ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd23f06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DQ285630.1| Oryza sativa (indica cultivar-group) putative nitrate-induced NOI protein (75-1-127BAC12.1), putative NBS-LRR disease resistance protein (Nbs1-Pi9), putative NBS-LRR disease resistance protein (Nbs3-Pi9), and NBS-LRR disease resistance protein (Pi9) genes, complete cds; putative NBS-LRR disease resistance protein (Nbs4-Pi9) pseudogene, complete sequence; putative NBS-LRR disease resistance protein (Nbs5-Pi9) gene, complete cds; putative NBS-LRR disease resistance protein (Nbs6-Pi9) gene, partial cds; and solo-long terminal repeat retrotransposon, complete sequence Length = 76272 Score = 220 bits (111), Expect = 4e-54 Identities = 165/183 (90%) Strand = Plus / Plus Query: 120 ggaggaatctggtcgccctttgcccaagtttggcgaatgggacgtcaacgacccagcttc 179 ||||||| | ||||| || |||||||||||||| |||||||| ||||||||||||||||| Sbjct: 12379 ggaggaagcaggtcgacccttgcccaagtttggtgaatgggatgtcaacgacccagcttc 12438 Query: 180 tgctgatggattcacagttatattcaacaaagccagggatgagaaaaaggctgggaatgg 239 |||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 12439 tgctgatggattcacagtgatattcaacaaagccagagatgagaaaaagggtgggaatgg 12498 Query: 240 acaagatactgaatccccttgcaaagacgccaggactgagagggtggaatcttatgccac 299 ||||||||||| || || |||||||| | |||||||||||||||||||| |||||| | Sbjct: 12499 gcaagatactgattcaccctgcaaagagactaggactgagagggtggaatcatatgcccc 12558 Query: 300 caa 302 ||| Sbjct: 12559 caa 12561 Score = 79.8 bits (40), Expect = 9e-12 Identities = 40/40 (100%) Strand = Plus / Plus Query: 408 tttaattttgctatatacatactatccataagaccttgta 447 |||||||||||||||||||||||||||||||||||||||| Sbjct: 12788 tttaattttgctatatacatactatccataagaccttgta 12827 Score = 60.0 bits (30), Expect = 8e-06 Identities = 73/86 (84%), Gaps = 1/86 (1%) Strand = Plus / Plus Query: 479 tgggtatctcgtaaaactctgaagtgtttgtatgtatggtgtgagggttgccagacactc 538 |||| ||||| ||||||||||| |||| ||||||||| ||||||||||| |||| | | Sbjct: 12859 tgggcatctcttaaaactctgaggtgtgtgtatgtat-gtgtgagggttatcagatgcac 12917 Query: 539 gtttggataagtgaacttctgattgt 564 || |||||| ||||||||||||||| Sbjct: 12918 attcggataaatgaacttctgattgt 12943 Score = 50.1 bits (25), Expect = 0.008 Identities = 40/45 (88%) Strand = Plus / Plus Query: 313 aagaagtggttttgctgcgtgacgccaagtcctacacaatcttga 357 ||||| ||||||||||| ||||| | |||||||||||||||||| Sbjct: 12707 aagaaatggttttgctgtgtgacatccagtcctacacaatcttga 12751
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 208 bits (105), Expect = 1e-50 Identities = 168/189 (88%) Strand = Plus / Plus Query: 120 ggaggaatctggtcgccctttgcccaagtttggcgaatgggacgtcaacgacccagcttc 179 ||||||| | ||||| || |||||||||||||| |||||||| |||||||||||||| || Sbjct: 10217909 ggaggaagcaggtcgtcccttgcccaagtttggtgaatgggatgtcaacgacccagcgtc 10217968 Query: 180 tgctgatggattcacagttatattcaacaaagccagggatgagaaaaaggctgggaatgg 239 ||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 10217969 cgctgatggattcacagtgatattcaacaaagccagagatgagaaaaagggtgggaatgg 10218028 Query: 240 acaagatactgaatccccttgcaaagacgccaggactgagagggtggaatcttatgccac 299 ||||||||||| || || |||||||| | |||||||||||||||||||| |||||| | Sbjct: 10218029 gcaagatactgattcaccctgcaaagaaactaggactgagagggtggaatcatatgcccc 10218088 Query: 300 caaggcaaa 308 |||| |||| Sbjct: 10218089 caagacaaa 10218097 Score = 73.8 bits (37), Expect = 6e-10 Identities = 37/37 (100%) Strand = Plus / Plus Query: 408 tttaattttgctatatacatactatccataagacctt 444 ||||||||||||||||||||||||||||||||||||| Sbjct: 10218318 tttaattttgctatatacatactatccataagacctt 10218354 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 313 aagaagtggttttgctgcgtgacgccaagtcctacacaatcttga 357 ||||| ||||||||||||||||| | |||||||||||||||||| Sbjct: 10218237 aagaaatggttttgctgcgtgacatccagtcctacacaatcttga 10218281 Score = 52.0 bits (26), Expect = 0.002 Identities = 72/86 (83%), Gaps = 1/86 (1%) Strand = Plus / Plus Query: 479 tgggtatctcgtaaaactctgaagtgtttgtatgtatggtgtgagggttgccagacactc 538 |||| ||||| ||||||| ||| |||| |||||||||| |||||||||| |||| | | Sbjct: 10218389 tgggcatctcttaaaactttgaggtgtgtgtatgtatg-tgtgagggttatcagatgcac 10218447 Query: 539 gtttggataagtgaacttctgattgt 564 || |||||| ||||||||||||||| Sbjct: 10218448 attcggataaatgaacttctgattgt 10218473
>dbj|AP005659.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0649C11 Length = 138870 Score = 208 bits (105), Expect = 1e-50 Identities = 168/189 (88%) Strand = Plus / Plus Query: 120 ggaggaatctggtcgccctttgcccaagtttggcgaatgggacgtcaacgacccagcttc 179 ||||||| | ||||| || |||||||||||||| |||||||| |||||||||||||| || Sbjct: 22136 ggaggaagcaggtcgtcccttgcccaagtttggtgaatgggatgtcaacgacccagcgtc 22195 Query: 180 tgctgatggattcacagttatattcaacaaagccagggatgagaaaaaggctgggaatgg 239 ||||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||| Sbjct: 22196 cgctgatggattcacagtgatattcaacaaagccagagatgagaaaaagggtgggaatgg 22255 Query: 240 acaagatactgaatccccttgcaaagacgccaggactgagagggtggaatcttatgccac 299 ||||||||||| || || |||||||| | |||||||||||||||||||| |||||| | Sbjct: 22256 gcaagatactgattcaccctgcaaagaaactaggactgagagggtggaatcatatgcccc 22315 Query: 300 caaggcaaa 308 |||| |||| Sbjct: 22316 caagacaaa 22324 Score = 73.8 bits (37), Expect = 6e-10 Identities = 37/37 (100%) Strand = Plus / Plus Query: 408 tttaattttgctatatacatactatccataagacctt 444 ||||||||||||||||||||||||||||||||||||| Sbjct: 22545 tttaattttgctatatacatactatccataagacctt 22581 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 313 aagaagtggttttgctgcgtgacgccaagtcctacacaatcttga 357 ||||| ||||||||||||||||| | |||||||||||||||||| Sbjct: 22464 aagaaatggttttgctgcgtgacatccagtcctacacaatcttga 22508 Score = 52.0 bits (26), Expect = 0.002 Identities = 72/86 (83%), Gaps = 1/86 (1%) Strand = Plus / Plus Query: 479 tgggtatctcgtaaaactctgaagtgtttgtatgtatggtgtgagggttgccagacactc 538 |||| ||||| ||||||| ||| |||| |||||||||| |||||||||| |||| | | Sbjct: 22616 tgggcatctcttaaaactttgaggtgtgtgtatgtatg-tgtgagggttatcagatgcac 22674 Query: 539 gtttggataagtgaacttctgattgt 564 || |||||| ||||||||||||||| Sbjct: 22675 attcggataaatgaacttctgattgt 22700
>gb|AY104853.1| Zea mays PCO142365 mRNA sequence Length = 1031 Score = 167 bits (84), Expect = 5e-38 Identities = 159/184 (86%) Strand = Plus / Plus Query: 113 ccatgtcggaggaatctggtcgccctttgcccaagtttggcgaatgggacgtcaacgacc 172 ||||| |||||||||| || ||||| ||||| ||||||||||| ||||| || || || | Sbjct: 355 ccatggcggaggaatcaggccgccccttgccaaagtttggcgattgggatgttaatgatc 414 Query: 173 cagcttctgctgatggattcacagttatattcaacaaagccagggatgagaaaaaggctg 232 |||||||||| || |||||||| || ||||||||||||||||| || ||||| |||| || Sbjct: 415 cagcttctgcagacggattcactgtcatattcaacaaagccagagacgagaagaagggtg 474 Query: 233 ggaatggacaagatactgaatccccttgcaaagacgccaggactgagagggtggaatctt 292 |||| |||||||| ||||| || |||| ||| ||| |||||||||||||||||||||||| Sbjct: 475 ggaacggacaagacactgagtcaccttccaaggacaccaggactgagagggtggaatctt 534 Query: 293 atgc 296 |||| Sbjct: 535 atgc 538 Score = 44.1 bits (22), Expect = 0.50 Identities = 73/90 (81%) Strand = Plus / Minus Query: 277 gagagggtggaatcttatgccaccaaggcaaattcaaagaagtggttttgctgcgtgacg 336 |||||||||||||||||||| | ||| ||| ||||||| |||||||| || ||||| Sbjct: 292 gagagggtggaatcttatgctgcaaagccaagcacaaagaaatggttttgttgtgtgaca 233 Query: 337 ccaagtcctacacaatcttgaggaggacaa 366 | || ||||| ||||| |||||| ||||| Sbjct: 232 gccagccctacgcaatcctgaggaagacaa 203 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 483 tatctcgtaaaactctgaagtgtttgtatgtatggtgtgag 523 |||||||||||||||| ||| ||||||||||||||||| Sbjct: 708 tatctcgtaaaactcttgcgtgcgtgtatgtatggtgtgag 748 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 421 tatacatactatccataagac 441 ||||||||||||||||||||| Sbjct: 646 tatacatactatccataagac 666 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 421 tatacatactatccataagac 441 ||||||||||||||||||||| Sbjct: 165 tatacatactatccataagac 145 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Minus Query: 483 tatctcgtaaaactctgaagtgtttgtatgtatggtgtgag 523 |||||||||||||||| ||| ||||||||||||||||| Sbjct: 115 tatctcgtaaaactcttgcgtgcgtgtatgtatggtgtgag 75
>gb|AF045033.1|AF045033 Zea mays nitrate-induced NOI protein mRNA, complete cds Length = 612 Score = 147 bits (74), Expect = 5e-32 Identities = 158/186 (84%) Strand = Plus / Plus Query: 111 atccatgtcggaggaatctggtcgccctttgcccaagtttggcgaatgggacgtcaacga 170 ||||||| |||||||||| || || || ||||| |||||||| |||||||| |||||||| Sbjct: 150 atccatggcggaggaatcaggccgtcccttgccaaagtttggtgaatgggatgtcaacga 209 Query: 171 cccagcttctgctgatggattcacagttatattcaacaaagccagggatgagaaaaaggc 230 || ||||| || || ||||| || || ||||||||||||||||| |||||||| |||| Sbjct: 210 tccggcttccgcagacggatttactgtcatattcaacaaagccagagatgagaagaaggg 269 Query: 231 tgggaatggacaagatactgaatccccttgcaaagacgccaggactgagagggtggaatc 290 ||||||||| ||||| || || || |||| ||| ||| ||||||||||||||||||| || Sbjct: 270 tgggaatggtcaagacacagactcaccttccaaggaccccaggactgagagggtggagtc 329 Query: 291 ttatgc 296 |||||| Sbjct: 330 ttatgc 335 Score = 44.1 bits (22), Expect = 0.50 Identities = 35/38 (92%), Gaps = 1/38 (2%) Strand = Plus / Plus Query: 421 tatacatactatccataagaccttgtaagaggtaccca 458 ||||||||||||||||||||| ||| ||||||||||| Sbjct: 441 tatacatactatccataagacactgt-agaggtaccca 477
>gb|AF030385.1|AF030385 Zea mays nitrate-induced NOI protein gene, complete cds Length = 5278 Score = 137 bits (69), Expect = 4e-29 Identities = 150/177 (84%) Strand = Plus / Plus Query: 120 ggaggaatctggtcgccctttgcccaagtttggcgaatgggacgtcaacgacccagcttc 179 ||||||||| || || || ||||| |||||||| |||||||| |||||||| || ||||| Sbjct: 4176 ggaggaatcaggccgtcccttgccaaagtttggtgaatgggatgtcaacgatccggcttc 4235 Query: 180 tgctgatggattcacagttatattcaacaaagccagggatgagaaaaaggctgggaatgg 239 || || ||||| || || ||||||||||||||||| |||||||| |||| ||||||||| Sbjct: 4236 cgcagacggatttactgtcatattcaacaaagccagagatgagaagaagggtgggaatgg 4295 Query: 240 acaagatactgaatccccttgcaaagacgccaggactgagagggtggaatcttatgc 296 ||||| || || || |||| ||| ||| ||||||||||||||||||| |||||||| Sbjct: 4296 tcaagacacagactcaccttccaaggaccccaggactgagagggtggagtcttatgc 4352 Score = 44.1 bits (22), Expect = 0.50 Identities = 35/38 (92%), Gaps = 1/38 (2%) Strand = Plus / Plus Query: 421 tatacatactatccataagaccttgtaagaggtaccca 458 ||||||||||||||||||||| ||| ||||||||||| Sbjct: 4683 tatacatactatccataagacactgt-agaggtaccca 4719
>emb|CR962136.2| Medicago truncatula chromosome 5 clone mth2-52n22, COMPLETE SEQUENCE Length = 87738 Score = 87.7 bits (44), Expect = 4e-14 Identities = 74/84 (88%) Strand = Plus / Minus Query: 145 aagtttggcgaatgggacgtcaacgacccagcttctgctgatggattcacagttatattc 204 ||||||||||||||||| |||||||| |||||||| ||||| || | |||||| || || Sbjct: 58197 aagtttggcgaatgggatgtcaacgatccagcttcagctgaaggttacacagtgattttt 58138 Query: 205 aacaaagccagggatgagaaaaag 228 |||||||| ||||||||||||||| Sbjct: 58137 aacaaagctagggatgagaaaaag 58114
>emb|CR931742.1| Medicago truncatula chromosome 5 clone mth2-28i20, COMPLETE SEQUENCE Length = 115743 Score = 87.7 bits (44), Expect = 4e-14 Identities = 74/84 (88%) Strand = Plus / Minus Query: 145 aagtttggcgaatgggacgtcaacgacccagcttctgctgatggattcacagttatattc 204 ||||||||||||||||| |||||||| |||||||| ||||| || | |||||| || || Sbjct: 22726 aagtttggcgaatgggatgtcaacgatccagcttcagctgaaggttacacagtgattttt 22667 Query: 205 aacaaagccagggatgagaaaaag 228 |||||||| ||||||||||||||| Sbjct: 22666 aacaaagctagggatgagaaaaag 22643
>gb|AC161106.13| Medicago truncatula clone mth2-168f23, complete sequence Length = 94766 Score = 79.8 bits (40), Expect = 9e-12 Identities = 79/92 (85%) Strand = Plus / Plus Query: 136 cctttgcccaagtttggcgaatgggacgtcaacgacccagcttctgctgatggattcaca 195 ||||| ||||||||||| |||||||| || || || || || || ||||| |||||||| Sbjct: 82132 cctttacccaagtttggggaatgggatgtgaatgatcctgcatcagctgaaggattcact 82191 Query: 196 gttatattcaacaaagccagggatgagaaaaa 227 |||||||||||||| ||||| ||||||||||| Sbjct: 82192 gttatattcaacaaggccagagatgagaaaaa 82223
>dbj|AK059360.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-026-D12, full insert sequence Length = 303 Score = 73.8 bits (37), Expect = 6e-10 Identities = 37/37 (100%) Strand = Plus / Plus Query: 408 tttaattttgctatatacatactatccataagacctt 444 ||||||||||||||||||||||||||||||||||||| Sbjct: 71 tttaattttgctatatacatactatccataagacctt 107 Score = 52.0 bits (26), Expect = 0.002 Identities = 72/86 (83%), Gaps = 1/86 (1%) Strand = Plus / Plus Query: 479 tgggtatctcgtaaaactctgaagtgtttgtatgtatggtgtgagggttgccagacactc 538 |||| ||||| ||||||| ||| |||| |||||||||| |||||||||| |||| | | Sbjct: 142 tgggcatctcttaaaactttgaggtgtgtgtatgtatg-tgtgagggttatcagatgcac 200 Query: 539 gtttggataagtgaacttctgattgt 564 || |||||| ||||||||||||||| Sbjct: 201 attcggataaatgaacttctgattgt 226 Score = 44.1 bits (22), Expect = 0.50 Identities = 31/34 (91%) Strand = Plus / Plus Query: 324 ttgctgcgtgacgccaagtcctacacaatcttga 357 |||||||||||| | |||||||||||||||||| Sbjct: 1 ttgctgcgtgacatccagtcctacacaatcttga 34
>ref|XM_467563.1| Oryza sativa (japonica cultivar-group), mRNA Length = 213 Score = 65.9 bits (33), Expect = 1e-07 Identities = 72/85 (84%) Strand = Plus / Plus Query: 145 aagtttggcgaatgggacgtcaacgacccagcttctgctgatggattcacagttatattc 204 ||||| |||| ||||||||||||| |||| || ||||| || || ||||| || || ||| Sbjct: 31 aagttcggcgcatgggacgtcaacaacccggcctctgccgacggtttcacggtgatcttc 90 Query: 205 aacaaagccagggatgagaaaaagg 229 | |||||||||||||||||| |||| Sbjct: 91 agcaaagccagggatgagaagaagg 115 Score = 40.1 bits (20), Expect = 7.8 Identities = 41/48 (85%) Strand = Plus / Plus Query: 313 aagaagtggttttgctgcgtgacgccaagtcctacacaatcttgagga 360 ||||||||||||||||| ||| |||| || || || ||| |||||||| Sbjct: 144 aagaagtggttttgctgtgtgtcgcccagccccacccaaccttgagga 191
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 65.9 bits (33), Expect = 1e-07 Identities = 72/85 (84%) Strand = Plus / Minus Query: 145 aagtttggcgaatgggacgtcaacgacccagcttctgctgatggattcacagttatattc 204 ||||| |||| ||||||||||||| |||| || ||||| || || ||||| || || ||| Sbjct: 30174118 aagttcggcgcatgggacgtcaacaacccggcctctgccgacggtttcacggtgatcttc 30174059 Query: 205 aacaaagccagggatgagaaaaagg 229 | |||||||||||||||||| |||| Sbjct: 30174058 agcaaagccagggatgagaagaagg 30174034 Score = 40.1 bits (20), Expect = 7.8 Identities = 41/48 (85%) Strand = Plus / Minus Query: 313 aagaagtggttttgctgcgtgacgccaagtcctacacaatcttgagga 360 ||||||||||||||||| ||| |||| || || || ||| |||||||| Sbjct: 30173777 aagaagtggttttgctgtgtgtcgcccagccccacccaaccttgagga 30173730
>dbj|AP004179.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1124_G07 Length = 93240 Score = 65.9 bits (33), Expect = 1e-07 Identities = 72/85 (84%) Strand = Plus / Minus Query: 145 aagtttggcgaatgggacgtcaacgacccagcttctgctgatggattcacagttatattc 204 ||||| |||| ||||||||||||| |||| || ||||| || || ||||| || || ||| Sbjct: 46822 aagttcggcgcatgggacgtcaacaacccggcctctgccgacggtttcacggtgatcttc 46763 Query: 205 aacaaagccagggatgagaaaaagg 229 | |||||||||||||||||| |||| Sbjct: 46762 agcaaagccagggatgagaagaagg 46738 Score = 40.1 bits (20), Expect = 7.8 Identities = 41/48 (85%) Strand = Plus / Minus Query: 313 aagaagtggttttgctgcgtgacgccaagtcctacacaatcttgagga 360 ||||||||||||||||| ||| |||| || || || ||| |||||||| Sbjct: 46481 aagaagtggttttgctgtgtgtcgcccagccccacccaaccttgagga 46434
>ref|NM_124967.2| Arabidopsis thaliana NOI AT5G55850 (NOI) mRNA, complete cds Length = 866 Score = 61.9 bits (31), Expect = 2e-06 Identities = 82/99 (82%) Strand = Plus / Plus Query: 130 ggtcgccctttgcccaagtttggcgaatgggacgtcaacgacccagcttctgctgatgga 189 ||||| || ||||| || ||||| |||||||| || || || ||||| || || || || Sbjct: 253 ggtcgtcccttgccaaaatttggtgaatgggatgtgaatgatccagcatcagcagaaggt 312 Query: 190 ttcacagttatattcaacaaagccagggatgagaaaaag 228 || ||||| |||||||||||||| ||||||||||||||| Sbjct: 313 tttacagtgatattcaacaaagctagggatgagaaaaag 351
>gb|AY096671.1| Arabidopsis thaliana putative nitrate-induced NOI protein (At5g55850) mRNA, complete cds Length = 271 Score = 61.9 bits (31), Expect = 2e-06 Identities = 82/99 (82%) Strand = Plus / Plus Query: 130 ggtcgccctttgcccaagtttggcgaatgggacgtcaacgacccagcttctgctgatgga 189 ||||| || ||||| || ||||| |||||||| || || || ||||| || || || || Sbjct: 13 ggtcgtcccttgccaaaatttggtgaatgggatgtgaatgatccagcatcagcagaaggt 72 Query: 190 ttcacagttatattcaacaaagccagggatgagaaaaag 228 || ||||| |||||||||||||| ||||||||||||||| Sbjct: 73 tttacagtgatattcaacaaagctagggatgagaaaaag 111
>gb|AY065260.1| Arabidopsis thaliana putative NOI protein, nitrate-induced (At5g55850) mRNA, complete cds Length = 797 Score = 61.9 bits (31), Expect = 2e-06 Identities = 82/99 (82%) Strand = Plus / Plus Query: 130 ggtcgccctttgcccaagtttggcgaatgggacgtcaacgacccagcttctgctgatgga 189 ||||| || ||||| || ||||| |||||||| || || || ||||| || || || || Sbjct: 259 ggtcgtcccttgccaaaatttggtgaatgggatgtgaatgatccagcatcagcagaaggt 318 Query: 190 ttcacagttatattcaacaaagccagggatgagaaaaag 228 || ||||| |||||||||||||| ||||||||||||||| Sbjct: 319 tttacagtgatattcaacaaagctagggatgagaaaaag 357
>emb|BX833781.1|CNS09Z02 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL76ZG05 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 624 Score = 61.9 bits (31), Expect = 2e-06 Identities = 82/99 (82%) Strand = Plus / Plus Query: 130 ggtcgccctttgcccaagtttggcgaatgggacgtcaacgacccagcttctgctgatgga 189 ||||| || ||||| || ||||| |||||||| || || || ||||| || || || || Sbjct: 204 ggtcgtcccttgccaaaatttggtgaatgggatgtgaatgatccagcatcagcagaaggt 263 Query: 190 ttcacagttatattcaacaaagccagggatgagaaaaag 228 || ||||| |||||||||||||| ||||||||||||||| Sbjct: 264 tttacagtgatattcaacaaagctagggatgagaaaaag 302
>dbj|AB018120.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MWJ3 Length = 42356 Score = 61.9 bits (31), Expect = 2e-06 Identities = 82/99 (82%) Strand = Plus / Plus Query: 130 ggtcgccctttgcccaagtttggcgaatgggacgtcaacgacccagcttctgctgatgga 189 ||||| || ||||| || ||||| |||||||| || || || ||||| || || || || Sbjct: 9432 ggtcgtcccttgccaaaatttggtgaatgggatgtgaatgatccagcatcagcagaaggt 9491 Query: 190 ttcacagttatattcaacaaagccagggatgagaaaaag 228 || ||||| |||||||||||||| ||||||||||||||| Sbjct: 9492 tttacagtgatattcaacaaagctagggatgagaaaaag 9530
>gb|AY105745.1| Zea mays PCO136119 mRNA sequence Length = 677 Score = 61.9 bits (31), Expect = 2e-06 Identities = 70/83 (84%) Strand = Plus / Plus Query: 142 cccaagtttggcgaatgggacgtcaacgacccagcttctgctgatggattcacagttata 201 |||||||| |||||||||||||| ||| |||| || ||||| || || ||||| || || Sbjct: 168 cccaagttcggcgaatgggacgtgaacaacccggcctctgccgacgggttcacggtgatc 227 Query: 202 ttcaacaaagccagggatgagaa 224 |||| ||| |||||||||||||| Sbjct: 228 ttcagcaaggccagggatgagaa 250
>gb|AF030386.1|AF030386 Arabidopsis thaliana NOI protein mRNA, complete cds Length = 632 Score = 61.9 bits (31), Expect = 2e-06 Identities = 82/99 (82%) Strand = Plus / Plus Query: 130 ggtcgccctttgcccaagtttggcgaatgggacgtcaacgacccagcttctgctgatgga 189 ||||| || ||||| || ||||| |||||||| || || || ||||| || || || || Sbjct: 213 ggtcgtcccttgccaaaatttggtgaatgggatgtgaatgatccagcatcagcagaaggt 272 Query: 190 ttcacagttatattcaacaaagccagggatgagaaaaag 228 || ||||| |||||||||||||| ||||||||||||||| Sbjct: 273 tttacagtgatattcaacaaagctagggatgagaaaaag 311
>gb|DQ160112.1| Taraxacum officinale TO72-1rc (To72-1rc) mRNA, partial cds Length = 350 Score = 60.0 bits (30), Expect = 8e-06 Identities = 75/90 (83%) Strand = Plus / Plus Query: 139 ttgcccaagtttggcgaatgggacgtcaacgacccagcttctgctgatggattcacagtt 198 ||||| |||||||| || ||||| || || ||||| || || ||||| || ||||| ||| Sbjct: 64 ttgccaaagtttggtgactgggatgtgaatgaccctgcatcagctgaggggttcacggtt 123 Query: 199 atattcaacaaagccagggatgagaaaaag 228 ||||||||||| || ||| ||||||||||| Sbjct: 124 atattcaacaaggcgaggaatgagaaaaag 153
>gb|AY140529.1| Arabidopsis lyrata clone P3WB2-A11-KAR99-11 unknown protein gene, exons 1 and 2 and partial cds Length = 1105 Score = 58.0 bits (29), Expect = 3e-05 Identities = 80/97 (82%) Strand = Plus / Plus Query: 133 cgccctttgcccaagtttggcgaatgggacgtcaacgacccagcttctgctgatggattc 192 ||||| ||||| ||||||||||||||||| || || ||||| | || ||||| ||||| Sbjct: 908 cgcccgttgccaaagtttggcgaatgggatgtgaatgacccttcatcagctgagggattt 967 Query: 193 acagttatattcaacaaagccagggatgagaaaaagg 229 || ||||| ||||||||||| || | |||||||||| Sbjct: 968 actgttatcttcaacaaagctagaaacgagaaaaagg 1004
>gb|AY140528.1| Arabidopsis lyrata clone P3WB2-A11-KAR99-4 unknown protein gene, exons 1 and 2 and partial cds Length = 1105 Score = 58.0 bits (29), Expect = 3e-05 Identities = 80/97 (82%) Strand = Plus / Plus Query: 133 cgccctttgcccaagtttggcgaatgggacgtcaacgacccagcttctgctgatggattc 192 ||||| ||||| ||||||||||||||||| || || ||||| | || ||||| ||||| Sbjct: 908 cgcccgttgccaaagtttggcgaatgggatgtgaatgacccttcatcagctgagggattt 967 Query: 193 acagttatattcaacaaagccagggatgagaaaaagg 229 || ||||| ||||||||||| || | |||||||||| Sbjct: 968 actgttatcttcaacaaagctagaaacgagaaaaagg 1004
>gb|AY140527.1| Arabidopsis lyrata clone P3WB2-A11-KAR99-3 unknown protein gene, exons 1 and 2 and partial cds Length = 1105 Score = 58.0 bits (29), Expect = 3e-05 Identities = 80/97 (82%) Strand = Plus / Plus Query: 133 cgccctttgcccaagtttggcgaatgggacgtcaacgacccagcttctgctgatggattc 192 ||||| ||||| ||||||||||||||||| || || ||||| | || ||||| ||||| Sbjct: 908 cgcccgttgccaaagtttggcgaatgggatgtgaatgacccttcatcagctgagggattt 967 Query: 193 acagttatattcaacaaagccagggatgagaaaaagg 229 || ||||| ||||||||||| || | |||||||||| Sbjct: 968 actgttatcttcaacaaagctagaaacgagaaaaagg 1004
>emb|BX833526.1|CNS09ZA1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL60ZB12 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 673 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 193 acagttatattcaacaaagccagggatgagaaaaag 228 ||||| |||||||||||||| ||||||||||||||| Sbjct: 196 acagtaatattcaacaaagctagggatgagaaaaag 231
>gb|AY140526.1| Arabidopsis thaliana clone P3WB2-A11-6094 unknown protein gene, exons 1 and 2 and partial cds Length = 1011 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 133 cgccctttgcccaagtttggcgaatgggacgtcaacgacccagcttctgctgatggattc 192 ||||| ||||| ||||||||||||||||| || || ||||| | || ||||| ||||| Sbjct: 803 cgcccgttgccgaagtttggcgaatgggatgtaaatgacccttcatcagctgagggattt 862 Query: 193 acagttatattcaacaaagc 212 || ||||| ||||||||||| Sbjct: 863 actgttatcttcaacaaagc 882
>gb|AY140525.1| Arabidopsis thaliana clone P3WB2-A11-6092 unknown protein gene, exons 1 and 2 and partial cds Length = 1011 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 133 cgccctttgcccaagtttggcgaatgggacgtcaacgacccagcttctgctgatggattc 192 ||||| ||||| ||||||||||||||||| || || ||||| | || ||||| ||||| Sbjct: 803 cgcccgttgccgaagtttggcgaatgggatgtaaatgacccttcatcagctgagggattt 862 Query: 193 acagttatattcaacaaagc 212 || ||||| ||||||||||| Sbjct: 863 actgttatcttcaacaaagc 882
>gb|AY140524.1| Arabidopsis thaliana clone P3WB2-A11-6054 unknown protein gene, exons 1 and 2 and partial cds Length = 1014 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 133 cgccctttgcccaagtttggcgaatgggacgtcaacgacccagcttctgctgatggattc 192 ||||| ||||| ||||||||||||||||| || || ||||| | || ||||| ||||| Sbjct: 803 cgcccgttgccgaagtttggcgaatgggatgttaatgacccttcatcagctgagggattt 862 Query: 193 acagttatattcaacaaagc 212 || ||||| ||||||||||| Sbjct: 863 actgttatcttcaacaaagc 882
>gb|AY140522.1| Arabidopsis thaliana clone P3WB2-A11-1220 unknown protein gene, exons 1 and 2 and partial cds Length = 1012 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 133 cgccctttgcccaagtttggcgaatgggacgtcaacgacccagcttctgctgatggattc 192 ||||| ||||| ||||||||||||||||| || || ||||| | || ||||| ||||| Sbjct: 804 cgcccgttgccgaagtttggcgaatgggatgttaatgacccttcatcagctgagggattt 863 Query: 193 acagttatattcaacaaagc 212 || ||||| ||||||||||| Sbjct: 864 actgttatcttcaacaaagc 883
>gb|AY140521.1| Arabidopsis thaliana clone P3WB2-A11-1202 unknown protein gene, exons 1 and 2 and partial cds Length = 1012 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 133 cgccctttgcccaagtttggcgaatgggacgtcaacgacccagcttctgctgatggattc 192 ||||| ||||| ||||||||||||||||| || || ||||| | || ||||| ||||| Sbjct: 804 cgcccgttgccgaagtttggcgaatgggatgttaatgacccttcatcagctgagggattt 863 Query: 193 acagttatattcaacaaagc 212 || ||||| ||||||||||| Sbjct: 864 actgttatcttcaacaaagc 883
>gb|AY140520.1| Arabidopsis thaliana clone P3WB2-A11-1084 unknown protein gene, exons 1 and 2 and partial cds Length = 1011 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 133 cgccctttgcccaagtttggcgaatgggacgtcaacgacccagcttctgctgatggattc 192 ||||| ||||| ||||||||||||||||| || || ||||| | || ||||| ||||| Sbjct: 803 cgcccgttgccgaagtttggcgaatgggatgttaatgacccttcatcagctgagggattt 862 Query: 193 acagttatattcaacaaagc 212 || ||||| ||||||||||| Sbjct: 863 actgttatcttcaacaaagc 882
>gb|AY140519.1| Arabidopsis thaliana clone P3WB2-A11-1074 unknown protein gene, exons 1 and 2 and partial cds Length = 1014 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 133 cgccctttgcccaagtttggcgaatgggacgtcaacgacccagcttctgctgatggattc 192 ||||| ||||| ||||||||||||||||| || || ||||| | || ||||| ||||| Sbjct: 803 cgcccgttgccgaagtttggcgaatgggatgttaatgacccttcatcagctgagggattt 862 Query: 193 acagttatattcaacaaagc 212 || ||||| ||||||||||| Sbjct: 863 actgttatcttcaacaaagc 882
>gb|AY140518.1| Arabidopsis thaliana clone P3WB2-A11-1006 unknown protein gene, exons 1 and 2 and partial cds Length = 1014 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 133 cgccctttgcccaagtttggcgaatgggacgtcaacgacccagcttctgctgatggattc 192 ||||| ||||| ||||||||||||||||| || || ||||| | || ||||| ||||| Sbjct: 803 cgcccgttgccgaagtttggcgaatgggatgttaatgacccttcatcagctgagggattt 862 Query: 193 acagttatattcaacaaagc 212 || ||||| ||||||||||| Sbjct: 863 actgttatcttcaacaaagc 882
>gb|AY140517.1| Arabidopsis thaliana clone P3WB2-A11-996 unknown protein gene, exons 1 and 2 and partial cds Length = 1014 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 133 cgccctttgcccaagtttggcgaatgggacgtcaacgacccagcttctgctgatggattc 192 ||||| ||||| ||||||||||||||||| || || ||||| | || ||||| ||||| Sbjct: 803 cgcccgttgccgaagtttggcgaatgggatgttaatgacccttcatcagctgagggattt 862 Query: 193 acagttatattcaacaaagc 212 || ||||| ||||||||||| Sbjct: 863 actgttatcttcaacaaagc 882
>gb|AY140516.1| Arabidopsis thaliana clone P3WB2-A11-970 unknown protein gene, exons 1 and 2 and partial cds Length = 1014 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 133 cgccctttgcccaagtttggcgaatgggacgtcaacgacccagcttctgctgatggattc 192 ||||| ||||| ||||||||||||||||| || || ||||| | || ||||| ||||| Sbjct: 803 cgcccgttgccgaagtttggcgaatgggatgttaatgacccttcatcagctgagggattt 862 Query: 193 acagttatattcaacaaagc 212 || ||||| ||||||||||| Sbjct: 863 actgttatcttcaacaaagc 882
>gb|AY140515.1| Arabidopsis thaliana clone P3WB2-A11-903 unknown protein gene, exons 1 and 2 and partial cds Length = 1017 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Plus Query: 133 cgccctttgcccaagtttggcgaatgggacgtcaacgacccagcttctgctgatggattc 192 ||||| ||||| ||||||||||||||||| || || ||||| | || ||||| ||||| Sbjct: 803 cgcccgttgccgaagtttggcgaatgggatgttaatgacccttcatcagctgagggattt 862 Query: 193 acagttatattcaacaaagc 212 || ||||| ||||||||||| Sbjct: 863 actgttatcttcaacaaagc 882
>gb|AY140531.1| Arabidopsis lyrata clone P3WB2-A11-KAR99-15 unknown protein gene, exons 1 and 2 and partial cds Length = 1136 Score = 50.1 bits (25), Expect = 0.008 Identities = 79/97 (81%) Strand = Plus / Plus Query: 133 cgccctttgcccaagtttggcgaatgggacgtcaacgacccagcttctgctgatggattc 192 ||||| ||||| ||||||||||||||||| || || ||||| | || ||||| ||||| Sbjct: 939 cgcccgttgccgaagtttggcgaatgggatgtgaatgacccttcatcagctgagggattt 998 Query: 193 acagttatattcaacaaagccagggatgagaaaaagg 229 || ||||| ||||| ||||| || | |||||||||| Sbjct: 999 actgttatcttcaataaagctagaaacgagaaaaagg 1035
>gb|AY140530.1| Arabidopsis lyrata clone P3WB2-A11-KAR99-14 unknown protein gene, exons 1 and 2 and partial cds Length = 1137 Score = 50.1 bits (25), Expect = 0.008 Identities = 79/97 (81%) Strand = Plus / Plus Query: 133 cgccctttgcccaagtttggcgaatgggacgtcaacgacccagcttctgctgatggattc 192 ||||| ||||| ||||||||||||||||| || || ||||| | || ||||| ||||| Sbjct: 940 cgcccgttgccgaagtttggcgaatgggatgtgaatgacccttcatcagctgagggattt 999 Query: 193 acagttatattcaacaaagccagggatgagaaaaagg 229 || ||||| ||||| ||||| || | |||||||||| Sbjct: 1000 actgttatcttcaataaagctagaaacgagaaaaagg 1036
>ref|NM_126474.1| Arabidopsis thaliana unknown protein AT2G04410 mRNA, complete cds Length = 521 Score = 48.1 bits (24), Expect = 0.032 Identities = 66/80 (82%) Strand = Plus / Plus Query: 133 cgccctttgcccaagtttggcgaatgggacgtcaacgacccagcttctgctgatggattc 192 ||||| ||||| ||||||||||||||||| || || ||||| | || ||||| || || Sbjct: 144 cgcccgttgccgaagtttggcgaatgggatgttaatgacccttcatcagctgaggggttt 203 Query: 193 acagttatattcaacaaagc 212 || ||||| ||||||||||| Sbjct: 204 actgttatcttcaacaaagc 223
>gb|AC006951.6| Arabidopsis thaliana chromosome 2 clone T1O3 map RNS1, complete sequence Length = 99804 Score = 48.1 bits (24), Expect = 0.032 Identities = 66/80 (82%) Strand = Plus / Plus Query: 133 cgccctttgcccaagtttggcgaatgggacgtcaacgacccagcttctgctgatggattc 192 ||||| ||||| ||||||||||||||||| || || ||||| | || ||||| || || Sbjct: 67937 cgcccgttgccgaagtttggcgaatgggatgttaatgacccttcatcagctgaggggttt 67996 Query: 193 acagttatattcaacaaagc 212 || ||||| ||||||||||| Sbjct: 67997 actgttatcttcaacaaagc 68016
>gb|AY058877.1| Arabidopsis thaliana At2g04410/T1O3.18 mRNA, complete cds Length = 563 Score = 48.1 bits (24), Expect = 0.032 Identities = 66/80 (82%) Strand = Plus / Plus Query: 133 cgccctttgcccaagtttggcgaatgggacgtcaacgacccagcttctgctgatggattc 192 ||||| ||||| ||||||||||||||||| || || ||||| | || ||||| || || Sbjct: 93 cgcccgttgccgaagtttggcgaatgggatgttaatgacccttcatcagctgaggggttt 152 Query: 193 acagttatattcaacaaagc 212 || ||||| ||||||||||| Sbjct: 153 actgttatcttcaacaaagc 172
>gb|AY140523.1| Arabidopsis thaliana clone P3WB2-A11-1248 unknown protein gene, exons 1 and 2 and partial cds Length = 1012 Score = 48.1 bits (24), Expect = 0.032 Identities = 66/80 (82%) Strand = Plus / Plus Query: 133 cgccctttgcccaagtttggcgaatgggacgtcaacgacccagcttctgctgatggattc 192 ||||| ||||| ||||||||||||||||| || || ||||| | || ||||| || || Sbjct: 804 cgcccgttgccgaagtttggcgaatgggatgttaatgacccttcatcagctgaggggttt 863 Query: 193 acagttatattcaacaaagc 212 || ||||| ||||||||||| Sbjct: 864 actgttatcttcaacaaagc 883
>gb|AC133489.32| Mus musculus strain C57BL/6J clone rp23-74a5, complete sequence Length = 225524 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 16 tccctttccccttcctcctccc 37 |||||||||||||||||||||| Sbjct: 161376 tccctttccccttcctcctccc 161397
>gb|AC156951.7| Mus musculus 6 BAC RP24-339D12 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 142364 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 16 tccctttccccttcctcctccc 37 |||||||||||||||||||||| Sbjct: 40260 tccctttccccttcctcctccc 40239
>gb|AC004104.1|AC004104 Homo sapiens 12q24 PAC RPCI5-942N13 (Roswell Park Cancer Institute Human PAC library) complete sequence Length = 136037 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 16 tccctttccccttcctcctccc 37 |||||||||||||||||||||| Sbjct: 59393 tccctttccccttcctcctccc 59414
>emb|AL808103.8| Mouse DNA sequence from clone RP23-301G2 on chromosome 4, complete sequence Length = 232070 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Plus Query: 16 tccctttccccttcctcctccc 37 |||||||||||||||||||||| Sbjct: 176578 tccctttccccttcctcctccc 176599
>ref|NM_123429.2| Arabidopsis thaliana unknown protein AT5G40645 mRNA, complete cds Length = 438 Score = 42.1 bits (21), Expect = 2.0 Identities = 48/57 (84%) Strand = Plus / Plus Query: 148 tttggcgaatgggacgtcaacgacccagcttctgctgatggattcacagttatattc 204 ||||| ||||||||||| ||||| ||||| || || || ||||| || ||||||||| Sbjct: 141 tttggagaatgggacgtgaacgatccagcatcagccgaaggatttacggttatattc 197
>gb|AC125180.6| Mus musculus BAC clone RP23-322K1 from chromosome 14, complete sequence Length = 200560 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 aagcccctctccctccccctc 84 ||||||||||||||||||||| Sbjct: 161938 aagcccctctccctccccctc 161958
>gb|AC150788.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0073C10, complete sequence Length = 165350 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 20 tttccccttcctcctcccacc 40 ||||||||||||||||||||| Sbjct: 104779 tttccccttcctcctcccacc 104799
>gb|AC131743.3| Mus musculus BAC clone RP23-68K21 from chromosome 13, complete sequence Length = 235930 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 tccctttccccttcctcctcc 36 ||||||||||||||||||||| Sbjct: 168919 tccctttccccttcctcctcc 168899
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 20 tttccccttcctcctcccacc 40 ||||||||||||||||||||| Sbjct: 2475889 tttccccttcctcctcccacc 2475909
>gb|AC158614.5| Mus musculus 10 BAC RP23-76C5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 223468 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 16 tccctttccccttcctcctcccacc 40 ||||||||||||||| ||||||||| Sbjct: 84482 tccctttccccttccccctcccacc 84458
>gb|AC122013.4| Mus musculus BAC clone RP24-357P7 from chromosome 12, complete sequence Length = 175788 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 17 ccctttccccttcctcctccc 37 ||||||||||||||||||||| Sbjct: 102093 ccctttccccttcctcctccc 102113
>gb|AC121908.3| Mus musculus BAC clone RP24-176J10 from chromosome 3, complete sequence Length = 162777 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 tccctttccccttcctcctcc 36 ||||||||||||||||||||| Sbjct: 69500 tccctttccccttcctcctcc 69480
>gb|DQ447022.1| Arabidopsis thaliana clone pENTR221-At5g40645 nitrate-responsive NOI protein (At5g40645) mRNA, complete cds Length = 222 Score = 42.1 bits (21), Expect = 2.0 Identities = 48/57 (84%) Strand = Plus / Plus Query: 148 tttggcgaatgggacgtcaacgacccagcttctgctgatggattcacagttatattc 204 ||||| ||||||||||| ||||| ||||| || || || ||||| || ||||||||| Sbjct: 52 tttggagaatgggacgtgaacgatccagcatcagccgaaggatttacggttatattc 108
>emb|AL138899.23| Human DNA sequence from clone RP11-404O13 on chromosome 1 Contains two novel genes, a elongation factor RNA polymerase II 2 (ELL2) pseudogene, the CD1D gene for CD1D antigen, d polypeptide and a ribosomal protein S10 (RPS10) pseudogene, complete sequence Length = 134137 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 cagaagaagaatggttgggaa 397 ||||||||||||||||||||| Sbjct: 22069 cagaagaagaatggttgggaa 22089
>emb|AL138649.1|ATT14D3 Arabidopsis thaliana DNA chromosome 3, BAC clone T14D3 Length = 88010 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 408 tttaattttgctatatacata 428 ||||||||||||||||||||| Sbjct: 34495 tttaattttgctatatacata 34515
>gb|AF312994.1|AF312994 Mus musculus chromosome 1 clone MML, complete sequence Length = 228283 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 16 tccctttccccttcctcctcc 36 ||||||||||||||||||||| Sbjct: 80659 tccctttccccttcctcctcc 80639
>gb|AC073524.13|AC073524 Homo sapiens X BAC RP11-637N21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 58198 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 tccctttccccttcctcctcc 36 ||||||||||||||||||||| Sbjct: 8148 tccctttccccttcctcctcc 8168
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 20 tttccccttcctcctcccacc 40 ||||||||||||||||||||| Sbjct: 3906892 tttccccttcctcctcccacc 3906912
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 20 tttccccttcctcctcccacc 40 ||||||||||||||||||||| Sbjct: 2475999 tttccccttcctcctcccacc 2476019
>gb|AC154811.2| Mus musculus BAC clone RP24-531D17 from chromosome 14, complete sequence Length = 167122 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 10 tccccgtccctttccccttcctcct 34 ||||| ||||||||||||||||||| Sbjct: 96154 tccccctccctttccccttcctcct 96130
>gb|AC119796.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1172F09, complete sequence Length = 106057 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 20 tttccccttcctcctcccacc 40 ||||||||||||||||||||| Sbjct: 48385 tttccccttcctcctcccacc 48405
>gb|AC120860.7| Mus musculus chromosome 1, clone RP23-26I10, complete sequence Length = 188326 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 16 tccctttccccttcctcctcc 36 ||||||||||||||||||||| Sbjct: 24293 tccctttccccttcctcctcc 24313
>dbj|AB009052.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNF13 Length = 85992 Score = 42.1 bits (21), Expect = 2.0 Identities = 48/57 (84%) Strand = Plus / Minus Query: 148 tttggcgaatgggacgtcaacgacccagcttctgctgatggattcacagttatattc 204 ||||| ||||||||||| ||||| ||||| || || || ||||| || ||||||||| Sbjct: 55470 tttggagaatgggacgtgaacgatccagcatcagccgaaggatttacggttatattc 55414
>emb|AL135818.3|CNS01DVH Human chromosome 14 DNA sequence BAC C-2547L24 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 203777 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 57 ttcccccaagcccctctccctcccc 81 |||||||| |||||||||||||||| Sbjct: 181226 ttcccccaggcccctctccctcccc 181202
>emb|AL133153.3|CNS01DU3 Human chromosome 14 DNA sequence BAC R-895M11 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 231490 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 57 ttcccccaagcccctctccctcccc 81 |||||||| |||||||||||||||| Sbjct: 92768 ttcccccaggcccctctccctcccc 92744
>emb|AL606929.13| Mouse DNA sequence from clone RP23-139J21 on chromosome 4, complete sequence Length = 198728 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 17 ccctttccccttcctcctccc 37 ||||||||||||||||||||| Sbjct: 122244 ccctttccccttcctcctccc 122224
>gb|CP000078.1| Leishmania major strain Friedlin chromosome 2, complete sequence Length = 355714 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 gcccctctccctccccctcg 85 |||||||||||||||||||| Sbjct: 109571 gcccctctccctccccctcg 109590 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 66 gcccctctccctccccctcg 85 |||||||||||||||||||| Sbjct: 89917 gcccctctccctccccctcg 89936
>gb|AC115793.14| Mus musculus chromosome 9, clone RP23-400G18, complete sequence Length = 199109 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 16 tccctttccccttcctcctcccac 39 ||||| |||||||||||||||||| Sbjct: 47709 tccctatccccttcctcctcccac 47732
>gb|AC109249.17| Mus musculus chromosome 13, clone RP23-78E1, complete sequence Length = 203574 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 agcccctctccctccccctc 84 |||||||||||||||||||| Sbjct: 196523 agcccctctccctccccctc 196542
>gb|AC125688.6| Rattus norvegicus 20 BAC CH230-186I2 (Children's Hospital Oakland Research Institute) complete sequence Length = 209618 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 tccctttccccttcctcctc 35 |||||||||||||||||||| Sbjct: 115280 tccctttccccttcctcctc 115299
>gb|AC113720.6| Rattus norvegicus 1 BAC CH230-117B1 (Children's Hospital Oakland Research Institute) complete sequence Length = 249629 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 58 tcccccaagcccctctccctcccc 81 |||||| ||||||||||||||||| Sbjct: 134239 tccccctagcccctctccctcccc 134262
>gb|AY297781.1| Alcaligenes faecalis strain NCIB 8687 arsenite oxidation genes, partial sequence Length = 71383 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 17 ccctttccccttcctcctcccacc 40 |||||||||||||||||| ||||| Sbjct: 3290 ccctttccccttcctcctgccacc 3313
>gb|AC155230.2| Mus musculus BAC clone RP24-335J14 from chromosome 12, complete sequence Length = 135049 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 10 tccccgtccctttccccttcctcctccc 37 ||||| |||| ||||||||||||||||| Sbjct: 92527 tccccctccccttccccttcctcctccc 92554
>gb|AC006028.3| Homo sapiens BAC clone GS1-165O14 from 7, complete sequence Length = 210608 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 23 ccccttcctcctcccaccagcagc 46 |||||||||||| ||||||||||| Sbjct: 195171 ccccttcctcctgccaccagcagc 195148
>gb|AC112150.4| Mus musculus BAC clone RP24-84I17 from chromosome 16, complete sequence Length = 211640 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 ccttcctcctcccaccagca 44 |||||||||||||||||||| Sbjct: 136307 ccttcctcctcccaccagca 136288
>gb|AC127358.3| Mus musculus BAC clone RP23-109B9 from chromosome 18, complete sequence Length = 162003 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 10 tccccgtccctttccccttcctcctccc 37 ||||| |||| ||||||||||||||||| Sbjct: 110960 tccccttccccttccccttcctcctccc 110933
>gb|AC122214.4| Mus musculus BAC clone RP23-104J10 from chromosome 7, complete sequence Length = 176054 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 gccaagtcctacacaatctt 355 |||||||||||||||||||| Sbjct: 7145 gccaagtcctacacaatctt 7126
>gb|BC014806.1| Mus musculus cDNA sequence BC023486, mRNA (cDNA clone IMAGE:4237171), containing frame-shift errors Length = 1595 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 tttccccttcctcctcccac 39 |||||||||||||||||||| Sbjct: 274 tttccccttcctcctcccac 293
>gb|AC125223.3| Mus musculus BAC clone RP23-31C10 from 13, complete sequence Length = 221903 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 502 gtgtttgtatgtatggtgtg 521 |||||||||||||||||||| Sbjct: 33358 gtgtttgtatgtatggtgtg 33377
>gb|AC099930.11| Mus musculus chromosome 7, clone RP23-17C12, complete sequence Length = 224617 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 gccaagtcctacacaatctt 355 |||||||||||||||||||| Sbjct: 181014 gccaagtcctacacaatctt 180995
>gb|BC039766.1| Mus musculus cDNA sequence BC023486, mRNA (cDNA clone IMAGE:4159060), partial cds Length = 1598 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 tttccccttcctcctcccac 39 |||||||||||||||||||| Sbjct: 278 tttccccttcctcctcccac 297
>emb|BX511035.7| Human DNA sequence from clone RP11-435J19 on chromosome 22, complete sequence Length = 70823 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 ccccaagcccctctccctcc 79 |||||||||||||||||||| Sbjct: 8487 ccccaagcccctctccctcc 8506
>emb|AL928580.4| Human DNA sequence from clone RP11-199F9 on chromosome 10 Contains part of the gene for a novel protein similar to mannose receptor C type 1 (MRC1), complete sequence Length = 63525 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 ccctttccccttcctcctcc 36 |||||||||||||||||||| Sbjct: 29513 ccctttccccttcctcctcc 29532
>gb|AC012391.10| Homo sapiens chromosome 10 clone RP11-162A23, complete sequence Length = 181948 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 505 tttgtatgtatggtgtgagg 524 |||||||||||||||||||| Sbjct: 2297 tttgtatgtatggtgtgagg 2278
>emb|AL355310.20| Human DNA sequence from clone RP5-1160K1 on chromosome 1 Contains the GPR61 gene for G protein-coupled receptor 61, the GNAI3 gene for guanine nucleotide binding protein (G protein) alpha inhibiting activity polypeptide 3, two novel genes, the GNAT2 gene for guanine nucleotide binding protein (G protein) alpha transducing activity polypeptide 2, the AMPD2 gene for adenosine monophosphate deaminase 2 (isoform L) and the 5' end of a ribosomal protein L7 (RPL7) pseudogene, complete sequence Length = 112911 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 tccccttcctcctcccacca 41 |||||||||||||||||||| Sbjct: 7562 tccccttcctcctcccacca 7543
>emb|AL161732.7| Human DNA sequence from clone RP11-52I12 on chromosome 9 Contains the 3' end of the TMEM2 gene for transmembrane protein 2, complete sequence Length = 137391 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 10 tccccgtccctttccccttcctcc 33 ||||| |||||||||||||||||| Sbjct: 131782 tccccttccctttccccttcctcc 131759
>emb|AL021919.4|HS1045J21 Human DNA sequence from clone RP5-1045J21 on chromosome 1q23.3-24.3 Contains part of the TNR gene for tenascin R (restrictin, janusin), a novel gene and one CpG island, complete sequence Length = 138636 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 gatgagaaaaaggctgggaa 236 |||||||||||||||||||| Sbjct: 101027 gatgagaaaaaggctgggaa 101046
>gb|AC118290.7| Rattus norvegicus 2 BAC CH230-366D18 (Children's Hospital Oakland Research Institute) complete sequence Length = 210896 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 58 tcccccaagcccctctccctcccc 81 |||||| ||||||||||||||||| Sbjct: 91012 tccccctagcccctctccctcccc 91035
>gb|AC162287.4| Mus musculus chromosome 7, clone RP24-243J4, complete sequence Length = 152934 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 tttccccttcctcctcccac 39 |||||||||||||||||||| Sbjct: 84646 tttccccttcctcctcccac 84665
>emb|AL683873.14| Mouse DNA sequence from clone RP23-119G22 on chromosome 13 Contains part of a novel gene, complete sequence Length = 104602 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 10 tccccgtccctttccccttcctcctccc 37 ||||| |||| ||||||||||||||||| Sbjct: 103881 tccccttccccttccccttcctcctccc 103854
>emb|AL031883.1|DMC11F6 Drosophila melanogaster cosmid clone 11F6 Length = 36000 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 61 cccaagcccctctccctccccctc 84 |||||||||||| ||||||||||| Sbjct: 7367 cccaagcccctccccctccccctc 7344
>emb|AL954258.2| Pan troglodytes chromosome 22 clone PTB-146D01 map 22q22.3, complete sequence Length = 185080 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 396 aaagtatggtcgtttaattttgctatat 423 |||| |||| |||||||||||||||||| Sbjct: 14568 aaagaatgggcgtttaattttgctatat 14595
>emb|AL844182.10| Mouse DNA sequence from clone RP23-399H17 on chromosome 4, complete sequence Length = 201590 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 376 ccagaagaagaatggttgggaaag 399 ||||| |||||||||||||||||| Sbjct: 111505 ccagaggaagaatggttgggaaag 111528
>emb|AL589744.18| Mouse DNA sequence from clone RP23-80C18 on chromosome 13 Contains a nove gene, a ribosomal protein large p1 (Rplp1) pseudogene and the Cmah gene for CMP-N-Acetylneuraminic acid hydroxylase, complete sequence Length = 216800 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 502 gtgtttgtatgtatggtgtg 521 |||||||||||||||||||| Sbjct: 158287 gtgtttgtatgtatggtgtg 158268
>emb|AL590625.16| Mouse DNA sequence from clone RP23-467M8 on chromosome 13 Contains the Foxf2 gene for forkhead box F2, a novel gene and two CpG islands, complete sequence Length = 165745 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 14 cgtccctttccccttcctcctccc 37 |||||||||| ||||||||||||| Sbjct: 45810 cgtccctttctccttcctcctccc 45833
>emb|AL590864.12| Mouse DNA sequence from clone RP23-96E5 on chromosome 13 contains two novel genes, ribosomal protein L17 (Rpl17), S19 (Rps19) and L27A (Rpl27a) pseudogenes and a CpG island, complete sequence Length = 196857 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 10 tccccgtccctttccccttcctcctccc 37 ||||| |||| ||||||||||||||||| Sbjct: 1279 tccccttccccttccccttcctcctccc 1252
>gb|AC069023.5| Homo sapiens chromosome 10 clone RP11-457D2, complete sequence Length = 131345 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 ccctttccccttcctcctcc 36 |||||||||||||||||||| Sbjct: 96752 ccctttccccttcctcctcc 96733
>gb|AC105774.8| Drosophila melanogaster X BAC RP98-8O5 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 170186 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 61 cccaagcccctctccctccccctc 84 |||||||||||| ||||||||||| Sbjct: 168436 cccaagcccctccccctccccctc 168413
>gb|AC092859.26| Pan troglodytes clone rp43-111m15, complete sequence Length = 175281 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 tccccttcctcctcccacca 41 |||||||||||||||||||| Sbjct: 138759 tccccttcctcctcccacca 138778
>gb|AC006201.4| Arabidopsis thaliana chromosome 2 clone T27K22 map c245, complete sequence Length = 88149 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 tcaatccatgtcggaggaat 127 |||||||||||||||||||| Sbjct: 15343 tcaatccatgtcggaggaat 15324
>gb|AC104602.3| Drosophila melanogaster X BAC RP98-16G6 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 161668 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 61 cccaagcccctctccctccccctc 84 |||||||||||| ||||||||||| Sbjct: 54872 cccaagcccctccccctccccctc 54849
>gb|AC104829.4| Homo sapiens BAC clone RP11-810F7 from 4, complete sequence Length = 65992 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 9 atccccgtccctttccccttcctcctcc 36 |||||| | ||||||||||||||||||| Sbjct: 43790 atccccttacctttccccttcctcctcc 43763
>emb|BX465229.7| Zebrafish DNA sequence from clone CH211-174D2 in linkage group 2, complete sequence Length = 154954 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 taattttgctatatacatac 429 |||||||||||||||||||| Sbjct: 123301 taattttgctatatacatac 123320
>gb|AC105061.16| Mus musculus chromosome 19, clone RP23-117I10, complete sequence Length = 210038 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 502 gtgtttgtatgtatggtgtg 521 |||||||||||||||||||| Sbjct: 127461 gtgtttgtatgtatggtgtg 127480
>gb|AC121099.8| Mus musculus chromosome 3, clone RP24-501F21, complete sequence Length = 157318 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 ctttccccttcctcctccca 38 |||||||||||||||||||| Sbjct: 84901 ctttccccttcctcctccca 84920
>gb|AC022267.8|AC022267 Homo sapiens BAC clone RP11-407H18 from 4, complete sequence Length = 199472 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 ggatgagaaaaaggctggga 235 |||||||||||||||||||| Sbjct: 168963 ggatgagaaaaaggctggga 168944
>emb|BX324002.8| Zebrafish DNA sequence from clone CH211-129H21 in linkage group 24, complete sequence Length = 178173 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 192 cacagttatattcaacaaag 211 |||||||||||||||||||| Sbjct: 120384 cacagttatattcaacaaag 120365
>gb|AC007614.7| Homo sapiens chromosome 16 clone RP11-491F9, complete sequence Length = 192347 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 ccccttcctcctcccaccag 42 |||||||||||||||||||| Sbjct: 74663 ccccttcctcctcccaccag 74644
>gb|AC138374.2| Homo sapiens chromosome 11, clone CTD-2647G13, complete sequence Length = 196424 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 ccaagcccctctccctcccc 81 |||||||||||||||||||| Sbjct: 137875 ccaagcccctctccctcccc 137856
>gb|AC099860.13| Mus musculus chromosome 1, clone RP23-5C23, complete sequence Length = 230538 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 ccctttccccttcctcctcc 36 |||||||||||||||||||| Sbjct: 74862 ccctttccccttcctcctcc 74843
>gb|AC004801.2| Homo sapiens 12 PAC RP1-228P16 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 193775 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 16 tccctttccccttcctcctcccaccagc 43 ||||||||| |||||||||||| ||||| Sbjct: 162518 tccctttccacttcctcctccctccagc 162491
>gb|AY230143.1| Leishmania major clone B2015 phosphoglycan beta 1,2 arabinosyltransferase 1 (SCA1) gene, complete cds Length = 3185 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 gcccctctccctccccctcg 85 |||||||||||||||||||| Sbjct: 2853 gcccctctccctccccctcg 2834
>dbj|BA000031.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 1, complete sequence Length = 3288558 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 364 caagctgccaccccagaagaagaa 387 ||||| |||||||||||||||||| Sbjct: 2937198 caagcagccaccccagaagaagaa 2937175
>gb|AC131934.13| Homo sapiens chromosome 11, clone RP11-754B17, complete sequence Length = 154813 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 ccaagcccctctccctcccc 81 |||||||||||||||||||| Sbjct: 128912 ccaagcccctctccctcccc 128931
>gb|AF434264.1| Salmo trutta clone 64 internal transcribed spacer 1, complete sequence Length = 575 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 cctctccctccccctcggcg 88 |||||||||||||||||||| Sbjct: 90 cctctccctccccctcggcg 109
>gb|AF434263.1| Salmo trutta clone 76 internal transcribed spacer 1, complete sequence Length = 575 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 cctctccctccccctcggcg 88 |||||||||||||||||||| Sbjct: 90 cctctccctccccctcggcg 109
>gb|AF434262.1| Salmo trutta clone 75 internal transcribed spacer 1, complete sequence Length = 575 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 cctctccctccccctcggcg 88 |||||||||||||||||||| Sbjct: 90 cctctccctccccctcggcg 109
>gb|AF434261.1| Salmo trutta clone 74 internal transcribed spacer 1, complete sequence Length = 575 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 cctctccctccccctcggcg 88 |||||||||||||||||||| Sbjct: 90 cctctccctccccctcggcg 109
>gb|AF434260.1| Salmo trutta clone 53 internal transcribed spacer 1, complete sequence Length = 575 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 cctctccctccccctcggcg 88 |||||||||||||||||||| Sbjct: 90 cctctccctccccctcggcg 109
>gb|AF434259.1| Salmo trutta clone 68 internal transcribed spacer 1, complete sequence Length = 575 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 cctctccctccccctcggcg 88 |||||||||||||||||||| Sbjct: 90 cctctccctccccctcggcg 109
>gb|AF434258.1| Salmo trutta clone 52 internal transcribed spacer 1, complete sequence Length = 575 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 cctctccctccccctcggcg 88 |||||||||||||||||||| Sbjct: 90 cctctccctccccctcggcg 109
>gb|AF434257.1| Salmo trutta clone 55 internal transcribed spacer 1, complete sequence Length = 575 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 cctctccctccccctcggcg 88 |||||||||||||||||||| Sbjct: 90 cctctccctccccctcggcg 109
>gb|AF434256.1| Salmo trutta clone 51 internal transcribed spacer 1, complete sequence Length = 575 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 cctctccctccccctcggcg 88 |||||||||||||||||||| Sbjct: 90 cctctccctccccctcggcg 109
>gb|AC107815.11| Mus musculus chromosome 7, clone RP23-114A6, complete sequence Length = 228068 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 tttccccttcctcctcccac 39 |||||||||||||||||||| Sbjct: 18551 tttccccttcctcctcccac 18532
>gb|BC087948.1| Mus musculus cDNA sequence BC023486, mRNA (cDNA clone IMAGE:30122298) Length = 1631 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 tttccccttcctcctcccac 39 |||||||||||||||||||| Sbjct: 258 tttccccttcctcctcccac 277
>emb|AL163302.2|HS21C102 Homo sapiens chromosome 21 segment HS21C102 Length = 340000 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 396 aaagtatggtcgtttaattttgctatat 423 |||| |||| |||||||||||||||||| Sbjct: 96469 aaagaatgggcgtttaattttgctatat 96496
>emb|CR937049.3| CH230-323M7, complete sequence Length = 198674 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 58 tcccccaagcccctctccctcccc 81 |||||| ||||||||||||||||| Sbjct: 28787 tccccctagcccctctccctcccc 28810
>dbj|AP006284.2| Homo sapiens genomic DNA, chromosome 11 clone:RP11-496I9, complete sequence Length = 104658 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 62 ccaagcccctctccctcccc 81 |||||||||||||||||||| Sbjct: 80402 ccaagcccctctccctcccc 80383
>gb|AE003418.4| Drosophila melanogaster chromosome X, section 2 of 74 of the complete sequence Length = 315092 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 61 cccaagcccctctccctccccctc 84 |||||||||||| ||||||||||| Sbjct: 38239 cccaagcccctccccctccccctc 38216
>gb|AC145082.10| Mus musculus chromosome 3, clone RP24-333B11, complete sequence Length = 168482 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 ccctttccccttcctcctcc 36 |||||||||||||||||||| Sbjct: 74467 ccctttccccttcctcctcc 74448
>gb|L10347.1|HUMCOL2A1Z Human pro-alpha1 type II collagen (COL2A1) gene exons 1-54, complete cds Length = 31001 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 16 tccctttccccttcctcctcccaccagc 43 ||||||||| |||||||||||| ||||| Sbjct: 27745 tccctttccacttcctcctccctccagc 27718
>emb|AL772305.15| Mouse DNA sequence from clone RP23-86E8 on chromosome 4, complete sequence Length = 260935 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 10 tccccgtccctttccccttcctcctccc 37 ||||| |||| ||||||||||||||||| Sbjct: 252595 tccccctccccttccccttcctcctccc 252568
>emb|BX322562.1|HSQ21A11 Homo sapiens chromosome 21 from cosmid LL21NC02-21A1 map 21q22.3 region D21S171-LA161, complete sequence Length = 45600 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 396 aaagtatggtcgtttaattttgctatat 423 |||| |||| |||||||||||||||||| Sbjct: 14933 aaagaatgggcgtttaattttgctatat 14960
>emb|CT010517.11| Mouse DNA sequence from clone RP23-357P12 on chromosome 16, complete sequence Length = 188228 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 ccttcctcctcccaccagca 44 |||||||||||||||||||| Sbjct: 21927 ccttcctcctcccaccagca 21946
>gb|AC147631.3| Mus musculus BAC clone RP23-341H6 from 9, complete sequence Length = 169769 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 10 tccccgtccctttccccttcctcctccc 37 ||||| ||||||||||||||| |||||| Sbjct: 112302 tccccatccctttccccttccccctccc 112329
>emb|CR962122.2| Medicago truncatula chromosome 5 clone mte1-46l20, COMPLETE SEQUENCE Length = 150486 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 396 aaagtatggtcgtttaattttgct 419 |||||||| ||||||||||||||| Sbjct: 70524 aaagtatgatcgtttaattttgct 70547
>emb|CT010439.6| Mouse DNA sequence from clone RP23-26E8 on chromosome 13, complete sequence Length = 231247 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 65 agcccctctccctccccctc 84 |||||||||||||||||||| Sbjct: 44804 agcccctctccctccccctc 44823
>dbj|AP006701.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT08P04, TM0587, complete sequence Length = 110885 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 371 ccaccccagaagaagaatggttgg 394 |||| ||||||||||||||||||| Sbjct: 64460 ccacaccagaagaagaatggttgg 64483
>emb|AL929506.8| Mouse DNA sequence from clone RP23-223I8 on chromosome 4, complete sequence Length = 63478 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 389 ggttgggaaagtatggtcgtttaa 412 ||||||||||||||||| |||||| Sbjct: 60491 ggttgggaaagtatggtggtttaa 60468
>emb|AL807390.11| Mouse DNA sequence from clone RP23-223F2 on chromosome 4, complete sequence Length = 150847 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 10 tccccgtccctttccccttcctcctccc 37 ||||| ||| |||||||||||||||||| Sbjct: 12064 tccccttccttttccccttcctcctccc 12091
>emb|AL928832.7| Mouse DNA sequence from clone RP23-261N18 on chromosome 2, complete sequence Length = 198993 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 10 tccccgtccctttccccttcctcctccc 37 ||||| |||| ||||||||||||||||| Sbjct: 169742 tccccttccccttccccttcctcctccc 169715
>gb|J00116.1|HUMCG2A1 Human alpha-1(II) collagen gene COL2A1, partial cds Length = 4845 Score = 40.1 bits (20), Expect = 7.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 16 tccctttccccttcctcctcccaccagc 43 ||||||||| |||||||||||| ||||| Sbjct: 1363 tccctttccacttcctcctccctccagc 1336 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,810,748 Number of Sequences: 3902068 Number of extensions: 5810748 Number of successful extensions: 154552 Number of sequences better than 10.0: 144 Number of HSP's better than 10.0 without gapping: 144 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 153883 Number of HSP's gapped (non-prelim): 666 length of query: 574 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 551 effective length of database: 17,143,297,704 effective search space: 9445957034904 effective search space used: 9445957034904 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
