ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd23d23 |
|---|---|
| Clone Library Name | barley_pub |
>IF5_MAIZE (P55876) Eukaryotic translation initiation factor 5 (eIF-5)| Length = 451 Score = 207 bits (528), Expect = 2e-53 Identities = 112/194 (57%), Positives = 124/194 (63%) Frame = +2 Query: 26 LKKYVQCYGCGNPETEVLISKKEMITLKCAACGFLSDVDMRDKLTTFILKNPPEAKKGGK 205 +KKYVQCYGCGNPETE+LISK +MI+LKCAACGF+SDVDMRDKLTTFILKNPPE KKGGK Sbjct: 95 IKKYVQCYGCGNPETEILISKTQMISLKCAACGFVSDVDMRDKLTTFILKNPPEQKKGGK 154 Query: 206 DKKAMRRAEKERLKEGEAADEEMXXXXXXXXXXXXXXESXXXXXXXXXXXXXXSDEEHVS 385 DKKAMRRAEKERLKEGEAADEE +S SDE+H S Sbjct: 155 DKKAMRRAEKERLKEGEAADEEQ-KKLKKDAKKKGSKDSTAKGLKKKATTATGSDEDHSS 213 Query: 386 SPRXXXXXXXXXXXXXXXXXVQWATDTSAEAARKRMEEQLSAATAEMVMLAXXXXXXXXX 565 SP VQW TDTS EAA++RM+EQLSAATAEMVML+ Sbjct: 214 SP-TRSHDGDKAAADDDDDDVQWQTDTSIEAAKQRMQEQLSAATAEMVMLSTEETEKKMK 272 Query: 566 XXXXXXDGANGTAK 607 NG+AK Sbjct: 273 QPTHKDGSTNGSAK 286
>IF5Y_ARATH (Q9C8F1) Probable eukaryotic translation initiation factor 5-1| (eIF-5 1) Length = 439 Score = 189 bits (481), Expect = 4e-48 Identities = 100/171 (58%), Positives = 112/171 (65%) Frame = +2 Query: 26 LKKYVQCYGCGNPETEVLISKKEMITLKCAACGFLSDVDMRDKLTTFILKNPPEAKKGGK 205 +KKYVQCYGCGNPETE+LI+K +M+ LKCAACGFLSDVDMRDKLT+FILKNPPE KK K Sbjct: 95 IKKYVQCYGCGNPETEILITKTQMLQLKCAACGFLSDVDMRDKLTSFILKNPPEQKKSSK 154 Query: 206 DKKAMRRAEKERLKEGEAADEEMXXXXXXXXXXXXXXESXXXXXXXXXXXXXXSDEEHVS 385 DKK+MRRAEKERL+EGEAADEEM S S ++ S Sbjct: 155 DKKSMRRAEKERLREGEAADEEMRKLKKEAA-------SKKKAATTGTSKDKVSKKKDHS 207 Query: 386 SPRXXXXXXXXXXXXXXXXXVQWATDTSAEAARKRMEEQLSAATAEMVMLA 538 PR VQW TDTS EAA KRM+EQLSA TAEMVML+ Sbjct: 208 PPRSLSDENDQADSEEDDDDVQWQTDTSREAAEKRMKEQLSAVTAEMVMLS 258
>IF5_PHAVU (P48724) Eukaryotic translation initiation factor 5 (eIF-5)| Length = 443 Score = 184 bits (468), Expect = 1e-46 Identities = 96/173 (55%), Positives = 111/173 (64%), Gaps = 3/173 (1%) Frame = +2 Query: 26 LKKYVQCYGCGNPETEVLISKKEMITLKCAACGFLSDVDMRDKLTTFILKNPPEAKKGGK 205 +KKYVQCYGCGNPETE+LI+K +MI LKCAACGF+SDVDMRDKLTTFI+KNPPE KKG K Sbjct: 95 IKKYVQCYGCGNPETEILITKNQMIQLKCAACGFVSDVDMRDKLTTFIVKNPPEVKKGSK 154 Query: 206 DKKAMRRAEKERLKEGEAADEEMXXXXXXXXXXXXXXESXXXXXXXXXXXXXXSDEEHVS 385 DKKAMRRAEKERLKEGEAADEE+ +E Sbjct: 155 DKKAMRRAEKERLKEGEAADEELKKVKKEVKKKGSSSAKDGTAKSTISKKKGSGSDEDRR 214 Query: 386 SP---RXXXXXXXXXXXXXXXXXVQWATDTSAEAARKRMEEQLSAATAEMVML 535 SP + VQW TDTS +A+R+R++EQLSA TA+MVML Sbjct: 215 SPTHKQIEEKEEAKDEDDDDDDGVQWLTDTSLDASRQRIKEQLSAVTADMVML 267
>IF5Z_ARATH (Q9S825) Probable eukaryotic translation initiation factor 5-2| (eIF-5 2) Length = 437 Score = 177 bits (450), Expect = 2e-44 Identities = 95/171 (55%), Positives = 110/171 (64%) Frame = +2 Query: 26 LKKYVQCYGCGNPETEVLISKKEMITLKCAACGFLSDVDMRDKLTTFILKNPPEAKKGGK 205 +KK+VQCYGCGNPETE++I+K +M+ LKCAACGF+S+VDMRDKLT FILKNPPE KK K Sbjct: 95 IKKFVQCYGCGNPETEIIITKTQMVNLKCAACGFISEVDMRDKLTNFILKNPPEQKKVSK 154 Query: 206 DKKAMRRAEKERLKEGEAADEEMXXXXXXXXXXXXXXESXXXXXXXXXXXXXXSDEEHVS 385 DKKAMR+AEKERLKEGE ADEE +S SDE+ Sbjct: 155 DKKAMRKAEKERLKEGELADEEQRKLKAKKKALSNGKDS-------KTSKNHSSDED--I 205 Query: 386 SPRXXXXXXXXXXXXXXXXXVQWATDTSAEAARKRMEEQLSAATAEMVMLA 538 SP+ V+W TDTS EAA KRM EQLSA TAEMVML+ Sbjct: 206 SPKHDENALEVDEDEDDDDGVEWQTDTSREAAEKRMMEQLSAKTAEMVMLS 256
>IF5_YEAST (P38431) Eukaryotic translation initiation factor 5 (eIF-5)| Length = 405 Score = 69.7 bits (169), Expect = 7e-12 Identities = 30/63 (47%), Positives = 43/63 (68%) Frame = +2 Query: 26 LKKYVQCYGCGNPETEVLISKKEMITLKCAACGFLSDVDMRDKLTTFILKNPPEAKKGGK 205 + K+V C C NPETE++I+K + C ACG + +D+R KL++FILKNPP++ G K Sbjct: 93 INKFVLCGSCKNPETEIIITKDNDLVRDCKACGKRTPMDLRHKLSSFILKNPPDSVSGSK 152 Query: 206 DKK 214 KK Sbjct: 153 KKK 155
>IF5_SCHPO (Q09689) Probable eukaryotic translation initiation factor 5| (eIF-5) Length = 395 Score = 67.4 bits (163), Expect = 3e-11 Identities = 48/159 (30%), Positives = 69/159 (43%), Gaps = 1/159 (0%) Frame = +2 Query: 26 LKKYVQCYGCGNPETEVLISKKEM-ITLKCAACGFLSDVDMRDKLTTFILKNPPEAKKGG 202 ++++V C C NPETE+ I+KK+ I+ C ACG+ +D R KLT I+KNPP KK Sbjct: 94 IRRFVLCASCQNPETELSINKKDQTISYDCKACGYRGVIDGRHKLTGVIVKNPPAKKKSH 153 Query: 203 KDKKAMRRAEKERLKEGEAADEEMXXXXXXXXXXXXXXESXXXXXXXXXXXXXXSDEEHV 382 K K+ AE+E + A++E+ E +DE+ Sbjct: 154 KHKRDSPVAEEE-----DGAEDELTRRIRQEAAELPTAE-------------VVNDED-- 193 Query: 383 SSPRXXXXXXXXXXXXXXXXXVQWATDTSAEAARKRMEE 499 WA DTS EA R R++E Sbjct: 194 -----------------------WAVDTSEEAVRARVQE 209
>IF5_HUMAN (P55010) Eukaryotic translation initiation factor 5 (eIF-5)| Length = 431 Score = 64.3 bits (155), Expect = 3e-10 Identities = 37/83 (44%), Positives = 49/83 (59%), Gaps = 1/83 (1%) Frame = +2 Query: 26 LKKYVQCYGCGNPETEVLIS-KKEMITLKCAACGFLSDVDMRDKLTTFILKNPPEAKKGG 202 +KK+V C C NPET++ ++ KK+ I C ACG+ +D KL TFILKNPPE G Sbjct: 93 IKKFVLCPECENPETDLHVNPKKQTIGNSCKACGYRGMLDTHHKLCTFILKNPPENSDSG 152 Query: 203 KDKKAMRRAEKERLKEGEAADEE 271 KK EKE+ K + D+E Sbjct: 153 TGKK-----EKEK-KNRKGKDKE 169
>IF5_CAEEL (Q22918) Eukaryotic translation initiation factor 5 (eIF-5)| Length = 436 Score = 63.2 bits (152), Expect = 6e-10 Identities = 33/80 (41%), Positives = 48/80 (60%) Frame = +2 Query: 26 LKKYVQCYGCGNPETEVLISKKEMITLKCAACGFLSDVDMRDKLTTFILKNPPEAKKGGK 205 +KK+V C C NPET++ + +K I KC ACG D+D++ KL+TFI+KNPP K Sbjct: 93 IKKFVLCKSCENPETQLFV-RKNNIKSKCKACGCSFDIDLKHKLSTFIMKNPP------K 145 Query: 206 DKKAMRRAEKERLKEGEAAD 265 +AE++ K+ AD Sbjct: 146 IDVDFSKAEQKNGKKTSGAD 165
>IF5_RAT (Q07205) Eukaryotic translation initiation factor 5 (eIF-5)| Length = 429 Score = 62.8 bits (151), Expect = 8e-10 Identities = 37/83 (44%), Positives = 49/83 (59%), Gaps = 1/83 (1%) Frame = +2 Query: 26 LKKYVQCYGCGNPETEVLIS-KKEMITLKCAACGFLSDVDMRDKLTTFILKNPPEAKKGG 202 +KK+V C C NPET++ ++ KK+ I C ACG+ +D KL TFILKNPPE G Sbjct: 93 IKKFVLCPECENPETDLHVNPKKQTIGNSCKACGYRGMLDTHHKLCTFILKNPPENSDIG 152 Query: 203 KDKKAMRRAEKERLKEGEAADEE 271 KK EKE+ K + D+E Sbjct: 153 TGKK-----EKEK-KNRKGKDKE 169
>IF5_MOUSE (P59325) Eukaryotic translation initiation factor 5 (eIF-5)| Length = 429 Score = 62.8 bits (151), Expect = 8e-10 Identities = 37/83 (44%), Positives = 49/83 (59%), Gaps = 1/83 (1%) Frame = +2 Query: 26 LKKYVQCYGCGNPETEVLIS-KKEMITLKCAACGFLSDVDMRDKLTTFILKNPPEAKKGG 202 +KK+V C C NPET++ ++ KK+ I C ACG+ +D KL TFILKNPPE G Sbjct: 93 IKKFVLCPECENPETDLHVNPKKQTIGNSCKACGYRGMLDTHHKLCTFILKNPPENSDIG 152 Query: 203 KDKKAMRRAEKERLKEGEAADEE 271 KK EKE+ K + D+E Sbjct: 153 TGKK-----EKEK-KNRKGKDKE 169
>IF5_TRICA (Q26891) Eukaryotic translation initiation factor 5 (eIF-5)| (Fragment) Length = 162 Score = 60.8 bits (146), Expect = 3e-09 Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 3/80 (3%) Frame = +2 Query: 26 LKKYVQCYGCGNPETEVLIS-KKEMITLKCAACGFLSDVDMRDKLTTFILKNPPEAKKG- 199 ++K+V C C NPETE+L+S K+ I+ C ACG+ S ++ KL TFILKNPP Sbjct: 7 IRKFVLCPECENPETELLVSTKRSTISQGCKACGYHSPLESNHKLVTFILKNPPNLNPAV 66 Query: 200 -GKDKKAMRRAEKERLKEGE 256 G +R+++ + G+ Sbjct: 67 QGSSLTEGKRSKRSKRPNGD 86
>IF5_DROME (Q9VXK6) Eukaryotic translation initiation factor 5 (eIF-5)| Length = 464 Score = 55.8 bits (133), Expect = 1e-07 Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 3/81 (3%) Frame = +2 Query: 26 LKKYVQCYGCGNPETEVLIS-KKEMITLKCAACGFLSDVDMRDKLTTFILKNPPEAKKG- 199 ++K+V C C NPET + +S K + I+ C ACGF + + K+ TFI+KNPP Sbjct: 94 IRKFVLCPECDNPETNLTVSAKNQTISQSCKACGFHGLLKVNHKVNTFIVKNPPSLNPAA 153 Query: 200 -GKDKKAMRRAEKERLKEGEA 259 G +R+ K++ K A Sbjct: 154 QGSSLTEGKRSRKQKQKNDNA 174
>IF2B_METJA (Q57562) Translation initiation factor 2 beta subunit (eIF-2-beta)| (aIF2-beta) Length = 143 Score = 36.6 bits (83), Expect = 0.064 Identities = 16/42 (38%), Positives = 26/42 (61%) Frame = +2 Query: 20 ELLKKYVQCYGCGNPETEVLISKKEMITLKCAACGFLSDVDM 145 + L++YV C CG P+T++ I + + LKC ACG + + M Sbjct: 102 DFLREYVICRECGKPDTKI-IKEGRVHLLKCMACGAIRPIRM 142
>IF2B_METAC (Q8TU91) Translation initiation factor 2 beta subunit (eIF-2-beta)| (aIF2-beta) Length = 202 Score = 36.2 bits (82), Expect = 0.083 Identities = 18/52 (34%), Positives = 31/52 (59%) Frame = +2 Query: 32 KYVQCYGCGNPETEVLISKKEMITLKCAACGFLSDVDMRDKLTTFILKNPPE 187 +YV C CG P+T+ L+ ++ LKC+ACG V R K++ ++++ E Sbjct: 98 EYVMCSECGRPDTQ-LVRVDRVLVLKCSACGAHRPVKKR-KVSNVVVRDAIE 147
>IF2B_METMA (Q8PWV1) Translation initiation factor 2 beta subunit (eIF-2-beta)| (aIF2-beta) Length = 202 Score = 35.8 bits (81), Expect = 0.11 Identities = 18/52 (34%), Positives = 30/52 (57%) Frame = +2 Query: 32 KYVQCYGCGNPETEVLISKKEMITLKCAACGFLSDVDMRDKLTTFILKNPPE 187 +YV C CG P+T+ L+ ++ LKC+ACG V R K++ +++ E Sbjct: 98 EYVMCSECGRPDTQ-LVRVDRVLVLKCSACGAHRPVKKR-KVSNVVVREAIE 147
>IF2B_PYRHO (O58312) Translation initiation factor 2 beta subunit (eIF-2-beta)| (aIF2-beta) Length = 140 Score = 35.8 bits (81), Expect = 0.11 Identities = 15/36 (41%), Positives = 24/36 (66%) Frame = +2 Query: 17 RELLKKYVQCYGCGNPETEVLISKKEMITLKCAACG 124 ++ +K+YV C CG+P+T++ I + LKC ACG Sbjct: 98 KKYIKEYVICPVCGSPDTKI-IKRDRFYFLKCEACG 132
>IF2B_PYRAB (Q9UYR6) Translation initiation factor 2 beta subunit (eIF-2-beta)| (aIF2-beta) Length = 140 Score = 35.8 bits (81), Expect = 0.11 Identities = 15/36 (41%), Positives = 24/36 (66%) Frame = +2 Query: 17 RELLKKYVQCYGCGNPETEVLISKKEMITLKCAACG 124 ++ +K+YV C CG+P+T++ I + LKC ACG Sbjct: 98 KKYIKEYVICPVCGSPDTKI-IKRDRFYFLKCEACG 132
>IF2B_PYRFU (Q8U3I5) Translation initiation factor 2 beta subunit (eIF-2-beta)| (aIF2-beta) Length = 140 Score = 35.0 bits (79), Expect = 0.19 Identities = 15/36 (41%), Positives = 24/36 (66%) Frame = +2 Query: 17 RELLKKYVQCYGCGNPETEVLISKKEMITLKCAACG 124 ++ +K+YV C CG+P+T++ I + LKC ACG Sbjct: 98 KKYIKEYVICPVCGSPDTKI-IKRDRFHFLKCEACG 132
>IF2B_PYRKO (Q5JIT0) Translation initiation factor 2 beta subunit (eIF-2-beta)| (aIF2-beta) Length = 142 Score = 35.0 bits (79), Expect = 0.19 Identities = 16/36 (44%), Positives = 24/36 (66%) Frame = +2 Query: 17 RELLKKYVQCYGCGNPETEVLISKKEMITLKCAACG 124 ++ LK++V C CG+P+T++ I K LKC ACG Sbjct: 100 KKYLKEFVICPVCGSPDTKI-IKKGRFHFLKCEACG 134
>IF2B_CAEEL (Q21230) Putative eukaryotic translation initiation factor 2 beta| subunit (eIF-2-beta) Length = 250 Score = 34.3 bits (77), Expect = 0.32 Identities = 22/73 (30%), Positives = 38/73 (52%) Frame = +2 Query: 17 RELLKKYVQCYGCGNPETEVLISKKEMITLKCAACGFLSDVDMRDKLTTFILKNPPEAKK 196 R+ +K+YV C+ C +PET+ L + L+C CG + + +K+ +A Sbjct: 184 RKYIKEYVMCHTCKSPETQ-LTKDTRLFFLQCTNCG--------SRCSVTAIKSGFKAVV 234 Query: 197 GGKDKKAMRRAEK 235 G + A+RRAE+ Sbjct: 235 G--KRAAIRRAEE 245
>IF2B_WHEAT (O24473) Eukaryotic translation initiation factor 2 beta subunit| (eIF-2-beta) (P38) Length = 270 Score = 33.9 bits (76), Expect = 0.41 Identities = 13/36 (36%), Positives = 22/36 (61%) Frame = +2 Query: 17 RELLKKYVQCYGCGNPETEVLISKKEMITLKCAACG 124 R + +YV C+GC +P+T +L + + L+C CG Sbjct: 213 RRYINEYVICHGCKSPDT-ILSKENRLFFLRCEQCG 247
>IF2B_METKA (Q8TWR5) Translation initiation factor 2 beta subunit (eIF-2-beta)| (aIF2-beta) Length = 138 Score = 33.9 bits (76), Expect = 0.41 Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 4/44 (9%) Frame = +2 Query: 20 ELLKKYVQ----CYGCGNPETEVLISKKEMITLKCAACGFLSDV 139 E LK YV+ C CG P+T+++ ++ I LKC ACG S V Sbjct: 92 EELKNYVEEFVLCPECGKPDTKLVREDRQWI-LKCEACGAWSSV 134
>IF2B_DROME (P41375) Eukaryotic translation initiation factor 2 beta subunit| (eIF-2-beta) Length = 312 Score = 33.5 bits (75), Expect = 0.54 Identities = 14/36 (38%), Positives = 22/36 (61%) Frame = +2 Query: 17 RELLKKYVQCYGCGNPETEVLISKKEMITLKCAACG 124 R +K+YV C+ C +PET +L + L+C +CG Sbjct: 251 RRYIKEYVTCHTCRSPET-ILQKDTRLFFLQCESCG 285
>IF2B_METMP (Q6M0H3) Translation initiation factor 2 beta subunit (eIF-2-beta)| (aIF2-beta) Length = 138 Score = 33.1 bits (74), Expect = 0.70 Identities = 14/38 (36%), Positives = 23/38 (60%) Frame = +2 Query: 26 LKKYVQCYGCGNPETEVLISKKEMITLKCAACGFLSDV 139 + +YV C CG P+T++ + + + LKC ACG + V Sbjct: 99 VNEYVLCPECGKPDTKI-VKEGRIHFLKCTACGAMKPV 135
>IF2B_THEVO (Q97B05) Translation initiation factor 2 beta subunit (eIF-2-beta)| (aIF2-beta) Length = 208 Score = 33.1 bits (74), Expect = 0.70 Identities = 15/35 (42%), Positives = 22/35 (62%) Frame = +2 Query: 20 ELLKKYVQCYGCGNPETEVLISKKEMITLKCAACG 124 E + YV+CY CG+ +TE+ S + + L C ACG Sbjct: 95 EYINTYVRCYECGSLDTEIQKSGRVSL-LVCKACG 128
>IF2B_ARCFU (O27958) Translation initiation factor 2 beta subunit (eIF-2-beta)| (aIF2-beta) Length = 137 Score = 33.1 bits (74), Expect = 0.70 Identities = 13/35 (37%), Positives = 23/35 (65%) Frame = +2 Query: 20 ELLKKYVQCYGCGNPETEVLISKKEMITLKCAACG 124 + ++ YV C C +P+TE I ++ ++ L+C ACG Sbjct: 96 DYVRLYVLCRECNSPDTE-FIKEERVLMLRCLACG 129
>IF2B_THEAC (Q9HKJ3) Translation initiation factor 2 beta subunit (eIF-2-beta)| (aIF2-beta) Length = 209 Score = 32.7 bits (73), Expect = 0.92 Identities = 15/35 (42%), Positives = 22/35 (62%) Frame = +2 Query: 20 ELLKKYVQCYGCGNPETEVLISKKEMITLKCAACG 124 E + YV+CY CG+ +TE+ S + + L C ACG Sbjct: 95 EYINTYVRCYECGSLDTEIQKSGR-ISLLVCKACG 128
>IF2B_MALDO (P55871) Eukaryotic translation initiation factor 2 beta subunit| (eIF-2-beta) Length = 271 Score = 32.3 bits (72), Expect = 1.2 Identities = 13/36 (36%), Positives = 21/36 (58%) Frame = +2 Query: 17 RELLKKYVQCYGCGNPETEVLISKKEMITLKCAACG 124 R + +YV C GC +P+T +L + + L+C CG Sbjct: 214 RRYVNEYVICLGCQSPDT-ILSKENRLFFLRCEKCG 248
>IF2B_NANEQ (Q74M98) Translation initiation factor 2 beta subunit (eIF-2-beta)| (aIF2-beta) Length = 139 Score = 32.0 bits (71), Expect = 1.6 Identities = 14/41 (34%), Positives = 24/41 (58%) Frame = +2 Query: 20 ELLKKYVQCYGCGNPETEVLISKKEMITLKCAACGFLSDVD 142 E + +V C C P+TE++ +++ +KC ACG S V+ Sbjct: 96 EFINIFVICPVCKRPDTELIERGRKIYYIKCHACGSESPVN 136
>IF2B_AERPE (Q9YBR6) Translation initiation factor 2 beta subunit (eIF-2-beta)| (aIF2-beta) Length = 135 Score = 32.0 bits (71), Expect = 1.6 Identities = 14/33 (42%), Positives = 22/33 (66%) Frame = +2 Query: 26 LKKYVQCYGCGNPETEVLISKKEMITLKCAACG 124 +K YV+C CG+ +T+ L+ ++ LKC ACG Sbjct: 96 MKTYVRCPTCGSIDTK-LLRQERAYMLKCEACG 127
>IF2B_ARATH (Q41969) Eukaryotic translation initiation factor 2 beta subunit| (eIF-2-beta) Length = 268 Score = 31.6 bits (70), Expect = 2.0 Identities = 13/36 (36%), Positives = 20/36 (55%) Frame = +2 Query: 17 RELLKKYVQCYGCGNPETEVLISKKEMITLKCAACG 124 R + YV C GC +P+T +L + + L+C CG Sbjct: 213 RRYITDYVICLGCKSPDT-ILSKENRLFFLRCEKCG 247
>IF2B_METTH (O27797) Translation initiation factor 2 beta subunit (eIF-2-beta)| (aIF2-beta) Length = 135 Score = 31.6 bits (70), Expect = 2.0 Identities = 13/35 (37%), Positives = 21/35 (60%) Frame = +2 Query: 20 ELLKKYVQCYGCGNPETEVLISKKEMITLKCAACG 124 + + K+V C+ C P+T + I + + LKC ACG Sbjct: 94 DYVNKFVICHECNRPDTRI-IREGRISLLKCEACG 127
>IF2B_SULTO (Q974Z6) Translation initiation factor 2 beta subunit (eIF-2-beta)| (aIF2-beta) Length = 139 Score = 31.2 bits (69), Expect = 2.7 Identities = 15/33 (45%), Positives = 21/33 (63%) Frame = +2 Query: 26 LKKYVQCYGCGNPETEVLISKKEMITLKCAACG 124 +K YVQC C + +T VLI +K+ + C ACG Sbjct: 100 IKTYVQCSTCKSLDT-VLIKEKKAWYISCLACG 131
>IF2B_PICTO (Q6L0E6) Translation initiation factor 2 beta subunit (eIF-2-beta)| (aIF2-beta) Length = 205 Score = 30.0 bits (66), Expect = 6.0 Identities = 14/35 (40%), Positives = 20/35 (57%) Frame = +2 Query: 20 ELLKKYVQCYGCGNPETEVLISKKEMITLKCAACG 124 E + YV CY C +P+TE+ + + L C ACG Sbjct: 95 EYMATYVICYECKSPDTEIQKIGRTYL-LVCKACG 128
>MGST1_RAT (P08011) Microsomal glutathione S-transferase 1 (EC 2.5.1.18)| (Microsomal GST-1) (Microsomal GST-I) Length = 154 Score = 30.0 bits (66), Expect = 6.0 Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 4/73 (5%) Frame = +2 Query: 65 ETEVLISKKEMITLKCAACGFLSDVDMRDKLTTFILKNPPEAK---KGGKDKKAMRRAEK 235 + EVL++ T+ A FLS +LT + NP + KG KK +R EK Sbjct: 8 DNEVLMAFTSYATIILAKMMFLSSATAFQRLTNKVFANPEDCAGFGKGENAKKFLRTDEK 67 Query: 236 -ERLKEGEAADEE 271 ER++ D E Sbjct: 68 VERVRRAHLNDLE 80
>IF2B_SCHPO (P56329) Probable eukaryotic translation initiation factor 2 beta| subunit (eIF-2-beta) Length = 321 Score = 30.0 bits (66), Expect = 6.0 Identities = 13/41 (31%), Positives = 22/41 (53%) Frame = +2 Query: 17 RELLKKYVQCYGCGNPETEVLISKKEMITLKCAACGFLSDV 139 R + +YV C C +P+T +L + + + C ACG + V Sbjct: 264 RRYIVEYVTCKTCKSPDT-ILTKENRIFFMTCEACGSVRSV 303
>RN113_CAEEL (O17917) Putative RING finger protein 113 homolog| Length = 384 Score = 29.6 bits (65), Expect = 7.8 Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 3/79 (3%) Frame = +2 Query: 44 CYGCGNPETEVLISK-KEMITLKCAACGF--LSDVDMRDKLTTFILKNPPEAKKGGKDKK 214 C+ CGNP + +++K K CA F S + + T I+ E K KK Sbjct: 241 CFICGNPFVDPIVTKCKHYFCTGCALKSFQKSSKCPICQQNTENIMNTAKELLTYLKRKK 300 Query: 215 AMRRAEKERLKEGEAADEE 271 ++ E E+ +E + +D++ Sbjct: 301 QQQKQEAEKQEEEKDSDDD 319
>TOP1_CANAL (Q00313) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)| Length = 778 Score = 29.6 bits (65), Expect = 7.8 Identities = 19/55 (34%), Positives = 30/55 (54%) Frame = +2 Query: 107 KCAACGFLSDVDMRDKLTTFILKNPPEAKKGGKDKKAMRRAEKERLKEGEAADEE 271 +C CG ++ +KL K +K ++KKAM R EK+R+KE + +EE Sbjct: 228 ECGGCGV--EIKKFEKLD--FSKMYAHFEKLREEKKAMSREEKKRIKEEKEKEEE 278
>IF2B_HALSA (Q9HQ97) Translation initiation factor 2 beta subunit (eIF-2-beta)| (aIF2-beta) Length = 132 Score = 29.6 bits (65), Expect = 7.8 Identities = 16/38 (42%), Positives = 21/38 (55%) Frame = +2 Query: 26 LKKYVQCYGCGNPETEVLISKKEMITLKCAACGFLSDV 139 ++ YV C CG P+T L + + I L C ACG S V Sbjct: 96 VETYVTCPECGLPDTN-LETDGDTIQLHCEACGARSTV 132 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 73,287,067 Number of Sequences: 219361 Number of extensions: 1264327 Number of successful extensions: 3992 Number of sequences better than 10.0: 39 Number of HSP's better than 10.0 without gapping: 3807 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3971 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5881538857 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
