ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd22p16 |
|---|---|
| Clone Library Name | barley_pub |
>IMDH_METJA (Q59011) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP| dehydrogenase) (IMPDH) (IMPD) Length = 496 Score = 46.6 bits (109), Expect = 6e-05 Identities = 25/68 (36%), Positives = 36/68 (52%) Frame = +3 Query: 414 VSGLPVVDSARRCVGVVVKSDRARASHGSRTKIADVMTSPAITLSCDKTVTDAAALMLKK 593 +SGLPVVD+ + VG++ D +A K+ DVMT + D +A LM Sbjct: 121 ISGLPVVDNEDKLVGIITHRD-VKAIEDKTKKVKDVMTKDVVCAKEDVEEEEALELMYAN 179 Query: 594 KIHRLPIV 617 ++ RLPIV Sbjct: 180 RVERLPIV 187
>Y1426_METJA (Q58821) Hypothetical protein MJ1426| Length = 168 Score = 46.2 bits (108), Expect = 8e-05 Identities = 35/134 (26%), Positives = 58/134 (43%), Gaps = 38/134 (28%) Frame = +3 Query: 330 LLREAMSTPVLMATADQALVEVEGHFQL--VSGLPVVDSARRCVGVVVKSDRARA----- 488 L+++ M P+++ D L++V F+ +SG PV++ + VG++ +SD + Sbjct: 16 LIKDIMKKPIVVYE-DNDLIDVIRLFRKNKISGAPVLNKDGKLVGIISESDIVKTIVTHN 74 Query: 489 -------------------------------SHGSRTKIADVMTSPAITLSCDKTVTDAA 575 + +TK+ DVMT I D T+ DAA Sbjct: 75 EDLNLILPSPLDLIELPLKTALKIEEFMEDLKNALKTKVRDVMTRKVIVAKPDMTINDAA 134 Query: 576 ALMLKKKIHRLPIV 617 LM+K I RLP+V Sbjct: 135 KLMVKNNIKRLPVV 148
>Y100_METJA (Q57564) Hypothetical protein MJ0100| Length = 509 Score = 43.1 bits (100), Expect = 6e-04 Identities = 27/98 (27%), Positives = 51/98 (52%), Gaps = 2/98 (2%) Frame = +3 Query: 330 LLREAMSTPVLMATADQALVEVEGHF--QLVSGLPVVDSARRCVGVVVKSDRARASHGSR 503 L+++ +S P + A ++ +++E ++ LP+VD + VG++ D A+A ++ Sbjct: 389 LVKDILSKPPITAHSNISIMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIAKALAQNK 448 Query: 504 TKIADVMTSPAITLSCDKTVTDAAALMLKKKIHRLPIV 617 I ++MT IT D+ V A M K I +P+V Sbjct: 449 KTIEEIMTRNVITAHEDEPVDHVAIKMSKYNISGVPVV 486 Score = 34.3 bits (77), Expect = 0.30 Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 2/59 (3%) Frame = +3 Query: 333 LREAMSTPVLMATADQAL--VEVEGHFQLVSGLPVVDSARRCVGVVVKSDRARASHGSR 503 + E M+ V+ A D+ + V ++ +SG+PVVD RR VG+V D +R G + Sbjct: 451 IEEIMTRNVITAHEDEPVDHVAIKMSKYNISGVPVVDDYRRVVGIVTSEDISRLFGGKK 509
>IMDH_HELPY (P56088) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP| dehydrogenase) (IMPDH) (IMPD) Length = 481 Score = 43.1 bits (100), Expect = 6e-04 Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 1/69 (1%) Frame = +3 Query: 414 VSGLPVVDSARRCVGVVVKSDRARASHGSRTKIADVMTS-PAITLSCDKTVTDAAALMLK 590 +SG+PVVD +G++ D R K+ DVMT P +T ++ +A+ LM K Sbjct: 117 ISGVPVVDDKGLLIGILTNRD-VRFETDLSKKVGDVMTKMPLVTAHVGISLDEASDLMHK 175 Query: 591 KKIHRLPIV 617 KI +LPIV Sbjct: 176 HKIEKLPIV 184
>IMDH_HELPJ (Q9ZL14) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP| dehydrogenase) (IMPDH) (IMPD) Length = 481 Score = 43.1 bits (100), Expect = 6e-04 Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 1/69 (1%) Frame = +3 Query: 414 VSGLPVVDSARRCVGVVVKSDRARASHGSRTKIADVMTS-PAITLSCDKTVTDAAALMLK 590 +SG+PVVD +G++ D R K+ DVMT P +T ++ +A+ LM K Sbjct: 117 ISGVPVVDDKGLLIGILTNRD-VRFETDLSKKVGDVMTKMPLVTAHVGISLDEASDLMHK 175 Query: 591 KKIHRLPIV 617 KI +LPIV Sbjct: 176 HKIEKLPIV 184
>IMDH_MYCTU (P65167) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP| dehydrogenase) (IMPDH) (IMPD) Length = 529 Score = 42.0 bits (97), Expect = 0.001 Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 4/95 (4%) Frame = +3 Query: 345 MSTPVLMATADQALVEVEG---HFQLVSGLPVVDSARRCVGVVVKSDRARASHGSRTKIA 515 M T + D L +V+ F+ +SGLPVVD VG++ D R ++A Sbjct: 129 MVTDPVTCRPDNTLAQVDALCARFR-ISGLPVVDDDGALVGIITNRD-MRFEVDQSKQVA 186 Query: 516 DVMT-SPAITLSCDKTVTDAAALMLKKKIHRLPIV 617 +VMT +P IT + + A L+ + KI +LP+V Sbjct: 187 EVMTKAPLITAQEGVSASAALGLLRRNKIEKLPVV 221
>IMDH_MYCBO (P65168) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP| dehydrogenase) (IMPDH) (IMPD) Length = 529 Score = 42.0 bits (97), Expect = 0.001 Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 4/95 (4%) Frame = +3 Query: 345 MSTPVLMATADQALVEVEG---HFQLVSGLPVVDSARRCVGVVVKSDRARASHGSRTKIA 515 M T + D L +V+ F+ +SGLPVVD VG++ D R ++A Sbjct: 129 MVTDPVTCRPDNTLAQVDALCARFR-ISGLPVVDDDGALVGIITNRD-MRFEVDQSKQVA 186 Query: 516 DVMT-SPAITLSCDKTVTDAAALMLKKKIHRLPIV 617 +VMT +P IT + + A L+ + KI +LP+V Sbjct: 187 EVMTKAPLITAQEGVSASAALGLLRRNKIEKLPVV 221
>YE45_SCHPO (O13965) Hypothetical protein C24C9.05c in chromosome I| Length = 730 Score = 41.2 bits (95), Expect = 0.002 Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 1/101 (0%) Frame = +3 Query: 318 HRGALLREAMSTPVLMATADQ-ALVEVEGHFQLVSGLPVVDSARRCVGVVVKSDRARASH 494 H +L+ E T LMA Q ++ V+ QL + D A RCVG + + Sbjct: 77 HMQSLVTE---TAQLMAAKRQNCVLVVDDDEQLAGIVTATDIATRCVGAGLNA------- 126 Query: 495 GSRTKIADVMTSPAITLSCDKTVTDAAALMLKKKIHRLPIV 617 +T IAD+M++ + ++ D DA LM++ K LP+V Sbjct: 127 -RQTLIADIMSTSPLCITSDTRFDDALLLMIEHKFRHLPVV 166
>IMDH_MYCLE (Q49729) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP| dehydrogenase) (IMPDH) (IMPD) Length = 529 Score = 40.8 bits (94), Expect = 0.003 Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 1/69 (1%) Frame = +3 Query: 414 VSGLPVVDSARRCVGVVVKSDRARASHGSRTKIADVMTSPAITLSCDKTVTDAA-ALMLK 590 +SGLPVVD + G++ D R ++A+VMT + + + DAA L+ + Sbjct: 154 ISGLPVVDDSGALAGIITNRD-MRFEVDQSKQVAEVMTKTPLITAAEGVSADAALGLLRR 212 Query: 591 KKIHRLPIV 617 KI +LP+V Sbjct: 213 NKIEKLPVV 221
>Y922_METJA (Q58332) Hypothetical protein MJ0922| Length = 138 Score = 40.8 bits (94), Expect = 0.003 Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 11/113 (9%) Frame = +3 Query: 312 DQHRGALLREAMSTPVLMATADQALVEVEGHF--QLVSGLPVVDSARRCVGVVVKSD--- 476 D + +++ M+ V+ A + +VE +S LPV+D + +G+V +D Sbjct: 3 DTLKNIKVKDVMTKNVITAKRHEGVVEAFEKMLKYKISSLPVIDDENKVIGIVTTTDIGY 62 Query: 477 -RARASHGSRTKIADVMTSPAITLSCDKTVTDAAALM-----LKKKIHRLPIV 617 R + T I DVMT IT+ D ++ +A M ++ I++LP+V Sbjct: 63 NLIRDKYTLETTIGDVMTKDVITIHEDASILEAIKKMDISGKKEEIINQLPVV 115
>IMDH_BACHD (Q9KGN8) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP| dehydrogenase) (IMPDH) (IMPD) Length = 485 Score = 40.8 bits (94), Expect = 0.003 Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 1/69 (1%) Frame = +3 Query: 414 VSGLPVVDSARRCVGVVVKSDRARASHGSRTKIADVMTSP-AITLSCDKTVTDAAALMLK 590 +SG+P+VD ++ VG++ D R T I DVMT +T T+ +A ++ K Sbjct: 120 ISGVPIVDEDQKLVGILTNRD-LRFIEDYSTLIDDVMTKENLVTAPVGTTLKEAEEILQK 178 Query: 591 KKIHRLPIV 617 KI +LP+V Sbjct: 179 HKIEKLPLV 187
>YBP3_ACIAM (P32987) Hypothetical 17.7 kDa protein in bps2 3'region (ORF3)| Length = 164 Score = 37.4 bits (85), Expect = 0.035 Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 2/85 (2%) Frame = +3 Query: 369 TADQALVEVEGHFQLVSGLPVVDSARRCVGVVVKSD--RARASHGSRTKIADVMTSPAIT 542 T +A E++ H + L V+DS R VG++ + D +A ++ + + MT Sbjct: 21 TIAEAAKEMKEHN--LGSLVVIDSQNRVVGIITERDIVKAASNRDIDSPVEKYMTKDVKG 78 Query: 543 LSCDKTVTDAAALMLKKKIHRLPIV 617 ++ D VTDA +ML LPI+ Sbjct: 79 VTEDTEVTDALDIMLNNGFRHLPII 103
>Y525_METKA (P50100) Hypothetical protein MK0525 (OrfX)| Length = 196 Score = 37.0 bits (84), Expect = 0.046 Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 5/73 (6%) Frame = +3 Query: 414 VSGLPVVDSARRCVGVVVKSDR-----ARASHGSRTKIADVMTSPAITLSCDKTVTDAAA 578 + + +V+ +G++ + D ++ + D+M+ P IT+ D V +A Sbjct: 35 IGSVVIVNEKDEPIGIITERDLVIKVVSQGKNPDEVIARDIMSQPVITVEEDMEVNEAVK 94 Query: 579 LMLKKKIHRLPIV 617 LM+ K I RLPIV Sbjct: 95 LMVDKGIRRLPIV 107
>IMDH_AQUAE (O67820) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP| dehydrogenase) (IMPDH) (IMPD) Length = 490 Score = 35.8 bits (81), Expect = 0.10 Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 2/70 (2%) Frame = +3 Query: 414 VSGLPVVDSARRCVGVVVKSDRARASHGSRTK-IADVMTSP-AITLSCDKTVTDAAALML 587 +SG+PVVD R+ +G++ D +K +++ MT IT T+ +A + Sbjct: 121 ISGVPVVDEERKLIGILTNRDLRFIKPEDYSKPVSEFMTKENLITAPEGITLDEAEEIFR 180 Query: 588 KKKIHRLPIV 617 K KI +LPIV Sbjct: 181 KYKIEKLPIV 190
>YR33_THEPE (P15889) Hypothetical 33.4 kDa protein in ribosomal RNA operon| Length = 300 Score = 35.4 bits (80), Expect = 0.13 Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 2/70 (2%) Frame = +3 Query: 414 VSGLPVVDSARRCVGVVVKSD--RARASHGSRTKIADVMTSPAITLSCDKTVTDAAALML 587 + L VVD R VG+V + A+ + K+ ++MTS + LS ++ + +M Sbjct: 114 IGALAVVDEDLRVVGIVSERHVISLLANVETHVKVKEIMTSEVVYLSPMDSLFEGMRVMS 173 Query: 588 KKKIHRLPIV 617 +++I RLP+V Sbjct: 174 ERRIRRLPLV 183
>YNI1_METIV (P25768) Hypothetical protein in nifH2 5'region (Fragment)| Length = 96 Score = 35.0 bits (79), Expect = 0.18 Identities = 15/36 (41%), Positives = 24/36 (66%) Frame = +3 Query: 510 IADVMTSPAITLSCDKTVTDAAALMLKKKIHRLPIV 617 + ++MT T D +++DAAALM K ++RLP+V Sbjct: 53 VGEIMTKKVRTTKKDASISDAAALMDKHNVNRLPVV 88
>Y1404_METJA (Q58799) Hypothetical protein MJ1404| Length = 421 Score = 34.7 bits (78), Expect = 0.23 Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 4/68 (5%) Frame = +3 Query: 426 PVVDSARRCVGVVVKSD-RARASHGS---RTKIADVMTSPAITLSCDKTVTDAAALMLKK 593 P+V++ + VG++ D ARA+ TK+ +MT IT++ + ++ A ALM Sbjct: 103 PIVNNVGKMVGIITDYDIMARAAKSKIMKDTKVTKIMTRNVITINENDSIGKARALMRDN 162 Query: 594 KIHRLPIV 617 I RL +V Sbjct: 163 NIGRLVVV 170
>AAKG2_PONPY (Q5R4S0) 5'-AMP-activated protein kinase, gamma-2 subunit (AMPK| gamma-2 chain) (AMPK gamma2) Length = 524 Score = 32.3 bits (72), Expect = 1.1 Identities = 12/29 (41%), Positives = 20/29 (68%) Frame = +3 Query: 531 PAITLSCDKTVTDAAALMLKKKIHRLPIV 617 P + +S D ++ DA ++K KIHRLP++ Sbjct: 315 PLVNISPDASLLDAVYSLIKNKIHRLPVI 343
>AAKG2_MOUSE (Q91WG5) 5'-AMP-activated protein kinase, gamma-2 subunit (AMPK| gamma-2 chain) (AMPK gamma2) Length = 566 Score = 32.0 bits (71), Expect = 1.5 Identities = 12/29 (41%), Positives = 20/29 (68%) Frame = +3 Query: 531 PAITLSCDKTVTDAAALMLKKKIHRLPIV 617 P + +S D ++ DA ++K KIHRLP++ Sbjct: 357 PLVNISPDASLFDAVYSLIKNKIHRLPVI 385
>AAKG2_HUMAN (Q9UGJ0) 5'-AMP-activated protein kinase, gamma-2 subunit (AMPK| gamma-2 chain) (AMPK gamma2) (H91620p) Length = 569 Score = 32.0 bits (71), Expect = 1.5 Identities = 12/29 (41%), Positives = 20/29 (68%) Frame = +3 Query: 531 PAITLSCDKTVTDAAALMLKKKIHRLPIV 617 P + +S D ++ DA ++K KIHRLP++ Sbjct: 360 PLVNISPDASLFDAVYSLIKNKIHRLPVI 388
>VGLX_EHV1B (P28968) Glycoprotein X precursor| Length = 797 Score = 31.6 bits (70), Expect = 1.9 Identities = 28/91 (30%), Positives = 36/91 (39%), Gaps = 7/91 (7%) Frame = -3 Query: 574 AASVTVLSHDSVIAGDVITSAIFVLDPCEALARSLLTTTPTHRRALSTTGRP---DTSWK 404 AA+ T + + T+A A + TTT A +TTG P TS Sbjct: 212 AATTTAATTTAATTSSATTAATTTAATTTAATTTAATTTAATTTAATTTGSPTSGSTSTT 271 Query: 403 CPSTST----SAWSAVAISTGVDMASRRSAP 323 STST +A SA ST A+ S P Sbjct: 272 GASTSTPSASTATSATPTSTSTSAAATTSTP 302
>T3RE_SALTY (P40815) Type III restriction-modification system StyLTI enzyme res| (EC 3.1.21.5) Length = 990 Score = 31.6 bits (70), Expect = 1.9 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%) Frame = +3 Query: 156 GSGLRLGLDENPDAIISGEWPENFS-LLSYDD 248 G GLRL +DEN + EWP S L+ YD+ Sbjct: 534 GRGLRLPVDENGHRVHQEEWPSRLSFLIGYDE 565
>IMDH_TRIFO (P50097) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP| dehydrogenase) (IMPDH) (IMPD) Length = 503 Score = 31.2 bits (69), Expect = 2.5 Identities = 17/57 (29%), Positives = 34/57 (59%), Gaps = 2/57 (3%) Frame = +3 Query: 453 VGVVVKSDRARASHGSRTKIADVMT--SPAITLSCDKTVTDAAALMLKKKIHRLPIV 617 +G+V + D + TK++D+MT S +T D +++A ++ +KK++ LPI+ Sbjct: 144 LGLVTQRDYPIDLTQTETKVSDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPII 200
>IMDH_DROME (Q07152) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP| dehydrogenase) (IMPDH) (IMPD) (Protein raspberry) Length = 537 Score = 30.8 bits (68), Expect = 3.3 Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 3/70 (4%) Frame = +3 Query: 417 SGLPVVDSAR---RCVGVVVKSDRARASHGSRTKIADVMTSPAITLSCDKTVTDAAALML 587 +G PV ++ + + +G+V D + +AD+MT+ +T + A A++ Sbjct: 162 TGYPVTENGKLGGKLLGMVTSRDIDFRENQPEVLLADIMTTELVTAPNGINLPTANAILE 221 Query: 588 KKKIHRLPIV 617 K K +LPIV Sbjct: 222 KSKKGKLPIV 231
>Y1678_HAEIN (P45313) Probable phosphosugar isomerase HI1678 (EC 5.-.-.-)| Length = 337 Score = 30.0 bits (66), Expect = 5.7 Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 5/71 (7%) Frame = +3 Query: 420 GLPVVDSARRCVGVVVKSDRARA----SHGSRTKIA-DVMTSPAITLSCDKTVTDAAALM 584 G+ +V + G++ D RA G+ K A D MTS T+ D+ ++ A M Sbjct: 253 GVALVMENEQLKGIITDGDIRRALTANGAGTLNKTAKDFMTSSPKTIHQDEFLSKAEDFM 312 Query: 585 LKKKIHRLPIV 617 KKIH L +V Sbjct: 313 KAKKIHSLVVV 323
>Y868_METJA (Q58278) Hypothetical protein MJ0868| Length = 127 Score = 30.0 bits (66), Expect = 5.7 Identities = 24/96 (25%), Positives = 43/96 (44%), Gaps = 3/96 (3%) Frame = +3 Query: 330 LLREAMSTPVLMATADQALVEV---EGHFQLVSGLPVVDSARRCVGVVVKSDRARASHGS 500 L+R+ M V+ T D L +V + + S VV G++ +D + + Sbjct: 6 LVRDVMKKGVVEVTLDTKLSDVIKTMAKYDISS--VVVSDGETFWGIITDTDVLKHYNDL 63 Query: 501 RTKIADVMTSPAITLSCDKTVTDAAALMLKKKIHRL 608 ++MT+ IT+S + + A +M +K IH L Sbjct: 64 DKTAEEIMTTNPITVSPEAPLEKAVEIMAEKGIHHL 99
>PORB_METJA (Q57714) Pyruvate synthase subunit porB (EC 1.2.7.1) (Pyruvate| oxidoreductase beta chain) (POR) (Pyruvic-ferredoxin oxidoreductase beta subunit) Length = 298 Score = 30.0 bits (66), Expect = 5.7 Identities = 14/46 (30%), Positives = 25/46 (54%) Frame = -3 Query: 478 RSLLTTTPTHRRALSTTGRPDTSWKCPSTSTSAWSAVAISTGVDMA 341 + + T T + TT P+TSW+ P T+ +A A ++G++ A Sbjct: 37 KDTIITNATGCLEVMTTPYPETSWRVPWIHTAFENAAATASGIEAA 82
>STUB_DROME (Q05319) Serine proteinase stubble (EC 3.4.21.-) (Protein| stubble-stubbloid) [Contains: Serine proteinase stubble non-catalytic chain; Serine proteinase stubble catalytic chain] Length = 787 Score = 30.0 bits (66), Expect = 5.7 Identities = 15/44 (34%), Positives = 24/44 (54%) Frame = -3 Query: 466 TTTPTHRRALSTTGRPDTSWKCPSTSTSAWSAVAISTGVDMASR 335 TTTPT +TT +P ++ P+T+TS+ S S+ +R Sbjct: 426 TTTPTTTTRRTTTNKPTRPYQRPTTATSSSSTSTTSSKTPTTTR 469
>AAKG1_HUMAN (P54619) 5'-AMP-activated protein kinase, gamma-1 subunit (AMPK| gamma-1 chain) (AMPKg) Length = 331 Score = 29.6 bits (65), Expect = 7.4 Identities = 10/29 (34%), Positives = 21/29 (72%) Frame = +3 Query: 531 PAITLSCDKTVTDAAALMLKKKIHRLPIV 617 P + +S + ++ DA + +++ KIHRLP++ Sbjct: 128 PLVCISPNASLFDAVSSLIRNKIHRLPVI 156
>GUTQ_ECOLI (P17115) Protein gutQ| Length = 321 Score = 29.6 bits (65), Expect = 7.4 Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 3/66 (4%) Frame = +3 Query: 429 VVDSARRCVGVVVKSDRARASHGS---RTKIADVMTSPAITLSCDKTVTDAAALMLKKKI 599 V D+ ++ GV D R G T + + MT TL DA +++K+KI Sbjct: 235 VCDAQQQVQGVFTDGDLRRWLVGGGALTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKI 294 Query: 600 HRLPIV 617 P+V Sbjct: 295 TAAPVV 300
>AAKG1_RAT (P80385) 5'-AMP-activated protein kinase, gamma-1 subunit (AMPK| gamma-1 chain) (AMPKg) Length = 330 Score = 29.6 bits (65), Expect = 7.4 Identities = 10/29 (34%), Positives = 21/29 (72%) Frame = +3 Query: 531 PAITLSCDKTVTDAAALMLKKKIHRLPIV 617 P + +S + ++ DA + +++ KIHRLP++ Sbjct: 127 PLVCISPNASLFDAVSSLIRNKIHRLPVI 155
>AAKG1_PIG (Q09138) 5'-AMP-activated protein kinase, gamma-1 subunit (AMPK| gamma-1 chain) (AMPKg) (38 kDa subunit) Length = 330 Score = 29.6 bits (65), Expect = 7.4 Identities = 10/29 (34%), Positives = 21/29 (72%) Frame = +3 Query: 531 PAITLSCDKTVTDAAALMLKKKIHRLPIV 617 P + +S + ++ DA + +++ KIHRLP++ Sbjct: 128 PLVCISPNASLFDAVSSLIRNKIHRLPVI 156
>AAKG1_MOUSE (O54950) 5'-AMP-activated protein kinase, gamma-1 subunit (AMPK| gamma-1 chain) (AMPKg) Length = 330 Score = 29.6 bits (65), Expect = 7.4 Identities = 10/29 (34%), Positives = 21/29 (72%) Frame = +3 Query: 531 PAITLSCDKTVTDAAALMLKKKIHRLPIV 617 P + +S + ++ DA + +++ KIHRLP++ Sbjct: 127 PLVCISPNASLFDAVSSLIRNKIHRLPVI 155
>AAKG1_BOVIN (P58108) 5'-AMP-activated protein kinase, gamma-1 subunit (AMPK| gamma-1 chain) (AMPKg) Length = 330 Score = 29.6 bits (65), Expect = 7.4 Identities = 10/29 (34%), Positives = 21/29 (72%) Frame = +3 Query: 531 PAITLSCDKTVTDAAALMLKKKIHRLPIV 617 P + +S + ++ DA + +++ KIHRLP++ Sbjct: 128 PLVCISPNASLFDAVSSLIRNKIHRLPVI 156
>PORB_METTH (O27771) Pyruvate synthase subunit porB (EC 1.2.7.1) (Pyruvate| oxidoreductase beta chain) (POR) (Pyruvic-ferredoxin oxidoreductase beta subunit) Length = 288 Score = 29.3 bits (64), Expect = 9.7 Identities = 13/50 (26%), Positives = 28/50 (56%) Frame = -3 Query: 490 EALARSLLTTTPTHRRALSTTGRPDTSWKCPSTSTSAWSAVAISTGVDMA 341 + L ++ + + T + TT P+T+W+ P + +A A+++GV+ A Sbjct: 30 KVLGKNTVAVSSTGCLEVITTPYPETAWRIPWIHVAFENAAAVASGVERA 79 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 60,311,639 Number of Sequences: 219361 Number of extensions: 950971 Number of successful extensions: 3046 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 2883 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3035 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5596027262 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
