), Gaps = 6/266 (2%) Strand = Plus / Plus Query: 309 ttgtagatggagaggataaccaccaacccgttctacacttctgggatcccagtaactgtg 368 ||||||||||||||| ||| |||||||| | |||||| |||||| | || ||||| || Sbjct: 248 ttgtagatggagaggttaagcaccaaccagctctacagttctggtgttcctgtaaccgta 307 Query: 369 ccatcacctctgcctt------cagccgccatggatgaaagctttcccaggctgccagat 422 ||| || ||||||||| ||| | | ||||||| ||||| || ||||| || ||| Sbjct: 308 ccaacatctctgccttgtataccagtctctctggatgagagcttcccgaggcttcccgat 367 Query: 423 gcgcagaatgttctgctggagagagaactgagaagaacacctctcccgcctcatcaaagt 482 || |||| |||| || ||||||||||| |||| || || || || || ||||| || | Sbjct: 368 gcacagagtgttttgatggagagagaattgaggagcactccactaccacctcaccagaca 427 Query: 483 gctgttgctcctaccggtgggcagtttcaccccagtactgggtctgtcggccccttgcgt 542 |||||||||||| | |||| | ||||||| ||| |||||| ||||| || || ||| | Sbjct: 428 actgttgctcctatccgtggtctgtttcactccaatactggatctgttggtcctttgtgc 487 Query: 543 tcgcccccggctgtaaggttctcttc 568 || || ||| |||||||||||||||| Sbjct: 488 tcacctccgtctgtaaggttctcttc 513
>ref|XM_482459.1| Oryza sativa (japonica cultivar-group), mRNA Length = 201 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Minus Query: 245 tctcgcgagcagagcaggggaggga 269 ||||||||||||||||||||||||| Sbjct: 90 tctcgcgagcagagcaggggaggga 66
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 245 tctcgcgagcagagcaggggaggga 269 ||||||||||||||||||||||||| Sbjct: 20248241 tctcgcgagcagagcaggggaggga 20248265 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 23554713 gcgagcagagcaggggaggg 23554732 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 19058475 gcgagcagagcaggggaggg 19058456 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 17508704 gcgagcagagcaggggaggg 17508685
>dbj|AP005301.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0077M12 Length = 145337 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 245 tctcgcgagcagagcaggggaggga 269 ||||||||||||||||||||||||| Sbjct: 114027 tctcgcgagcagagcaggggaggga 114051
>emb|AL662948.4|OSJN00150 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060B20, complete sequence Length = 147254 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Minus Query: 245 tctcgcgagcagagcaggggaggg 268 |||||||||||||||||||||||| Sbjct: 66034 tctcgcgagcagagcaggggaggg 66011 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Plus Query: 245 tctcgcgagcagagcaggggaggg 268 |||||||||||||||||||||||| Sbjct: 42412 tctcgcgagcagagcaggggaggg 42435
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Minus Query: 245 tctcgcgagcagagcaggggaggg 268 |||||||||||||||||||||||| Sbjct: 7860337 tctcgcgagcagagcaggggaggg 7860314 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Plus Query: 245 tctcgcgagcagagcaggggaggg 268 |||||||||||||||||||||||| Sbjct: 7836715 tctcgcgagcagagcaggggaggg 7836738
>dbj|AK066074.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013057F06, full insert sequence Length = 3509 Score = 48.1 bits (24), Expect = 0.033 Identities = 24/24 (100%) Strand = Plus / Plus Query: 245 tctcgcgagcagagcaggggaggg 268 |||||||||||||||||||||||| Sbjct: 389 tctcgcgagcagagcaggggaggg 412
>gb|AC113332.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1057_B02, complete sequence Length = 99795 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 246 ctcgcgagcagagcaggggaggg 268 ||||||||||||||||||||||| Sbjct: 12524 ctcgcgagcagagcaggggaggg 12502
>gb|AC130605.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0010D04, complete sequence Length = 122599 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 246 ctcgcgagcagagcaggggaggg 268 ||||||||||||||||||||||| Sbjct: 95641 ctcgcgagcagagcaggggaggg 95619
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 245 tctcgcgagcagagcaggggagg 267 ||||||||||||||||||||||| Sbjct: 4956468 tctcgcgagcagagcaggggagg 4956490 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 250 cgagcagagcaggggagggaa 270 ||||||||||||||||||||| Sbjct: 3221842 cgagcagagcaggggagggaa 3221822 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 26175196 gcgagcagagcaggggaggg 26175177
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 246 ctcgcgagcagagcaggggaggg 268 ||||||||||||||||||||||| Sbjct: 24409851 ctcgcgagcagagcaggggaggg 24409829 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 21318865 gcgagcagagcaggggaggg 21318846 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 14554956 gcgagcagagcaggggaggg 14554975
>dbj|AK065975.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013045D18, full insert sequence Length = 1546 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 246 ctcgcgagcagagcaggggaggg 268 ||||||||||||||||||||||| Sbjct: 79 ctcgcgagcagagcaggggaggg 101
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 245 tctcgcgagcagagcaggggagg 267 ||||||||||||||||||||||| Sbjct: 4956450 tctcgcgagcagagcaggggagg 4956472 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 250 cgagcagagcaggggagggaa 270 ||||||||||||||||||||| Sbjct: 3221787 cgagcagagcaggggagggaa 3221767 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 26103372 gcgagcagagcaggggaggg 26103353
>emb|BX536967.2|CNS09SBH Oryza sativa chromosome 12, . BAC OSJNBa0029N15 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 141053 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 245 tctcgcgagcagagcaggggagg 267 ||||||||||||||||||||||| Sbjct: 3491 tctcgcgagcagagcaggggagg 3469
>gb|AC125064.6| Mus musculus BAC clone RP23-430F7 from chromosome 14, complete sequence Length = 188477 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 441 gagagagaactgagaagaaca 461 ||||||||||||||||||||| Sbjct: 93999 gagagagaactgagaagaaca 94019
>emb|AL355515.12| Human DNA sequence from clone RP4-640F2 on chromosome 1 Contains the 5' end of a novel gene (KIAA1573), complete sequence Length = 105208 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 251 gagcagagcaggggagggaag 271 ||||||||||||||||||||| Sbjct: 8669 gagcagagcaggggagggaag 8689
>emb|AL645912.18| Mouse DNA sequence from clone RP23-134G19 on chromosome 11 Contains the 5' end of the gene for a novel protein similar to human KIBRA, a pseudogene similar to part of actin, the Odz2 gene for odd Oz/ten-m homolog 2 (Drosophila) and two CpG islands, complete sequence Length = 186736 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 252 agcagagcaggggagggaagg 272 ||||||||||||||||||||| Sbjct: 85943 agcagagcaggggagggaagg 85923
>dbj|AK103122.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033119K12, full insert sequence Length = 1756 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 cgagcagagcaggggagggaa 270 ||||||||||||||||||||| Sbjct: 94 cgagcagagcaggggagggaa 114
>emb|AL713936.4|CNS07YPH Oryza sativa chromosome 12, . BAC OJ1057_G11 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 109081 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 250 cgagcagagcaggggagggaa 270 ||||||||||||||||||||| Sbjct: 12228 cgagcagagcaggggagggaa 12208
>ref|XM_482256.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1599 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 193 gcgagcagagcaggggaggg 212
>gb|AC105318.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1058_F05, complete sequence Length = 109126 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 105471 gcgagcagagcaggggaggg 105452
>ref|XM_482960.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1834 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 116 gcgagcagagcaggggaggg 135
>ref|XM_482060.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1033 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 73 gcgagcagagcaggggaggg 92
>ref|XM_507579.1| PREDICTED Oryza sativa (japonica cultivar-group), P0690C12.28 mRNA Length = 1130 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 88 gcgagcagagcaggggaggg 107
>ref|XM_507208.2| PREDICTED Oryza sativa (japonica cultivar-group), P0690C12.28 mRNA Length = 1195 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 115 gcgagcagagcaggggaggg 134
>ref|XM_468454.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1452 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 64 gcgagcagagcaggggaggg 83
>ref|XM_466018.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3627 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 226 gcgagcagagcaggggaggg 245
>ref|XM_464525.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2119 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 110 gcgagcagagcaggggaggg 129
>ref|XM_506751.1| PREDICTED Oryza sativa (japonica cultivar-group), P0419A09.31 mRNA Length = 2131 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 109 gcgagcagagcaggggaggg 128
>ref|NM_195328.1| Oryza sativa (japonica cultivar-group) putative cinnamyl alcohol dehydrogenase (OSJNBb0005F01.4), mRNA Length = 1257 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 34 gcgagcagagcaggggaggg 53
>ref|NM_195275.1| Oryza sativa (japonica cultivar-group) putative ubiquitin-conjugating enzyme (OSJNBb0038H12.1), mRNA Length = 977 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 74 gcgagcagagcaggggaggg 93
>ref|NM_193577.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1209 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 312 gcgagcagagcaggggaggg 331
>ref|XM_477198.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1186 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 88 gcgagcagagcaggggaggg 107
>gb|AC124141.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0065C11, complete sequence Length = 141578 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 92961 gcgagcagagcaggggaggg 92980
>gb|AY022043.1| Oryza sativa microsatellite MRG4368 containing (TC)X13, closest to marker S10074, genomic sequence Length = 226 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 44 gcgagcagagcaggggaggg 63
>gb|AC105932.6| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0038H12 map E60284SA, complete sequence Length = 139190 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 28885 gcgagcagagcaggggaggg 28866
>gb|AC078839.4| Oryza sativa (japonica cultivar-group) chromosome X clone OSJNBa0094J09, complete sequence Length = 168192 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 101266 gcgagcagagcaggggaggg 101247
>gb|AC096856.7| Oryza sativa chromosome 3 BAC OSJNBa0075M12 genomic sequence, complete sequence Length = 130272 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 38410 gcgagcagagcaggggaggg 38391
>gb|AC140478.2| Mus musculus BAC clone RP24-149A3 from chromosome 6, complete sequence Length = 162440 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 gcagagcaggggagggaagg 272 |||||||||||||||||||| Sbjct: 8119 gcagagcaggggagggaagg 8138
>gb|AC134930.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0042J17, complete sequence Length = 124139 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 36187 gcgagcagagcaggggaggg 36168
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 35037509 gcgagcagagcaggggaggg 35037490 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 5249795 gcgagcagagcaggggaggg 5249776
>gb|AC133098.7| Mus musculus BAC clone RP23-336L12 from chromosome 6, complete sequence Length = 182955 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 gcagagcaggggagggaagg 272 |||||||||||||||||||| Sbjct: 12937 gcagagcaggggagggaagg 12918
>gb|AC079443.48| Mus musculus strain C57BL/6J clone rp23-381f7 map 6, complete sequence Length = 207091 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 251 gagcagagcaggggagggaa 270 |||||||||||||||||||| Sbjct: 167723 gagcagagcaggggagggaa 167742
>gb|AC104231.10| Homo sapiens chromosome 15, clone RP11-96H23, complete sequence Length = 81256 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 372 tcacctctgccttcagccgc 391 |||||||||||||||||||| Sbjct: 34047 tcacctctgccttcagccgc 34066
>gb|AC146581.1| Oryza sativa (japonica cultivar-group) Nipponbare strain chromosome 3 clone OSJNBa0021H20, complete sequence Length = 133079 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 73197 gcgagcagagcaggggaggg 73178
>emb|BX537154.4| Human DNA sequence from clone RP11-775F1 on chromosome X Contains the gene for a novel protein similar to family D 4 melanoma antigen (MAGED4), complete sequence Length = 87333 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 gagcaggggagggaaggctt 275 |||||||||||||||||||| Sbjct: 11904 gagcaggggagggaaggctt 11923
>emb|AL928717.5| Human DNA sequence from clone RP11-363G10 on chromosome X Contains the gene for family D 4 melanoma antigen (MAGED4) (KIAA1859, DKFZp761N1924, FLJ37222, FLJ25964), gene LOC349420 (FLJ39060) and a CpG island, complete sequence Length = 186278 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 gagcaggggagggaaggctt 275 |||||||||||||||||||| Sbjct: 44998 gagcaggggagggaaggctt 44979
>gb|AC104322.4| Oryza sativa chromosome 10 BAC OSJNBb0005F01 genomic sequence, complete sequence Length = 151428 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 126207 gcgagcagagcaggggaggg 126226
>gb|AC154410.2| Mus musculus BAC clone RP23-168K22 from chromosome 13, complete sequence Length = 182242 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 411 aggctgccagatgcgcagaatgtt 434 |||||||||||||| ||||||||| Sbjct: 146264 aggctgccagatgcacagaatgtt 146287
>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome Length = 5727534 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 gatgaaagctttcccaggct 415 |||||||||||||||||||| Sbjct: 1452928 gatgaaagctttcccaggct 1452947
>gb|AC069227.24| Homo sapiens 12 BAC RP11-478G16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 167398 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 221 gaaaatttcagaagccaagaaagg 244 |||||||||||||| ||||||||| Sbjct: 147974 gaaaatttcagaagtcaagaaagg 147997
>gb|AC115687.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0091J11, from chromosome 3, complete sequence Length = 181163 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 6723 gcgagcagagcaggggaggg 6742
>gb|AF404777.1| Homo sapiens phenylalanine hydroxylase (PAH) gene, complete cds Length = 171266 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 221 gaaaatttcagaagccaagaaagg 244 |||||||||||||| ||||||||| Sbjct: 151847 gaaaatttcagaagtcaagaaagg 151870
>gb|AC008931.8| Homo sapiens chromosome 5 clone CTD-2294L1, complete sequence Length = 140394 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 411 aggctgccagatgcgcagaatgtt 434 |||||||||||||| ||||||||| Sbjct: 65778 aggctgccagatgcacagaatgtt 65755
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 12302110 gcgagcagagcaggggaggg 12302091 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 6190802 gcgagcagagcaggggaggg 6190821 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 5894998 gcgagcagagcaggggaggg 5895017
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 35127581 gcgagcagagcaggggaggg 35127562 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 5249010 gcgagcagagcaggggaggg 5248991
>gb|AC020911.9| Homo sapiens chromosome 19 clone CTD-2562J15, complete sequence Length = 196512 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 ggatgaaagctttcccaggc 414 |||||||||||||||||||| Sbjct: 87183 ggatgaaagctttcccaggc 87164
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 35311975 gcgagcagagcaggggaggg 35311994 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 19116564 gcgagcagagcaggggaggg 19116545 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 5697726 gcgagcagagcaggggaggg 5697707
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 42590193 gcgagcagagcaggggaggg 42590174 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 27329804 gcgagcagagcaggggaggg 27329823 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 21700197 gcgagcagagcaggggaggg 21700178
>dbj|AP004365.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0458E05 Length = 193577 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 111076 gcgagcagagcaggggaggg 111057
>gb|AC009226.3| Homo sapiens BAC clone RP11-167C7 from 2, complete sequence Length = 138778 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 tactttgtgagtggactcag 294 |||||||||||||||||||| Sbjct: 49020 tactttgtgagtggactcag 49001
>dbj|AP004194.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0014E08 Length = 144219 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 12699 gcgagcagagcaggggaggg 12718
>dbj|AP003760.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0063G05 Length = 182681 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 110321 gcgagcagagcaggggaggg 110340
>dbj|AP004020.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1119_A01 Length = 108727 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 62309 gcgagcagagcaggggaggg 62328
>dbj|AP003141.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0002B05 Length = 141275 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 52248 gcgagcagagcaggggaggg 52229
>dbj|AP005774.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0086N05 Length = 163670 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 106726 gcgagcagagcaggggaggg 106745
>dbj|AP004772.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0415B12 Length = 157419 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 14813 gcgagcagagcaggggaggg 14794
>dbj|AP005749.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0047A17 Length = 149142 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 122085 gcgagcagagcaggggaggg 122066
>dbj|AP004878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0474F11 Length = 139544 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 124025 gcgagcagagcaggggaggg 124044
>dbj|AP004869.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0419A09 Length = 168064 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 125462 gcgagcagagcaggggaggg 125443
>dbj|AP003917.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1666_A04 Length = 90097 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 34488 gcgagcagagcaggggaggg 34507
>dbj|AP004465.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0690C12 Length = 139693 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 119549 gcgagcagagcaggggaggg 119530
>dbj|AK121782.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093P19, full insert sequence Length = 3628 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 227 gcgagcagagcaggggaggg 246
>dbj|AK120266.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013047H13, full insert sequence Length = 2119 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 110 gcgagcagagcaggggaggg 129
>dbj|AK120106.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013023K07, full insert sequence Length = 5354 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 171 gcgagcagagcaggggaggg 190
>dbj|AP003904.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1051_A08 Length = 137583 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 83262 gcgagcagagcaggggaggg 83243
>dbj|AK104805.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-D12, full insert sequence Length = 972 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 108 gcgagcagagcaggggaggg 127
>dbj|AK104511.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-H10, full insert sequence Length = 1130 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 88 gcgagcagagcaggggaggg 107
>dbj|AK104158.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-210-H05, full insert sequence Length = 1033 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 73 gcgagcagagcaggggaggg 92
>dbj|AK103583.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133A18, full insert sequence Length = 2027 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 130 gcgagcagagcaggggaggg 149
>dbj|AK103406.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033128D10, full insert sequence Length = 1185 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 87 gcgagcagagcaggggaggg 106
>dbj|AK101664.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033057M08, full insert sequence Length = 1100 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 262 gcgagcagagcaggggaggg 281
>dbj|AK100521.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100L19, full insert sequence Length = 2748 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 162 gcgagcagagcaggggaggg 181
>dbj|AK100223.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023047H21, full insert sequence Length = 1245 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 97 gcgagcagagcaggggaggg 116
>dbj|AK098937.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013036H15, full insert sequence Length = 998 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 110 gcgagcagagcaggggaggg 129
>dbj|AK074017.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033073D08, full insert sequence Length = 2009 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 140 gcgagcagagcaggggaggg 159
>dbj|AK072368.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023072G22, full insert sequence Length = 2131 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 109 gcgagcagagcaggggaggg 128
>dbj|AK071873.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023123H16, full insert sequence Length = 1599 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 193 gcgagcagagcaggggaggg 212
>dbj|AK070636.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023056F23, full insert sequence Length = 2675 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 149 gcgagcagagcaggggaggg 168
>dbj|AK070541.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023056A05, full insert sequence Length = 1195 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 115 gcgagcagagcaggggaggg 134
>dbj|AK069622.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023023F15, full insert sequence Length = 2023 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 126 gcgagcagagcaggggaggg 145
>dbj|AK068221.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135D23, full insert sequence Length = 1443 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 102 gcgagcagagcaggggaggg 121
>dbj|AK067542.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013110L13, full insert sequence Length = 4080 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 138 gcgagcagagcaggggaggg 157
>dbj|AK066484.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013070C18, full insert sequence Length = 942 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 106 gcgagcagagcaggggaggg 125
>dbj|AK066304.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013060B01, full insert sequence Length = 1833 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 115 gcgagcagagcaggggaggg 134
>dbj|AK065918.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013049C12, full insert sequence Length = 1587 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 145 gcgagcagagcaggggaggg 164
>dbj|AK064839.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000F24, full insert sequence Length = 2813 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 121 gcgagcagagcaggggaggg 140
>dbj|AK061159.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-H06, full insert sequence Length = 1126 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 287 gcgagcagagcaggggaggg 306
>dbj|AK059735.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-B02, full insert sequence Length = 1010 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 122 gcgagcagagcaggggaggg 141
>dbj|AK058380.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-H04, full insert sequence Length = 1452 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 64 gcgagcagagcaggggaggg 83
>emb|AL929332.15| Mouse DNA sequence from clone RP23-476I19 on chromosome 2, complete sequence Length = 112785 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 441 gagagagaactgagaagaac 460 |||||||||||||||||||| Sbjct: 93751 gagagagaactgagaagaac 93770
>gb|AC174450.2| Mus musculus BAC clone RP23-116E13 from chromosome 13, complete sequence Length = 200641 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 411 aggctgccagatgcgcagaatgtt 434 |||||||||||||| ||||||||| Sbjct: 125595 aggctgccagatgcacagaatgtt 125618
>gb|AC153584.5| Mus musculus 6 BAC RP23-27C9 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 208921 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 gagcagagcaggggagggaa 270 |||||||||||||||||||| Sbjct: 171165 gagcagagcaggggagggaa 171146
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 12309450 gcgagcagagcaggggaggg 12309431 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 6192388 gcgagcagagcaggggaggg 6192407 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 5896184 gcgagcagagcaggggaggg 5896203
>emb|BX000457.2|CNS08CDE Oryza sativa chromosome 12, . BAC OJ1388_B05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 144241 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 249 gcgagcagagcaggggaggg 268 |||||||||||||||||||| Sbjct: 65434 gcgagcagagcaggggaggg 65415
>dbj|AB056059.1| Homo sapiens MAGE E1 gene, complete cds, alternative splicing Length = 7463 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 gagcaggggagggaaggctt 275 |||||||||||||||||||| Sbjct: 1437 gagcaggggagggaaggctt 1418 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,346,829 Number of Sequences: 3902068 Number of extensions: 4346829 Number of successful extensions: 79909 Number of sequences better than 10.0: 115 Number of HSP's better than 10.0 without gapping: 128 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 79066 Number of HSP's gapped (non-prelim): 842 length of query: 594 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 571 effective length of database: 17,143,297,704 effective search space: 9788822988984 effective search space used: 9788822988984 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)