ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd23d22 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X00408.1|CHHV01 Hordeum vulgare chloroplast genes for ATPase subunits B and E, transfer RNA2-Met and transfer RNA1-Val Length = 3819 Score = 1102 bits (556), Expect = 0.0 Identities = 573/581 (98%) Strand = Plus / Plus Query: 2 caaaggagcttattatgcaatgaacataatcgatcttattgcaaaatcaatgtcttactt 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2355 caaaggagcttattatgcaatgaacataatcgatcttattgcaaaatcaatgtcttactt 2414 Query: 62 catagattcgagagaataggagaacagtagcctgacaaacagtcggttcagtccgattca 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2415 catagattcgagagaataggagaacagtagcctgacaaacagtcggttcagtccgattca 2474 Query: 122 ggtgccaattcaggtgcctaatcaaatagaacccttatggatttgctagttgataaggta 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2475 ggtgccaattcaggtgcctaatcaaatagaacccttatggatttgctagttgataaggta 2534 Query: 182 aatatccagcccactaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2535 aatatccagcccactaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttt 2594 Query: 242 tcgttctatgaactttaaggtgtatgaagtctcatagttaactcttgcagtggaacgata 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2595 tcgttctatgaactttaaggtgtatgaagtctcatagttaactcttgcagtggaacgata 2654 Query: 302 gagactccatttcacttaggttgatttaatttagaccagaggcagacctaagtcaaggta 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2655 gagactccatttcacttaggttgatttaatttagaccagaggcagacctaagtcaaggta 2714 Query: 362 atcctcctttgaaacactttggtattgctcctagatagatcataatacaaaaaatcaatc 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2715 atcctcctttgaaacactttggtattgctcctagatagatcataatacaaaaaatcaatc 2774 Query: 422 agagcacagggagccatctcattatctttccgtaaagaaaaactatggtggactaactga 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2775 agagcacagggagccatctcattatctttccgtaaagaaaaactatggtggactaactga 2834 Query: 482 tctttaaatcagtttatgaaagagcccaatgcnnnnnnntgcatgttgggtctttgaaac 541 |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 2835 tctttaaatcagtttatgaaagagcccaatgcaaaaaaatgcatgttgggtctttgaaac 2894 Query: 542 agttcaaatcatttcgataataatccgtttgatctgtttta 582 |||||||||||||||||||||||||||||||||||||||| Sbjct: 2895 tgttcaaatcatttcgataataatccgtttgatctgtttta 2935
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1086 bits (548), Expect = 0.0 Identities = 571/581 (98%) Strand = Plus / Minus Query: 2 caaaggagcttattatgcaatgaacataatcgatcttattgcaaaatcaatgtcttactt 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51773 caaaggagcttattatgcaatgaacataatcgatcttattgcaaaatcaatgtcttactt 51714 Query: 62 catagattcgagagaataggagaacagtagcctgacaaacagtcggttcagtccgattca 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51713 catagattcgagagaataggagaacagtagcctgacaaacagtcggttcagtccgattca 51654 Query: 122 ggtgccaattcaggtgcctaatcaaatagaacccttatggatttgctagttgataaggta 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51653 ggtgccaattcaggtgcctaatcaaatagaacccttatggatttgctagttgataaggta 51594 Query: 182 aatatccagcccactaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttt 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51593 aatatccagcccactaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttt 51534 Query: 242 tcgttctatgaactttaaggtgtatgaagtctcatagttaactcttgcagtggaacgata 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 51533 tcgttctatgaactttaaggtgtatgaagtctcatagttaactcttgcagtggaacgata 51474 Query: 302 gagactccatttcacttaggttgatttaatttagaccagaggcagacctaagtcaaggta 361 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 51473 gagactccatttcacttaggttgatttaatttagaccggaggcagacctaagtcaaggta 51414 Query: 362 atcctcctttgaaacactttggtattgctcctagatagatcataatacaaaaaatcaatc 421 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 51413 atcctcctttgaaacactttggtattgctcctagatagatcataataaaaaaaatcaatc 51354 Query: 422 agagcacagggagccatctcattatctttccgtaaagaaaaactatggtggactaactga 481 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 51353 agagcacagggagccatctcattatctttccgtaaagaaaaagtatggtggactaactga 51294 Query: 482 tctttaaatcagtttatgaaagagcccaatgcnnnnnnntgcatgttgggtctttgaaac 541 |||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 51293 tctttaaatcagtttatgaaagagcccaatgcaaaaaaatgcatgttgggtctttgaaac 51234 Query: 542 agttcaaatcatttcgataataatccgtttgatctgtttta 582 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 51233 agttcaaatcatttcgataataatccgtttgatctgtttta 51193
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 880 bits (444), Expect = 0.0 Identities = 542/577 (93%) Strand = Plus / Minus Query: 6 ggagcttattatgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcata 65 |||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||| Sbjct: 50973 ggagcttattatgcaatgaacatagtggatcttcttgcaaaatcaatgtcttacttcatg 50914 Query: 66 gattcgagagaataggagaacagtagcctgacaaacagtcggttcagtccgattcaggtg 125 |||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||| Sbjct: 50913 gattcgagagaataggagaacagtcgcctgacaaatagttggttcagtccgattcaggta 50854 Query: 126 ccaattcaggtgcctaatcaaatagaacccttatggatttgctagttgataaggtaaata 185 ||||| ||||||||||| ||||||||||| |||| ||||||||||||||||||||||||| Sbjct: 50853 ccaatccaggtgcctaaacaaatagaacctttattgatttgctagttgataaggtaaata 50794 Query: 186 tccagcccactaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgt 245 |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 50793 tccagcccactaaatgctaggcttaatgaggataagggcctccaaaaaaattcttttcgt 50734 Query: 246 tctatgaactttaaggtgtatgaagtctcatagttaactcttgcagtggaacgatagaga 305 |||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||| Sbjct: 50733 tctatgaactttaaggtgtatgaagtctcatagtcaactcttgtagcggaacgatagaga 50674 Query: 306 ctccatttcacttaggttgatttaatttagaccagaggcagacctaagtcaaggtaatcc 365 ||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 50673 ctctatttcacttaggttgatttaatttaggccggaggcagacctaagtcaaggtaatcc 50614 Query: 366 tcctttgaaacactttggtattgctcctagatagatcataatacaaaaaatcaatcagag 425 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 50613 tcctttgaaacactttggtattgctcttagatagatcataatacaaataatcaatcagag 50554 Query: 426 cacagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatctt 485 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50553 cgcagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatctt 50494 Query: 486 taaatcagtttatgaaagagcccaatgcnnnnnnntgcatgttgggtctttgaaacagtt 545 | ||||||| || |||||||||||||| ||||||||||||||||||||||||| Sbjct: 50493 tctatcagttgataaaagagcccaatgcaaaaaaatgcatgttgggtctttgaaacagtt 50434 Query: 546 caaatcatttcgataataatccgtttgatctgtttta 582 | ||||||||||||||||||||||||||||||||||| Sbjct: 50433 cgaatcatttcgataataatccgtttgatctgtttta 50397
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 880 bits (444), Expect = 0.0 Identities = 542/577 (93%) Strand = Plus / Minus Query: 6 ggagcttattatgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcata 65 |||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||| Sbjct: 50973 ggagcttattatgcaatgaacatagtggatcttcttgcaaaatcaatgtcttacttcatg 50914 Query: 66 gattcgagagaataggagaacagtagcctgacaaacagtcggttcagtccgattcaggtg 125 |||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||| Sbjct: 50913 gattcgagagaataggagaacagtcgcctgacaaatagttggttcagtccgattcaggta 50854 Query: 126 ccaattcaggtgcctaatcaaatagaacccttatggatttgctagttgataaggtaaata 185 ||||| ||||||||||| ||||||||||| |||| ||||||||||||||||||||||||| Sbjct: 50853 ccaatccaggtgcctaaacaaatagaacctttattgatttgctagttgataaggtaaata 50794 Query: 186 tccagcccactaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgt 245 |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 50793 tccagcccactaaatgctaggcttaatgaggataagggcctccaaaaaaattcttttcgt 50734 Query: 246 tctatgaactttaaggtgtatgaagtctcatagttaactcttgcagtggaacgatagaga 305 |||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||| Sbjct: 50733 tctatgaactttaaggtgtatgaagtctcatagtcaactcttgtagcggaacgatagaga 50674 Query: 306 ctccatttcacttaggttgatttaatttagaccagaggcagacctaagtcaaggtaatcc 365 ||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 50673 ctctatttcacttaggttgatttaatttaggccggaggcagacctaagtcaaggtaatcc 50614 Query: 366 tcctttgaaacactttggtattgctcctagatagatcataatacaaaaaatcaatcagag 425 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 50613 tcctttgaaacactttggtattgctcttagatagatcataatacaaataatcaatcagag 50554 Query: 426 cacagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatctt 485 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50553 cgcagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatctt 50494 Query: 486 taaatcagtttatgaaagagcccaatgcnnnnnnntgcatgttgggtctttgaaacagtt 545 | ||||||| || |||||||||||||| ||||||||||||||||||||||||| Sbjct: 50493 tctatcagttgataaaagagcccaatgcaaaaaaatgcatgttgggtctttgaaacagtt 50434 Query: 546 caaatcatttcgataataatccgtttgatctgtttta 582 | ||||||||||||||||||||||||||||||||||| Sbjct: 50433 cgaatcatttcgataataatccgtttgatctgtttta 50397
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 880 bits (444), Expect = 0.0 Identities = 542/577 (93%) Strand = Plus / Minus Query: 6 ggagcttattatgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcata 65 |||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||| Sbjct: 50921 ggagcttattatgcaatgaacatagtggatcttcttgcaaaatcaatgtcttacttcatg 50862 Query: 66 gattcgagagaataggagaacagtagcctgacaaacagtcggttcagtccgattcaggtg 125 |||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||| Sbjct: 50861 gattcgagagaataggagaacagtcgcctgacaaatagttggttcagtccgattcaggta 50802 Query: 126 ccaattcaggtgcctaatcaaatagaacccttatggatttgctagttgataaggtaaata 185 ||||| ||||||||||| ||||||||||| |||| ||||||||||||||||||||||||| Sbjct: 50801 ccaatccaggtgcctaaacaaatagaacctttattgatttgctagttgataaggtaaata 50742 Query: 186 tccagcccactaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgt 245 |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 50741 tccagcccactaaatgctaggcttaatgaggataagggcctccaaaaaaattcttttcgt 50682 Query: 246 tctatgaactttaaggtgtatgaagtctcatagttaactcttgcagtggaacgatagaga 305 |||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||| Sbjct: 50681 tctatgaactttaaggtgtatgaagtctcatagtcaactcttgtagcggaacgatagaga 50622 Query: 306 ctccatttcacttaggttgatttaatttagaccagaggcagacctaagtcaaggtaatcc 365 ||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 50621 ctctatttcacttaggttgatttaatttaggccggaggcagacctaagtcaaggtaatcc 50562 Query: 366 tcctttgaaacactttggtattgctcctagatagatcataatacaaaaaatcaatcagag 425 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 50561 tcctttgaaacactttggtattgctcttagatagatcataatacaaataatcaatcagag 50502 Query: 426 cacagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatctt 485 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50501 cgcagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatctt 50442 Query: 486 taaatcagtttatgaaagagcccaatgcnnnnnnntgcatgttgggtctttgaaacagtt 545 | ||||||| || |||||||||||||| ||||||||||||||||||||||||| Sbjct: 50441 tctatcagttgataaaagagcccaatgcaaaaaaatgcatgttgggtctttgaaacagtt 50382 Query: 546 caaatcatttcgataataatccgtttgatctgtttta 582 | ||||||||||||||||||||||||||||||||||| Sbjct: 50381 cgaatcatttcgataataatccgtttgatctgtttta 50345
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 880 bits (444), Expect = 0.0 Identities = 542/577 (93%) Strand = Plus / Minus Query: 6 ggagcttattatgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcata 65 |||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||| Sbjct: 31515349 ggagcttattatgcaatgaacatagtggatcttcttgcaaaatcaatgtcttacttcatg 31515290 Query: 66 gattcgagagaataggagaacagtagcctgacaaacagtcggttcagtccgattcaggtg 125 |||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||| Sbjct: 31515289 gattcgagagaataggagaacagtcgcctgacaaatagttggttcagtccgattcaggta 31515230 Query: 126 ccaattcaggtgcctaatcaaatagaacccttatggatttgctagttgataaggtaaata 185 ||||| ||||||||||| ||||||||||| |||| ||||||||||||||||||||||||| Sbjct: 31515229 ccaatccaggtgcctaaacaaatagaacctttattgatttgctagttgataaggtaaata 31515170 Query: 186 tccagcccactaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgt 245 |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 31515169 tccagcccactaaatgctaggcttaatgaggataagggcctccaaaaaaattcttttcgt 31515110 Query: 246 tctatgaactttaaggtgtatgaagtctcatagttaactcttgcagtggaacgatagaga 305 |||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||| Sbjct: 31515109 tctatgaactttaaggtgtatgaagtctcatagtcaactcttgtagcggaacgatagaga 31515050 Query: 306 ctccatttcacttaggttgatttaatttagaccagaggcagacctaagtcaaggtaatcc 365 ||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 31515049 ctctatttcacttaggttgatttaatttaggccggaggcagacctaagtcaaggtaatcc 31514990 Query: 366 tcctttgaaacactttggtattgctcctagatagatcataatacaaaaaatcaatcagag 425 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 31514989 tcctttgaaacactttggtattgctcttagatagatcataatacaaataatcaatcagag 31514930 Query: 426 cacagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatctt 485 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31514929 cgcagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatctt 31514870 Query: 486 taaatcagtttatgaaagagcccaatgcnnnnnnntgcatgttgggtctttgaaacagtt 545 | ||||||| || |||||||||||||| ||||||||||||||||||||||||| Sbjct: 31514869 tctatcagttgataaaagagcccaatgcaaaaaaatgcatgttgggtctttgaaacagtt 31514810 Query: 546 caaatcatttcgataataatccgtttgatctgtttta 582 | ||||||||||||||||||||||||||||||||||| Sbjct: 31514809 cgaatcatttcgataataatccgtttgatctgtttta 31514773
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 880 bits (444), Expect = 0.0 Identities = 542/577 (93%) Strand = Plus / Plus Query: 6 ggagcttattatgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcata 65 |||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||| Sbjct: 77247 ggagcttattatgcaatgaacatagtggatcttcttgcaaaatcaatgtcttacttcatg 77306 Query: 66 gattcgagagaataggagaacagtagcctgacaaacagtcggttcagtccgattcaggtg 125 |||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||| Sbjct: 77307 gattcgagagaataggagaacagtcgcctgacaaatagttggttcagtccgattcaggta 77366 Query: 126 ccaattcaggtgcctaatcaaatagaacccttatggatttgctagttgataaggtaaata 185 ||||| ||||||||||| ||||||||||| |||| ||||||||||||||||||||||||| Sbjct: 77367 ccaatccaggtgcctaaacaaatagaacctttattgatttgctagttgataaggtaaata 77426 Query: 186 tccagcccactaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgt 245 |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 77427 tccagcccactaaatgctaggcttaatgaggataagggcctccaaaaaaattcttttcgt 77486 Query: 246 tctatgaactttaaggtgtatgaagtctcatagttaactcttgcagtggaacgatagaga 305 |||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||| Sbjct: 77487 tctatgaactttaaggtgtatgaagtctcatagtcaactcttgtagcggaacgatagaga 77546 Query: 306 ctccatttcacttaggttgatttaatttagaccagaggcagacctaagtcaaggtaatcc 365 ||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 77547 ctctatttcacttaggttgatttaatttaggccggaggcagacctaagtcaaggtaatcc 77606 Query: 366 tcctttgaaacactttggtattgctcctagatagatcataatacaaaaaatcaatcagag 425 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 77607 tcctttgaaacactttggtattgctcttagatagatcataatacaaataatcaatcagag 77666 Query: 426 cacagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatctt 485 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 77667 cgcagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatctt 77726 Query: 486 taaatcagtttatgaaagagcccaatgcnnnnnnntgcatgttgggtctttgaaacagtt 545 | ||||||| || |||||||||||||| ||||||||||||||||||||||||| Sbjct: 77727 tctatcagttgataaaagagcccaatgcaaaaaaatgcatgttgggtctttgaaacagtt 77786 Query: 546 caaatcatttcgataataatccgtttgatctgtttta 582 | ||||||||||||||||||||||||||||||||||| Sbjct: 77787 cgaatcatttcgataataatccgtttgatctgtttta 77823
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 880 bits (444), Expect = 0.0 Identities = 542/577 (93%) Strand = Plus / Minus Query: 6 ggagcttattatgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcata 65 |||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||| Sbjct: 11287135 ggagcttattatgcaatgaacatagtggatcttcttgcaaaatcaatgtcttacttcatg 11287076 Query: 66 gattcgagagaataggagaacagtagcctgacaaacagtcggttcagtccgattcaggtg 125 |||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||| Sbjct: 11287075 gattcgagagaataggagaacagtcgcctgacaaatagttggttcagtccgattcaggta 11287016 Query: 126 ccaattcaggtgcctaatcaaatagaacccttatggatttgctagttgataaggtaaata 185 ||||| ||||||||||| ||||||||||| |||| ||||||||||||||||||||||||| Sbjct: 11287015 ccaatccaggtgcctaaacaaatagaacctttattgatttgctagttgataaggtaaata 11286956 Query: 186 tccagcccactaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgt 245 |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 11286955 tccagcccactaaatgctaggcttaatgaggataagggcctccaaaaaaattcttttcgt 11286896 Query: 246 tctatgaactttaaggtgtatgaagtctcatagttaactcttgcagtggaacgatagaga 305 |||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||| Sbjct: 11286895 tctatgaactttaaggtgtatgaagtctcatagtcaactcttgtagcggaacgatagaga 11286836 Query: 306 ctccatttcacttaggttgatttaatttagaccagaggcagacctaagtcaaggtaatcc 365 ||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 11286835 ctctatttcacttaggttgatttaatttaggccggaggcagacctaagtcaaggtaatcc 11286776 Query: 366 tcctttgaaacactttggtattgctcctagatagatcataatacaaaaaatcaatcagag 425 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 11286775 tcctttgaaacactttggtattgctcttagatagatcataatacaaataatcaatcagag 11286716 Query: 426 cacagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatctt 485 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11286715 cgcagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatctt 11286656 Query: 486 taaatcagtttatgaaagagcccaatgcnnnnnnntgcatgttgggtctttgaaacagtt 545 | ||||||| || |||||||||||||| ||||||||||||||||||||||||| Sbjct: 11286655 tctatcagttgataaaagagcccaatgcaaaaaaatgcatgttgggtctttgaaacagtt 11286596 Query: 546 caaatcatttcgataataatccgtttgatctgtttta 582 | ||||||||||||||||||||||||||||||||||| Sbjct: 11286595 cgaatcatttcgataataatccgtttgatctgtttta 11286559 Score = 856 bits (432), Expect = 0.0 Identities = 539/577 (93%) Strand = Plus / Minus Query: 6 ggagcttattatgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcata 65 |||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||| Sbjct: 5610011 ggagcttattatgcaatgaacatagtggatcttcttgcaaaatcaatgtcttacttcatg 5609952 Query: 66 gattcgagagaataggagaacagtagcctgacaaacagtcggttcagtccgattcaggtg 125 |||||||||||||||||||| ||| |||||||||| ||| ||||||||||||||||||| Sbjct: 5609951 gattcgagagaataggagaaaagtcgcctgacaaatagttggttcagtccgattcaggta 5609892 Query: 126 ccaattcaggtgcctaatcaaatagaacccttatggatttgctagttgataaggtaaata 185 ||||| ||||||||||| ||||||||||| |||| ||||||||||||||||||||||||| Sbjct: 5609891 ccaatccaggtgcctaaacaaatagaacctttattgatttgctagttgataaggtaaata 5609832 Query: 186 tccagcccactaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgt 245 |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| || Sbjct: 5609831 tccagcccactaaatgctaggcttaatgaggataagggcctccaaaaaaattctttttgt 5609772 Query: 246 tctatgaactttaaggtgtatgaagtctcatagttaactcttgcagtggaacgatagaga 305 |||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||| Sbjct: 5609771 tctatgaactttaaggtgtatgaagtctcatagtcaactcttgtagcggaacgatagaga 5609712 Query: 306 ctccatttcacttaggttgatttaatttagaccagaggcagacctaagtcaaggtaatcc 365 ||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 5609711 ctctatttcacttaggttgatttaatttaggccggaggcagacctaagtcaaggtaatcc 5609652 Query: 366 tcctttgaaacactttggtattgctcctagatagatcataatacaaaaaatcaatcagag 425 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 5609651 tcctttgaaacactttggtattgctcttagatagatcataatacaaataatcaatcagag 5609592 Query: 426 cacagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatctt 485 | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5609591 cgcagggagtcatctcattatctttccgtaaagaaaaactatggtggactaactgatctt 5609532 Query: 486 taaatcagtttatgaaagagcccaatgcnnnnnnntgcatgttgggtctttgaaacagtt 545 | ||||||| || |||||||||||||| ||||||||||||||||||||||||| Sbjct: 5609531 tctatcagttgataaaagagcccaatgcaaaaaaatgcatgttgggtctttgaaacagtt 5609472 Query: 546 caaatcatttcgataataatccgtttgatctgtttta 582 | ||||||||||||||||||||||||||||||||||| Sbjct: 5609471 cgaatcatttcgataataatccgtttgatctgtttta 5609435 Score = 353 bits (178), Expect = 4e-94 Identities = 243/265 (91%), Gaps = 6/265 (2%) Strand = Plus / Minus Query: 129 attcaggtgcctaatcaaatagaacccttatggatttgctagttgataaggtaaatatcc 188 ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct: 13444684 attcaggtgcctaatcaaatagaacccttattgatttgctagtttcaaaggtaaatatcc 13444625 Query: 189 agcccactaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttct 248 ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 13444624 agcccactaaatgctaggcgtaatgagga------cctccaaaaaaattcttttcgttct 13444571 Query: 249 atgaactttaaggtgtatgaagtctcatagttaactcttgcagtggaacgatagagactc 308 || |||||||||||||||||||||||||| | |||||||||| ||||||||||||||| Sbjct: 13444570 ataaactttaaggtgtatgaagtctcatattccactcttgcagcagaacgatagagactc 13444511 Query: 309 catttcacttaggttgatttaatttagaccagaggcagacctaagtcaaggtaatcctcc 368 ||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||| | Sbjct: 13444510 catttaacttaggttgatttaatttaggccggaggcagacctaagtcaaggtaatccttc 13444451 Query: 369 tttgaaacactttggtattgctcct 393 |||||||||||||||||||||||| Sbjct: 13444450 attgaaacactttggtattgctcct 13444426 Score = 353 bits (178), Expect = 4e-94 Identities = 243/265 (91%), Gaps = 6/265 (2%) Strand = Plus / Plus Query: 129 attcaggtgcctaatcaaatagaacccttatggatttgctagttgataaggtaaatatcc 188 ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct: 8529634 attcaggtgcctaatcaaatagaacccttattgatttgctagtttcaaaggtaaatatcc 8529693 Query: 189 agcccactaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttct 248 ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 8529694 agcccactaaatgctaggcgtaatgagga------cctccaaaaaaattcttttcgttct 8529747 Query: 249 atgaactttaaggtgtatgaagtctcatagttaactcttgcagtggaacgatagagactc 308 |||||||||||||||||| |||||||||| | |||||||||| ||||||||||||||| Sbjct: 8529748 atgaactttaaggtgtataaagtctcatattccactcttgcagcagaacgatagagactc 8529807 Query: 309 catttcacttaggttgatttaatttagaccagaggcagacctaagtcaaggtaatcctcc 368 ||||| ||||||||||||||||||||| || |||||| |||||||||||||||||||| | Sbjct: 8529808 catttaacttaggttgatttaatttaggccggaggcaaacctaagtcaaggtaatccttc 8529867 Query: 369 tttgaaacactttggtattgctcct 393 ||||||||||||||||||||||||| Sbjct: 8529868 tttgaaacactttggtattgctcct 8529892 Score = 194 bits (98), Expect = 2e-46 Identities = 116/122 (95%) Strand = Plus / Plus Query: 6 ggagcttattatgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcata 65 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 8529523 ggagcttattatgcaatgaacataatggatcttattgcaaaatcaatgtcttacttcatg 8529582 Query: 66 gattcgagagaataggagaacagtagcctgacaaacagtcggttcagtccgattcaggtg 125 |||| |||||||||||||||||||||||| ||||| ||| |||||||||||||||||||| Sbjct: 8529583 gatttgagagaataggagaacagtagcctaacaaatagttggttcagtccgattcaggtg 8529642 Query: 126 cc 127 || Sbjct: 8529643 cc 8529644 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 66 gattcgagagaataggagaacagtagcctgacaaacagtcggttcagtccgatt 119 |||||||||||||||||||| ||| |||||||||| ||| |||||||||||||| Sbjct: 21082558 gattcgagagaataggagaatagttgcctgacaaatagttggttcagtccgatt 21082611 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 106 ggttcagtccgattcaggtgcc 127 |||||||||||||||||||||| Sbjct: 13444695 ggttcagtccgattcaggtgcc 13444674 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 ttattatgcaatgaacataat 31 ||||||||||||||||||||| Sbjct: 15232920 ttattatgcaatgaacataat 15232900
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 880 bits (444), Expect = 0.0 Identities = 542/577 (93%) Strand = Plus / Plus Query: 6 ggagcttattatgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcata 65 |||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||| Sbjct: 19943629 ggagcttattatgcaatgaacatagtggatcttcttgcaaaatcaatgtcttacttcatg 19943688 Query: 66 gattcgagagaataggagaacagtagcctgacaaacagtcggttcagtccgattcaggtg 125 |||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||| Sbjct: 19943689 gattcgagagaataggagaacagtcgcctgacaaatagttggttcagtccgattcaggta 19943748 Query: 126 ccaattcaggtgcctaatcaaatagaacccttatggatttgctagttgataaggtaaata 185 ||||| ||||||||||| ||||||||||| |||| ||||||||||||||||||||||||| Sbjct: 19943749 ccaatccaggtgcctaaacaaatagaacctttattgatttgctagttgataaggtaaata 19943808 Query: 186 tccagcccactaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgt 245 |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 19943809 tccagcccactaaatgctaggcttaatgaggataagggcctccaaaaaaattcttttcgt 19943868 Query: 246 tctatgaactttaaggtgtatgaagtctcatagttaactcttgcagtggaacgatagaga 305 |||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||| Sbjct: 19943869 tctatgaactttaaggtgtatgaagtctcatagtcaactcttgtagcggaacgatagaga 19943928 Query: 306 ctccatttcacttaggttgatttaatttagaccagaggcagacctaagtcaaggtaatcc 365 ||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 19943929 ctctatttcacttaggttgatttaatttaggccggaggcagacctaagtcaaggtaatcc 19943988 Query: 366 tcctttgaaacactttggtattgctcctagatagatcataatacaaaaaatcaatcagag 425 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 19943989 tcctttgaaacactttggtattgctcttagatagatcataatacaaataatcaatcagag 19944048 Query: 426 cacagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatctt 485 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19944049 cgcagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatctt 19944108 Query: 486 taaatcagtttatgaaagagcccaatgcnnnnnnntgcatgttgggtctttgaaacagtt 545 | ||||||| || |||||||||||||| ||||||||||||||||||||||||| Sbjct: 19944109 tctatcagttgataaaagagcccaatgcaaaaaaatgcatgttgggtctttgaaacagtt 19944168 Query: 546 caaatcatttcgataataatccgtttgatctgtttta 582 | ||||||||||||||||||||||||||||||||||| Sbjct: 19944169 cgaatcatttcgataataatccgtttgatctgtttta 19944205 Score = 872 bits (440), Expect = 0.0 Identities = 541/577 (93%) Strand = Plus / Minus Query: 6 ggagcttattatgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcata 65 |||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||| Sbjct: 10342783 ggagcttattatgcaatgaacatagtggatcttcttgcaaaatcaatgtcttacttcatg 10342724 Query: 66 gattcgagagaataggagaacagtagcctgacaaacagtcggttcagtccgattcaggtg 125 |||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||| Sbjct: 10342723 gattcgagagaataggagaacagtcgcctgacaaatagttggttcagtccgattcaggta 10342664 Query: 126 ccaattcaggtgcctaatcaaatagaacccttatggatttgctagttgataaggtaaata 185 ||||| ||||||||||| ||||||||||| |||| ||||||||||||||||||||||||| Sbjct: 10342663 ccaatccaggtgcctaaacaaatagaacctttattgatttgctagttgataaggtaaata 10342604 Query: 186 tccagcccactaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgt 245 |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 10342603 tccagcccactaaatgctaggcttaatgaggataagggcctccaaaaaaattcttttcgt 10342544 Query: 246 tctatgaactttaaggtgtatgaagtctcatagttaactcttgcagtggaacgatagaga 305 |||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||| Sbjct: 10342543 tctatgaactttaaggtgtatgaagtctcatagtcaactcttgtagcggaacgatagaga 10342484 Query: 306 ctccatttcacttaggttgatttaatttagaccagaggcagacctaagtcaaggtaatcc 365 ||| |||||||||||||||||||||||||| || |||| ||||||||||||||||||||| Sbjct: 10342483 ctctatttcacttaggttgatttaatttaggccggaggtagacctaagtcaaggtaatcc 10342424 Query: 366 tcctttgaaacactttggtattgctcctagatagatcataatacaaaaaatcaatcagag 425 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 10342423 tcctttgaaacactttggtattgctcttagatagatcataatacaaataatcaatcagag 10342364 Query: 426 cacagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatctt 485 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10342363 cgcagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatctt 10342304 Query: 486 taaatcagtttatgaaagagcccaatgcnnnnnnntgcatgttgggtctttgaaacagtt 545 | ||||||| || |||||||||||||| ||||||||||||||||||||||||| Sbjct: 10342303 tctatcagttgataaaagagcccaatgcaaaaaaatgcatgttgggtctttgaaacagtt 10342244 Query: 546 caaatcatttcgataataatccgtttgatctgtttta 582 | ||||||||||||||||||||||||||||||||||| Sbjct: 10342243 cgaatcatttcgataataatccgtttgatctgtttta 10342207 Score = 161 bits (81), Expect = 3e-36 Identities = 93/97 (95%) Strand = Plus / Minus Query: 294 gaacgatagagactccatttcacttaggttgatttaatttagaccagaggcagacctaag 353 |||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||| Sbjct: 14019502 gaacgatagagactccatttaacttaggttgatttaatttaggccggaggcagacctaag 14019443 Query: 354 tcaaggtaatcctcctttgaaacactttggtattgct 390 ||||||||||||| ||||||||||||||||||||||| Sbjct: 14019442 tcaaggtaatccttctttgaaacactttggtattgct 14019406
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 880 bits (444), Expect = 0.0 Identities = 542/577 (93%) Strand = Plus / Minus Query: 6 ggagcttattatgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcata 65 |||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||| Sbjct: 31605865 ggagcttattatgcaatgaacatagtggatcttcttgcaaaatcaatgtcttacttcatg 31605806 Query: 66 gattcgagagaataggagaacagtagcctgacaaacagtcggttcagtccgattcaggtg 125 |||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||| Sbjct: 31605805 gattcgagagaataggagaacagtcgcctgacaaatagttggttcagtccgattcaggta 31605746 Query: 126 ccaattcaggtgcctaatcaaatagaacccttatggatttgctagttgataaggtaaata 185 ||||| ||||||||||| ||||||||||| |||| ||||||||||||||||||||||||| Sbjct: 31605745 ccaatccaggtgcctaaacaaatagaacctttattgatttgctagttgataaggtaaata 31605686 Query: 186 tccagcccactaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgt 245 |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 31605685 tccagcccactaaatgctaggcttaatgaggataagggcctccaaaaaaattcttttcgt 31605626 Query: 246 tctatgaactttaaggtgtatgaagtctcatagttaactcttgcagtggaacgatagaga 305 |||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||| Sbjct: 31605625 tctatgaactttaaggtgtatgaagtctcatagtcaactcttgtagcggaacgatagaga 31605566 Query: 306 ctccatttcacttaggttgatttaatttagaccagaggcagacctaagtcaaggtaatcc 365 ||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 31605565 ctctatttcacttaggttgatttaatttaggccggaggcagacctaagtcaaggtaatcc 31605506 Query: 366 tcctttgaaacactttggtattgctcctagatagatcataatacaaaaaatcaatcagag 425 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 31605505 tcctttgaaacactttggtattgctcttagatagatcataatacaaataatcaatcagag 31605446 Query: 426 cacagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatctt 485 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31605445 cgcagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatctt 31605386 Query: 486 taaatcagtttatgaaagagcccaatgcnnnnnnntgcatgttgggtctttgaaacagtt 545 | ||||||| || |||||||||||||| ||||||||||||||||||||||||| Sbjct: 31605385 tctatcagttgataaaagagcccaatgcaaaaaaatgcatgttgggtctttgaaacagtt 31605326 Query: 546 caaatcatttcgataataatccgtttgatctgtttta 582 | ||||||||||||||||||||||||||||||||||| Sbjct: 31605325 cgaatcatttcgataataatccgtttgatctgtttta 31605289
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 880 bits (444), Expect = 0.0 Identities = 542/577 (93%) Strand = Plus / Minus Query: 6 ggagcttattatgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcata 65 |||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||| Sbjct: 42414 ggagcttattatgcaatgaacatagtggatcttcttgcaaaatcaatgtcttacttcatg 42355 Query: 66 gattcgagagaataggagaacagtagcctgacaaacagtcggttcagtccgattcaggtg 125 |||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||| Sbjct: 42354 gattcgagagaataggagaacagtcgcctgacaaatagttggttcagtccgattcaggta 42295 Query: 126 ccaattcaggtgcctaatcaaatagaacccttatggatttgctagttgataaggtaaata 185 ||||| ||||||||||| ||||||||||| |||| ||||||||||||||||||||||||| Sbjct: 42294 ccaatccaggtgcctaaacaaatagaacctttattgatttgctagttgataaggtaaata 42235 Query: 186 tccagcccactaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgt 245 |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 42234 tccagcccactaaatgctaggcttaatgaggataagggcctccaaaaaaattcttttcgt 42175 Query: 246 tctatgaactttaaggtgtatgaagtctcatagttaactcttgcagtggaacgatagaga 305 |||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||| Sbjct: 42174 tctatgaactttaaggtgtatgaagtctcatagtcaactcttgtagcggaacgatagaga 42115 Query: 306 ctccatttcacttaggttgatttaatttagaccagaggcagacctaagtcaaggtaatcc 365 ||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 42114 ctctatttcacttaggttgatttaatttaggccggaggcagacctaagtcaaggtaatcc 42055 Query: 366 tcctttgaaacactttggtattgctcctagatagatcataatacaaaaaatcaatcagag 425 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 42054 tcctttgaaacactttggtattgctcttagatagatcataatacaaataatcaatcagag 41995 Query: 426 cacagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatctt 485 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 41994 cgcagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatctt 41935 Query: 486 taaatcagtttatgaaagagcccaatgcnnnnnnntgcatgttgggtctttgaaacagtt 545 | ||||||| || |||||||||||||| ||||||||||||||||||||||||| Sbjct: 41934 tctatcagttgataaaagagcccaatgcaaaaaaatgcatgttgggtctttgaaacagtt 41875 Query: 546 caaatcatttcgataataatccgtttgatctgtttta 582 | ||||||||||||||||||||||||||||||||||| Sbjct: 41874 cgaatcatttcgataataatccgtttgatctgtttta 41838
>dbj|AK070348.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023051D08, full insert sequence Length = 599 Score = 880 bits (444), Expect = 0.0 Identities = 542/577 (93%) Strand = Plus / Plus Query: 6 ggagcttattatgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcata 65 |||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||| Sbjct: 21 ggagcttattatgcaatgaacatagtggatcttcttgcaaaatcaatgtcttacttcatg 80 Query: 66 gattcgagagaataggagaacagtagcctgacaaacagtcggttcagtccgattcaggtg 125 |||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||| Sbjct: 81 gattcgagagaataggagaacagtcgcctgacaaatagttggttcagtccgattcaggta 140 Query: 126 ccaattcaggtgcctaatcaaatagaacccttatggatttgctagttgataaggtaaata 185 ||||| ||||||||||| ||||||||||| |||| ||||||||||||||||||||||||| Sbjct: 141 ccaatccaggtgcctaaacaaatagaacctttattgatttgctagttgataaggtaaata 200 Query: 186 tccagcccactaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgt 245 |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 201 tccagcccactaaatgctaggcttaatgaggataagggcctccaaaaaaattcttttcgt 260 Query: 246 tctatgaactttaaggtgtatgaagtctcatagttaactcttgcagtggaacgatagaga 305 |||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||| Sbjct: 261 tctatgaactttaaggtgtatgaagtctcatagtcaactcttgtagcggaacgatagaga 320 Query: 306 ctccatttcacttaggttgatttaatttagaccagaggcagacctaagtcaaggtaatcc 365 ||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 321 ctctatttcacttaggttgatttaatttaggccggaggcagacctaagtcaaggtaatcc 380 Query: 366 tcctttgaaacactttggtattgctcctagatagatcataatacaaaaaatcaatcagag 425 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 381 tcctttgaaacactttggtattgctcttagatagatcataatacaaataatcaatcagag 440 Query: 426 cacagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatctt 485 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 441 cgcagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatctt 500 Query: 486 taaatcagtttatgaaagagcccaatgcnnnnnnntgcatgttgggtctttgaaacagtt 545 | ||||||| || |||||||||||||| ||||||||||||||||||||||||| Sbjct: 501 tctatcagttgataaaagagcccaatgcaaaaaaatgcatgttgggtctttgaaacagtt 560 Query: 546 caaatcatttcgataataatccgtttgatctgtttta 582 | ||||||||||||||||||||||||||||||||||| Sbjct: 561 cgaatcatttcgataataatccgtttgatctgtttta 597
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 880 bits (444), Expect = 0.0 Identities = 542/577 (93%) Strand = Plus / Plus Query: 6 ggagcttattatgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcata 65 |||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||| Sbjct: 19954905 ggagcttattatgcaatgaacatagtggatcttcttgcaaaatcaatgtcttacttcatg 19954964 Query: 66 gattcgagagaataggagaacagtagcctgacaaacagtcggttcagtccgattcaggtg 125 |||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||| Sbjct: 19954965 gattcgagagaataggagaacagtcgcctgacaaatagttggttcagtccgattcaggta 19955024 Query: 126 ccaattcaggtgcctaatcaaatagaacccttatggatttgctagttgataaggtaaata 185 ||||| ||||||||||| ||||||||||| |||| ||||||||||||||||||||||||| Sbjct: 19955025 ccaatccaggtgcctaaacaaatagaacctttattgatttgctagttgataaggtaaata 19955084 Query: 186 tccagcccactaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgt 245 |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 19955085 tccagcccactaaatgctaggcttaatgaggataagggcctccaaaaaaattcttttcgt 19955144 Query: 246 tctatgaactttaaggtgtatgaagtctcatagttaactcttgcagtggaacgatagaga 305 |||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||| Sbjct: 19955145 tctatgaactttaaggtgtatgaagtctcatagtcaactcttgtagcggaacgatagaga 19955204 Query: 306 ctccatttcacttaggttgatttaatttagaccagaggcagacctaagtcaaggtaatcc 365 ||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 19955205 ctctatttcacttaggttgatttaatttaggccggaggcagacctaagtcaaggtaatcc 19955264 Query: 366 tcctttgaaacactttggtattgctcctagatagatcataatacaaaaaatcaatcagag 425 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 19955265 tcctttgaaacactttggtattgctcttagatagatcataatacaaataatcaatcagag 19955324 Query: 426 cacagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatctt 485 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19955325 cgcagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatctt 19955384 Query: 486 taaatcagtttatgaaagagcccaatgcnnnnnnntgcatgttgggtctttgaaacagtt 545 | ||||||| || |||||||||||||| ||||||||||||||||||||||||| Sbjct: 19955385 tctatcagttgataaaagagcccaatgcaaaaaaatgcatgttgggtctttgaaacagtt 19955444 Query: 546 caaatcatttcgataataatccgtttgatctgtttta 582 | ||||||||||||||||||||||||||||||||||| Sbjct: 19955445 cgaatcatttcgataataatccgtttgatctgtttta 19955481 Score = 872 bits (440), Expect = 0.0 Identities = 541/577 (93%) Strand = Plus / Minus Query: 6 ggagcttattatgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcata 65 |||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||| Sbjct: 10348822 ggagcttattatgcaatgaacatagtggatcttcttgcaaaatcaatgtcttacttcatg 10348763 Query: 66 gattcgagagaataggagaacagtagcctgacaaacagtcggttcagtccgattcaggtg 125 |||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||| Sbjct: 10348762 gattcgagagaataggagaacagtcgcctgacaaatagttggttcagtccgattcaggta 10348703 Query: 126 ccaattcaggtgcctaatcaaatagaacccttatggatttgctagttgataaggtaaata 185 ||||| ||||||||||| ||||||||||| |||| ||||||||||||||||||||||||| Sbjct: 10348702 ccaatccaggtgcctaaacaaatagaacctttattgatttgctagttgataaggtaaata 10348643 Query: 186 tccagcccactaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgt 245 |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 10348642 tccagcccactaaatgctaggcttaatgaggataagggcctccaaaaaaattcttttcgt 10348583 Query: 246 tctatgaactttaaggtgtatgaagtctcatagttaactcttgcagtggaacgatagaga 305 |||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||| Sbjct: 10348582 tctatgaactttaaggtgtatgaagtctcatagtcaactcttgtagcggaacgatagaga 10348523 Query: 306 ctccatttcacttaggttgatttaatttagaccagaggcagacctaagtcaaggtaatcc 365 ||| |||||||||||||||||||||||||| || |||| ||||||||||||||||||||| Sbjct: 10348522 ctctatttcacttaggttgatttaatttaggccggaggtagacctaagtcaaggtaatcc 10348463 Query: 366 tcctttgaaacactttggtattgctcctagatagatcataatacaaaaaatcaatcagag 425 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 10348462 tcctttgaaacactttggtattgctcttagatagatcataatacaaataatcaatcagag 10348403 Query: 426 cacagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatctt 485 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10348402 cgcagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatctt 10348343 Query: 486 taaatcagtttatgaaagagcccaatgcnnnnnnntgcatgttgggtctttgaaacagtt 545 | ||||||| || |||||||||||||| ||||||||||||||||||||||||| Sbjct: 10348342 tctatcagttgataaaagagcccaatgcaaaaaaatgcatgttgggtctttgaaacagtt 10348283 Query: 546 caaatcatttcgataataatccgtttgatctgtttta 582 | ||||||||||||||||||||||||||||||||||| Sbjct: 10348282 cgaatcatttcgataataatccgtttgatctgtttta 10348246 Score = 161 bits (81), Expect = 3e-36 Identities = 93/97 (95%) Strand = Plus / Minus Query: 294 gaacgatagagactccatttcacttaggttgatttaatttagaccagaggcagacctaag 353 |||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||| Sbjct: 14027744 gaacgatagagactccatttaacttaggttgatttaatttaggccggaggcagacctaag 14027685 Query: 354 tcaaggtaatcctcctttgaaacactttggtattgct 390 ||||||||||||| ||||||||||||||||||||||| Sbjct: 14027684 tcaaggtaatccttctttgaaacactttggtattgct 14027648
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 880 bits (444), Expect = 0.0 Identities = 542/577 (93%) Strand = Plus / Minus Query: 6 ggagcttattatgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcata 65 |||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||| Sbjct: 11286806 ggagcttattatgcaatgaacatagtggatcttcttgcaaaatcaatgtcttacttcatg 11286747 Query: 66 gattcgagagaataggagaacagtagcctgacaaacagtcggttcagtccgattcaggtg 125 |||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||| Sbjct: 11286746 gattcgagagaataggagaacagtcgcctgacaaatagttggttcagtccgattcaggta 11286687 Query: 126 ccaattcaggtgcctaatcaaatagaacccttatggatttgctagttgataaggtaaata 185 ||||| ||||||||||| ||||||||||| |||| ||||||||||||||||||||||||| Sbjct: 11286686 ccaatccaggtgcctaaacaaatagaacctttattgatttgctagttgataaggtaaata 11286627 Query: 186 tccagcccactaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgt 245 |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 11286626 tccagcccactaaatgctaggcttaatgaggataagggcctccaaaaaaattcttttcgt 11286567 Query: 246 tctatgaactttaaggtgtatgaagtctcatagttaactcttgcagtggaacgatagaga 305 |||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||| Sbjct: 11286566 tctatgaactttaaggtgtatgaagtctcatagtcaactcttgtagcggaacgatagaga 11286507 Query: 306 ctccatttcacttaggttgatttaatttagaccagaggcagacctaagtcaaggtaatcc 365 ||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 11286506 ctctatttcacttaggttgatttaatttaggccggaggcagacctaagtcaaggtaatcc 11286447 Query: 366 tcctttgaaacactttggtattgctcctagatagatcataatacaaaaaatcaatcagag 425 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 11286446 tcctttgaaacactttggtattgctcttagatagatcataatacaaataatcaatcagag 11286387 Query: 426 cacagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatctt 485 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11286386 cgcagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatctt 11286327 Query: 486 taaatcagtttatgaaagagcccaatgcnnnnnnntgcatgttgggtctttgaaacagtt 545 | ||||||| || |||||||||||||| ||||||||||||||||||||||||| Sbjct: 11286326 tctatcagttgataaaagagcccaatgcaaaaaaatgcatgttgggtctttgaaacagtt 11286267 Query: 546 caaatcatttcgataataatccgtttgatctgtttta 582 | ||||||||||||||||||||||||||||||||||| Sbjct: 11286266 cgaatcatttcgataataatccgtttgatctgtttta 11286230 Score = 856 bits (432), Expect = 0.0 Identities = 539/577 (93%) Strand = Plus / Minus Query: 6 ggagcttattatgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcata 65 |||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||| Sbjct: 5610000 ggagcttattatgcaatgaacatagtggatcttcttgcaaaatcaatgtcttacttcatg 5609941 Query: 66 gattcgagagaataggagaacagtagcctgacaaacagtcggttcagtccgattcaggtg 125 |||||||||||||||||||| ||| |||||||||| ||| ||||||||||||||||||| Sbjct: 5609940 gattcgagagaataggagaaaagtcgcctgacaaatagttggttcagtccgattcaggta 5609881 Query: 126 ccaattcaggtgcctaatcaaatagaacccttatggatttgctagttgataaggtaaata 185 ||||| ||||||||||| ||||||||||| |||| ||||||||||||||||||||||||| Sbjct: 5609880 ccaatccaggtgcctaaacaaatagaacctttattgatttgctagttgataaggtaaata 5609821 Query: 186 tccagcccactaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgt 245 |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| || Sbjct: 5609820 tccagcccactaaatgctaggcttaatgaggataagggcctccaaaaaaattctttttgt 5609761 Query: 246 tctatgaactttaaggtgtatgaagtctcatagttaactcttgcagtggaacgatagaga 305 |||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||| Sbjct: 5609760 tctatgaactttaaggtgtatgaagtctcatagtcaactcttgtagcggaacgatagaga 5609701 Query: 306 ctccatttcacttaggttgatttaatttagaccagaggcagacctaagtcaaggtaatcc 365 ||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 5609700 ctctatttcacttaggttgatttaatttaggccggaggcagacctaagtcaaggtaatcc 5609641 Query: 366 tcctttgaaacactttggtattgctcctagatagatcataatacaaaaaatcaatcagag 425 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 5609640 tcctttgaaacactttggtattgctcttagatagatcataatacaaataatcaatcagag 5609581 Query: 426 cacagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatctt 485 | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5609580 cgcagggagtcatctcattatctttccgtaaagaaaaactatggtggactaactgatctt 5609521 Query: 486 taaatcagtttatgaaagagcccaatgcnnnnnnntgcatgttgggtctttgaaacagtt 545 | ||||||| || |||||||||||||| ||||||||||||||||||||||||| Sbjct: 5609520 tctatcagttgataaaagagcccaatgcaaaaaaatgcatgttgggtctttgaaacagtt 5609461 Query: 546 caaatcatttcgataataatccgtttgatctgtttta 582 | ||||||||||||||||||||||||||||||||||| Sbjct: 5609460 cgaatcatttcgataataatccgtttgatctgtttta 5609424 Score = 353 bits (178), Expect = 4e-94 Identities = 243/265 (91%), Gaps = 6/265 (2%) Strand = Plus / Minus Query: 129 attcaggtgcctaatcaaatagaacccttatggatttgctagttgataaggtaaatatcc 188 ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct: 13398958 attcaggtgcctaatcaaatagaacccttattgatttgctagtttcaaaggtaaatatcc 13398899 Query: 189 agcccactaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttct 248 ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 13398898 agcccactaaatgctaggcgtaatgagga------cctccaaaaaaattcttttcgttct 13398845 Query: 249 atgaactttaaggtgtatgaagtctcatagttaactcttgcagtggaacgatagagactc 308 || |||||||||||||||||||||||||| | |||||||||| ||||||||||||||| Sbjct: 13398844 ataaactttaaggtgtatgaagtctcatattccactcttgcagcagaacgatagagactc 13398785 Query: 309 catttcacttaggttgatttaatttagaccagaggcagacctaagtcaaggtaatcctcc 368 ||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||| | Sbjct: 13398784 catttaacttaggttgatttaatttaggccggaggcagacctaagtcaaggtaatccttc 13398725 Query: 369 tttgaaacactttggtattgctcct 393 |||||||||||||||||||||||| Sbjct: 13398724 attgaaacactttggtattgctcct 13398700 Score = 353 bits (178), Expect = 4e-94 Identities = 243/265 (91%), Gaps = 6/265 (2%) Strand = Plus / Plus Query: 129 attcaggtgcctaatcaaatagaacccttatggatttgctagttgataaggtaaatatcc 188 ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct: 8529517 attcaggtgcctaatcaaatagaacccttattgatttgctagtttcaaaggtaaatatcc 8529576 Query: 189 agcccactaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttct 248 ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 8529577 agcccactaaatgctaggcgtaatgagga------cctccaaaaaaattcttttcgttct 8529630 Query: 249 atgaactttaaggtgtatgaagtctcatagttaactcttgcagtggaacgatagagactc 308 |||||||||||||||||| |||||||||| | |||||||||| ||||||||||||||| Sbjct: 8529631 atgaactttaaggtgtataaagtctcatattccactcttgcagcagaacgatagagactc 8529690 Query: 309 catttcacttaggttgatttaatttagaccagaggcagacctaagtcaaggtaatcctcc 368 ||||| ||||||||||||||||||||| || |||||| |||||||||||||||||||| | Sbjct: 8529691 catttaacttaggttgatttaatttaggccggaggcaaacctaagtcaaggtaatccttc 8529750 Query: 369 tttgaaacactttggtattgctcct 393 ||||||||||||||||||||||||| Sbjct: 8529751 tttgaaacactttggtattgctcct 8529775 Score = 194 bits (98), Expect = 2e-46 Identities = 116/122 (95%) Strand = Plus / Plus Query: 6 ggagcttattatgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcata 65 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 8529406 ggagcttattatgcaatgaacataatggatcttattgcaaaatcaatgtcttacttcatg 8529465 Query: 66 gattcgagagaataggagaacagtagcctgacaaacagtcggttcagtccgattcaggtg 125 |||| |||||||||||||||||||||||| ||||| ||| |||||||||||||||||||| Sbjct: 8529466 gatttgagagaataggagaacagtagcctaacaaatagttggttcagtccgattcaggtg 8529525 Query: 126 cc 127 || Sbjct: 8529526 cc 8529527 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 66 gattcgagagaataggagaacagtagcctgacaaacagtcggttcagtccgatt 119 |||||||||||||||||||| ||| |||||||||| ||| |||||||||||||| Sbjct: 21008767 gattcgagagaataggagaatagttgcctgacaaatagttggttcagtccgatt 21008820 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Minus Query: 106 ggttcagtccgattcaggtgcc 127 |||||||||||||||||||||| Sbjct: 13398969 ggttcagtccgattcaggtgcc 13398948 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 ttattatgcaatgaacataat 31 ||||||||||||||||||||| Sbjct: 15187203 ttattatgcaatgaacataat 15187183
>emb|BX119951.3|CNS09S4U Oryza sativa chromosome 12, . BAC OJ1523_A01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 127267 Score = 880 bits (444), Expect = 0.0 Identities = 542/577 (93%) Strand = Plus / Plus Query: 6 ggagcttattatgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcata 65 |||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||| Sbjct: 84919 ggagcttattatgcaatgaacatagtggatcttcttgcaaaatcaatgtcttacttcatg 84978 Query: 66 gattcgagagaataggagaacagtagcctgacaaacagtcggttcagtccgattcaggtg 125 |||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||| Sbjct: 84979 gattcgagagaataggagaacagtcgcctgacaaatagttggttcagtccgattcaggta 85038 Query: 126 ccaattcaggtgcctaatcaaatagaacccttatggatttgctagttgataaggtaaata 185 ||||| ||||||||||| ||||||||||| |||| ||||||||||||||||||||||||| Sbjct: 85039 ccaatccaggtgcctaaacaaatagaacctttattgatttgctagttgataaggtaaata 85098 Query: 186 tccagcccactaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgt 245 |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 85099 tccagcccactaaatgctaggcttaatgaggataagggcctccaaaaaaattcttttcgt 85158 Query: 246 tctatgaactttaaggtgtatgaagtctcatagttaactcttgcagtggaacgatagaga 305 |||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||| Sbjct: 85159 tctatgaactttaaggtgtatgaagtctcatagtcaactcttgtagcggaacgatagaga 85218 Query: 306 ctccatttcacttaggttgatttaatttagaccagaggcagacctaagtcaaggtaatcc 365 ||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 85219 ctctatttcacttaggttgatttaatttaggccggaggcagacctaagtcaaggtaatcc 85278 Query: 366 tcctttgaaacactttggtattgctcctagatagatcataatacaaaaaatcaatcagag 425 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 85279 tcctttgaaacactttggtattgctcttagatagatcataatacaaataatcaatcagag 85338 Query: 426 cacagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatctt 485 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 85339 cgcagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatctt 85398 Query: 486 taaatcagtttatgaaagagcccaatgcnnnnnnntgcatgttgggtctttgaaacagtt 545 | ||||||| || |||||||||||||| ||||||||||||||||||||||||| Sbjct: 85399 tctatcagttgataaaagagcccaatgcaaaaaaatgcatgttgggtctttgaaacagtt 85458 Query: 546 caaatcatttcgataataatccgtttgatctgtttta 582 | ||||||||||||||||||||||||||||||||||| Sbjct: 85459 cgaatcatttcgataataatccgtttgatctgtttta 85495
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 872 bits (440), Expect = 0.0 Identities = 541/577 (93%) Strand = Plus / Minus Query: 6 ggagcttattatgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcata 65 |||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||| Sbjct: 49175 ggagcttattatgcaatgaacatagtggatcttcttgcaaaatcaatgtcttacttcatg 49116 Query: 66 gattcgagagaataggagaacagtagcctgacaaacagtcggttcagtccgattcaggtg 125 |||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||| Sbjct: 49115 gattcgagagaataggagaacagtcgcctgacaaatagttggttcagtccgattcaggta 49056 Query: 126 ccaattcaggtgcctaatcaaatagaacccttatggatttgctagttgataaggtaaata 185 ||||| ||||||||||| ||||||||||| |||| ||||||||||||||||||||||||| Sbjct: 49055 ccaatccaggtgcctaaacaaatagaacctttattgatttgctagttgataaggtaaata 48996 Query: 186 tccagcccactaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgt 245 |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 48995 tccagcccactaaatgctaggcttaatgaggataagggcctccaaaaaaattcttttcgt 48936 Query: 246 tctatgaactttaaggtgtatgaagtctcatagttaactcttgcagtggaacgatagaga 305 |||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||| Sbjct: 48935 tctatgaactttaaggtgtatgaagtctcatagtcaactcttgtagcggaacgatagaga 48876 Query: 306 ctccatttcacttaggttgatttaatttagaccagaggcagacctaagtcaaggtaatcc 365 ||| |||||||||||||||||||||||||| || |||| ||||||||||||||||||||| Sbjct: 48875 ctctatttcacttaggttgatttaatttaggccggaggtagacctaagtcaaggtaatcc 48816 Query: 366 tcctttgaaacactttggtattgctcctagatagatcataatacaaaaaatcaatcagag 425 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 48815 tcctttgaaacactttggtattgctcttagatagatcataatacaaataatcaatcagag 48756 Query: 426 cacagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatctt 485 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 48755 cgcagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatctt 48696 Query: 486 taaatcagtttatgaaagagcccaatgcnnnnnnntgcatgttgggtctttgaaacagtt 545 | ||||||| || |||||||||||||| ||||||||||||||||||||||||| Sbjct: 48695 tctatcagttgataaaagagcccaatgcaaaaaaatgcatgttgggtctttgaaacagtt 48636 Query: 546 caaatcatttcgataataatccgtttgatctgtttta 582 | ||||||||||||||||||||||||||||||||||| Sbjct: 48635 cgaatcatttcgataataatccgtttgatctgtttta 48599
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 872 bits (440), Expect = 0.0 Identities = 541/577 (93%) Strand = Plus / Minus Query: 6 ggagcttattatgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcata 65 |||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||| Sbjct: 124108 ggagcttattatgcaatgaacatagtggatcttcttgcaaaatcaatgtcttacttcatg 124049 Query: 66 gattcgagagaataggagaacagtagcctgacaaacagtcggttcagtccgattcaggtg 125 |||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||| Sbjct: 124048 gattcgagagaataggagaacagtcgcctgacaaatagttggttcagtccgattcaggta 123989 Query: 126 ccaattcaggtgcctaatcaaatagaacccttatggatttgctagttgataaggtaaata 185 ||||| ||||||||||| ||||||||||| |||| ||||||||||||||||||||||||| Sbjct: 123988 ccaatccaggtgcctaaacaaatagaacctttattgatttgctagttgataaggtaaata 123929 Query: 186 tccagcccactaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgt 245 |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 123928 tccagcccactaaatgctaggcttaatgaggataagggcctccaaaaaaattcttttcgt 123869 Query: 246 tctatgaactttaaggtgtatgaagtctcatagttaactcttgcagtggaacgatagaga 305 |||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||| Sbjct: 123868 tctatgaactttaaggtgtatgaagtctcatagtcaactcttgtagcggaacgatagaga 123809 Query: 306 ctccatttcacttaggttgatttaatttagaccagaggcagacctaagtcaaggtaatcc 365 ||| |||||||||||||||||||||||||| || |||| ||||||||||||||||||||| Sbjct: 123808 ctctatttcacttaggttgatttaatttaggccggaggtagacctaagtcaaggtaatcc 123749 Query: 366 tcctttgaaacactttggtattgctcctagatagatcataatacaaaaaatcaatcagag 425 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 123748 tcctttgaaacactttggtattgctcttagatagatcataatacaaataatcaatcagag 123689 Query: 426 cacagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatctt 485 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123688 cgcagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatctt 123629 Query: 486 taaatcagtttatgaaagagcccaatgcnnnnnnntgcatgttgggtctttgaaacagtt 545 | ||||||| || |||||||||||||| ||||||||||||||||||||||||| Sbjct: 123628 tctatcagttgataaaagagcccaatgcaaaaaaatgcatgttgggtctttgaaacagtt 123569 Query: 546 caaatcatttcgataataatccgtttgatctgtttta 582 | ||||||||||||||||||||||||||||||||||| Sbjct: 123568 cgaatcatttcgataataatccgtttgatctgtttta 123532
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 872 bits (440), Expect = 0.0 Identities = 541/577 (93%) Strand = Plus / Minus Query: 6 ggagcttattatgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcata 65 |||||||||||||||| ||||||| | |||||| ||||||||||||||||||||||||| Sbjct: 50900 ggagcttattatgcaacgaacatagtggatcttcttgcaaaatcaatgtcttacttcatg 50841 Query: 66 gattcgagagaataggagaacagtagcctgacaaacagtcggttcagtccgattcaggtg 125 |||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||| Sbjct: 50840 gattcgagagaataggagaacagtcgcctgacaaatagttggttcagtccgattcaggta 50781 Query: 126 ccaattcaggtgcctaatcaaatagaacccttatggatttgctagttgataaggtaaata 185 ||||| ||||||||||| ||||||||||| |||| ||||||||||||||||||||||||| Sbjct: 50780 ccaatccaggtgcctaaacaaatagaacctttattgatttgctagttgataaggtaaata 50721 Query: 186 tccagcccactaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgt 245 |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 50720 tccagcccactaaatgctaggcttaatgaggataagggcctccaaaaaaattcttttcgt 50661 Query: 246 tctatgaactttaaggtgtatgaagtctcatagttaactcttgcagtggaacgatagaga 305 |||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||| Sbjct: 50660 tctatgaactttaaggtgtatgaagtctcatagtcaactcttgtagcggaacgatagaga 50601 Query: 306 ctccatttcacttaggttgatttaatttagaccagaggcagacctaagtcaaggtaatcc 365 ||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 50600 ctctatttcacttaggttgatttaatttaggccggaggcagacctaagtcaaggtaatcc 50541 Query: 366 tcctttgaaacactttggtattgctcctagatagatcataatacaaaaaatcaatcagag 425 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 50540 tcctttgaaacactttggtattgctcttagatagatcataatacaaataatcaatcagag 50481 Query: 426 cacagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatctt 485 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50480 cgcagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatctt 50421 Query: 486 taaatcagtttatgaaagagcccaatgcnnnnnnntgcatgttgggtctttgaaacagtt 545 | ||||||| || |||||||||||||| ||||||||||||||||||||||||| Sbjct: 50420 tctatcagttgataaaagagcccaatgcaaaaaaatgcatgttgggtctttgaaacagtt 50361 Query: 546 caaatcatttcgataataatccgtttgatctgtttta 582 | ||||||||||||||||||||||||||||||||||| Sbjct: 50360 cgaatcatttcgataataatccgtttgatctgtttta 50324
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 864 bits (436), Expect = 0.0 Identities = 540/577 (93%) Strand = Plus / Plus Query: 6 ggagcttattatgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcata 65 |||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||| Sbjct: 23208123 ggagcttattatgcaatgaacatagtggatcttcttgcaaaatcaatgtcttacttcatg 23208182 Query: 66 gattcgagagaataggagaacagtagcctgacaaacagtcggttcagtccgattcaggtg 125 |||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||| Sbjct: 23208183 gattcgagagaataggagaacagtcgcctgacaaatagttggttcagtccgattcaggta 23208242 Query: 126 ccaattcaggtgcctaatcaaatagaacccttatggatttgctagttgataaggtaaata 185 ||||| ||||||||||| ||||||||||| |||| ||||||||||||||||||||||||| Sbjct: 23208243 ccaatccaggtgcctaaacaaatagaacctttattgatttgctagttgataaggtaaata 23208302 Query: 186 tccagcccactaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgt 245 |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 23208303 tccagcccactaaatgctaggcttaatgaggataagggcctccaaaaaaattcttttcgt 23208362 Query: 246 tctatgaactttaaggtgtatgaagtctcatagttaactcttgcagtggaacgatagaga 305 |||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||| Sbjct: 23208363 tctatgaactttaaggtgtatgaagtctcatagtcaactcttgtagcggaacgatagaga 23208422 Query: 306 ctccatttcacttaggttgatttaatttagaccagaggcagacctaagtcaaggtaatcc 365 ||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 23208423 ctctatttcacttaggttgatttaatttaggccggaggcagacctaagtcaaggtaatcc 23208482 Query: 366 tcctttgaaacactttggtattgctcctagatagatcataatacaaaaaatcaatcagag 425 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 23208483 tcctttgaaacactttggtattgctcttagatagatcataatacaaataatcaatcagag 23208542 Query: 426 cacagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatctt 485 | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 23208543 cgcagggagccatctcattatctttccgtaaagaaaaactatggtgtactaactgatctt 23208602 Query: 486 taaatcagtttatgaaagagcccaatgcnnnnnnntgcatgttgggtctttgaaacagtt 545 | ||||||| || |||||||||||||| ||||||||||||||||||||||||| Sbjct: 23208603 tctatcagttgataaaagagcccaatgcaaaagaatgcatgttgggtctttgaaacagtt 23208662 Query: 546 caaatcatttcgataataatccgtttgatctgtttta 582 ||||||||||||||||||||||||||||||||||| Sbjct: 23208663 tgaatcatttcgataataatccgtttgatctgtttta 23208699 Score = 785 bits (396), Expect = 0.0 Identities = 532/578 (92%), Gaps = 5/578 (0%) Strand = Plus / Plus Query: 6 ggagcttattatgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcata 65 |||||||||||||||||||||||| | |||||| |||||||||||||||||| ||| Sbjct: 12587805 ggagcttattatgcaatgaacatagtggatcttcttgcaaaatcaatgtctt----catg 12587860 Query: 66 gattcgagagaataggagaacagtagcctgacaaacagtcggttcagtccgattcaggtg 125 |||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||| Sbjct: 12587861 gattcgagagaataggagaacagtcgcctgacaaatagttggttcagtccgattcaggta 12587920 Query: 126 ccaattcaggtgcctaatcaaatagaacccttatggatttgctagttgataaggtaaata 185 ||||| ||||||||||| ||||||||||| |||| ||||||||||||||||||||||||| Sbjct: 12587921 ccaatccaggtgcctaaacaaatagaacctttattgatttgctagttgataaggtaaata 12587980 Query: 186 tccagcccactaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgt 245 |||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||| Sbjct: 12587981 tccagcccactaaatgctaggcttaatgaggataagagcctccaaaaaaattcttttcgt 12588040 Query: 246 tctatgaactttaaggtgtatgaagtctcatagttaactcttgcagtggaacgatagaga 305 |||| |||||||||||| |||||||||||||||| |||||||| || ||||||||||||| Sbjct: 12588041 tctacgaactttaaggtatatgaagtctcatagtcaactcttgtagcggaacgatagaga 12588100 Query: 306 ctccatttcacttaggttgatttaatttagaccagaggcagacctaagtcaaggtaatcc 365 ||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||| Sbjct: 12588101 ctctatttcacttaggttgatttaatttaggctggaggcagacctaagtcaaggtaatcc 12588160 Query: 366 tcctttgaaacactttggtattgctcctagatagatcataatacaaaaaatcaatcagag 425 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 12588161 tcctttgaaacactttggtattgctcttagatagatcataatacaaataatcaatcagag 12588220 Query: 426 cacagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatctt 485 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12588221 cgcagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatctt 12588280 Query: 486 taaatcagtttatgaaagagcccaatgc-nnnnnnntgcatgttgggtctttgaaacagt 544 | ||||||| || |||||||||||||| |||||||||||||||||||||||| Sbjct: 12588281 tctatcagttgataaaagagcccaatgcaaaaaaaatgcatgttgggtctttgaaacagt 12588340 Query: 545 tcaaatcatttcgataataatccgtttgatctgtttta 582 || ||||||||||||||||||| ||||| ||||||||| Sbjct: 12588341 tcgaatcatttcgataataatctgtttggtctgtttta 12588378
>dbj|AP004236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0417D05 Length = 165752 Score = 864 bits (436), Expect = 0.0 Identities = 540/577 (93%) Strand = Plus / Plus Query: 6 ggagcttattatgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcata 65 |||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||| Sbjct: 158771 ggagcttattatgcaatgaacatagtggatcttcttgcaaaatcaatgtcttacttcatg 158830 Query: 66 gattcgagagaataggagaacagtagcctgacaaacagtcggttcagtccgattcaggtg 125 |||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||| Sbjct: 158831 gattcgagagaataggagaacagtcgcctgacaaatagttggttcagtccgattcaggta 158890 Query: 126 ccaattcaggtgcctaatcaaatagaacccttatggatttgctagttgataaggtaaata 185 ||||| ||||||||||| ||||||||||| |||| ||||||||||||||||||||||||| Sbjct: 158891 ccaatccaggtgcctaaacaaatagaacctttattgatttgctagttgataaggtaaata 158950 Query: 186 tccagcccactaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgt 245 |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 158951 tccagcccactaaatgctaggcttaatgaggataagggcctccaaaaaaattcttttcgt 159010 Query: 246 tctatgaactttaaggtgtatgaagtctcatagttaactcttgcagtggaacgatagaga 305 |||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||| Sbjct: 159011 tctatgaactttaaggtgtatgaagtctcatagtcaactcttgtagcggaacgatagaga 159070 Query: 306 ctccatttcacttaggttgatttaatttagaccagaggcagacctaagtcaaggtaatcc 365 ||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 159071 ctctatttcacttaggttgatttaatttaggccggaggcagacctaagtcaaggtaatcc 159130 Query: 366 tcctttgaaacactttggtattgctcctagatagatcataatacaaaaaatcaatcagag 425 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 159131 tcctttgaaacactttggtattgctcttagatagatcataatacaaataatcaatcagag 159190 Query: 426 cacagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatctt 485 | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 159191 cgcagggagccatctcattatctttccgtaaagaaaaactatggtgtactaactgatctt 159250 Query: 486 taaatcagtttatgaaagagcccaatgcnnnnnnntgcatgttgggtctttgaaacagtt 545 | ||||||| || |||||||||||||| ||||||||||||||||||||||||| Sbjct: 159251 tctatcagttgataaaagagcccaatgcaaaagaatgcatgttgggtctttgaaacagtt 159310 Query: 546 caaatcatttcgataataatccgtttgatctgtttta 582 ||||||||||||||||||||||||||||||||||| Sbjct: 159311 tgaatcatttcgataataatccgtttgatctgtttta 159347
>dbj|AP003623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0642B07 Length = 139297 Score = 864 bits (436), Expect = 0.0 Identities = 540/577 (93%) Strand = Plus / Plus Query: 6 ggagcttattatgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcata 65 |||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||| Sbjct: 42885 ggagcttattatgcaatgaacatagtggatcttcttgcaaaatcaatgtcttacttcatg 42944 Query: 66 gattcgagagaataggagaacagtagcctgacaaacagtcggttcagtccgattcaggtg 125 |||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||| Sbjct: 42945 gattcgagagaataggagaacagtcgcctgacaaatagttggttcagtccgattcaggta 43004 Query: 126 ccaattcaggtgcctaatcaaatagaacccttatggatttgctagttgataaggtaaata 185 ||||| ||||||||||| ||||||||||| |||| ||||||||||||||||||||||||| Sbjct: 43005 ccaatccaggtgcctaaacaaatagaacctttattgatttgctagttgataaggtaaata 43064 Query: 186 tccagcccactaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgt 245 |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 43065 tccagcccactaaatgctaggcttaatgaggataagggcctccaaaaaaattcttttcgt 43124 Query: 246 tctatgaactttaaggtgtatgaagtctcatagttaactcttgcagtggaacgatagaga 305 |||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||| Sbjct: 43125 tctatgaactttaaggtgtatgaagtctcatagtcaactcttgtagcggaacgatagaga 43184 Query: 306 ctccatttcacttaggttgatttaatttagaccagaggcagacctaagtcaaggtaatcc 365 ||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 43185 ctctatttcacttaggttgatttaatttaggccggaggcagacctaagtcaaggtaatcc 43244 Query: 366 tcctttgaaacactttggtattgctcctagatagatcataatacaaaaaatcaatcagag 425 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 43245 tcctttgaaacactttggtattgctcttagatagatcataatacaaataatcaatcagag 43304 Query: 426 cacagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatctt 485 | |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 43305 cgcagggagccatctcattatctttccgtaaagaaaaactatggtgtactaactgatctt 43364 Query: 486 taaatcagtttatgaaagagcccaatgcnnnnnnntgcatgttgggtctttgaaacagtt 545 | ||||||| || |||||||||||||| ||||||||||||||||||||||||| Sbjct: 43365 tctatcagttgataaaagagcccaatgcaaaagaatgcatgttgggtctttgaaacagtt 43424 Query: 546 caaatcatttcgataataatccgtttgatctgtttta 582 ||||||||||||||||||||||||||||||||||| Sbjct: 43425 tgaatcatttcgataataatccgtttgatctgtttta 43461
>emb|BX000560.1|CNS08CE6 Oryza sativa chromosome 12, . BAC OSJNBa0021D06 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 139684 Score = 856 bits (432), Expect = 0.0 Identities = 539/577 (93%) Strand = Plus / Plus Query: 6 ggagcttattatgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcata 65 |||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||| Sbjct: 42874 ggagcttattatgcaatgaacatagtggatcttcttgcaaaatcaatgtcttacttcatg 42933 Query: 66 gattcgagagaataggagaacagtagcctgacaaacagtcggttcagtccgattcaggtg 125 |||||||||||||||||||| ||| |||||||||| ||| ||||||||||||||||||| Sbjct: 42934 gattcgagagaataggagaaaagtcgcctgacaaatagttggttcagtccgattcaggta 42993 Query: 126 ccaattcaggtgcctaatcaaatagaacccttatggatttgctagttgataaggtaaata 185 ||||| ||||||||||| ||||||||||| |||| ||||||||||||||||||||||||| Sbjct: 42994 ccaatccaggtgcctaaacaaatagaacctttattgatttgctagttgataaggtaaata 43053 Query: 186 tccagcccactaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgt 245 |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| || Sbjct: 43054 tccagcccactaaatgctaggcttaatgaggataagggcctccaaaaaaattctttttgt 43113 Query: 246 tctatgaactttaaggtgtatgaagtctcatagttaactcttgcagtggaacgatagaga 305 |||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||| Sbjct: 43114 tctatgaactttaaggtgtatgaagtctcatagtcaactcttgtagcggaacgatagaga 43173 Query: 306 ctccatttcacttaggttgatttaatttagaccagaggcagacctaagtcaaggtaatcc 365 ||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||| Sbjct: 43174 ctctatttcacttaggttgatttaatttaggccggaggcagacctaagtcaaggtaatcc 43233 Query: 366 tcctttgaaacactttggtattgctcctagatagatcataatacaaaaaatcaatcagag 425 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 43234 tcctttgaaacactttggtattgctcttagatagatcataatacaaataatcaatcagag 43293 Query: 426 cacagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatctt 485 | ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 43294 cgcagggagtcatctcattatctttccgtaaagaaaaactatggtggactaactgatctt 43353 Query: 486 taaatcagtttatgaaagagcccaatgcnnnnnnntgcatgttgggtctttgaaacagtt 545 | ||||||| || |||||||||||||| ||||||||||||||||||||||||| Sbjct: 43354 tctatcagttgataaaagagcccaatgcaaaaaaatgcatgttgggtctttgaaacagtt 43413 Query: 546 caaatcatttcgataataatccgtttgatctgtttta 582 | ||||||||||||||||||||||||||||||||||| Sbjct: 43414 cgaatcatttcgataataatccgtttgatctgtttta 43450
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 831 bits (419), Expect = 0.0 Identities = 537/579 (92%), Gaps = 6/579 (1%) Strand = Plus / Minus Query: 10 cttattatgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcatagatt 69 |||||||||||||||||||||| || ||| ||||||||||||||||||||||||| |||| Sbjct: 115914 cttattatgcaatgaacataattgaccttgttgcaaaatcaatgtcttacttcatggatt 115855 Query: 70 cgagagaataggagaacagtagcctgacaa------acagtcggttcagtccgattcagg 123 ||| ||||||| |||||||||||||||||| |||| ||||||||||||||||||| Sbjct: 115854 cgaaagaatagaagaacagtagcctgacaatgacaaacagccggttcagtccgattcagg 115795 Query: 124 tgccaattcaggtgcctaatcaaatagaacccttatggatttgctagttgataaggtaaa 183 ||||||||||||| | || ||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 115794 tgccaattcaggtacttactcaaatagaacccctattgatttgctagttgataaggtaaa 115735 Query: 184 tatccagcccactaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttc 243 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 115734 tatccagcccactcaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttc 115675 Query: 244 gttctatgaactttaaggtgtatgaagtctcatagttaactcttgcagtggaacgataga 303 |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 115674 gttctatgaactttaaggtgtatgaagtctcatagtaaactcttgcagcggaacgataga 115615 Query: 304 gactccatttcacttaggttgatttaatttagaccagaggcagacctaagtcaaggtaat 363 |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| Sbjct: 115614 gactccatttcacttaggttgatttaatttaggccggaggcagacctaagtcaaggtaat 115555 Query: 364 cctcctttgaaacactttggtattgctcctagatagatcataatacaaaaaatcaatcag 423 ||||||||||||||||||||||||| ||||||||||||||||| ||||| ||| |||||| Sbjct: 115554 cctcctttgaaacactttggtattgttcctagatagatcataagacaaataataaatcag 115495 Query: 424 agcacagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatc 483 ||||||||||||||||| ||||||||||| |||||||||||||||| | | ||||||||| Sbjct: 115494 agcacagggagccatcttattatctttccctaaagaaaaactatggcgaattaactgatc 115435 Query: 484 tttaaatcagtttatgaaagagcccaatgcnnnnnnntgcatgttgggtctttgaaacag 543 |||| ||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 115434 tttacatcagttgatgaaagagcccaatgcagaaaaatgcatgttgggtctttgaaacag 115375 Query: 544 ttcaaatcatttcgataataatccgtttgatctgtttta 582 ||| ||||||||||||||||||||||||||||||||||| Sbjct: 115374 ttcgaatcatttcgataataatccgtttgatctgtttta 115336
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 831 bits (419), Expect = 0.0 Identities = 537/579 (92%), Gaps = 6/579 (1%) Strand = Plus / Minus Query: 10 cttattatgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcatagatt 69 |||||||||||||||||||||| || ||| ||||||||||||||||||||||||| |||| Sbjct: 54287 cttattatgcaatgaacataattgaccttgttgcaaaatcaatgtcttacttcatggatt 54228 Query: 70 cgagagaataggagaacagtagcctgacaa------acagtcggttcagtccgattcagg 123 ||| ||||||| |||||||||||||||||| |||| ||||||||||||||||||| Sbjct: 54227 cgaaagaatagaagaacagtagcctgacaatgacaaacagccggttcagtccgattcagg 54168 Query: 124 tgccaattcaggtgcctaatcaaatagaacccttatggatttgctagttgataaggtaaa 183 ||||||||||||| | || ||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 54167 tgccaattcaggtacttactcaaatagaacccctattgatttgctagttgataaggtaaa 54108 Query: 184 tatccagcccactaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttc 243 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 54107 tatccagcccactcaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttc 54048 Query: 244 gttctatgaactttaaggtgtatgaagtctcatagttaactcttgcagtggaacgataga 303 |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 54047 gttctatgaactttaaggtgtatgaagtctcatagtaaactcttgcagcggaacgataga 53988 Query: 304 gactccatttcacttaggttgatttaatttagaccagaggcagacctaagtcaaggtaat 363 |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| Sbjct: 53987 gactccatttcacttaggttgatttaatttaggccggaggcagacctaagtcaaggtaat 53928 Query: 364 cctcctttgaaacactttggtattgctcctagatagatcataatacaaaaaatcaatcag 423 ||||||||||||||||||||||||| ||||||||||||||||| ||||| ||| |||||| Sbjct: 53927 cctcctttgaaacactttggtattgttcctagatagatcataagacaaataataaatcag 53868 Query: 424 agcacagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatc 483 ||||||||||||||||| ||||||||||| |||||||||||||||| | | ||||||||| Sbjct: 53867 agcacagggagccatcttattatctttccctaaagaaaaactatggcgaattaactgatc 53808 Query: 484 tttaaatcagtttatgaaagagcccaatgcnnnnnnntgcatgttgggtctttgaaacag 543 |||| ||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 53807 tttacatcagttgatgaaagagcccaatgcagaaaaatgcatgttgggtctttgaaacag 53748 Query: 544 ttcaaatcatttcgataataatccgtttgatctgtttta 582 ||| ||||||||||||||||||||||||||||||||||| Sbjct: 53747 ttcgaatcatttcgataataatccgtttgatctgtttta 53709
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 829 bits (418), Expect = 0.0 Identities = 538/578 (93%), Gaps = 3/578 (0%) Strand = Plus / Minus Query: 6 ggagcttattatgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcata 65 |||||||||||||||||||||||| | |||||| |||||||||||| |||||||||||| Sbjct: 50978 ggagcttattatgcaatgaacatagtggatcttcttgcaaaatcaacgtcttacttcatg 50919 Query: 66 gattcgagagaataggagaacagtagcctgacaaacagtcggttcagtccgattcaggtg 125 |||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||| Sbjct: 50918 gattcgagagaataggagaacagtcgcctgacaaatagttggttcagtccgattcaggta 50859 Query: 126 ccaattcaggtgcctaatcaaatagaacccttatggatttgctagttgataaggtaaata 185 ||||| ||||||||||| ||||||||||| |||| ||||||||||||||||||||||||| Sbjct: 50858 ccaatccaggtgcctaaacaaatagaacctttattgatttgctagttgataaggtaaata 50799 Query: 186 tccagcccactaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgt 245 |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 50798 tccagcccactaaatgctaggcttaatgaggataagggcctccaaaaaaattcttttcgt 50739 Query: 246 tctatgaactttaaggtgtatgaagtctcatagttaactcttgcagtggaacgatagaga 305 |||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||| Sbjct: 50738 tctatgaactttaaggtgtatgaagtctcatagtcaactcttgtagcggaacgatagaga 50679 Query: 306 ctccatttcacttaggttgatttaatttagaccagaggcagacctaagtcaaggtaatcc 365 ||| |||||||||||||||||||||||||| || | | ||||||||||||||||||||| Sbjct: 50678 ctctatttcacttaggttgatttaatttaggccggcg--agacctaagtcaaggtaatcc 50621 Query: 366 tcctttgaaacactttggtattgctcctagatagatcataatacaaaaaatcaatcagag 425 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 50620 tcctttgaaacactttggtattgctcttagatagatcataatacaaataatcaatcagag 50561 Query: 426 cacagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatctt 485 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 50560 cgcagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatctt 50501 Query: 486 taaatcagtttatgaaagagcccaatgc-nnnnnnntgcatgttgggtctttgaaacagt 544 | ||||||| || |||||||||||||| |||||||||||||||||||||||| Sbjct: 50500 tctatcagttgataaaagagcccaatgcaaaaaaaatgcatgttgggtctttgaaacagt 50441 Query: 545 tcaaatcatttcgataataatccgtttgatctgtttta 582 || ||||||||||||||||||||||||||||||||||| Sbjct: 50440 tcgaatcatttcgataataatccgtttgatctgtttta 50403
>gb|AY705912.1| Zea mays cytotype NA hypothetical protein genes, complete cds; tRNA-Met (trnM-ct) gene, atpE-ct and atpB-ct pseudogenes, complete sequence; hypothetical protein genes, complete cds; NADH dehydrogenase subunit I (nad1) gene, partial cds; ribosomal protein S13 (rps13) gene, complete cds; and tRNA-Met (trnfM) gene, complete sequence; mitochondrial Length = 40000 Score = 815 bits (411), Expect = 0.0 Identities = 535/579 (92%), Gaps = 6/579 (1%) Strand = Plus / Minus Query: 10 cttattatgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcatagatt 69 |||||||||||||||||||||| || ||| ||||||||||||||||||||||||| |||| Sbjct: 22663 cttattatgcaatgaacataattgaccttgttgcaaaatcaatgtcttacttcatggatt 22604 Query: 70 cgagagaataggagaacagtagcctgacaa------acagtcggttcagtccgattcagg 123 ||| ||||||| |||||||||||||||||| |||| |||||||||||||||||| Sbjct: 22603 cgaaagaatagaagaacagtagcctgacaatgacaaacagctggttcagtccgattcagg 22544 Query: 124 tgccaattcaggtgcctaatcaaatagaacccttatggatttgctagttgataaggtaaa 183 |||||||| |||||| || ||||||||||| | ||| ||||||||||||||||||||||| Sbjct: 22543 tgccaattaaggtgcttactcaaatagaactcctattgatttgctagttgataaggtaaa 22484 Query: 184 tatccagcccactaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttc 243 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22483 tatccagcccactcaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttc 22424 Query: 244 gttctatgaactttaaggtgtatgaagtctcatagttaactcttgcagtggaacgataga 303 |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 22423 gttctatgaactttaaggtgtatgaagtctcatagtaaactcttgcagcggaacgataga 22364 Query: 304 gactccatttcacttaggttgatttaatttagaccagaggcagacctaagtcaaggtaat 363 |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| Sbjct: 22363 gactccatttcacttaggttgatttaatttaggccggaggcagacctaagtcaaggtaat 22304 Query: 364 cctcctttgaaacactttggtattgctcctagatagatcataatacaaaaaatcaatcag 423 ||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||| Sbjct: 22303 cctcctttgaaacactttggtattgttcctagatagatcataagacaaataatcaatcag 22244 Query: 424 agcacagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatc 483 ||||||||||||||||| ||||||||||| |||||||||||||||| | | ||||||||| Sbjct: 22243 agcacagggagccatcttattatctttccctaaagaaaaactatggcgaattaactgatc 22184 Query: 484 tttaaatcagtttatgaaagagcccaatgcnnnnnnntgcatgttgggtctttgaaacag 543 |||| || |||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 22183 tttacattagttgatgaaagagcccaatgcagaaaaatgcatgttgggtctttgaaacag 22124 Query: 544 ttcaaatcatttcgataataatccgtttgatctgtttta 582 ||| ||||||||||||||||||||||||||||||||||| Sbjct: 22123 ttcgaatcatttcgataataatccgtttgatctgtttta 22085
>gb|DQ490952.1| Zea mays subsp. mays genotype male-fertile NA mitochondrion, complete genome Length = 701046 Score = 815 bits (411), Expect = 0.0 Identities = 535/579 (92%), Gaps = 6/579 (1%) Strand = Plus / Minus Query: 10 cttattatgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcatagatt 69 |||||||||||||||||||||| || ||| ||||||||||||||||||||||||| |||| Sbjct: 22663 cttattatgcaatgaacataattgaccttgttgcaaaatcaatgtcttacttcatggatt 22604 Query: 70 cgagagaataggagaacagtagcctgacaa------acagtcggttcagtccgattcagg 123 ||| ||||||| |||||||||||||||||| |||| |||||||||||||||||| Sbjct: 22603 cgaaagaatagaagaacagtagcctgacaatgacaaacagctggttcagtccgattcagg 22544 Query: 124 tgccaattcaggtgcctaatcaaatagaacccttatggatttgctagttgataaggtaaa 183 |||||||| |||||| || ||||||||||| | ||| ||||||||||||||||||||||| Sbjct: 22543 tgccaattaaggtgcttactcaaatagaactcctattgatttgctagttgataaggtaaa 22484 Query: 184 tatccagcccactaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttc 243 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22483 tatccagcccactcaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttc 22424 Query: 244 gttctatgaactttaaggtgtatgaagtctcatagttaactcttgcagtggaacgataga 303 |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 22423 gttctatgaactttaaggtgtatgaagtctcatagtaaactcttgcagcggaacgataga 22364 Query: 304 gactccatttcacttaggttgatttaatttagaccagaggcagacctaagtcaaggtaat 363 |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| Sbjct: 22363 gactccatttcacttaggttgatttaatttaggccggaggcagacctaagtcaaggtaat 22304 Query: 364 cctcctttgaaacactttggtattgctcctagatagatcataatacaaaaaatcaatcag 423 ||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||| Sbjct: 22303 cctcctttgaaacactttggtattgttcctagatagatcataagacaaataatcaatcag 22244 Query: 424 agcacagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatc 483 ||||||||||||||||| ||||||||||| |||||||||||||||| | | ||||||||| Sbjct: 22243 agcacagggagccatcttattatctttccctaaagaaaaactatggcgaattaactgatc 22184 Query: 484 tttaaatcagtttatgaaagagcccaatgcnnnnnnntgcatgttgggtctttgaaacag 543 |||| || |||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 22183 tttacattagttgatgaaagagcccaatgcagaaaaatgcatgttgggtctttgaaacag 22124 Query: 544 ttcaaatcatttcgataataatccgtttgatctgtttta 582 ||| ||||||||||||||||||||||||||||||||||| Sbjct: 22123 ttcgaatcatttcgataataatccgtttgatctgtttta 22085
>gb|DQ490951.1| Zea mays subsp. mays genotype CMS-S mitochondrion, complete genome Length = 569553 Score = 815 bits (411), Expect = 0.0 Identities = 535/579 (92%), Gaps = 6/579 (1%) Strand = Plus / Minus Query: 10 cttattatgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcatagatt 69 |||||||||||||||||||||| || ||| ||||||||||||||||||||||||| |||| Sbjct: 59826 cttattatgcaatgaacataattgaccttgttgcaaaatcaatgtcttacttcatggatt 59767 Query: 70 cgagagaataggagaacagtagcctgacaa------acagtcggttcagtccgattcagg 123 ||| ||||||| |||||||||||||||||| |||| |||||||||||||||||| Sbjct: 59766 cgaaagaatagaagaacagtagcctgacaatgacaaacagctggttcagtccgattcagg 59707 Query: 124 tgccaattcaggtgcctaatcaaatagaacccttatggatttgctagttgataaggtaaa 183 |||||||| |||||| || ||||||||||| | ||| ||||||||||||||||||||||| Sbjct: 59706 tgccaattaaggtgcttactcaaatagaactcctattgatttgctagttgataaggtaaa 59647 Query: 184 tatccagcccactaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttc 243 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 59646 tatccagcccactcaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttc 59587 Query: 244 gttctatgaactttaaggtgtatgaagtctcatagttaactcttgcagtggaacgataga 303 |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 59586 gttctatgaactttaaggtgtatgaagtctcatagtaaactcttgcagcggaacgataga 59527 Query: 304 gactccatttcacttaggttgatttaatttagaccagaggcagacctaagtcaaggtaat 363 |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| Sbjct: 59526 gactccatttcacttaggttgatttaatttaggccggaggcagacctaagtcaaggtaat 59467 Query: 364 cctcctttgaaacactttggtattgctcctagatagatcataatacaaaaaatcaatcag 423 ||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||| Sbjct: 59466 cctcctttgaaacactttggtattgttcctagatagatcataagacaaataatcaatcag 59407 Query: 424 agcacagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatc 483 ||||||||||||||||| ||||||||||| |||||||||||||||| | | ||||||||| Sbjct: 59406 agcacagggagccatcttattatctttccctaaagaaaaactatggcgaattaactgatc 59347 Query: 484 tttaaatcagtttatgaaagagcccaatgcnnnnnnntgcatgttgggtctttgaaacag 543 |||| || |||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 59346 tttacattagttgatgaaagagcccaatgcagaaaaatgcatgttgggtctttgaaacag 59287 Query: 544 ttcaaatcatttcgataataatccgtttgatctgtttta 582 ||| ||||||||||||||||||||||||||||||||||| Sbjct: 59286 ttcgaatcatttcgataataatccgtttgatctgtttta 59248
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 815 bits (411), Expect = 0.0 Identities = 535/579 (92%), Gaps = 6/579 (1%) Strand = Plus / Minus Query: 10 cttattatgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcatagatt 69 |||||||||||||||||||||| || ||| ||||||||||||||||||||||||| |||| Sbjct: 194849 cttattatgcaatgaacataattgaccttgttgcaaaatcaatgtcttacttcatggatt 194790 Query: 70 cgagagaataggagaacagtagcctgacaa------acagtcggttcagtccgattcagg 123 ||| ||||||| |||||||||||||||||| |||| |||||||||||||||||| Sbjct: 194789 cgaaagaatagaagaacagtagcctgacaatgacaaacagctggttcagtccgattcagg 194730 Query: 124 tgccaattcaggtgcctaatcaaatagaacccttatggatttgctagttgataaggtaaa 183 |||||||| |||||| || ||||||||||| | ||| ||||||||||||||||||||||| Sbjct: 194729 tgccaattaaggtgcttactcaaatagaactcctattgatttgctagttgataaggtaaa 194670 Query: 184 tatccagcccactaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttc 243 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 194669 tatccagcccactcaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttc 194610 Query: 244 gttctatgaactttaaggtgtatgaagtctcatagttaactcttgcagtggaacgataga 303 |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 194609 gttctatgaactttaaggtgtatgaagtctcatagtaaactcttgcagcggaacgataga 194550 Query: 304 gactccatttcacttaggttgatttaatttagaccagaggcagacctaagtcaaggtaat 363 |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| Sbjct: 194549 gactccatttcacttaggttgatttaatttaggccggaggcagacctaagtcaaggtaat 194490 Query: 364 cctcctttgaaacactttggtattgctcctagatagatcataatacaaaaaatcaatcag 423 ||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||| Sbjct: 194489 cctcctttgaaacactttggtattgttcctagatagatcataagacaaataatcaatcag 194430 Query: 424 agcacagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatc 483 ||||||||||||||||| ||||||||||| |||||||||||||||| | | ||||||||| Sbjct: 194429 agcacagggagccatcttattatctttccctaaagaaaaactatggcgaattaactgatc 194370 Query: 484 tttaaatcagtttatgaaagagcccaatgcnnnnnnntgcatgttgggtctttgaaacag 543 |||| || |||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 194369 tttacattagttgatgaaagagcccaatgcagaaaaatgcatgttgggtctttgaaacag 194310 Query: 544 ttcaaatcatttcgataataatccgtttgatctgtttta 582 ||| ||||||||||||||||||||||||||||||||||| Sbjct: 194309 ttcgaatcatttcgataataatccgtttgatctgtttta 194271
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 799 bits (403), Expect = 0.0 Identities = 530/575 (92%), Gaps = 6/575 (1%) Strand = Plus / Minus Query: 14 ttatgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcatagattcgag 73 |||||||||||||||||| || ||| ||||||||||||||||||||||||| ||||||| Sbjct: 53757 ttatgcaatgaacataattgaccttgttgcaaaatcaatgtcttacttcatggattcgaa 53698 Query: 74 agaataggagaacagtagcctgacaa------acagtcggttcagtccgattcaggtgcc 127 ||||||| |||||||||||||||||| |||| |||||||||||||||||||||| Sbjct: 53697 agaatagaagaacagtagcctgacaatgacaaacagctggttcagtccgattcaggtgcc 53638 Query: 128 aattcaggtgcctaatcaaatagaacccttatggatttgctagttgataaggtaaatatc 187 |||| |||||| || ||||||||||| | ||| ||||||||||||||||||||||||||| Sbjct: 53637 aattaaggtgcttactcaaatagaactcctattgatttgctagttgataaggtaaatatc 53578 Query: 188 cagcccactaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttc 247 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53577 cagcccactcaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttc 53518 Query: 248 tatgaactttaaggtgtatgaagtctcatagttaactcttgcagtggaacgatagagact 307 |||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct: 53517 tatgaactttaaggtgtatgaagtctcatagtaaactcttgcagcggaacgatagagact 53458 Query: 308 ccatttcacttaggttgatttaatttagaccagaggcagacctaagtcaaggtaatcctc 367 |||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| Sbjct: 53457 ccatttcacttaggttgatttaatttaggccggaggcagacctaagtcaaggtaatcctc 53398 Query: 368 ctttgaaacactttggtattgctcctagatagatcataatacaaaaaatcaatcagagca 427 ||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||| Sbjct: 53397 ctttgaaacactttggtattgttcctagatagatcataagacaaataatcaatcagagca 53338 Query: 428 cagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatcttta 487 ||||||||||||| ||||||||||| |||||||||||||||| | | ||||||||||||| Sbjct: 53337 cagggagccatcttattatctttccctaaagaaaaactatggcgaattaactgatcttta 53278 Query: 488 aatcagtttatgaaagagcccaatgcnnnnnnntgcatgttgggtctttgaaacagttca 547 || |||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 53277 cattagttgatgaaagagcccaatgcagaaaaatgcatgttgggtctttgaaacagttcg 53218 Query: 548 aatcatttcgataataatccgtttgatctgtttta 582 ||||||||||||||||||| ||||||||||||||| Sbjct: 53217 aatcatttcgataataatctgtttgatctgtttta 53183
>gb|M81923.1|CEHCPMVTGA Cenchrus setigerus chloroplast Met-tRNA gene, and Val-tRNA gene Length = 1189 Score = 795 bits (401), Expect = 0.0 Identities = 481/505 (95%), Gaps = 2/505 (0%) Strand = Plus / Plus Query: 10 cttattatgcaatgaacataatcgatctta-ttgcaaaatcaatgtcttacttcatagat 68 |||||||||||||||||||||| || |||| ||||||||||||||||||||||||| ||| Sbjct: 453 cttattatgcaatgaacataat-gaacttaattgcaaaatcaatgtcttacttcatggat 511 Query: 69 tcgagagaataggagaacagtagcctgacaaacagtcggttcagtccgattcaggtgcca 128 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 512 tcgaaagaataggagaacagtagcctgacaaacagtcggttcagtccgattcaggtgcca 571 Query: 129 attcaggtgcctaatcaaatagaacccttatggatttgctagttgataaggtaaatatcc 188 |||||||| | |||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 572 attcaggtacttaatcaaatagaacccctattgatttgctagttgataaggtaaatatcc 631 Query: 189 agcccactaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttct 248 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 632 agcccactcaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttct 691 Query: 249 atgaactttaaggtgtatgaagtctcatagttaactcttgcagtggaacgatagagactc 308 ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| Sbjct: 692 atgaactttaaggtgtatgaagtctcatagtaaactcttgcagcggaacgatagagactc 751 Query: 309 catttcacttaggttgatttaatttagaccagaggcagacctaagtcaaggtaatcctcc 368 ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 752 catttcacttaggttgatttaatttaggccggaggcagacctaagtcaaggtaatcctcc 811 Query: 369 tttgaaacactttggtattgctcctagatagatcataatacaaaaaatcaatcagagcac 428 |||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||| Sbjct: 812 tttgaaacactttggtattgctcctagatagatcataagaaaaataatcaatcagagcac 871 Query: 429 agggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatctttaa 488 |||||||||||| ||||||||||| |||||||||||||||| || ||||||||||||| Sbjct: 872 agggagccatcttattatctttccctaaagaaaaactatggcagattaactgatctttac 931 Query: 489 atcagtttatgaaagagcccaatgc 513 ||||||| ||||||||||||||||| Sbjct: 932 atcagttgatgaaagagcccaatgc 956 Score = 99.6 bits (50), Expect = 1e-17 Identities = 59/62 (95%) Strand = Plus / Plus Query: 521 tgcatgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgttt 580 |||||||||||||||||||||||||| |||||||||||||| |||| ||||||||||||| Sbjct: 970 tgcatgttgggtctttgaaacagttcgaatcatttcgataacaatctgtttgatctgttt 1029 Query: 581 ta 582 || Sbjct: 1030 ta 1031
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 791 bits (399), Expect = 0.0 Identities = 533/579 (92%), Gaps = 7/579 (1%) Strand = Plus / Minus Query: 10 cttattatgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcatagatt 69 |||||||||||||||||||||| || ||| ||||||||||||||||||||||||| |||| Sbjct: 53771 cttattatgcaatgaacataattgaccttgttgcaaaatcaatgtcttacttcatggatt 53712 Query: 70 cgagagaataggagaacagtagcctgacaa------acagtcggttcagtccgattcagg 123 ||| ||||||| |||||||||||||||||| |||| |||||||||||||||||| Sbjct: 53711 cgaaagaatagaagaacagtagcctgacaatgacaaacagctggttcagtccgattcagg 53652 Query: 124 tgccaattcaggtgcctaatcaaatagaacccttatggatttgctagttgataaggtaaa 183 |||||||| |||||| || ||||||||||| | ||| ||||||||||||||||||||||| Sbjct: 53651 tgccaattaaggtgcttactcaaatagaactcctattgatttgctagttgataaggtaaa 53592 Query: 184 tatccagcccactaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttc 243 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 53591 tatccagcccactcaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttc 53532 Query: 244 gttctatgaactttaaggtgtatgaagtctcatagttaactcttgcagtggaacgataga 303 |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 53531 gttctatgaactttaaggtgtatgaagtctcatagtaaactcttgcagcggaacgataga 53472 Query: 304 gactccatttcacttaggttgatttaatttagaccagaggcagacctaagtcaaggtaat 363 |||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||| Sbjct: 53471 gactccatttcacttaggttgatttaatttaggccggaggc-gacctaagtcaaggtaat 53413 Query: 364 cctcctttgaaacactttggtattgctcctagatagatcataatacaaaaaatcaatcag 423 ||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||| Sbjct: 53412 cctcctttgaaacactttggtattgttcctagatagatcataagacaaataatcaatcag 53353 Query: 424 agcacagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatc 483 ||||||||||||||||| ||||||||||| |||||||||||||||| | | ||||||||| Sbjct: 53352 agcacagggagccatcttattatctttccctaaagaaaaactatggcgaattaactgatc 53293 Query: 484 tttaaatcagtttatgaaagagcccaatgcnnnnnnntgcatgttgggtctttgaaacag 543 |||| || |||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 53292 tttacattagttgatgaaagagcccaatgcagaaaaatgcatgttgggtctttgaaacag 53233 Query: 544 ttcaaatcatttcgataataatccgtttgatctgtttta 582 ||| ||||||||||||||||||| ||||||||||||||| Sbjct: 53232 ttcgaatcatttcgataataatctgtttgatctgtttta 53194
>emb|X04183.1|CHZMTRNV Zea mays chloroplast tV-UAC gene for transfer RNA-Val (UAC) Length = 1047 Score = 791 bits (399), Expect = 0.0 Identities = 533/579 (92%), Gaps = 7/579 (1%) Strand = Plus / Plus Query: 10 cttattatgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcatagatt 69 |||||||||||||||||||||| || ||| ||||||||||||||||||||||||| |||| Sbjct: 154 cttattatgcaatgaacataattgaccttgttgcaaaatcaatgtcttacttcatggatt 213 Query: 70 cgagagaataggagaacagtagcctgacaa------acagtcggttcagtccgattcagg 123 ||| ||||||| |||||||||||||||||| |||| |||||||||||||||||| Sbjct: 214 cgaaagaatagaagaacagtagcctgacaatgacaaacagctggttcagtccgattcagg 273 Query: 124 tgccaattcaggtgcctaatcaaatagaacccttatggatttgctagttgataaggtaaa 183 |||||||| |||||| || ||||||||||| | ||| ||||||||||||||||||||||| Sbjct: 274 tgccaattaaggtgcttactcaaatagaactcctattgatttgctagttgataaggtaaa 333 Query: 184 tatccagcccactaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttc 243 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 334 tatccagcccactcaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttc 393 Query: 244 gttctatgaactttaaggtgtatgaagtctcatagttaactcttgcagtggaacgataga 303 |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct: 394 gttctatgaactttaaggtgtatgaagtctcatagtaaactcttgcagcggaacgataga 453 Query: 304 gactccatttcacttaggttgatttaatttagaccagaggcagacctaagtcaaggtaat 363 |||||||||||||||||||||||||||||||| || ||||| |||||||||||||||||| Sbjct: 454 gactccatttcacttaggttgatttaatttaggccggaggc-gacctaagtcaaggtaat 512 Query: 364 cctcctttgaaacactttggtattgctcctagatagatcataatacaaaaaatcaatcag 423 ||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||| Sbjct: 513 cctcctttgaaacactttggtattgttcctagatagatcataagacaaataatcaatcag 572 Query: 424 agcacagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatc 483 ||||||||||||||||| ||||||||||| |||||||||||||||| | | ||||||||| Sbjct: 573 agcacagggagccatcttattatctttccctaaagaaaaactatggcgaattaactgatc 632 Query: 484 tttaaatcagtttatgaaagagcccaatgcnnnnnnntgcatgttgggtctttgaaacag 543 |||| || |||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 633 tttacattagttgatgaaagagcccaatgcagaaaaatgcatgttgggtctttgaaacag 692 Query: 544 ttcaaatcatttcgataataatccgtttgatctgtttta 582 ||| ||||||||||||||||||| ||||||||||||||| Sbjct: 693 ttcgaatcatttcgataataatctgtttgatctgtttta 731
>dbj|AP004757.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0652D10 Length = 156744 Score = 785 bits (396), Expect = 0.0 Identities = 532/578 (92%), Gaps = 5/578 (0%) Strand = Plus / Plus Query: 6 ggagcttattatgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcata 65 |||||||||||||||||||||||| | |||||| |||||||||||||||||| ||| Sbjct: 70118 ggagcttattatgcaatgaacatagtggatcttcttgcaaaatcaatgtctt----catg 70173 Query: 66 gattcgagagaataggagaacagtagcctgacaaacagtcggttcagtccgattcaggtg 125 |||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||| Sbjct: 70174 gattcgagagaataggagaacagtcgcctgacaaatagttggttcagtccgattcaggta 70233 Query: 126 ccaattcaggtgcctaatcaaatagaacccttatggatttgctagttgataaggtaaata 185 ||||| ||||||||||| ||||||||||| |||| ||||||||||||||||||||||||| Sbjct: 70234 ccaatccaggtgcctaaacaaatagaacctttattgatttgctagttgataaggtaaata 70293 Query: 186 tccagcccactaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgt 245 |||||||||||||||||||||| ||||||||||||| |||||||||||| |||||||||| Sbjct: 70294 tccagcccactaaatgctaggcttaatgaggataagagcctccaaaaaaattcttttcgt 70353 Query: 246 tctatgaactttaaggtgtatgaagtctcatagttaactcttgcagtggaacgatagaga 305 |||| |||||||||||| |||||||||||||||| |||||||| || ||||||||||||| Sbjct: 70354 tctacgaactttaaggtatatgaagtctcatagtcaactcttgtagcggaacgatagaga 70413 Query: 306 ctccatttcacttaggttgatttaatttagaccagaggcagacctaagtcaaggtaatcc 365 ||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||| Sbjct: 70414 ctctatttcacttaggttgatttaatttaggctggaggcagacctaagtcaaggtaatcc 70473 Query: 366 tcctttgaaacactttggtattgctcctagatagatcataatacaaaaaatcaatcagag 425 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct: 70474 tcctttgaaacactttggtattgctcttagatagatcataatacaaataatcaatcagag 70533 Query: 426 cacagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatctt 485 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70534 cgcagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatctt 70593 Query: 486 taaatcagtttatgaaagagcccaatgc-nnnnnnntgcatgttgggtctttgaaacagt 544 | ||||||| || |||||||||||||| |||||||||||||||||||||||| Sbjct: 70594 tctatcagttgataaaagagcccaatgcaaaaaaaatgcatgttgggtctttgaaacagt 70653 Query: 545 tcaaatcatttcgataataatccgtttgatctgtttta 582 || ||||||||||||||||||| ||||| ||||||||| Sbjct: 70654 tcgaatcatttcgataataatctgtttggtctgtttta 70691
>gb|M81925.1|PENCPVTGB Pennisetum glaucum chloroplast Val-tRNA gene Length = 880 Score = 749 bits (378), Expect = 0.0 Identities = 455/481 (94%), Gaps = 6/481 (1%) Strand = Plus / Plus Query: 39 attgcaaaatcaatgtcttacttcatagattcgagagaataggagaacagtagcctgaca 98 |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| Sbjct: 187 attgcaaaatcaatgtcttacttcatggattcgaaagaataggagaacagtagcctgaca 246 Query: 99 aacagtcggttcagtccgattcaggtgccaattcaggtgcctaatcaaa------tagaa 152 |||||||||||||||||||||||||||||||||||||| | |||||||| ||||| Sbjct: 247 aacagtcggttcagtccgattcaggtgccaattcaggtacttaatcaaaatcaaatagaa 306 Query: 153 cccttatggatttgctagttgataaggtaaatatccagcccactaaatgctaggcgtaat 212 ||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 307 cccctattgatttgctagttgataaggtaaatatccagcccactcaatgctaggcgtaat 366 Query: 213 gaggataagggcctccaaaaaacttcttttcgttctatgaactttaaggtgtatgaagtc 272 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367 gaggataagggcctccaaaaaacttcttttcgttctatgaactttaaggtgtatgaagtc 426 Query: 273 tcatagttaactcttgcagtggaacgatagagactccatttcacttaggttgatttaatt 332 ||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 427 tcatagtaaactcttgcagcggaacgatagagactccatttcacttaggttgatttaatt 486 Query: 333 tagaccagaggcagacctaagtcaaggtaatcctcctttgaaacactttggtattgctcc 392 ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 487 taggcccgaggcagacctaagtcaaggtaatcctcctttgaaacactttggtattgctcc 546 Query: 393 tagatagatcataatacaaaaaatcaatcagagcacagggagccatctcattatctttcc 452 |||||||||||||| | ||| ||||||||||||||||||||||||||| ||||||||||| Sbjct: 547 tagatagatcataagaaaaataatcaatcagagcacagggagccatcttattatctttcc 606 Query: 453 gtaaagaaaaactatggtggactaactgatctttaaatcagtttatgaaagagcccaatg 512 |||||||||||||||| ||| ||||||||||||| ||||||| |||||||||||||||| Sbjct: 607 ctaaagaaaaactatggcggattaactgatctttacatcagttgatgaaagagcccaatg 666 Query: 513 c 513 | Sbjct: 667 c 667 Score = 99.6 bits (50), Expect = 1e-17 Identities = 59/62 (95%) Strand = Plus / Plus Query: 521 tgcatgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgttt 580 |||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||| Sbjct: 681 tgcatgttgggtctttgaaacagttcgaatcatttcgataacaattcgtttgatctgttt 740 Query: 581 ta 582 || Sbjct: 741 ta 742
>gb|DQ167399.1| Oryza sativa (indica cultivar-group) isolate 93-11 mitochondrion, complete genome Length = 491515 Score = 369 bits (186), Expect = 7e-99 Identities = 245/265 (92%), Gaps = 6/265 (2%) Strand = Plus / Minus Query: 129 attcaggtgcctaatcaaatagaacccttatggatttgctagttgataaggtaaatatcc 188 ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct: 121399 attcaggtgcctaatcaaatagaacccttattgatttgctagtttcaaaggtaaatatcc 121340 Query: 189 agcccactaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttct 248 ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 121339 agcccactaaatgctaggcgtaatgagga------cctccaaaaaaattcttttcgttct 121286 Query: 249 atgaactttaaggtgtatgaagtctcatagttaactcttgcagtggaacgatagagactc 308 ||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||| Sbjct: 121285 atgaactttaaggtgtatgaagtctcatattccactcttgcagcagaacgatagagactc 121226 Query: 309 catttcacttaggttgatttaatttagaccagaggcagacctaagtcaaggtaatcctcc 368 ||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||| | Sbjct: 121225 catttaacttaggttgatttaatttaggccggaggcagacctaagtcaaggtaatccttc 121166 Query: 369 tttgaaacactttggtattgctcct 393 ||||||||||||||||||||||||| Sbjct: 121165 tttgaaacactttggtattgctcct 121141 Score = 369 bits (186), Expect = 7e-99 Identities = 245/265 (92%), Gaps = 6/265 (2%) Strand = Plus / Minus Query: 129 attcaggtgcctaatcaaatagaacccttatggatttgctagttgataaggtaaatatcc 188 ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct: 26339 attcaggtgcctaatcaaatagaacccttattgatttgctagtttcaaaggtaaatatcc 26280 Query: 189 agcccactaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttct 248 ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 26279 agcccactaaatgctaggcgtaatgagga------cctccaaaaaaattcttttcgttct 26226 Query: 249 atgaactttaaggtgtatgaagtctcatagttaactcttgcagtggaacgatagagactc 308 ||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||| Sbjct: 26225 atgaactttaaggtgtatgaagtctcatattccactcttgcagcagaacgatagagactc 26166 Query: 309 catttcacttaggttgatttaatttagaccagaggcagacctaagtcaaggtaatcctcc 368 ||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||| | Sbjct: 26165 catttaacttaggttgatttaatttaggccggaggcagacctaagtcaaggtaatccttc 26106 Query: 369 tttgaaacactttggtattgctcct 393 ||||||||||||||||||||||||| Sbjct: 26105 tttgaaacactttggtattgctcct 26081 Score = 194 bits (98), Expect = 2e-46 Identities = 116/122 (95%) Strand = Plus / Minus Query: 6 ggagcttattatgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcata 65 |||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||| Sbjct: 121510 ggagcttattatgcaatgaacatagtggatcttcttgcaaaatcaatgtcttacttcatg 121451 Query: 66 gattcgagagaataggagaacagtagcctgacaaacagtcggttcagtccgattcaggtg 125 ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 121450 gattcgagagaataggagaacagtagcctgacaaatagttggttcagtccgattcaggtg 121391 Query: 126 cc 127 || Sbjct: 121390 cc 121389 Score = 194 bits (98), Expect = 2e-46 Identities = 116/122 (95%) Strand = Plus / Minus Query: 6 ggagcttattatgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcata 65 |||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||| Sbjct: 26450 ggagcttattatgcaatgaacatagtggatcttcttgcaaaatcaatgtcttacttcatg 26391 Query: 66 gattcgagagaataggagaacagtagcctgacaaacagtcggttcagtccgattcaggtg 125 ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 26390 gattcgagagaataggagaacagtagcctgacaaatagttggttcagtccgattcaggtg 26331 Query: 126 cc 127 || Sbjct: 26330 cc 26329 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 40 ttgcaaaatcaatgtcttact 60 ||||||||||||||||||||| Sbjct: 230816 ttgcaaaatcaatgtcttact 230836
>gb|DQ167807.1| Oryza sativa (japonica cultivar-group) isolate PA64S mitochondrion, complete genome Length = 490673 Score = 369 bits (186), Expect = 7e-99 Identities = 245/265 (92%), Gaps = 6/265 (2%) Strand = Plus / Minus Query: 129 attcaggtgcctaatcaaatagaacccttatggatttgctagttgataaggtaaatatcc 188 ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct: 120426 attcaggtgcctaatcaaatagaacccttattgatttgctagtttcaaaggtaaatatcc 120367 Query: 189 agcccactaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttct 248 ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 120366 agcccactaaatgctaggcgtaatgagga------cctccaaaaaaattcttttcgttct 120313 Query: 249 atgaactttaaggtgtatgaagtctcatagttaactcttgcagtggaacgatagagactc 308 ||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||| Sbjct: 120312 atgaactttaaggtgtatgaagtctcatattccactcttgcagcagaacgatagagactc 120253 Query: 309 catttcacttaggttgatttaatttagaccagaggcagacctaagtcaaggtaatcctcc 368 ||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||| | Sbjct: 120252 catttaacttaggttgatttaatttaggccggaggcagacctaagtcaaggtaatccttc 120193 Query: 369 tttgaaacactttggtattgctcct 393 ||||||||||||||||||||||||| Sbjct: 120192 tttgaaacactttggtattgctcct 120168 Score = 369 bits (186), Expect = 7e-99 Identities = 245/265 (92%), Gaps = 6/265 (2%) Strand = Plus / Minus Query: 129 attcaggtgcctaatcaaatagaacccttatggatttgctagttgataaggtaaatatcc 188 ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct: 25845 attcaggtgcctaatcaaatagaacccttattgatttgctagtttcaaaggtaaatatcc 25786 Query: 189 agcccactaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttct 248 ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 25785 agcccactaaatgctaggcgtaatgagga------cctccaaaaaaattcttttcgttct 25732 Query: 249 atgaactttaaggtgtatgaagtctcatagttaactcttgcagtggaacgatagagactc 308 ||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||| Sbjct: 25731 atgaactttaaggtgtatgaagtctcatattccactcttgcagcagaacgatagagactc 25672 Query: 309 catttcacttaggttgatttaatttagaccagaggcagacctaagtcaaggtaatcctcc 368 ||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||| | Sbjct: 25671 catttaacttaggttgatttaatttaggccggaggcagacctaagtcaaggtaatccttc 25612 Query: 369 tttgaaacactttggtattgctcct 393 ||||||||||||||||||||||||| Sbjct: 25611 tttgaaacactttggtattgctcct 25587 Score = 202 bits (102), Expect = 9e-49 Identities = 117/122 (95%) Strand = Plus / Minus Query: 6 ggagcttattatgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcata 65 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 120537 ggagcttattatgcaatgaacataatggatcttattgcaaaatcaatgtcttacttcatg 120478 Query: 66 gattcgagagaataggagaacagtagcctgacaaacagtcggttcagtccgattcaggtg 125 |||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 120477 gatttgagagaataggagaacagtagcctgacaaatagttggttcagtccgattcaggtg 120418 Query: 126 cc 127 || Sbjct: 120417 cc 120416 Score = 202 bits (102), Expect = 9e-49 Identities = 117/122 (95%) Strand = Plus / Minus Query: 6 ggagcttattatgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcata 65 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 25956 ggagcttattatgcaatgaacataatggatcttattgcaaaatcaatgtcttacttcatg 25897 Query: 66 gattcgagagaataggagaacagtagcctgacaaacagtcggttcagtccgattcaggtg 125 |||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 25896 gatttgagagaataggagaacagtagcctgacaaatagttggttcagtccgattcaggtg 25837 Query: 126 cc 127 || Sbjct: 25836 cc 25835 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 40 ttgcaaaatcaatgtcttact 60 ||||||||||||||||||||| Sbjct: 229989 ttgcaaaatcaatgtcttact 230009
>gb|DQ167400.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare mitochondrion, complete genome Length = 490669 Score = 369 bits (186), Expect = 7e-99 Identities = 245/265 (92%), Gaps = 6/265 (2%) Strand = Plus / Minus Query: 129 attcaggtgcctaatcaaatagaacccttatggatttgctagttgataaggtaaatatcc 188 ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct: 120426 attcaggtgcctaatcaaatagaacccttattgatttgctagtttcaaaggtaaatatcc 120367 Query: 189 agcccactaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttct 248 ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 120366 agcccactaaatgctaggcgtaatgagga------cctccaaaaaaattcttttcgttct 120313 Query: 249 atgaactttaaggtgtatgaagtctcatagttaactcttgcagtggaacgatagagactc 308 ||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||| Sbjct: 120312 atgaactttaaggtgtatgaagtctcatattccactcttgcagcagaacgatagagactc 120253 Query: 309 catttcacttaggttgatttaatttagaccagaggcagacctaagtcaaggtaatcctcc 368 ||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||| | Sbjct: 120252 catttaacttaggttgatttaatttaggccggaggcagacctaagtcaaggtaatccttc 120193 Query: 369 tttgaaacactttggtattgctcct 393 ||||||||||||||||||||||||| Sbjct: 120192 tttgaaacactttggtattgctcct 120168 Score = 369 bits (186), Expect = 7e-99 Identities = 245/265 (92%), Gaps = 6/265 (2%) Strand = Plus / Minus Query: 129 attcaggtgcctaatcaaatagaacccttatggatttgctagttgataaggtaaatatcc 188 ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct: 25845 attcaggtgcctaatcaaatagaacccttattgatttgctagtttcaaaggtaaatatcc 25786 Query: 189 agcccactaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttct 248 ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 25785 agcccactaaatgctaggcgtaatgagga------cctccaaaaaaattcttttcgttct 25732 Query: 249 atgaactttaaggtgtatgaagtctcatagttaactcttgcagtggaacgatagagactc 308 ||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||| Sbjct: 25731 atgaactttaaggtgtatgaagtctcatattccactcttgcagcagaacgatagagactc 25672 Query: 309 catttcacttaggttgatttaatttagaccagaggcagacctaagtcaaggtaatcctcc 368 ||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||| | Sbjct: 25671 catttaacttaggttgatttaatttaggccggaggcagacctaagtcaaggtaatccttc 25612 Query: 369 tttgaaacactttggtattgctcct 393 ||||||||||||||||||||||||| Sbjct: 25611 tttgaaacactttggtattgctcct 25587 Score = 186 bits (94), Expect = 5e-44 Identities = 115/122 (94%) Strand = Plus / Minus Query: 6 ggagcttattatgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcata 65 |||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||| Sbjct: 120537 ggagcttattatgcaatgaacatagtggatcttcttgcaaaatcaatgtcttacttcatg 120478 Query: 66 gattcgagagaataggagaacagtagcctgacaaacagtcggttcagtccgattcaggtg 125 |||||||||||||||||||||||| |||||||||| ||| |||||||||||||||||||| Sbjct: 120477 gattcgagagaataggagaacagtcgcctgacaaatagttggttcagtccgattcaggtg 120418 Query: 126 cc 127 || Sbjct: 120417 cc 120416 Score = 186 bits (94), Expect = 5e-44 Identities = 115/122 (94%) Strand = Plus / Minus Query: 6 ggagcttattatgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcata 65 |||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||| Sbjct: 25956 ggagcttattatgcaatgaacatagtggatcttcttgcaaaatcaatgtcttacttcatg 25897 Query: 66 gattcgagagaataggagaacagtagcctgacaaacagtcggttcagtccgattcaggtg 125 |||||||||||||||||||||||| |||||||||| ||| |||||||||||||||||||| Sbjct: 25896 gattcgagagaataggagaacagtcgcctgacaaatagttggttcagtccgattcaggtg 25837 Query: 126 cc 127 || Sbjct: 25836 cc 25835 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 40 ttgcaaaatcaatgtcttact 60 ||||||||||||||||||||| Sbjct: 229986 ttgcaaaatcaatgtcttact 230006
>dbj|BA000029.3| Oryza sativa (japonica cultivar-group) mitochondrial DNA, complete genome Length = 490520 Score = 369 bits (186), Expect = 7e-99 Identities = 245/265 (92%), Gaps = 6/265 (2%) Strand = Plus / Minus Query: 129 attcaggtgcctaatcaaatagaacccttatggatttgctagttgataaggtaaatatcc 188 ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct: 120368 attcaggtgcctaatcaaatagaacccttattgatttgctagtttcaaaggtaaatatcc 120309 Query: 189 agcccactaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttct 248 ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 120308 agcccactaaatgctaggcgtaatgagga------cctccaaaaaaattcttttcgttct 120255 Query: 249 atgaactttaaggtgtatgaagtctcatagttaactcttgcagtggaacgatagagactc 308 ||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||| Sbjct: 120254 atgaactttaaggtgtatgaagtctcatattccactcttgcagcagaacgatagagactc 120195 Query: 309 catttcacttaggttgatttaatttagaccagaggcagacctaagtcaaggtaatcctcc 368 ||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||| | Sbjct: 120194 catttaacttaggttgatttaatttaggccggaggcagacctaagtcaaggtaatccttc 120135 Query: 369 tttgaaacactttggtattgctcct 393 ||||||||||||||||||||||||| Sbjct: 120134 tttgaaacactttggtattgctcct 120110 Score = 369 bits (186), Expect = 7e-99 Identities = 245/265 (92%), Gaps = 6/265 (2%) Strand = Plus / Minus Query: 129 attcaggtgcctaatcaaatagaacccttatggatttgctagttgataaggtaaatatcc 188 ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct: 25841 attcaggtgcctaatcaaatagaacccttattgatttgctagtttcaaaggtaaatatcc 25782 Query: 189 agcccactaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttct 248 ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 25781 agcccactaaatgctaggcgtaatgagga------cctccaaaaaaattcttttcgttct 25728 Query: 249 atgaactttaaggtgtatgaagtctcatagttaactcttgcagtggaacgatagagactc 308 ||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||| Sbjct: 25727 atgaactttaaggtgtatgaagtctcatattccactcttgcagcagaacgatagagactc 25668 Query: 309 catttcacttaggttgatttaatttagaccagaggcagacctaagtcaaggtaatcctcc 368 ||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||| | Sbjct: 25667 catttaacttaggttgatttaatttaggccggaggcagacctaagtcaaggtaatccttc 25608 Query: 369 tttgaaacactttggtattgctcct 393 ||||||||||||||||||||||||| Sbjct: 25607 tttgaaacactttggtattgctcct 25583 Score = 202 bits (102), Expect = 9e-49 Identities = 117/122 (95%) Strand = Plus / Minus Query: 6 ggagcttattatgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcata 65 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 120479 ggagcttattatgcaatgaacataatggatcttattgcaaaatcaatgtcttacttcatg 120420 Query: 66 gattcgagagaataggagaacagtagcctgacaaacagtcggttcagtccgattcaggtg 125 |||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 120419 gatttgagagaataggagaacagtagcctgacaaatagttggttcagtccgattcaggtg 120360 Query: 126 cc 127 || Sbjct: 120359 cc 120358 Score = 202 bits (102), Expect = 9e-49 Identities = 117/122 (95%) Strand = Plus / Minus Query: 6 ggagcttattatgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcata 65 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 25952 ggagcttattatgcaatgaacataatggatcttattgcaaaatcaatgtcttacttcatg 25893 Query: 66 gattcgagagaataggagaacagtagcctgacaaacagtcggttcagtccgattcaggtg 125 |||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||||| Sbjct: 25892 gatttgagagaataggagaacagtagcctgacaaatagttggttcagtccgattcaggtg 25833 Query: 126 cc 127 || Sbjct: 25832 cc 25831 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 40 ttgcaaaatcaatgtcttact 60 ||||||||||||||||||||| Sbjct: 229865 ttgcaaaatcaatgtcttact 229885
>emb|AL731758.4|CNS08C87 Oryza sativa chromosome 12, . BAC OSJNBa0029K06 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 154442 Score = 353 bits (178), Expect = 4e-94 Identities = 243/265 (91%), Gaps = 6/265 (2%) Strand = Plus / Plus Query: 129 attcaggtgcctaatcaaatagaacccttatggatttgctagttgataaggtaaatatcc 188 ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct: 140555 attcaggtgcctaatcaaatagaacccttattgatttgctagtttcaaaggtaaatatcc 140614 Query: 189 agcccactaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttct 248 ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 140615 agcccactaaatgctaggcgtaatgagga------cctccaaaaaaattcttttcgttct 140668 Query: 249 atgaactttaaggtgtatgaagtctcatagttaactcttgcagtggaacgatagagactc 308 || |||||||||||||||||||||||||| | |||||||||| ||||||||||||||| Sbjct: 140669 ataaactttaaggtgtatgaagtctcatattccactcttgcagcagaacgatagagactc 140728 Query: 309 catttcacttaggttgatttaatttagaccagaggcagacctaagtcaaggtaatcctcc 368 ||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||| | Sbjct: 140729 catttaacttaggttgatttaatttaggccggaggcagacctaagtcaaggtaatccttc 140788 Query: 369 tttgaaacactttggtattgctcct 393 |||||||||||||||||||||||| Sbjct: 140789 attgaaacactttggtattgctcct 140813 Score = 44.1 bits (22), Expect = 0.51 Identities = 22/22 (100%) Strand = Plus / Plus Query: 106 ggttcagtccgattcaggtgcc 127 |||||||||||||||||||||| Sbjct: 140544 ggttcagtccgattcaggtgcc 140565
>emb|AL928775.2|CNS08CC5 Oryza sativa chromosome 12, . BAC OSJNBa0030N06 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 146444 Score = 353 bits (178), Expect = 4e-94 Identities = 243/265 (91%), Gaps = 6/265 (2%) Strand = Plus / Plus Query: 129 attcaggtgcctaatcaaatagaacccttatggatttgctagttgataaggtaaatatcc 188 ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| Sbjct: 136297 attcaggtgcctaatcaaatagaacccttattgatttgctagtttcaaaggtaaatatcc 136356 Query: 189 agcccactaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttct 248 ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 136357 agcccactaaatgctaggcgtaatgagga------cctccaaaaaaattcttttcgttct 136410 Query: 249 atgaactttaaggtgtatgaagtctcatagttaactcttgcagtggaacgatagagactc 308 |||||||||||||||||| |||||||||| | |||||||||| ||||||||||||||| Sbjct: 136411 atgaactttaaggtgtataaagtctcatattccactcttgcagcagaacgatagagactc 136470 Query: 309 catttcacttaggttgatttaatttagaccagaggcagacctaagtcaaggtaatcctcc 368 ||||| ||||||||||||||||||||| || |||||| |||||||||||||||||||| | Sbjct: 136471 catttaacttaggttgatttaatttaggccggaggcaaacctaagtcaaggtaatccttc 136530 Query: 369 tttgaaacactttggtattgctcct 393 ||||||||||||||||||||||||| Sbjct: 136531 tttgaaacactttggtattgctcct 136555 Score = 194 bits (98), Expect = 2e-46 Identities = 116/122 (95%) Strand = Plus / Plus Query: 6 ggagcttattatgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcata 65 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 136186 ggagcttattatgcaatgaacataatggatcttattgcaaaatcaatgtcttacttcatg 136245 Query: 66 gattcgagagaataggagaacagtagcctgacaaacagtcggttcagtccgattcaggtg 125 |||| |||||||||||||||||||||||| ||||| ||| |||||||||||||||||||| Sbjct: 136246 gatttgagagaataggagaacagtagcctaacaaatagttggttcagtccgattcaggtg 136305 Query: 126 cc 127 || Sbjct: 136306 cc 136307
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 351 bits (177), Expect = 2e-93 Identities = 423/503 (84%), Gaps = 19/503 (3%) Strand = Plus / Minus Query: 16 atgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcatagattcgagag 75 ||||||| |||| ||| |||||||||| |||||| |||||||||| ||| |||||||| | Sbjct: 53107 atgcaatcaacagaattgatcttattgaaaaatcgatgtcttactccatggattcgaggg 53048 Query: 76 aataggagaacagtagcctgacaaacagtcggttcagtccgattcaggtgccaattcagg 135 || | ||||||| |||||||||||| | | |||| ||||||||||||| |||||||||| Sbjct: 53047 aaaaagagaacaatagcctgacaaatattttgttcggtccgattcaggtaccaattcagg 52988 Query: 136 tgcctaatcaaatagaaccc-ttatggatttgctag----ttgataaggtaaatatccag 190 |||| ||||||||||| |||| |||| | | | |||||||||| |||| |||| Sbjct: 52987 tgcc-----aaatagaaccccttattgattggtttgatcattgataaggtgaatacccag 52933 Query: 191 cccactaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctat 250 ||| | |||||||||| ||||||| |||||| |||| ||| ||| ||||||| | |||| Sbjct: 52932 tccattcaatgctaggcataatgagtataaggacctcaaaataacctcttttcatcctat 52873 Query: 251 gaactttaaggtgtatgaagtctcatagttaactcttgcagtggaacgatagagactcca 310 ||||||||||||||||||||| ||||| || ||| ||| ||||| |||||||||||||| Sbjct: 52872 gaactttaaggtgtatgaagtatcatattttacttttggggtggatcgatagagactcca 52813 Query: 311 tttcacttaggttgatttaatttagaccagaggcagacctaagtcaaggtaatcctcctt 370 ||| |||||||||||| || | || |||||||||||| |||||||||| ||| ||| Sbjct: 52812 tttaacttaggttgatcta-----ggccggaggcagacctacgtcaaggtaacccttctt 52758 Query: 371 tgaaacactttggtattgctcctagatagatcataatacaaaaaatcaatcagagcacag 430 ||||||||||||||||||||||| ||| || |||||||| ||| ||||||||| || Sbjct: 52757 tgaaacactttggtattgctcctggat----cagaatacaaataatgaatcagagcgcat 52702 Query: 431 ggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatctttaaat 490 ||||||||||||||||||| | || |||||||| |||||||||||||||||||||| || Sbjct: 52701 ggagccatctcattatcttcctgtcaagaaaaaatatggtggactaactgatctttctat 52642 Query: 491 cagtttatgaaagagcccaatgc 513 ||||| ||||||||||||||||| Sbjct: 52641 cagttaatgaaagagcccaatgc 52619 Score = 105 bits (53), Expect = 2e-19 Identities = 59/61 (96%) Strand = Plus / Minus Query: 522 gcatgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgtttt 581 ||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| Sbjct: 52608 gcatgttgggtctttgaaacagttcgaatcatttcgataataatcagtttgatctgtttt 52549 Query: 582 a 582 | Sbjct: 52548 a 52548
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 285 bits (144), Expect = 8e-74 Identities = 348/414 (84%), Gaps = 12/414 (2%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| |||| |||| | | | |||||||||| ||||||| |||||| |||| || Sbjct: 56071 ttgataaggtgaatacccagtctattcaatgctaggcctaatgagtataaggacctcaaa 56012 Query: 231 aaaact-tcttttcgttctatgaactttaaggtgtatgaagtctcatagttaactcttgc 289 |||| | ||||||||| ||||||||||||||||||||||||| ||||| || | |||| Sbjct: 56011 aaaaatctcttttcgtcctatgaactttaaggtgtatgaagtttcatatttgattcttta 55952 Query: 290 agtggaacgatagagactccatttcacttaggttgatttaatttagaccagaggcagacc 349 | |||||||||||||||||||| ||||| |||||| || | ||| ||||||||| Sbjct: 55951 atcagaacgatagagactccatttaacttaagttgatcta-----ggccaaaggcagacc 55897 Query: 350 taagtcaaggtaatcctcctttgaaacactttggtattgctcctagatagatcataatac 409 || |||||| ||| |||| ||||||| ||||||||| ||||||| ||| || ||| Sbjct: 55896 tacgtcaagataaccctc-tttgaaaaactttggtagtgctcctggat----cagaatca 55842 Query: 410 aaaaaatcaatcagagcacagggagccatctcattatctttccgtaaagaaaaactatgg 469 ||| ||| |||||||||||| ||||||||||| ||||||||| || |||||||| ||||| Sbjct: 55841 aaataatgaatcagagcacatggagccatctctttatctttctgtcaagaaaaaatatgg 55782 Query: 470 tggactaactgatctttaaatcagtttatgaaagagcccaatgc-nnnnnnntgcatgtt 528 ||||||||||||| |||| ||||||| ||||||||||||||||| |||||||| Sbjct: 55781 tggactaactgatatttatatcagttaatgaaagagcccaatgcaaaaaaaatgcatgtt 55722 Query: 529 gggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgtttta 582 ||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 55721 gggtctttgaaacagttcaaatcattttgataataatcagtttgatctgtttta 55668 Score = 42.1 bits (21), Expect = 2.0 Identities = 57/69 (82%) Strand = Plus / Minus Query: 33 gatcttattgcaaaatcaatgtcttacttcatagattcgagagaataggagaacagtagc 92 |||||||||| ||||| |||||||||| ||| || ||| ||| | ||||||| |||| Sbjct: 56204 gatcttattgagaaatcgatgtcttactccatgactttgagggaacaagagaacaatagc 56145 Query: 93 ctgacaaac 101 ||||||||| Sbjct: 56144 ctgacaaac 56136
>emb|AJ429635.1|VVI429635 Vitis vinifera chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1487 Score = 285 bits (144), Expect = 8e-74 Identities = 348/414 (84%), Gaps = 12/414 (2%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| |||| |||| | | | |||||||||| ||||||| |||||| |||| || Sbjct: 417 ttgataaggtgaatacccagtctattcaatgctaggcctaatgagtataaggacctcaaa 358 Query: 231 aaaact-tcttttcgttctatgaactttaaggtgtatgaagtctcatagttaactcttgc 289 |||| | ||||||||| ||||||||||||||||||||||||| ||||| || | |||| Sbjct: 357 aaaaatctcttttcgtcctatgaactttaaggtgtatgaagtttcatatttgattcttta 298 Query: 290 agtggaacgatagagactccatttcacttaggttgatttaatttagaccagaggcagacc 349 | |||||||||||||||||||| ||||| |||||| || | ||| ||||||||| Sbjct: 297 atcagaacgatagagactccatttaacttaagttgatcta-----ggccaaaggcagacc 243 Query: 350 taagtcaaggtaatcctcctttgaaacactttggtattgctcctagatagatcataatac 409 || |||||| ||| |||| ||||||| ||||||||| ||||||| ||| || ||| Sbjct: 242 tacgtcaagataaccctc-tttgaaaaactttggtagtgctcctggat----cagaatca 188 Query: 410 aaaaaatcaatcagagcacagggagccatctcattatctttccgtaaagaaaaactatgg 469 ||| ||| |||||||||||| ||||||||||| ||||||||| || |||||||| ||||| Sbjct: 187 aaataatgaatcagagcacatggagccatctctttatctttctgtcaagaaaaaatatgg 128 Query: 470 tggactaactgatctttaaatcagtttatgaaagagcccaatgc-nnnnnnntgcatgtt 528 ||||||||||||| |||| ||||||| ||||||||||||||||| |||||||| Sbjct: 127 tggactaactgatatttatatcagttaatgaaagagcccaatgcaaaaaaaatgcatgtt 68 Query: 529 gggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgtttta 582 ||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct: 67 gggtctttgaaacagttcaaatcattttgataataatcagtttgatctgtttta 14
>emb|AJ429673.1|OBA429673 Oncotheca balansae chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1528 Score = 274 bits (138), Expect = 3e-70 Identities = 343/412 (83%), Gaps = 10/412 (2%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| |||| |||| || | |||||||||| ||||||| ||||| |||| || Sbjct: 415 ttgataaggtgaatacccagtacattcaatgctaggcataatgagtataagaacctcaaa 356 Query: 231 aaaacttcttttcgttctatgaactttaaggtgtatgaagtctcatagttaactcttgca 290 |||| ||||||||| ||||||||||||||||||||||||| ||||| || | | || | Sbjct: 355 aaaatctcttttcgtcctatgaactttaaggtgtatgaagtttcatatttgattttta-a 297 Query: 291 gtggaacgatagagactccatttcacttaggttgatttaatttagaccagaggcagacct 350 || || ||||||||||| ||||| |||||||||||| || | |||||||||||||| Sbjct: 296 gtagagcgatagagacttcatttaacttaggttgatcta-----ggccagaggcagacct 242 Query: 351 aagtcaaggtaatcctcctttgaaacactttggtattgctcctagatagatcataataca 410 | |||||| ||| | ||||||||||||||||||| ||||||| ||| || ||| || Sbjct: 241 acgtcaagataactcccctttgaaacactttggtagtgctcctggat----cagaatcca 186 Query: 411 aaaaatcaatcagagcacagggagccatctcattatctttccgtaaagaaaaactatggt 470 || ||| |||||||||||| ||||||||||| |||| |||| || || || || ||||| Sbjct: 185 aataatgaatcagagcacatggagccatctccttatttttctgtcaaaaacaaatatggc 126 Query: 471 ggactaactgatctttaaatcagtttatgaaagagcccaatgcnnnnnnntgcatgttgg 530 |||||||||||| |||| ||||||| ||||||||||||||||| |||||||||| Sbjct: 125 ggactaactgatatttatatcagttaatgaaagagcccaatgcaaaaaaatgcatgttgg 66 Query: 531 gtctttgaaacagttcaaatcatttcgataataatccgtttgatctgtttta 582 ||||||||||||||||| ||||||| |||||||||| ||||||||||||||| Sbjct: 65 gtctttgaaacagttcagatcattttgataataatcagtttgatctgtttta 14
>gb|AY819950.1| Persea thunbergii isolate 6 tRNA-Val (trnV) gene and trnV-trnM intergenic spacer, partial sequence; chloroplast Length = 678 Score = 268 bits (135), Expect = 2e-68 Identities = 389/472 (82%), Gaps = 15/472 (3%) Strand = Plus / Minus Query: 16 atgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcatagattcgagag 75 ||||||| |||| ||| |||||||||| ||||| |||||||||| ||| |||||||| | Sbjct: 462 atgcaatcaacagaattgatcttattgagaaatcgatgtcttactccatggattcgaggg 403 Query: 76 aataggagaacagtagcctgacaaacagtcggttcagtccgattcaggtgccaattcagg 135 || | ||||||| |||||||||||| | | |||| |||||||||||||||||||||||| Sbjct: 402 aacaagagaacaatagcctgacaaatattttgttcggtccgattcaggtgccaattcagg 343 Query: 136 tgcctaatcaaatagaaccctt-atggatttgctagttgataaggtaaatatccagccca 194 | || ||||||||||| | || | |||| | |||||||||| |||| |||| || Sbjct: 342 tacc-----aaatagaacccatcattggtttgatcattgataaggtgaatacccaggccc 288 Query: 195 ctaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaac 254 | |||||||||| |||||||||||||| |||| ||| ||| ||||||||| |||||||| Sbjct: 287 ttcaatgctaggcataatgaggataaggacctcaaaataacctcttttcgtcctatgaac 228 Query: 255 tttaaggtgtatgaagtctcatagttaactcttgcagtggaacgatagagactccatttc 314 ||||||||||||||||| ||||| || ||||||| | ||| |||||||||||||||| Sbjct: 227 tttaaggtgtatgaagtatcatatttgactcttggggcggattgatagagactccattta 168 Query: 315 acttaggttgatttaatttagaccagaggcagacctaagtcaaggtaatcctcctttgaa 374 |||||||||| || ||| || |||||||||||| |||| ||||| ||| ||||||| Sbjct: 167 acttaggttg-----atctaggccggaggcagacctacgtcagggtaacccttctttgaa 113 Query: 375 acactttggtattgctcctagatagatcataatacaaaaaatcaatcagagcacagggag 434 |||||||||||||||||| ||||| ||| |||| ||| |||| ||||||| |||| Sbjct: 112 acactttggtattgctcc----cggatcagaattcaaataatgaatccgagcacatggag 57 Query: 435 ccatctcattatctttccgtaaagaaaaactatggtggactaactgatcttt 486 ||||||| ||||||| | || |||||||| |||||| ||||| | ||||||| Sbjct: 56 ccatctcgttatcttcctgtcaagaaaaaatatggtagactagccgatcttt 5
>gb|AY819947.1| Persea thunbergii isolate 3 tRNA-Val (trnV) gene and trnV-trnM intergenic spacer, partial sequence; chloroplast Length = 677 Score = 268 bits (135), Expect = 2e-68 Identities = 389/472 (82%), Gaps = 15/472 (3%) Strand = Plus / Minus Query: 16 atgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcatagattcgagag 75 ||||||| |||| ||| |||||||||| ||||| |||||||||| ||| |||||||| | Sbjct: 462 atgcaatcaacagaattgatcttattgagaaatcgatgtcttactccatggattcgaggg 403 Query: 76 aataggagaacagtagcctgacaaacagtcggttcagtccgattcaggtgccaattcagg 135 || | ||||||| |||||||||||| | | |||| |||||||||||||||||||||||| Sbjct: 402 aacaagagaacaatagcctgacaaatattttgttcggtccgattcaggtgccaattcagg 343 Query: 136 tgcctaatcaaatagaaccctt-atggatttgctagttgataaggtaaatatccagccca 194 | || ||||||||||| | || | |||| | |||||||||| |||| |||| || Sbjct: 342 tacc-----aaatagaacccatcattggtttgatcattgataaggtgaatacccaggccc 288 Query: 195 ctaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaac 254 | |||||||||| |||||||||||||| |||| ||| ||| ||||||||| |||||||| Sbjct: 287 ttcaatgctaggcataatgaggataaggacctcaaaataacctcttttcgtcctatgaac 228 Query: 255 tttaaggtgtatgaagtctcatagttaactcttgcagtggaacgatagagactccatttc 314 ||||||||||||||||| ||||| || ||||||| | ||| |||||||||||||||| Sbjct: 227 tttaaggtgtatgaagtatcatatttgactcttggggcggattgatagagactccattta 168 Query: 315 acttaggttgatttaatttagaccagaggcagacctaagtcaaggtaatcctcctttgaa 374 ||||| |||| || ||| || |||||||||||| |||| ||||| ||| ||||||| Sbjct: 167 acttatgttg-----atctaggccggaggcagacctacgtcagggtaacccttctttgaa 113 Query: 375 acactttggtattgctcctagatagatcataatacaaaaaatcaatcagagcacagggag 434 |||||||||||||||||| ||||| ||| |||| ||| |||| ||||||| |||| Sbjct: 112 acactttggtattgctcc----cggatcagaattcaaataatgaatccgagcacatggag 57 Query: 435 ccatctcattatctttccgtaaagaaaaactatggtggactaactgatcttt 486 ||||||| ||||||||| || |||||||| |||||| ||||| | ||||||| Sbjct: 56 ccatctcgttatctttctgtcaagaaaaaatatggtagactagccgatcttt 5
>gb|AY819945.1| Persea thunbergii isolate 1 tRNA-Val (trnV) gene and trnV-trnM intergenic spacer, partial sequence; chloroplast Length = 677 Score = 268 bits (135), Expect = 2e-68 Identities = 389/472 (82%), Gaps = 15/472 (3%) Strand = Plus / Minus Query: 16 atgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcatagattcgagag 75 ||||||| |||| ||| |||||||||| ||||| |||||||||| ||| |||||||| | Sbjct: 462 atgcaatcaacagaattgatcttattgagaaatcgatgtcttactccatggattcgaggg 403 Query: 76 aataggagaacagtagcctgacaaacagtcggttcagtccgattcaggtgccaattcagg 135 || | ||||||| |||||||||||| | | |||| |||||||||||||||||||||||| Sbjct: 402 aacaagagaacaatagcctgacaaatattttgttcggtccgattcaggtgccaattcagg 343 Query: 136 tgcctaatcaaatagaaccctt-atggatttgctagttgataaggtaaatatccagccca 194 | || ||||||||||| | || | |||| | |||||||||| |||| |||| || Sbjct: 342 tacc-----aaatagaacccatcattggtttgatcattgataaggtgaatacccaggccc 288 Query: 195 ctaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaac 254 | |||||||||| |||||||||||||| |||| ||| ||| ||||||||| |||||||| Sbjct: 287 ttcaatgctaggcataatgaggataaggacctcaaaataacctcttttcgtcctatgaac 228 Query: 255 tttaaggtgtatgaagtctcatagttaactcttgcagtggaacgatagagactccatttc 314 ||||||||||||||||| ||||| || ||||||| | ||| |||||||||||||||| Sbjct: 227 tttaaggtgtatgaagtatcatatttgactcttggggcggattgatagagactccattta 168 Query: 315 acttaggttgatttaatttagaccagaggcagacctaagtcaaggtaatcctcctttgaa 374 |||||||||| || ||| || |||||||||||| |||| ||||| ||| ||||||| Sbjct: 167 acttaggttg-----atctaggccggaggcagacctacgtcagggtaacccttctttgaa 113 Query: 375 acactttggtattgctcctagatagatcataatacaaaaaatcaatcagagcacagggag 434 |||||||||||||||||| ||||| ||| |||| ||| |||| ||||||| |||| Sbjct: 112 acactttggtattgctcc----cggatcagaattcaaataatgaatccgagcacatggag 57 Query: 435 ccatctcattatctttccgtaaagaaaaactatggtggactaactgatcttt 486 ||||||| ||||||| | || |||||||| |||||| ||||| | ||||||| Sbjct: 56 ccatctcgttatcttcctgtcaagaaaaaatatggtagactagccgatcttt 5
>gb|AY819935.1| Machilus kusanoi isolate 3 tRNA-Val (trnV) gene and trnV-trnM intergenic spacer, partial sequence; chloroplast Length = 685 Score = 268 bits (135), Expect = 2e-68 Identities = 389/472 (82%), Gaps = 15/472 (3%) Strand = Plus / Minus Query: 16 atgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcatagattcgagag 75 ||||||| |||| ||| |||||||||| ||||| |||||||||| ||| |||||||| | Sbjct: 462 atgcaatcaacagaattgatcttattgagaaatcgatgtcttactccatggattcgaggg 403 Query: 76 aataggagaacagtagcctgacaaacagtcggttcagtccgattcaggtgccaattcagg 135 || | ||||||| |||||||||||| | | |||| |||||||||||||||||||||||| Sbjct: 402 aacaagagaacaatagcctgacaaatattttgttcggtccgattcaggtgccaattcagg 343 Query: 136 tgcctaatcaaatagaaccctt-atggatttgctagttgataaggtaaatatccagccca 194 | || ||||||||||| | || | |||| | |||||||||| |||| |||| || Sbjct: 342 tacc-----aaatagaacccatcattggtttgatcattgataaggtgaatacccaggccc 288 Query: 195 ctaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaac 254 | |||||||||| |||||||||||||| |||| ||| ||| ||||||||| |||||||| Sbjct: 287 ttcaatgctaggcataatgaggataaggacctcaaaataacctcttttcgtcctatgaac 228 Query: 255 tttaaggtgtatgaagtctcatagttaactcttgcagtggaacgatagagactccatttc 314 ||||||||||||||||| ||||| || ||||||| | ||| |||||||||||||||| Sbjct: 227 tttaaggtgtatgaagtatcatatttgactcttggggcggattgatagagactccattta 168 Query: 315 acttaggttgatttaatttagaccagaggcagacctaagtcaaggtaatcctcctttgaa 374 |||||||||| || ||| || |||||||||||| |||| ||||| ||| ||||||| Sbjct: 167 acttaggttg-----atctaggccggaggcagacctacgtcagggtaacccttctttgaa 113 Query: 375 acactttggtattgctcctagatagatcataatacaaaaaatcaatcagagcacagggag 434 |||||||||||||||||| ||||| ||| |||| ||| |||| ||||||| |||| Sbjct: 112 acactttggtattgctcc----cggatcagaattcaaataatgaatccgagcacatggag 57 Query: 435 ccatctcattatctttccgtaaagaaaaactatggtggactaactgatcttt 486 ||||||| ||||||| | || |||||||| |||||| ||||| | ||||||| Sbjct: 56 ccatctcgttatcttcctgtcaagaaaaaatatggtagactagccgatcttt 5
>gb|AY819933.1| Machilus kusanoi isolate 1 tRNA-Val (trnV) gene and trnV-trnM intergenic spacer, partial sequence; chloroplast Length = 684 Score = 268 bits (135), Expect = 2e-68 Identities = 389/472 (82%), Gaps = 15/472 (3%) Strand = Plus / Minus Query: 16 atgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcatagattcgagag 75 ||||||| |||| ||| |||||||||| ||||| |||||||||| ||| |||||||| | Sbjct: 462 atgcaatcaacagaattgatcttattgagaaatcgatgtcttactccatggattcgaggg 403 Query: 76 aataggagaacagtagcctgacaaacagtcggttcagtccgattcaggtgccaattcagg 135 || | ||||||| |||||||||||| | | |||| |||||||||||||||||||||||| Sbjct: 402 aacaagagaacaatagcctgacaaatattttgttcggtccgattcaggtgccaattcagg 343 Query: 136 tgcctaatcaaatagaaccctt-atggatttgctagttgataaggtaaatatccagccca 194 | || ||||||||||| | || | |||| | |||||||||| |||| |||| || Sbjct: 342 tacc-----aaatagaacccatcattggtttgatcattgataaggtgaatacccaggccc 288 Query: 195 ctaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaac 254 | |||||||||| |||||||||||||| |||| ||| ||| ||||||||| |||||||| Sbjct: 287 ttcaatgctaggcataatgaggataaggacctcaaaataacctcttttcgtcctatgaac 228 Query: 255 tttaaggtgtatgaagtctcatagttaactcttgcagtggaacgatagagactccatttc 314 ||||||||||||||||| ||||| || ||||||| | ||| |||||||||||||||| Sbjct: 227 tttaaggtgtatgaagtatcatatttgactcttggggcggattgatagagactccattta 168 Query: 315 acttaggttgatttaatttagaccagaggcagacctaagtcaaggtaatcctcctttgaa 374 |||||||||| || ||| || |||||||||||| |||| ||||| ||| ||||||| Sbjct: 167 acttaggttg-----atctaggccggaggcagacctacgtcagggtaacccttctttgaa 113 Query: 375 acactttggtattgctcctagatagatcataatacaaaaaatcaatcagagcacagggag 434 |||||||||||||||||| ||||| ||| |||| ||| |||| ||||||| |||| Sbjct: 112 acactttggtattgctcc----cggatcagaattcaaataatgaatccgagcacatggag 57 Query: 435 ccatctcattatctttccgtaaagaaaaactatggtggactaactgatcttt 486 ||||||| ||||||| | || |||||||| |||||| ||||| | ||||||| Sbjct: 56 ccatctcgttatcttcctgtcaagaaaaaatatggtagactagccgatcttt 5
>gb|AY819937.1| Machilus kusanoi isolate 5 tRNA-Val (trnV) gene and trnV-trnM intergenic spacer, partial sequence; chloroplast Length = 684 Score = 264 bits (133), Expect = 3e-67 Identities = 381/462 (82%), Gaps = 15/462 (3%) Strand = Plus / Minus Query: 16 atgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcatagattcgagag 75 ||||||| |||| ||| |||||||||| ||||| |||||||||| ||| |||||||| | Sbjct: 462 atgcaatcaacagaattgatcttattgagaaatcgatgtcttactccatggattcgaggg 403 Query: 76 aataggagaacagtagcctgacaaacagtcggttcagtccgattcaggtgccaattcagg 135 || | ||||||| |||||||||||| | | |||| |||||||||||||||||||||||| Sbjct: 402 aacaagagaacaatagcctgacaaatattttgttcggtccgattcaggtgccaattcagg 343 Query: 136 tgcctaatcaaatagaaccctt-atggatttgctagttgataaggtaaatatccagccca 194 | || ||||||||||| | || | |||| | |||||||||| |||| |||| || Sbjct: 342 tacc-----aaatagaacccatcattggtttgatcattgataaggtgaatacccaggccc 288 Query: 195 ctaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaac 254 | |||||||||| |||||||||||||| |||| ||| ||| ||||||||| |||||||| Sbjct: 287 ttcaatgctaggcataatgaggataaggacctcaaaataacctcttttcgtcctatgaac 228 Query: 255 tttaaggtgtatgaagtctcatagttaactcttgcagtggaacgatagagactccatttc 314 ||||||||||||||||| ||||| || ||||||| | ||| |||||||||||||||| Sbjct: 227 tttaaggtgtatgaagtatcatatttgactcttggggcggattgatagagactccattta 168 Query: 315 acttaggttgatttaatttagaccagaggcagacctaagtcaaggtaatcctcctttgaa 374 |||||||||| || ||| || |||||||||||| |||| ||||| ||| ||||||| Sbjct: 167 acttaggttg-----atctaggccggaggcagacctacgtcagggtaacccttctttgaa 113 Query: 375 acactttggtattgctcctagatagatcataatacaaaaaatcaatcagagcacagggag 434 |||||||||||||||||| ||||| ||| |||| ||| |||| ||||||| |||| Sbjct: 112 acactttggtattgctcc----cggatcagaattcaaataatgaatccgagcacatggag 57 Query: 435 ccatctcattatctttccgtaaagaaaaactatggtggacta 476 ||||||| ||||||| | || |||||||| |||||| ||||| Sbjct: 56 ccatctcgttatcttcctgtcaagaaaaaatatggtagacta 15
>gb|AY819948.1| Persea thunbergii isolate 4 tRNA-Val (trnV) gene and trnV-trnM intergenic spacer, partial sequence; chloroplast Length = 677 Score = 260 bits (131), Expect = 5e-66 Identities = 388/472 (82%), Gaps = 15/472 (3%) Strand = Plus / Minus Query: 16 atgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcatagattcgagag 75 ||||||| |||| ||| |||||||||| ||||| |||||||||| ||| |||||||| | Sbjct: 462 atgcaatcaacagaattgatcttattgagaaatcgatgtcttactccatggattcgaggg 403 Query: 76 aataggagaacagtagcctgacaaacagtcggttcagtccgattcaggtgccaattcagg 135 || | ||||||| |||||||||||| | | |||| |||||||||||||||||||||||| Sbjct: 402 aacaagagaacaatagcctgacaaatattttgttcggtccgattcaggtgccaattcagg 343 Query: 136 tgcctaatcaaatagaaccctt-atggatttgctagttgataaggtaaatatccagccca 194 | || ||||||||||| | || | |||| | |||||||||| |||| |||| || Sbjct: 342 tacc-----aaatagaacccatcattggtttgatcattgataaggtgaatacccaggccc 288 Query: 195 ctaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaac 254 | |||||||||| |||||||||||||| |||| ||| ||| ||||||||| |||||||| Sbjct: 287 ttcaatgctaggcataatgaggataaggacctcaaaataacctcttttcgtcctatgaac 228 Query: 255 tttaaggtgtatgaagtctcatagttaactcttgcagtggaacgatagagactccatttc 314 ||||||||||||||||| ||||| || ||||||| | ||| |||||||||||||||| Sbjct: 227 tttaaggtgtatgaagtatcatatttgactcttggggcggattgatagagactccattta 168 Query: 315 acttaggttgatttaatttagaccagaggcagacctaagtcaaggtaatcctcctttgaa 374 ||||| |||| || ||| || |||||||||||| |||| ||||| ||| ||||||| Sbjct: 167 acttatgttg-----atctaggccggaggcagacctacgtcagggtaacccttctttgaa 113 Query: 375 acactttggtattgctcctagatagatcataatacaaaaaatcaatcagagcacagggag 434 |||||||||||||||||| ||||| ||| |||| ||| |||| ||||||| |||| Sbjct: 112 acactttggtattgctcc----cggatcagaattcaaataatgaatccgagcacatggag 57 Query: 435 ccatctcattatctttccgtaaagaaaaactatggtggactaactgatcttt 486 ||||||| ||||||| | || |||||||| |||||| ||||| | ||||||| Sbjct: 56 ccatctcgttatcttcctgtcaagaaaaaatatggtagactagccgatcttt 5
>gb|AY819946.1| Persea thunbergii isolate 2 tRNA-Val (trnV) gene and trnV-trnM intergenic spacer, partial sequence; chloroplast Length = 677 Score = 260 bits (131), Expect = 5e-66 Identities = 388/472 (82%), Gaps = 15/472 (3%) Strand = Plus / Minus Query: 16 atgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcatagattcgagag 75 ||||||| |||| ||| |||||||||| ||||| |||||||||| ||| |||||||| | Sbjct: 462 atgcaatcaacagaattgatcttattgagaaatcgatgtcttactccatggattcgaggg 403 Query: 76 aataggagaacagtagcctgacaaacagtcggttcagtccgattcaggtgccaattcagg 135 || | ||||||| |||||||||||| | | |||| |||||||||||||||||||||||| Sbjct: 402 aacaagagaacaatagcctgacaaatattttgttcggtccgattcaggtgccaattcagg 343 Query: 136 tgcctaatcaaatagaaccctt-atggatttgctagttgataaggtaaatatccagccca 194 | || ||||||||||| | || | |||| | |||||||||| |||| |||| || Sbjct: 342 tacc-----aaatagaacccatcattggtttgatcattgataaggtgaatacccaggccc 288 Query: 195 ctaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaac 254 | |||||||||| |||||||||||||| |||| ||| ||| ||||||||| |||||||| Sbjct: 287 ttcaatgctaggcataatgaggataaggacctcaaaataacctcttttcgtcctatgaac 228 Query: 255 tttaaggtgtatgaagtctcatagttaactcttgcagtggaacgatagagactccatttc 314 ||||||||||||||||| ||||| || ||||||| | ||| |||||||||||||||| Sbjct: 227 tttaaggtgtatgaagtatcatatttgactcttggggcggattgatagagactccattta 168 Query: 315 acttaggttgatttaatttagaccagaggcagacctaagtcaaggtaatcctcctttgaa 374 |||||||||| || ||| || |||||||||||| |||| ||||| ||| ||||| | Sbjct: 167 acttaggttg-----atctaggccggaggcagacctacgtcagggtaacccttctttgta 113 Query: 375 acactttggtattgctcctagatagatcataatacaaaaaatcaatcagagcacagggag 434 |||||||||||||||||| ||||| ||| |||| ||| |||| ||||||| |||| Sbjct: 112 acactttggtattgctcc----cggatcagaattcaaataatgaatccgagcacatggag 57 Query: 435 ccatctcattatctttccgtaaagaaaaactatggtggactaactgatcttt 486 ||||||| ||||||| | || |||||||| |||||| ||||| | ||||||| Sbjct: 56 ccatctcgttatcttcctgtcaagaaaaaatatggtagactagccgatcttt 5
>gb|AY819934.1| Machilus kusanoi isolate 2 tRNA-Val (trnV) gene and trnV-trnM intergenic spacer, partial sequence; chloroplast Length = 685 Score = 258 bits (130), Expect = 2e-65 Identities = 382/463 (82%), Gaps = 16/463 (3%) Strand = Plus / Minus Query: 16 atgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcatagattcgagag 75 ||||||| |||| ||| |||||||||| ||||| |||||||||| ||| |||||||| | Sbjct: 463 atgcaatcaacagaattgatcttattgagaaatcgatgtcttactccatggattcgaggg 404 Query: 76 aataggagaacagtagcctgacaaacagtcggttcagtccgattcaggtgccaattcagg 135 || | ||||||| |||||||||||| | | |||| |||||||||||||||||||||||| Sbjct: 403 aacaagagaacaatagcctgacaaatattttgttcggtccgattcaggtgccaattcagg 344 Query: 136 tgcctaatcaaatagaaccctt-atggatttgctagttgataaggtaaatatccagccca 194 | || ||||||||||| | || | |||| | |||||||||| |||| |||| || Sbjct: 343 tacc-----aaatagaacccatcattggtttgatcattgataaggtgaatacccaggccc 289 Query: 195 ctaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaac 254 | |||||||||| |||||||||||||| |||| ||| ||| ||||||||| |||||||| Sbjct: 288 ttcaatgctaggcataatgaggataaggacctcaaaataacctcttttcgtcctatgaac 229 Query: 255 tttaaggtgtatgaagtctcatagttaactcttgcagtggaacgatagagactccatttc 314 ||||||||||||||||| ||||| || ||||||| | ||| |||||||||||||||| Sbjct: 228 tttaaggtgtatgaagtatcatatttgactcttggggcggattgatagagactccattta 169 Query: 315 acttaggttgatttaatttagaccagaggcagacctaagtcaaggtaatcctcctttgaa 374 |||||||||| || ||| || |||||||||||| |||| ||||| ||| ||||||| Sbjct: 168 acttaggttg-----atctaggccggaggcagacctacgtcagggtaacccttctttgaa 114 Query: 375 acactttggtattgctcctagatagatcataatacaaaaaatcaatcagagcacagggag 434 |||||||||||||||||| ||||| ||| |||| ||| |||| ||||||| |||| Sbjct: 113 acactttggtattgctcc----cggatcagaattcaaataatgaatccgagcacatggag 58 Query: 435 ccatctcattatctttc-cgtaaagaaaaactatggtggacta 476 ||||||| ||||||||| || |||||||| |||||| ||||| Sbjct: 57 ccatctcgttatctttcttgtcaagaaaaaatatggtagacta 15
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 258 bits (130), Expect = 2e-65 Identities = 326/393 (82%), Gaps = 18/393 (4%) Strand = Plus / Minus Query: 198 aatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaacttt 257 ||||| |||| ||||||| |||||| ||| ||| ||| ||||||||| |||||| |||| Sbjct: 52402 aatgccaggcataatgagtataaggatctcaaaagaacctcttttcgtcctatgagcttt 52343 Query: 258 aaggtgtatgaagtctcatagttaactcttgcagtggaacgatagagactccatttcact 317 ||||||||||||||||||| || |||||||||| ||| ||||||||||| ||||||| | Sbjct: 52342 gaggtgtatgaagtctcatattttactcttgcagcggagcgatagagactgcatttcatt 52283 Query: 318 taggttgatttaatttagaccagaggcagacctaagtcaaggtaatcctcctttgaaaca 377 ||| ||||| || | || |||||||||||| | ||||| | ||| ||||||||| Sbjct: 52282 tagattgatcta-----ggccgaaggcagacctaaataaaggtcacccttttttgaaaca 52228 Query: 378 ctttggtattgctcctagatagatcataatacaaaaaatcaatcagagcacagggagcca 437 |||||||||||||||||||| || ||||||| ||| |||||||||||| ||||||| Sbjct: 52227 ctttggtattgctcctagat----caggatacaaataatgaatcagagcacatggagcca 52172 Query: 438 tctca--------ttatctttccgtaaagaaaaactatggtggactaactgatctttaaa 489 ||||| ||||||| | ||||||||| |||||||||||||||||||||||| | Sbjct: 52171 tctcaatatcttcttatcttcctctaaagaaaa-ctatggtggactaactgatctttaca 52113 Query: 490 tcagtttatgaaagagcccaatgcnnnnnnntgcatgttgggtctttgaaacagttcaaa 549 |||||| ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 52112 tcagttgatgaaagagcccaatgcaacaaaatgcatgttgggtctttgaaacagttcaaa 52053 Query: 550 tcatttcgataataatccgtttgatctgtttta 582 |||||||||||||||| |||| ||||||||| Sbjct: 52052 tcatttcgataataataagttttctctgtttta 52020 Score = 85.7 bits (43), Expect = 1e-13 Identities = 85/99 (85%) Strand = Plus / Minus Query: 2 caaaggagcttattatgcaatgaacataatcgatcttattgcaaaatcaatgtcttactt 61 |||||||||| |||||||||||| |||||| |||||| ||| || || |||||||||| Sbjct: 52584 caaaggagctcattatgcaatgaccataattgatctttttgagaagtcgatgtcttactc 52525 Query: 62 catagattcgagagaataggagaacagtagcctgacaaa 100 | |||||||||||||| | ||||| | |||||||||||| Sbjct: 52524 cgtagattcgagagaacaagagaaaaatagcctgacaaa 52486
>gb|AY819949.1| Persea thunbergii isolate 5 tRNA-Val (trnV) gene and trnV-trnM intergenic spacer, partial sequence; chloroplast Length = 675 Score = 246 bits (124), Expect = 7e-62 Identities = 387/472 (81%), Gaps = 17/472 (3%) Strand = Plus / Minus Query: 16 atgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcatagattcgagag 75 ||||||| |||| ||| |||||||||| ||||| |||||||||| ||| |||||||| | Sbjct: 460 atgcaatcaacagaattgatcttattgagaaatcgatgtcttactccatggattcgaggg 401 Query: 76 aataggagaacagtagcctgacaaacagtcggttcagtccgattcaggtgccaattcagg 135 || | ||||||| |||||||||||| | | |||| |||||||||||||||||||||||| Sbjct: 400 aacaagagaacaatagcctgacaaatattttgttcggtccgattcaggtgccaattcagg 341 Query: 136 tgcctaatcaaatagaaccctt-atggatttgctagttgataaggtaaatatccagccca 194 | || ||||||||||| | || | |||| | |||||||||| |||| |||| || Sbjct: 340 tacc-----aaatagaacccatcattggtttgatcattgataaggtgaatacccaggccc 286 Query: 195 ctaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaac 254 | |||||||||| |||||||||||||| |||| ||| ||| ||||||||| |||||||| Sbjct: 285 ttcaatgctaggcataatgaggataaggacctcaaaataacctcttttcgtcctatgaac 226 Query: 255 tttaaggtgtatgaagtctcatagttaactcttgcagtggaacgatagagactccatttc 314 ||||||||||||||||| ||||| || ||||||| | ||| |||||||||||||||| Sbjct: 225 tttaaggtgtatgaagtatcatatttgactcttggggcggattgatagagactccattta 166 Query: 315 acttaggttgatttaatttagaccagaggcagacctaagtcaaggtaatcctcctttgaa 374 |||||||||| || ||| || |||||||||||| |||| ||||| ||| ||||||| Sbjct: 165 acttaggttg-----atctaggccggaggcagacctacgtcagggtaacccttctttgaa 111 Query: 375 acactttggtattgctcctagatagatcataatacaaaaaatcaatcagagcacagggag 434 |||||||||||||||| ||||| ||| |||| ||| |||| ||||||| |||| Sbjct: 110 --actttggtattgctcc----cggatcagaattcaaataatgaatccgagcacatggag 57 Query: 435 ccatctcattatctttccgtaaagaaaaactatggtggactaactgatcttt 486 ||||||| ||||||| | || |||||||| |||||| ||||| | ||||||| Sbjct: 56 ccatctcgttatcttcctgtcaagaaaaaatatggtagactagccgatcttt 5
>gb|AY819938.1| Machilus kusanoi isolate 6 tRNA-Val (trnV) gene and trnV-trnM intergenic spacer, partial sequence; chloroplast Length = 684 Score = 244 bits (123), Expect = 3e-61 Identities = 386/472 (81%), Gaps = 15/472 (3%) Strand = Plus / Minus Query: 16 atgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcatagattcgagag 75 ||||||| |||| ||| |||||||||| ||||| |||||||||| ||| |||||||| | Sbjct: 462 atgcaatcaacagaattgatcttattgagaaatcgatgtcttactccatggattcgaggg 403 Query: 76 aataggagaacagtagcctgacaaacagtcggttcagtccgattcaggtgccaattcagg 135 || | ||||||| |||||||||||| | | |||| |||||||||||||||||||||||| Sbjct: 402 aacaagagaacaatagcctgacaaatattttgttcggtccgattcaggtgccaattcagg 343 Query: 136 tgcctaatcaaatagaaccctt-atggatttgctagttgataaggtaaatatccagccca 194 | || ||||||||||| | || | |||| | |||||||||| |||| |||| || Sbjct: 342 tacc-----aaatagaacccatcattggtttgatcattgataaggtgaatacccaggccc 288 Query: 195 ctaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaac 254 | |||||||||| |||||||||||||| |||| ||| ||| ||||||||| |||||||| Sbjct: 287 ttcaatgctaggcataatgaggataaggacctcaaaataacctcttttcgtcctatgaac 228 Query: 255 tttaaggtgtatgaagtctcatagttaactcttgcagtggaacgatagagactccatttc 314 ||||||||||||||||| ||||| || ||||||| | ||| |||||||||||||||| Sbjct: 227 tttaaggtgtatgaagtatcatatttgactcttggggcggattgatagagactccattta 168 Query: 315 acttaggttgatttaatttagaccagaggcagacctaagtcaaggtaatcctcctttgaa 374 |||||||||| || ||| || |||||||||||| |||| ||||| || ||||||| Sbjct: 167 acttaggttg-----atctaggccggaggcagacctacgtcagggtaacccctctttgaa 113 Query: 375 acactttggtattgctcctagatagatcataatacaaaaaatcaatcagagcacagggag 434 |||||||||||||||||| ||||| ||| |||| ||| |||| |||||| |||| Sbjct: 112 acactttggtattgctcc----cggatcagaattcaaataatgaatccaagcacatggag 57 Query: 435 ccatctcattatctttccgtaaagaaaaactatggtggactaactgatcttt 486 |||||| ||||||| | || |||||||| |||||| ||||| | ||||||| Sbjct: 56 gcatctcgttatcttcctgtcaagaaaaaatatggtagactagccgatcttt 5
>emb|AJ429667.1|CIL429667 Cassinopsis ilicifolia chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1496 Score = 240 bits (121), Expect = 4e-60 Identities = 342/414 (82%), Gaps = 13/414 (3%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| |||| |||| | | | |||||||||| ||||||| |||||| |||| || Sbjct: 416 ttgataaggtgaatacccagtctattcaatgctaggcataatgagtataaggacctcaaa 357 Query: 231 aaaacttcttttcgttctatgaactttaaggtgtatgaagtctcatagttaactcttgca 290 |||| ||||||||| ||||||||||||||||||||||||| ||||| || | | || | Sbjct: 356 aaaatctcttttcgtcctatgaactttaaggtgtatgaagtttcatattttatttttac- 298 Query: 291 gtggaacgatagagactccatttcacttaggttgatttaatttagaccagaggcagacct 350 | || ||||||||||| ||||| |||||||||||| | | |||||||||||||| Sbjct: 297 gcagagcgatagagacttcatttaacttaggttgatcga-----ggccagaggcagacct 243 Query: 351 aagtcaaggtaatcctcctttgaaacactttggtattgctcctagatagatcataataca 410 | |||||| ||| || |||| |||||||||||||| ||||||| ||| || ||| || Sbjct: 242 acgtcaagataacccccctt-gaaacactttggtagtgctcctggat----cagaatcca 188 Query: 411 aaaaatcaatcagagcacagggagccatctcattatctttccgtaaagaaaaactatggt 470 || ||| |||||||||||| ||||||||||| |||| |||| || |||||||| |||||| Sbjct: 187 aataatgaatcagagcacatggagccatctccttatttttctgtcaagaaaaaatatggt 128 Query: 471 ggactaactgatctttaaatcagtttatgaaagagcccaatgc--nnnnnnntgcatgtt 528 ||||| ||||| |||| ||||||| ||||||||||||||||| |||||||| Sbjct: 127 ggactggctgatatttatatcagttaatgaaagagcccaatgcaaaaaaaaatgcatgtt 68 Query: 529 gggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgtttta 582 ||||||||||||||||||| ||||||| ||||||||| ||||||||||||||| Sbjct: 67 gggtctttgaaacagttcagatcattttgataataataagtttgatctgtttta 14 Score = 48.1 bits (24), Expect = 0.032 Identities = 57/68 (83%) Strand = Plus / Minus Query: 33 gatcttattgcaaaatcaatgtcttacttcatagattcgagagaataggagaacagtagc 92 |||||||||| ||||| |||||||||| |||| || ||| ||| | ||||||| |||| Sbjct: 541 gatcttattgagaaatcgatgtcttactccataactttgagggaacaagagaacaatagc 482 Query: 93 ctgacaaa 100 |||||||| Sbjct: 481 ctgacaaa 474
>emb|AJ429638.1|HAS429638 Hydrangea aspera chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1477 Score = 236 bits (119), Expect = 7e-59 Identities = 341/415 (82%), Gaps = 13/415 (3%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| |||| |||| | | | |||||||||| ||||||| |||||| |||| || Sbjct: 418 ttgataaggtgaatacccagtctattcaatgctaggcataatgagtataaggacctcaaa 359 Query: 231 aaaacttcttttcgttctatgaactttaaggtgtatgaagtctcatagttaactcttgca 290 |||| ||||||||| ||||||||||||||||||||||||| ||||| || | | || | Sbjct: 358 aaaatctcttttcgtcctatgaactttaaggtgtatgaagtttcatatttgattttta-a 300 Query: 291 gtggaacgatagagactccatttcacttaggttgatttaatttagaccagaggcagacct 350 | || ||||||||||| ||||| |||||| ||||| || | |||||||||||||| Sbjct: 299 ggagagcgatagagacttcatttaacttagattgatcta-----ggccagaggcagacct 245 Query: 351 aagtcaaggtaatcctcctttgaaacactttggtattgctcctagatagatcataataca 410 | |||||| ||| || ||||||||||||||||| ||||||| ||| || ||| || Sbjct: 244 acgtcaagataacccctttttgaaacactttggtagtgctcctggat----cagaatcca 189 Query: 411 aaaaatcaatcagagcacagggagccatctcattatctttccgtaaagaaaaactatggt 470 || ||| |||||||||||| ||||||||||| ||||||||| || |||||||| ||||| Sbjct: 188 aataatgaatcagagcacatggagccatctccttatctttctgtcaagaaaaaatatggc 129 Query: 471 ggactaactgatctttaaatcagtttatgaaagagcccaatgc---nnnnnnntgcatgt 527 | |||||||||||||| ||||||| |||||||||||||||| ||||||| Sbjct: 128 gaactaactgatctttctatcagttactgaaagagcccaatgcaaaaaaaaaatgcatgt 69 Query: 528 tgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgtttta 582 ||||||||||||||||||| ||||||| |||||||||| ||||||||||||||| Sbjct: 68 tgggtctttgaaacagttcggatcattttgataataatcagtttgatctgtttta 14 Score = 42.1 bits (21), Expect = 2.0 Identities = 69/85 (81%) Strand = Plus / Minus Query: 16 atgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcatagattcgagag 75 ||||||| || | ||| |||||||||| ||||| |||||||||| |||| || || | Sbjct: 566 atgcaatcaaaagaattgatcttattgagaaatcgatgtcttactccataactttaaggg 507 Query: 76 aataggagaacagtagcctgacaaa 100 || | ||||||| |||||||||||| Sbjct: 506 aacaagagaacaatagcctgacaaa 482
>emb|AJ429636.1|CMA429636 Cornus mas chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1505 Score = 236 bits (119), Expect = 7e-59 Identities = 340/413 (82%), Gaps = 11/413 (2%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| |||| |||| | | | |||||||||| ||||||| |||||| |||| || Sbjct: 416 ttgataaggtgaatacccagtctattcaatgctaggcataatgagtataaggacctcaaa 357 Query: 231 aaaacttcttttcgttctatgaactttaaggtgtatgaagtctcatagttaactcttgca 290 |||| ||||||||| ||||||||||||||||||||||||| ||||| || | | || | Sbjct: 356 aaaatctcttttcgtcctatgaactttaaggtgtatgaagtttcatatttgattttta-a 298 Query: 291 gtggaacgatagagactccatttcacttaggttgatttaatttagaccagaggcagacct 350 | || ||||||||||| ||||| |||||| ||||| || | |||||||||||||| Sbjct: 297 gcagagcgatagagacttcatttaacttagattgatcta-----ggccagaggcagacct 243 Query: 351 aagtcaaggtaatcctcctttgaaacactttggtattgctcctagatagatcataataca 410 | |||||| ||| ||| ||||||||||||||||| ||||| | ||| || ||| | Sbjct: 242 acgtcaagataacccttttttgaaacactttggtagtgctcttggat----cagaatcaa 187 Query: 411 aaaaatcaatcagagcacagggagccatctcattatctttccgtaaagaaaaactatggt 470 || ||| |||||||||||| ||||||||||| ||||||||| || |||||||| ||||| Sbjct: 186 aataatgaatcagagcacatggagccatctccttatctttctgtcaagaaaaaatatggc 127 Query: 471 ggactaactgatctttaaatcagtttatgaaagagcccaatgc-nnnnnnntgcatgttg 529 ||||| ||||| |||| ||||||| ||||||||||||||||| ||||||||| Sbjct: 126 agactagctgatatttatatcagttaatgaaagagcccaatgcaaaaaaaatgcatgttg 67 Query: 530 ggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgtttta 582 ||||||||||||||||| ||||||| |||||||||| ||||||||||||||| Sbjct: 66 ggtctttgaaacagttcgtatcattttgataataatcagtttgatctgtttta 14 Score = 50.1 bits (25), Expect = 0.008 Identities = 70/85 (82%) Strand = Plus / Minus Query: 16 atgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcatagattcgagag 75 ||||||| || | ||| |||||||||| ||||| |||||||||| |||| || ||| | Sbjct: 564 atgcaatcaaaagaattgatcttattgagaaatcgatgtcttactccataactttgaggg 505 Query: 76 aataggagaacagtagcctgacaaa 100 || | ||||||| |||||||||||| Sbjct: 504 aacaagagaacaatagcctgacaaa 480
>emb|AJ429662.1|SSU429662 Schima superba chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1498 Score = 234 bits (118), Expect = 3e-58 Identities = 343/416 (82%), Gaps = 17/416 (4%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| |||| |||| | | | |||||||||| ||||||| |||||| |||| || Sbjct: 416 ttgataaggtgaatacccagtctattcaatgctaggcataatgagtataaggacctcaaa 357 Query: 231 aaaacttcttttcgttctatgaactttaaggtgtatgaagtctcatagttaactctt--g 288 |||| ||||||||| |||||||||||||||||||| |||| ||||| || | | || | Sbjct: 356 aaaatctcttttcgtcctatgaactttaaggtgtataaagtttcatatttgatttttagg 297 Query: 289 cagtggaacgatagagactccatttcacttaggttgatttaatttagaccagaggcagac 348 ||| | ||||||||||| |||| |||||||||||| || | |||||||||||| Sbjct: 296 cag---atcgatagagactttatttaacttaggttgatcta-----ggccagaggcagac 245 Query: 349 ctaagtcaaggtaatcctcctttgaaacactttggtattgctcctagatagatcataata 408 ||| |||||| ||| ||| ||||||||||||||||| ||||||| ||| || ||| Sbjct: 244 ctacgtcaagataaccctt-tttgaaacactttggtagtgctcctggat----caaaatc 190 Query: 409 caaaaaatcaatcagagcacagggagccatctcattatctttccgtaaagaaaaactatg 468 |||| ||| ||||||||||| |||||||||||| |||| ||| || |||||||| |||| Sbjct: 189 caaataatgaatcagagcacggggagccatctccttatttttatgtcaagaaaaaatatg 130 Query: 469 gtggactaactgatctttaaatcagtttatgaaagagcccaatgc--nnnnnnntgcatg 526 | |||||||||||| |||| ||||||| ||||||||||||||||| |||||| Sbjct: 129 gcggactaactgatatttatatcagttaatgaaagagcccaatgcaaaaaaaaatgcatg 70 Query: 527 ttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgtttta 582 ||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||| Sbjct: 69 ttgggtctttgaaacagttcagatcattttgataataatcagtttgatctgtttta 14 Score = 63.9 bits (32), Expect = 5e-07 Identities = 59/68 (86%) Strand = Plus / Minus Query: 33 gatcttattgcaaaatcaatgtcttacttcatagattcgagagaataggagaacagtagc 92 |||||||||| |||||| |||||||||| |||| || ||| ||| ||||||||| |||| Sbjct: 552 gatcttattgaaaaatcgatgtcttactccataactttgagggaacaggagaacaatagc 493 Query: 93 ctgacaaa 100 |||||||| Sbjct: 492 ctgacaaa 485
>emb|AJ429661.1|CSI429661 Camellia sinensis chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1479 Score = 234 bits (118), Expect = 3e-58 Identities = 342/416 (82%), Gaps = 16/416 (3%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| |||| |||| | | | |||||||||| ||||||| |||||| |||| || Sbjct: 417 ttgataaggtgaatacccagtctattcaatgctaggcataatgagtataaggacctcaaa 358 Query: 231 aaaacttcttttcgttctatgaactttaaggtgtatgaagtctcatagttaactctt--g 288 |||| ||||||||| |||||||||||||||||||| |||| ||||| || | | || | Sbjct: 357 aaaatctcttttcgtcctatgaactttaaggtgtataaagtttcatatttgatttttagg 298 Query: 289 cagtggaacgatagagactccatttcacttaggttgatttaatttagaccagaggcagac 348 ||| | ||||||||||| |||| |||||||||||| || | |||||||||||| Sbjct: 297 cag---atcgatagagactttatttaacttaggttgatcta-----ggccagaggcagac 246 Query: 349 ctaagtcaaggtaatcctcctttgaaacactttggtattgctcctagatagatcataata 408 ||| |||||| ||| ||| ||||||||||||||||| ||||||| ||| || ||| Sbjct: 245 ctacgtcaagataacccttttttgaaacactttggtagtgctcctggat----caaaatc 190 Query: 409 caaaaaatcaatcagagcacagggagccatctcattatctttccgtaaagaaaaactatg 468 |||| ||| ||||||||||| |||||||||||| |||| |||| || |||||||| |||| Sbjct: 189 caaataatgaatcagagcacggggagccatctccttatttttctgtcaagaaaaaatatg 130 Query: 469 gtggactaactgatctttaaatcagtttatgaaagagcccaatgc--nnnnnnntgcatg 526 | |||||||||||| |||| ||||||| ||||||||||||||||| |||| | Sbjct: 129 gcggactaactgatatttatatcagttaatgaaagagcccaatgcaaaaaaaaatgcacg 70 Query: 527 ttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgtttta 582 |||||||||||||||||||| ||||||| |||||||||| ||||||||||||||| Sbjct: 69 ttgggtctttgaaacagttcggatcattttgataataatcagtttgatctgtttta 14 Score = 46.1 bits (23), Expect = 0.13 Identities = 56/67 (83%) Strand = Plus / Minus Query: 34 atcttattgcaaaatcaatgtcttacttcatagattcgagagaataggagaacagtagcc 93 ||||||||| |||||||||| |||||| | || || ||| ||| | ||||||| ||||| Sbjct: 552 atcttattgaaaaatcaatgccttactccgtaactttgagggaacaagagaacaatagcc 493 Query: 94 tgacaaa 100 ||||||| Sbjct: 492 tgacaaa 486
>gb|AY819936.1| Machilus kusanoi isolate 4 tRNA-Val (trnV) gene and trnV-trnM intergenic spacer, partial sequence; chloroplast Length = 684 Score = 232 bits (117), Expect = 1e-57 Identities = 313/377 (83%), Gaps = 11/377 (2%) Strand = Plus / Minus Query: 16 atgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcatagattcgagag 75 ||||||| |||| ||| |||||||||| ||||| |||||||||| ||| |||||||| | Sbjct: 462 atgcaatcaacagaattgatcttattgagaaatcgatgtcttactccatggattcgaggg 403 Query: 76 aataggagaacagtagcctgacaaacagtcggttcagtccgattcaggtgccaattcagg 135 || | ||||||| |||||||||||| | | |||| |||||||||||||||||||||||| Sbjct: 402 aacaagagaacaatagcctgacaaatattttgttcggtccgattcaggtgccaattcagg 343 Query: 136 tgcctaatcaaatagaaccctt-atggatttgctagttgataaggtaaatatccagccca 194 | || ||||||||||| | || | |||| | |||||||||| |||| |||| || Sbjct: 342 tacc-----aaatagaacccatcattggtttgatcattgataaggtgaatacccaggccc 288 Query: 195 ctaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaac 254 | |||||||||| |||||||||||||| |||| ||| ||| ||||||||| |||||||| Sbjct: 287 ttcaatgctaggcataatgaggataaggacctcaaaataacctcttttcgtcctatgaac 228 Query: 255 tttaaggtgtatgaagtctcatagttaactcttgcagtggaacgatagagactccatttc 314 ||||||||| ||||||| ||||| || ||||||| | ||| |||||||||||||||| Sbjct: 227 tttaaggtggatgaagtatcatatttgactcttggggcggattgatagagactccattta 168 Query: 315 acttaggttgatttaatttagaccagaggcagacctaagtcaaggtaatcctcctttgaa 374 |||||||||| || ||| || |||||||||||| |||| ||||| ||| ||||||| Sbjct: 167 acttaggttg-----atctaggccggaggcagacctacgtcagggtaacccttctttgaa 113 Query: 375 acactttggtattgctc 391 ||||||||||||||||| Sbjct: 112 acactttggtattgctc 96
>gb|AY819939.1| Machilus kusanoi isolate 7 tRNA-Val (trnV) gene and trnV-trnM intergenic spacer, partial sequence; chloroplast Length = 684 Score = 228 bits (115), Expect = 2e-56 Identities = 384/472 (81%), Gaps = 15/472 (3%) Strand = Plus / Minus Query: 16 atgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcatagattcgagag 75 ||||||| |||| ||| |||||||||| ||||| |||||||||| ||| |||||||| | Sbjct: 462 atgcaatcaacagaattgatcttattgagaaatcgatgtcttactccatggattcgaggg 403 Query: 76 aataggagaacagtagcctgacaaacagtcggttcagtccgattcaggtgccaattcagg 135 || | ||||||| |||||||||||| | | |||| |||||||||||||||||||||||| Sbjct: 402 aacaagagaacaatagcctgacaaatattttgttcggtccgattcaggtgccaattcagg 343 Query: 136 tgcctaatcaaatagaaccctt-atggatttgctagttgataaggtaaatatccagccca 194 | || ||||||||||| | || | |||| | |||||||||| |||| |||| || Sbjct: 342 tacc-----aaatagaacccatcattggtttgatcattgataaggtgaatacccaggccc 288 Query: 195 ctaaatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaac 254 | |||||||||| |||||||||||||| |||| ||| ||| ||||||||| |||||||| Sbjct: 287 ttcaatgctaggcataatgaggataaggacctcaaaataacctcttttcgtcctatgaac 228 Query: 255 tttaaggtgtatgaagtctcatagttaactcttgcagtggaacgatagagactccatttc 314 ||||||||||||||||| ||||| || ||||||| | ||| |||||||||||||||| Sbjct: 227 tttaaggtgtatgaagtatcatatttgactcttggggcggattgatagagactccattta 168 Query: 315 acttaggttgatttaatttagaccagaggcagacctaagtcaaggtaatcctcctttgaa 374 ||||| |||| || ||| || |||||||||||| |||| ||||| ||| ||||||| Sbjct: 167 acttatgttg-----atctaggccggaggcagacctacgtcagggtaacccttctttgaa 113 Query: 375 acactttggtattgctcctagatagatcataatacaaaaaatcaatcagagcacagggag 434 |||| ||||||||| ||| ||||| ||| |||| ||| |||| |||||| |||| Sbjct: 112 acacattggtattgatcc----cggatcagaattcaaataatgaatccaagcacatggag 57 Query: 435 ccatctcattatctttccgtaaagaaaaactatggtggactaactgatcttt 486 |||||| ||||||| | || |||||||| |||||| ||||| | ||||||| Sbjct: 56 gcatctcgttatcttcctgtcaagaaaaaatatggtagactagccgatcttt 5
>emb|AJ429666.1|ADI429666 Apodytes dimidiata chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1515 Score = 228 bits (115), Expect = 2e-56 Identities = 340/415 (81%), Gaps = 13/415 (3%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| |||| |||| | | | |||||||||| ||||||| |||||| |||| || Sbjct: 418 ttgataaggtgaatacccagtctattcaatgctaggcataatgagtataaggacctcaaa 359 Query: 231 aaaacttcttttcgttctatgaactttaaggtgtatgaagtctcatagttaactcttgca 290 |||| |||||| || ||||||||||||||||||||||||| ||||| ||| || || | Sbjct: 358 aaaatctctttttgtcctatgaactttaaggtgtatgaagtttcatattta-ctttttaa 300 Query: 291 gtggaacgatagagactccatttcacttaggttgatttaatttagaccagaggcagacct 350 | || ||||||||||| ||||| |||||||||||| || | |||||||||||||| Sbjct: 299 gcagagcgatagagacttcatttaacttaggttgatcta-----ggccagaggcagacct 245 Query: 351 aagtcaaggtaatcctcctttgaaacactttggtattgctcctagatagatcataataca 410 | |||||| ||| || ||||||||||||||||| | || | || ||| || ||| || Sbjct: 244 acgtcaagataacccccctttgaaacactttggaaatgtttctggat----cagaatcca 189 Query: 411 aaaaatcaatcagagcacagggagccatctcattatctttccgtaaagaaaaactatggt 470 || ||| ||||||| |||| ||||||||| | |||| |||| || |||||||| ||||| Sbjct: 188 aataatgaatcagaacacatggagccatccccttatttttctgtcaagaaaaaatatggc 129 Query: 471 ggactaactgatctttaaatcagtttatgaaagagcccaatgcnnnnnnn---tgcatgt 527 |||||||||||| |||| ||||||| ||| ||||||||||||| ||||||| Sbjct: 128 ggactaactgatatttatatcagttaatggaagagcccaatgcaaaaaaaaaatgcatgt 69 Query: 528 tgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgtttta 582 |||||||||||||||||||| ||||||| |||||||||| ||||||||||||||| Sbjct: 68 tgggtctttgaaacagttcagatcattttgataataatcagtttgatctgtttta 14
>emb|AJ429719.1|GLI429719 Griselinia littoralis chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1486 Score = 226 bits (114), Expect = 6e-56 Identities = 339/412 (82%), Gaps = 12/412 (2%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| |||| |||| | | | |||||||||| ||||||| |||||| |||| || Sbjct: 413 ttgataaggtgaatacccagtctattcaatgctaggcataatgagtataaggacctcaaa 354 Query: 231 aaaacttcttttcgttctatgaactttaaggtgtatgaagtctcatagttaactcttgca 290 |||| ||||||||| ||||||||||||||||||||||||| ||||| || | | || | Sbjct: 353 aaaatctcttttcgtcctatgaactttaaggtgtatgaagtttcatattttattttta-a 295 Query: 291 gtggaacgatagagactccatttcacttaggttgatttaatttagaccagaggcagacct 350 | || ||||||||||| ||| | ||||||||| ||| ||| |||||||||||||| Sbjct: 294 gcagagcgatagagacttcatgtaacttaggtt-----aatctaggccagaggcagacct 240 Query: 351 aagtcaaggtaatcctcctttgaaacactttggtattgctcctagatagatcataataca 410 | |||||| ||| || ||||||||||||||||||| || ||| | ||||| ||| || Sbjct: 239 acgtcaagataa-ccccctttgaaacactttggtagtgttcc----tggatcagaattca 185 Query: 411 aaaaatcaatcagagcacagggagccatctcattatctttccgtaaagaaaaactatggt 470 || ||| | |||||||||| ||||||||||| |||| |||| ||||| ||||| |||| Sbjct: 184 aataatgactcagagcacatggagccatctccttatttttctgtaaa-aaaaaagatggc 126 Query: 471 ggactaactgatctttaaatcagtttatgaaagagcccaatgcnnnnnnntgcatgttgg 530 ||||| ||||| |||| ||||||| ||||||||||||||||| |||||||||| Sbjct: 125 ggactggctgatatttatatcagttaatgaaagagcccaatgcacaaaaatgcatgttgg 66 Query: 531 gtctttgaaacagttcaaatcatttcgataataatccgtttgatctgtttta 582 ||||||||||||||||| ||||||| ||||||||| ||||||||||||||| Sbjct: 65 gtctttgaaacagttcagatcattttgataataataagtttgatctgtttta 14 Score = 42.1 bits (21), Expect = 2.0 Identities = 69/85 (81%) Strand = Plus / Minus Query: 16 atgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcatagattcgagag 75 ||||||| || | ||| |||| ||||| ||||| |||||||||| |||| || ||| | Sbjct: 561 atgcaatcaaaagaattgatcctattgagaaatcgatgtcttactccataactttgaggg 502 Query: 76 aataggagaacagtagcctgacaaa 100 || | ||||||| |||||||||||| Sbjct: 501 aacaagagaacaatagcctgacaaa 477
>emb|AJ429712.1|QVE429712 Quintinia verdonii chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1516 Score = 220 bits (111), Expect = 4e-54 Identities = 339/413 (82%), Gaps = 12/413 (2%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| |||| |||| | | | |||||||||| ||||||| |||||| |||| || Sbjct: 415 ttgataaggtgaatacccagtctattcaatgctaggcataatgagtataaggacctcaaa 356 Query: 231 aaaacttcttttcgttctatgaactttaaggtgtatgaagtctcatagttaactcttgca 290 |||| ||||||||| ||||||||||||||||||||||||| ||||| || | | || | Sbjct: 355 aaaatatcttttcgtcctatgaactttaaggtgtatgaagtttcatatttgattttta-a 297 Query: 291 gtggaacgatagagactccatttcacttaggttgatttaatttagaccagaggcagacct 350 | || ||||||||||| |||| ||||||||| ||| ||| |||||||||||||| Sbjct: 296 gcagagcgatagagactttatttaacttaggtt-----aatctaggccagaggcagacct 242 Query: 351 aagtcaaggtaatcctcctttgaaacactttggtattgctcctagatagatcataataca 410 | |||||| ||| || ||||||||||||||||||| || ||| | ||||| ||| || Sbjct: 241 acgtcaagataa-ccccctttgaaacactttggtagtgttcc----tggatcagaatcca 187 Query: 411 aaaaatcaatcagagcacagggagccatctcattatctttccgtaaagaaaaactatggt 470 || ||| | |||||||||| ||||||||||| |||| |||| || || ||||| ||||| Sbjct: 186 aataatgactcagagcacatggagccatctccttatttttctgtcaaaaaaaaatatggc 127 Query: 471 ggactaactgatctttaaatcagtttatgaaagagcccaatgc-nnnnnnntgcatgttg 529 ||||| ||||| |||| ||||||| ||||||||||||||||| ||||||||| Sbjct: 126 ggactggctgatatttatatcagttaatgaaagagcccaatgcacaaaaaatgcatgttg 67 Query: 530 ggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgtttta 582 ||||||||||| |||||| ||||||| |||||||||| ||||||||||||||| Sbjct: 66 ggtctttgaaagagttcagatcattttgataataatcagtttgatctgtttta 14 Score = 54.0 bits (27), Expect = 5e-04 Identities = 100/124 (80%), Gaps = 4/124 (3%) Strand = Plus / Minus Query: 16 atgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcatagattcgagag 75 ||||||| || | ||| |||||||||| ||||| |||||||||| |||| || ||| | Sbjct: 563 atgcaatcaaaagaattgatcttattgataaatcgatgtcttactccataactttgaggg 504 Query: 76 aataggagaacagtagcctgacaaacagtcggttcagtccgattcaggtgccaattcagg 135 || | ||||||| |||||||||||| ||||| ||||||||| |||||| ||| ||| Sbjct: 503 aacaagagaacaatagcctgacaaa----aggttcggtccgattcgggtgcccatttagg 448 Query: 136 tgcc 139 |||| Sbjct: 447 tgcc 444
>emb|AJ429671.1|VCA429671 Vahlia capensis chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1503 Score = 216 bits (109), Expect = 6e-53 Identities = 324/394 (82%), Gaps = 18/394 (4%) Strand = Plus / Minus Query: 198 aatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaacttt 257 |||||||||| ||||||| |||||| |||| |||||| ||||||||| ||||||||||| Sbjct: 398 aatgctaggcataatgagtataaggacctcaaaaaaatctcttttcgtcctatgaacttt 339 Query: 258 aaggtgtatgaagtctcatagttaactcttgcagtggaacgatagagactccatttcact 317 |||||||||||||| ||||| || | | || || |||||||||||||| ||||| ||| Sbjct: 338 aaggtgtatgaagtttcatattttattttttaagcagaacgatagagacttcatttaact 279 Query: 318 taggttgatttaatttagaccagaggcagacctaagtcaaggtaatcctc-ctttgaaac 376 ||||||||| || | ||||||||||||||| |||||| ||| || ||||||||| Sbjct: 278 taggttgatcta-----ggccagaggcagacctacgtcaagataaccccgactttgaaac 224 Query: 377 actttggtattgctcctagatagatcataat-acaaaaaatcaatcagagcacagggagc 435 ||||||||| ||||||| ||| || ||| ||||| ||| |||||||||||| ||||| Sbjct: 223 actttggtagtgctcctggat----cagaatcacaaataatgaatcagagcacatggagc 168 Query: 436 catctcattatctt-----tccgtaaagaaaaactatggtggactaactgatctttaaat 490 |||||| ||||||| || || |||||||| ||||| |||| ||||| |||| || Sbjct: 167 catctccttatcttatttttctgtcaagaaaaaatatggcagactggctgatatttatat 108 Query: 491 cagtttatgaaagagcccaatgcnnnnnnn--tgcatgttgggtctttgaaacagttcaa 548 ||||| ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 107 cagttaatgaaagagcccaatgcaaaaaaaaatgcatgttgggtctttgaaacagttcag 48 Query: 549 atcatttcgataataatccgtttgatctgtttta 582 ||||||| |||||||||| ||||||||||||||| Sbjct: 47 atcattttgataataatcagtttgatctgtttta 14
>emb|AJ429740.1|LBO429740 Linnaea borealis chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1510 Score = 214 bits (108), Expect = 2e-52 Identities = 339/413 (82%), Gaps = 14/413 (3%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| |||| |||| | | | |||||||||| ||||||| ||||||||||| || Sbjct: 413 ttgataaggtgaatacccagtctattcaatgctaggcataatgagtataagggcctc-aa 355 Query: 231 aaaacttcttttcgttctatgaactttaaggtgtatgaagtctcatagttaactcttgca 290 |||| ||||||||| ||||||||||||||||||||||||| ||||| || || || | Sbjct: 354 aaaatatcttttcgtcctatgaactttaaggtgtatgaagtttcata-ttttctttttaa 296 Query: 291 gtggaacgatagagactccatttcacttaggttgatttaatttagaccagaggcagacct 350 || || || |||||||| ||||| ||||||| ||||| ||| |||||||||||||| Sbjct: 295 gtagagcggtagagacttcatttaacttagg-----ttaatctaggccagaggcagacct 241 Query: 351 aagtcaaggtaatcctcctttgaaacactttggtattgctcctagatagatcataataca 410 | |||||| ||| |||| |||||||||||||||||||| |||| | ||| ||| || Sbjct: 240 acgtcaagataa-cctcttttgaaacactttggtattgttcct-----ggtcagaatcca 187 Query: 411 aaaaatcaatcagagcacagggagccatctcattatctttccgtaaagaaaaactatggt 470 || ||| | ||||||| | ||||||||||| |||| |||| || || ||||| ||||| Sbjct: 186 aataatgacccagagcaaatggagccatctccttatttttctgtcaaaaaaaaatatggc 127 Query: 471 ggactaactgatctttaaatcagtttatgaaagagcccaatgc-nnnnnnntgcatgttg 529 ||||| ||||| |||| ||||||| ||||||||||||||||| ||||||||| Sbjct: 126 ggactggctgatatttatatcagttaatgaaagagcccaatgcaaaaaaaatgcatgttg 67 Query: 530 ggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgtttta 582 |||||||||||||||||| ||||||| ||||||||| ||||||||||||||| Sbjct: 66 ggtctttgaaacagttcagatcattttgataataataagtttgatctgtttta 14 Score = 58.0 bits (29), Expect = 3e-05 Identities = 71/85 (83%) Strand = Plus / Minus Query: 16 atgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcatagattcgagag 75 ||||||| || | ||| |||||||||| |||||||||||||||| |||| || ||| | Sbjct: 560 atgcaatcaaaagaattgatcttattgagaaatcaatgtcttactccataactttgaggg 501 Query: 76 aataggagaacagtagcctgacaaa 100 || | ||||||| |||||||||||| Sbjct: 500 aacaagagaacaatagcctgacaaa 476
>emb|AJ429718.1|API429718 Aralidium pinnatifidum chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1485 Score = 214 bits (108), Expect = 2e-52 Identities = 317/386 (82%), Gaps = 11/386 (2%) Strand = Plus / Minus Query: 198 aatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaacttt 257 |||||||||| ||||||| |||||| |||| |||||| ||||||||| ||||||||||| Sbjct: 389 aatgctaggcataatgagtataaggacctcaaaaaaatatcttttcgtcctatgaacttt 330 Query: 258 aaggtgtatgaagtctcatagttaactcttgcagtggaacgatagagactccatttcact 317 |||||||||||||| ||||| || | | || || || ||||||||||| ||| | ||| Sbjct: 329 aaggtgtatgaagtttcatattttattttta-agcagagcgatagagacttcatgtaact 271 Query: 318 taggttgatttaatttagaccagaggcagacctaagtcaaggtaatcctcctttgaaaca 377 |||||| ||| ||| ||||||||||||||| |||||| ||| || ||||||||||| Sbjct: 270 taggtt-----aatctaggccagaggcagacctacgtcaagataacccccctttgaaaca 216 Query: 378 ctttggtattgctcctagatagatcataatacaaaaaatcaatcagagcacagggagcca 437 |||||||| || ||| | ||||| ||| |||| ||| | |||||||||| ||||||| Sbjct: 215 ctttggtagtgttcc----tggatcagaattcaaataatgactcagagcacatggagcca 160 Query: 438 tctcattatctttccgtaaagaaaaactatggtggactaactgatctttaaatcagttta 497 |||| |||| |||| || || ||||| ||||| ||||| ||||| ||| ||||||| | Sbjct: 159 tctccttatttttctgtcaaaaaaaaatatggcggactggctgatatttttatcagttaa 100 Query: 498 tgaaagagcccaatgc-nnnnnnntgcatgttgggtctttgaaacagttcaaatcatttc 556 |||||||||||||||| ||||||||||||||||||||||||||| ||||||| Sbjct: 99 tgaaagagcccaatgcacaaaaaatgcatgttgggtctttgaaacagttcagatcatttt 40 Query: 557 gataataatccgtttgatctgtttta 582 ||||||||| ||||||||||||||| Sbjct: 39 gataataataagtttgatctgtttta 14 Score = 50.1 bits (25), Expect = 0.008 Identities = 70/85 (82%) Strand = Plus / Minus Query: 16 atgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcatagattcgagag 75 ||||||| || | ||| |||||||||| ||||| |||||||||| |||| || ||| | Sbjct: 565 atgcaatcaaaagaattgatcttattgagaaatcgatgtcttactccataactttgaggg 506 Query: 76 aataggagaacagtagcctgacaaa 100 || | ||||||| |||||||||||| Sbjct: 505 aacaagagaacaatagcctgacaaa 481
>emb|AJ429713.1|PAL429713 Paracryphia alticola chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1522 Score = 214 bits (108), Expect = 2e-52 Identities = 339/413 (82%), Gaps = 13/413 (3%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| |||| |||| | | | |||||||||| ||||||| |||||| |||| || Sbjct: 414 ttgataaggtgaatacccagtctattcaatgctaggcataatgagtataaggacctcaaa 355 Query: 231 aaaacttcttttcgttctatgaactttaaggtgtatgaagtctcatagttaactcttgca 290 |||| ||||||||| ||||||||||||||||||||||||| ||||| || | | || | Sbjct: 354 aaaatctcttttcgtcctatgaactttaaggtgtatgaagtttcatatttgattttta-a 296 Query: 291 gtggaacgatagagactccatttcacttaggttgatttaatttagaccagaggcagacct 350 | || ||||||||||| ||||| ||||||| ||||| ||| ||| |||||||||| Sbjct: 295 gcagagcgatagagacttcatttaacttagg-----ttaatctaggccaaaggcagacct 241 Query: 351 aagtcaaggtaatcctcctttgaaacactttggtattgctcctagatagatcataataca 410 | |||||| ||| || ||||||||||||||||||| || ||| | ||||| ||| || Sbjct: 240 acgtcaagataa-ccccctttgaaacactttggtagtgttcc----tggatcagaatcca 186 Query: 411 aaaaatcaatcagagcacagggagccatctcattatctttccgtaaagaaaaactatggt 470 || ||| | |||||||||| ||||||||||| |||| |||| || || ||||| ||||| Sbjct: 185 aataatgactcagagcacatggagccatctccttatttttctgtcaa-aaaaagtatggc 127 Query: 471 ggactaactgatctttaaatcagtttatgaaagagcccaatgc-nnnnnnntgcatgttg 529 ||||| ||||| |||| ||||||| ||||||||||||||||| ||||||||| Sbjct: 126 ggactggctgatatttatatcagttaatgaaagagcccaatgcacaaaaaatgcatgttg 67 Query: 530 ggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgtttta 582 |||||||||||||||||| ||||||| ||||||||| ||||||||||||||| Sbjct: 66 ggtctttgaaacagttcagatcatttngataataataagtttgatctgtttta 14 Score = 50.1 bits (25), Expect = 0.008 Identities = 70/85 (82%) Strand = Plus / Minus Query: 16 atgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcatagattcgagag 75 ||||||| || | ||| |||||||||| ||||| |||||||||| |||| || ||| | Sbjct: 562 atgcaatcaaaagaattgatcttattgagaaatcgatgtcttactccataactttgaggg 503 Query: 76 aataggagaacagtagcctgacaaa 100 || | ||||||| |||||||||||| Sbjct: 502 aacaagagaacaatagcctgacaaa 478
>emb|AJ429739.1|DSA429739 Dipsacus sativus chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1517 Score = 208 bits (105), Expect = 1e-50 Identities = 336/410 (81%), Gaps = 14/410 (3%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| |||| |||| | | | |||||||||| ||||||| ||||||||||| || Sbjct: 409 ttgataaggtgaatacccagtctattcaatgctaggcttaatgagtataagggcctcaaa 350 Query: 231 aaaacttcttttcgttctatgaactttaaggtgtatgaagtctcatagttaactcttgca 290 ||| ||| ||||||| ||||||||||||||||||||||||| ||||| || || || | Sbjct: 349 aaatctt-ttttcgtcctatgaactttaaggtgtatgaagtttcatatttt-ctttttaa 292 Query: 291 gtggaacgatagagactccatttcacttaggttgatttaatttagaccagaggcagacct 350 || || || |||||||| ||||||||||||||| ||| ||| |||||||||||||| Sbjct: 291 gtagagcgttagagacttcatttcacttaggtt-----aatctaggccagaggcagacct 237 Query: 351 aagtcaaggtaatcctcctttgaaacactttggtattgctcctagatagatcataataca 410 | |||||| ||| || |||||||||||||||||||||| |||| | ||| ||| || Sbjct: 236 acgtcaagctaaccc-cctttgaaacactttggtattgttcctgg-----tcagaatcca 183 Query: 411 aaaaatcaatcagagcacagggagccatctcattatctttccgtaaagaaaaactatggt 470 | ||| | ||||||||| ||||||||||| |||| |||| || || ||||| ||||| Sbjct: 182 actaatgacccagagcacatggagccatctccttatttttctgtcaaaaaaaa-tatggc 124 Query: 471 ggactaactgatctttaaatcagtttatgaaagagcccaatgcnnnnnnntgcatgttgg 530 ||||| ||||| ||| ||||||| ||||||||||||||||| |||||||||| Sbjct: 123 ggactggctgatatttctatcagttaatgaaagagcccaatgcaaaaaaatgcatgttgg 64 Query: 531 gtctttgaaacagttcaaatcatttcgataataatccgtttgatctgttt 580 ||||||||||||||||| ||||||| |||||||| ||||||||||||| Sbjct: 63 gtctttgaaacagttcagatcattttgataataagaagtttgatctgttt 14
>emb|AJ429648.1|PEU429648 Pentaphylax euryoides chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1477 Score = 206 bits (104), Expect = 6e-50 Identities = 316/386 (81%), Gaps = 11/386 (2%) Strand = Plus / Minus Query: 198 aatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaacttt 257 |||||||||| ||||||| |||||| ||| |||||| ||||||||| ||||||||||| Sbjct: 389 aatgctaggcataatgagtataaggatctcaaaaaaatatcttttcgtcctatgaacttt 330 Query: 258 aaggtgtatgaagtctcatagttaactcttgcagtggaacgatagagactccatttcact 317 ||||||||| |||| ||||| || | | || | ||||||||||||||| |||| ||| Sbjct: 329 aaggtgtataaagtttcatattttatttttag-gaggaacgatagagactttatttaact 271 Query: 318 taggttgatttaatttagaccagaggcagacctaagtcaaggtaatcctcctttgaaaca 377 |||||| ||| ||| ||||||||||||||| |||||| ||| ||| ||||||||| Sbjct: 270 taggtt-----aatctaggccagaggcagacctacgtcaagataacccttttttgaaaca 216 Query: 378 ctttggtattgctcctagatagatcataatacaaaaaatcaatcagagcacagggagcca 437 |||||||| ||||||| ||| || || |||| ||| ||||||||||| |||||||| Sbjct: 215 ctttggtagtgctcctggat----caaaacccaaataatgaatcagagcacggggagcca 160 Query: 438 tctcattatctttccgtaaagaaaaactatggtggactaactgatctttaaatcagttta 497 |||| |||| |||| || |||||||| ||||| ||||| ||||| ||| ||||||| | Sbjct: 159 tctccttatttttctgtcaagaaaaaatatggcggactggctgatatttctatcagttaa 100 Query: 498 tgaaagagcccaatgc-nnnnnnntgcatgttgggtctttgaaacagttcaaatcatttc 556 |||||||||||||||| |||||||||||||||||||||||||| ||||||| Sbjct: 99 tgaaagagcccaatgcaaaaaaaatgcatgttgggtctttgaaacagttcggatcatttt 40 Query: 557 gataataatccgtttgatctgtttta 582 ||||||||| ||||||||||||||| Sbjct: 39 gataataatgagtttgatctgtttta 14 Score = 50.1 bits (25), Expect = 0.008 Identities = 70/85 (82%) Strand = Plus / Minus Query: 16 atgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcatagattcgagag 75 ||||||| || | ||| |||||||||| |||||| |||||||||| ||| || ||| | Sbjct: 560 atgcaatcaaaagaattgatcttattgaaaaatcgatgtcttactctataattttgaggg 501 Query: 76 aataggagaacagtagcctgacaaa 100 || | ||||||| |||||||||||| Sbjct: 500 aacaagagaacaatagcctgacaaa 476
>emb|AJ429741.1|MLO429741 Morina longifolia chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1506 Score = 204 bits (103), Expect = 2e-49 Identities = 336/412 (81%), Gaps = 13/412 (3%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| |||| |||| | | | |||||||||| ||||||| ||||||||||| || Sbjct: 412 ttgataaggtgaatacccagtctattcaatgctaggcttaatgagtataagggcctc-aa 354 Query: 231 aaaacttcttttcgttctatgaactttaaggtgtatgaagtctcatagttaactcttgca 290 |||| ||||||||| ||||||||||||||||||||||||| ||||| || || || | Sbjct: 353 aaaagatcttttcgtcctatgaactttaaggtgtatgaagtttcatatttt-ctttttaa 295 Query: 291 gtggaacgatagagactccatttcacttaggttgatttaatttagaccagaggcagacct 350 || || || |||||||| ||||| |||||| |||||| ||| |||||||||||||| Sbjct: 294 gtagagcggtagagacttcatttaacttag-----tttaatctaggccagaggcagacct 240 Query: 351 aagtcaaggtaatcctcctttgaaacactttggtattgctcctagatagatcataataca 410 | |||||| ||| || | |||||||||||||||||||| |||| | ||| ||| | Sbjct: 239 acgtcaagataaccc-cttttgaaacactttggtattgttcctgg-----tcagaatccc 186 Query: 411 aaaaatcaatcagagcacagggagccatctcattatctttccgtaaagaaaaactatggt 470 || ||| | ||||||||| ||||||||||| |||| ||| || || ||||| ||||| Sbjct: 185 aataatgacccagagcacatggagccatctccttatttttatgtcaaaaaaaaatatggc 126 Query: 471 ggactaactgatctttaaatcagtttatgaaagagcccaatgcnnnnnnntgcatgttgg 530 ||||| ||||| |||| ||||||| ||||||||||||||||| |||||||||| Sbjct: 125 ggactggctgatatttatatcagttaatgaaagagcccaatgcaaaaaaatgcatgttgg 66 Query: 531 gtctttgaaacagttcaaatcatttcgataataatccgtttgatctgtttta 582 ||||||||||||||||| ||||||| |||||||| ||||||||||||||| Sbjct: 65 gtctttgaaacagttcagatcattttgataataagaagtttgatctgtttta 14
>emb|AJ429721.1|TTI429721 Torricellia tiliaefolia chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1476 Score = 198 bits (100), Expect = 1e-47 Identities = 317/387 (81%), Gaps = 13/387 (3%) Strand = Plus / Minus Query: 198 aatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaacttt 257 |||||||||| ||||||| |||||| |||| |||||| ||||||||| ||||||||||| Sbjct: 389 aatgctaggcataatgagtataaggacctcaaaaaaatctcttttcgtcctatgaacttt 330 Query: 258 aaggtgtatgaagtctcatagttaactcttgcagtggaacgatagagactccatttcact 317 |||||||||||||| ||||| || | | || || |||||||||||||| ||| | ||| Sbjct: 329 aaggtgtatgaagtttcatattttattttta-agcagaacgatagagacttcatgtaact 271 Query: 318 taggttgatttaatttagaccagaggcagacctaagtcaaggtaatcctcctttgaaaca 377 |||||| ||| ||| ||||||||||||||| |||||| ||| || ||||||||||| Sbjct: 270 taggtt-----aatctaggccagaggcagacctacgtcaagataa-ccccctttgaaaca 217 Query: 378 ctttggtattgctcctagatagatcataatacaaaaaatcaatcagagcacagggagcca 437 |||||||| || ||| | ||||| ||| |||| ||| | |||||||||| ||||||| Sbjct: 216 ctttggtagtgttcc----tggatcagaattcaaataatgactcagagcacatggagcca 161 Query: 438 tctcattatctttccgt-aaagaaaaactatggtggactaactgatctttaaatcagttt 496 |||| |||| |||| || ||| ||||| ||||| ||||| ||||| ||| ||||||| Sbjct: 160 tctccttatttttctgtcaaaaaaaaaatatggcggactggctgatatttttatcagtta 101 Query: 497 atgaaagagcccaatgc-nnnnnnntgcatgttgggtctttgaaacagttcaaatcattt 555 ||||||||||||||||| ||||||||||||||||||||||||||| ||||||| Sbjct: 100 atgaaagagcccaatgcacaaaaaatgcatgttgggtctttgaaacagttcagatcattt 41 Query: 556 cgataataatccgtttgatctgtttta 582 |||||| | ||||||||||||||| Sbjct: 40 tgataatnannagtttgatctgtttta 14 Score = 50.1 bits (25), Expect = 0.008 Identities = 70/85 (82%) Strand = Plus / Minus Query: 16 atgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcatagattcgagag 75 ||||||| || | ||| |||||||||| ||||| |||||||||| |||| || ||| | Sbjct: 563 atgcaatcaaaagaattgatcttattgagaaatcgatgtcttactccataactttgaggg 504 Query: 76 aataggagaacagtagcctgacaaa 100 || | ||||||| |||||||||||| Sbjct: 503 aacaagagaacaatagcctgacaaa 479
>emb|AJ429736.1|VRH429736 Viburnum rhytidophyllum chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1495 Score = 192 bits (97), Expect = 9e-46 Identities = 307/375 (81%), Gaps = 12/375 (3%) Strand = Plus / Minus Query: 209 taatgaggataagggcctccaaaaaacttcttttcgttctatgaactttaaggtgtatga 268 ||||||| |||||| |||| |||||| ||||||||| |||||||||||||||||||||| Sbjct: 377 taatgagtataaggacctcaaaaaaatctcttttcgtcctatgaactttaaggtgtatga 318 Query: 269 agtctcatagttaactcttgcagtggaacgatagagactccatttcacttaggttgattt 328 ||| ||||| || | | || || || ||||||||||| ||||| ||||||||| Sbjct: 317 agtttcatatttgattttta-agcagagcgatagagacttcatttaacttaggtt----- 264 Query: 329 aatttagaccagaggcagacctaagtcaaggtaatcctcctttgaaacactttggtattg 388 ||| ||| ||| ||||| ||||| |||||| ||| || ||||||||||||||||||| || Sbjct: 263 aatctaggccataggcatacctacgtcaagataagcc-cctttgaaacactttggtagtg 205 Query: 389 ctcctagatagatcataatacaaaaaatcaatcagagcacagggagccatctcattatct 448 |||| ||| | ||| |||| ||| | |||||||||| ||||||||||| |||| | Sbjct: 204 ttcctggat----ctgaatccaaataatgactcagagcacacggagccatctctttattt 149 Query: 449 ttccgtaaagaaaaactatggtggactaactgatctttaaatcagtttatgaaagagccc 508 ||| || || ||||| ||||| |||||| ||||| |||| ||||||| |||||||||||| Sbjct: 148 ttctgtcaaaaaaaaatatggcggactagctgatatttatatcagttaatgaaagagccc 89 Query: 509 aatgcnnnnnnn-tgcatgttgggtctttgaaacagttcaaatcatttcgataataatcc 567 | ||| ||||||||||||||||||||||||||| ||||||| |||||||||| Sbjct: 88 agtgcacaaaaaatgcatgttgggtctttgaaacagttcagatcattttgataataatca 29 Query: 568 gtttgatctgtttta 582 ||||||||||||||| Sbjct: 28 gtttgatctgtttta 14
>emb|AJ429728.1|ATR429728 Acicarpha tribuloides chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1489 Score = 192 bits (97), Expect = 9e-46 Identities = 339/415 (81%), Gaps = 14/415 (3%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| ||||||||| | | | |||||||||| ||||||| |||||| |||| || Sbjct: 417 ttgataaggtgaatatccagtctattcaatgctaggcataatgagtataaggacctcaaa 358 Query: 231 aaaacttcttttcgttctatgaactttaaggtgtatgaagtctcatagttaactcttgca 290 |||| ||||||||| ||||||||||||||||||||||||| ||||| || | | || | Sbjct: 357 aaaatctcttttcgtcctatgaactttaaggtgtatgaagtttcatatttga-tttttaa 299 Query: 291 gtggaacgatagagactccatttcacttaggttgatttaatttagaccagaggcagacct 350 || | ||||||||||| ||||||||||||| ||||| ||| |||||||||||||| Sbjct: 298 gtaaagcgatagagacttcatttcacttagg-----ttaatctaggccagaggcagacct 244 Query: 351 aagtcaaggtaatcctcctttgaaacactttggtattgctcctagatagatcataataca 410 | |||||| ||| || || |||||| ||||||||| || |||| || ||| ||| || Sbjct: 243 acgtcaagataa-ccccccttgaaaaactttggtagtgttcct-ga---atctgaatcca 189 Query: 411 aaaaatcaatcagagcacagggagccatctcattatctttccgt--aaagaaaaactatg 468 | ||| | |||||||||| |||||||||| |||| |||| || ||| ||||| ||| Sbjct: 188 cataatgactcagagcacatggagccatctacttatttttctgtcaaaaaaaaaaaaatg 129 Query: 469 gtggactaactgatctttaaatcagtttatgaaagagcccaatgc-nnnnnnntgcatgt 527 | |||||| ||||| |||| ||||||| ||||||||||||||||| ||||||| Sbjct: 128 gcggactagctgatatttatatcagttaatgaaagagcccaatgcacaaaaaatgcatgt 69 Query: 528 tgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgtttta 582 |||||||||||||||||||| ||||||| ||||||||| ||||||||||||||| Sbjct: 68 tgggtctttgaaacagttcagatcattttgataataataagtttgatctgtttta 14
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 188 bits (95), Expect = 1e-44 Identities = 202/239 (84%), Gaps = 7/239 (2%) Strand = Plus / Minus Query: 344 cagacctaagtcaaggtaatcctcctttgaaacactttggtattgctcctagatagatca 403 |||||||| |||||||||||||| |||||||||||||||||||||||| ||| || Sbjct: 56394 cagacctacgtcaaggtaatcct---ttgaaacactttggtattgctcctggat----ca 56342 Query: 404 taatacaaaaaatcaatcagagcacagggagccatctcattatctttccgtaaagaaaaa 463 |||| ||| || |||||||||||| ||||||||||| ||||||| |||||| ||| Sbjct: 56341 gaatataaataaagaatcagagcacatggagccatctcgttatcttcatataaagataaa 56282 Query: 464 ctatggtggactaactgatctttaaatcagtttatgaaagagcccaatgcnnnnnnntgc 523 |||||||||||||||||| | ||||||| ||||||||||||||||| ||| Sbjct: 56281 atatggtggactaactgattgatccatcagttgatgaaagagcccaatgcacaaaaatgc 56222 Query: 524 atgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgtttta 582 ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| Sbjct: 56221 atgttgggtctttgaaacagttcgaatcatttcgataataatcagtttgatctgtttta 56163 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 51 atgtcttacttcatagattcgagagaataggagaacagtagcctgacaa 99 |||||||||| ||| |||||||||||| | ||||||| ||||||||||| Sbjct: 56674 atgtcttactccattgattcgagagaacaagagaacaatagcctgacaa 56626 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 240 tttcgttctatgaactttaaggtgtatgaagtctcatagttaactcttgcagtggaacga 299 |||||| ||||||||||| ||||||||||||| ||||| || || |||| || ||||||| Sbjct: 56488 tttcgtcctatgaactttgaggtgtatgaagtatcatattttacgcttgaagcggaacga 56429 Query: 300 tagagactc 308 || ||||| Sbjct: 56428 cagggactc 56420
>emb|AJ429731.1|MTR429731 Menyanthes trifoliata chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1507 Score = 188 bits (95), Expect = 1e-44 Identities = 340/414 (82%), Gaps = 15/414 (3%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggat-aagggcctcca 229 ||||||||||||||| |||| | | | |||||||||| || |||| || |||| |||| | Sbjct: 414 ttgataaggtaaatacccagtctattcaatgctaggcata-tgagtattaaggacctcaa 356 Query: 230 aaaaacttcttttcgttctatgaactttaaggtgtatgaagtctcatagttaactcttgc 289 ||||| ||||||||| ||||||||||||||||||||||||| ||||| || | | || Sbjct: 355 aaaaatctcttttcgtcctatgaactttaaggtgtatgaagtttcatattttattttta- 297 Query: 290 agtggaacgatagagactccatttcacttaggttgatttaatttagaccagaggcagacc 349 ||| || ||||||||||| ||||||||||||||| ||| ||| ||||||||||||| Sbjct: 296 agtagagcgatagagacttcatttcacttaggtt-----aatctaggccagaggcagacc 242 Query: 350 taagtcaaggtaatcctcctttgaaacactttggtattgctcctagatagatcataatac 409 || |||||| ||| || |||| |||| ||||||||| || |||| || ||| ||| | Sbjct: 241 tacgtcaagataaaccccctt-gaaaaactttggtagtgttcct-ga---atctgaatcc 187 Query: 410 aaaaaatcaatcagagcacagggagccatctcattatctttccgtaaagaaaaactatgg 469 ||| ||| | |||||||||| ||||||||||| |||| |||| || || ||||| ||||| Sbjct: 186 aaataatgactcagagcacatggagccatctccttatttttctgtcaaaaaaaa-tatgg 128 Query: 470 tggactaactgatctttaaatcagtttatgaaagagcccaatgcnnnnnnn-tgcatgtt 528 ||||| ||||| |||| ||||||| ||||||||||||||||| |||||||| Sbjct: 127 cggactggctgatatttatatcagttaatgaaagagcccaatgcacaaaaaatgcatgtt 68 Query: 529 gggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgtttta 582 ||||||||||||||||||| ||||||| ||||||||| ||||||||||||||| Sbjct: 67 gggtctttgaaacagttcagatcattttgataataataagtttgatctgtttta 14 Score = 60.0 bits (30), Expect = 9e-06 Identities = 100/124 (80%), Gaps = 5/124 (4%) Strand = Plus / Minus Query: 16 atgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcatagattcgagag 75 ||||||| || | ||| |||||||||| ||||| |||||||||| |||| | ||| | Sbjct: 561 atgcaatcaaaagaattgatcttattgagaaatcgatgtcttactccataactwtgaggg 502 Query: 76 aataggagaacagtagcctgacaaacagtcggttcagtccgattcaggtgccaattcagg 135 || | ||||||| |||||||||||| ||||| |||||||||||||||| ||| ||| Sbjct: 501 aacaagagaacaatagcctgacaaa-----ggttcggtccgattcaggtgcccatttagg 447 Query: 136 tgcc 139 |||| Sbjct: 446 tgcc 443
>emb|AJ429645.1|LGU429645 Lissocarpa guianensis chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1508 Score = 188 bits (95), Expect = 1e-44 Identities = 334/413 (80%), Gaps = 11/413 (2%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| |||| |||| | | | |||||||||| ||||||| |||||| |||| || Sbjct: 416 ttgataaggtgaatacccagtctattcaatgctaggcataatgagtataaggacctcaaa 357 Query: 231 aaaacttcttttcgttctatgaactttaaggtgtatgaagtctcatagttaactcttgca 290 |||| |||||||| |||||||||||||||||||| |||| ||||| || | | || | Sbjct: 356 aaaatctcttttcgccctatgaactttaaggtgtataaagtttcatatttgatttttaga 297 Query: 291 gtggaacgatagagactccatttcacttaggttgatttaatttagaccagaggcagacct 350 | | ||||||||||| |||| |||||||||||| || | |||||||||||||| Sbjct: 296 cag-agcgatagagactttatttaacttaggttgatcta-----ggccagaggcagacct 243 Query: 351 aagtcaaggtaatcctcctttgaaacactttggtattgctcctagatagatcataataca 410 | |||||| ||| ||| ||||||||||||||||| |||||| ||| || ||| || Sbjct: 242 acgtcaagataacccttttttgaaacactttggtagtgctccgggat----caaaatcca 187 Query: 411 aaaaatcaatcagagcacagggagccatctcattatctttccgtaaagaaaaactatggt 470 || ||| | ||||||||| |||||||||||| |||| |||| || |||||||| ||||| Sbjct: 186 aataatgagtcagagcacggggagccatctccttatttttctgtcaagaaaaaatatggc 127 Query: 471 ggactaactgatctttaaatcagtttatgaaagagcccaatgcnnnnnnn-tgcatgttg 529 |||| ||||| ||| ||||||| ||||||||||||||||| ||||||||| Sbjct: 126 agactggctgatatttctatcagttaatgaaagagcccaatgcaaaaaaaatgcatgttg 67 Query: 530 ggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgtttta 582 ||||||||||||||||| ||||||| |||||||||| ||||||||||||||| Sbjct: 66 ggtctttgaaacagttcggatcattttgataataatcagtttgatctgtttta 14 Score = 50.1 bits (25), Expect = 0.008 Identities = 70/85 (82%) Strand = Plus / Minus Query: 16 atgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcatagattcgagag 75 ||||||| || | ||| |||| ||||| |||||| |||||||||| |||| || ||| | Sbjct: 564 atgcaatcaaaagaattgatcgtattgaaaaatcgatgtcttactccataactttgaggg 505 Query: 76 aataggagaacagtagcctgacaaa 100 || | ||||||| |||||||||||| Sbjct: 504 aacaagagaacaatagcctgacaaa 480
>emb|AJ429738.1|DRI429738 Diervilla rivularis chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1515 Score = 184 bits (93), Expect = 2e-43 Identities = 316/386 (81%), Gaps = 15/386 (3%) Strand = Plus / Minus Query: 198 aatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaacttt 257 |||||||||| ||||||| |||||| |||| ||||| || |||||||| ||||||||||| Sbjct: 385 aatgctaggcataatgagtataaggacctcaaaaaatct-cttttcgtcctatgaacttt 327 Query: 258 aaggtgtatgaagtctcatagttaactcttgcagtggaacgatagagactccatttcact 317 |||||||||||||| ||||| || || || ||| || || |||||||| ||||| ||| Sbjct: 326 aaggtgtatgaagtttcata-ttttctttttaagtagatcggtagagacttcatttaact 268 Query: 318 taggttgatttaatttagaccagaggcagacctaagtcaaggtaatcctcctttgaaaca 377 || | ||||| ||| ||||||||||||||| |||||| ||| || ||||||||||| Sbjct: 267 tatg-----ttaatctaggccagaggcagacctacgtcaagataa-ccccctttgaaaca 214 Query: 378 ctttggtattgctcctagatagatcataatacaaaaaatcaatcagagcacagggagcca 437 ||||||||||| |||| | ||| ||| |||| ||| | ||||||||| ||||||| Sbjct: 213 ctttggtattgttcct-----ggtcagaatccaaataatgacccagagcacatggagcca 159 Query: 438 tctcattatctttccgtaaagaaaaactatggtggactaactgatctttaaatcagttta 497 |||| |||| |||| || || ||||| ||||| ||||| ||||| |||| ||||||| | Sbjct: 158 tctccttatttttctgtcaa-aaaaaatatggcggactggctgatatttatatcagttaa 100 Query: 498 tgaaagagcccaatgc-nnnnnnntgcatgttgggtctttgaaacagttcaaatcatttc 556 |||||||||||||||| |||||| |||||||||||||||||||| ||||||| Sbjct: 99 tgaaagagcccaatgcaaaaaaaatgcatgctgggtctttgaaacagttcagatcatttt 40 Query: 557 gataataatccgtttgatctgtttta 582 ||||||||| ||||||||||||||| Sbjct: 39 gataataataagtttgatctgtttta 14 Score = 58.0 bits (29), Expect = 3e-05 Identities = 71/85 (83%) Strand = Plus / Minus Query: 16 atgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcatagattcgagag 75 ||||||| || | ||| |||||||||| |||||||||||||||| |||| || ||| | Sbjct: 560 atgcaatcaaaagaattgatcttattgagaaatcaatgtcttactccataactttgaggg 501 Query: 76 aataggagaacagtagcctgacaaa 100 || | ||||||| |||||||||||| Sbjct: 500 aacaagagaacaatagcctgacaaa 476
>emb|AJ429704.1|GSP429704 Grevea sp. Thulin et al. s.n. chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1515 Score = 180 bits (91), Expect = 3e-42 Identities = 341/419 (81%), Gaps = 17/419 (4%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 ||||||||||||||| |||| | | | |||||||||| ||||||| |||||| |||| || Sbjct: 422 ttgataaggtaaatacccagtctattcaatgctaggcttaatgagtataaggacctcaaa 363 Query: 231 aaaacttcttttcgttctatgaactttaaggtgtatgaagtctcatagttaactcttgca 290 |||| ||||||||| ||||||||||||||||||||||||| ||||| || | | || | Sbjct: 362 aaaatctcttttcgtcctatgaactttaaggtgtatgaagtttcatatttgattttttaa 303 Query: 291 gtggaacgatagagactccatttcacttaggttgatttaatttagaccagaggcagacct 350 |||||||||||||| ||||| |||||||||| || ||| ||| |||||||||| Sbjct: 302 acagaacgatagagacttcatttaacttaggttg-----atctaggccataggcagacct 248 Query: 351 aagtcaaggtaa-tcctcctttgaaacactttggtattgctcctagatagatcataatac 409 | |||||| ||| || || ||| |||||||||||| ||||||| || |||| ||| | Sbjct: 247 acgtcaagataaccccacccttgtaacactttggtagtgctcct-ga---atcagaatcc 192 Query: 410 aaaa-aatcaatcagagcacagggagccatctc----attatctttccgtaaagaaaaac 464 |||| ||| |||| ||||||| |||||||| || |||| |||| || |||||||| Sbjct: 191 aaaataatgaatcggagcacatggagccatttcctatcttatttttctgtcaagaaaaa- 133 Query: 465 tatggtggactaactgatctttaaatcagtttatgaaagagcccaatgc-nnnnnnntgc 523 ||||| ||||| ||||| ||| |||||| ||||||||||||||||| ||| Sbjct: 132 tatggcagactagctgatatttctttcagttaatgaaagagcccaatgcaaaaaaaatgc 73 Query: 524 atgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgtttta 582 |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 72 atgttgggtctttgaaacagttcagatcattttgataataatccgtttgatctgtttta 14
>emb|AJ429729.1|BGR429729 Boopis graminea chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1485 Score = 178 bits (90), Expect = 1e-41 Identities = 315/386 (81%), Gaps = 14/386 (3%) Strand = Plus / Minus Query: 198 aatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaacttt 257 |||||||||| ||||||| |||||| |||| |||||| ||||||||| ||||||||||| Sbjct: 386 aatgctaggcataatgagtataaggacctcaaaaaaatctcttttcgtcctatgaacttt 327 Query: 258 aaggtgtatgaagtctcatagttaactcttgcagtggaacgatagagactccatttcact 317 |||||||||||||| ||||| || | | || ||| | ||||||||||| ||||||||| Sbjct: 326 aaggtgtatgaagtttcatatttga-tttttaagtaaagcgatagagacttcatttcact 268 Query: 318 taggttgatttaatttagaccagaggcagacctaagtcaaggtaatcctcctttgaaaca 377 |||| ||||| ||| ||||||||||||||| |||||| ||| || || |||||| | Sbjct: 267 tagg-----ttaatctaggccagaggcagacctacgtcaagataa-ccccccttgaaaaa 214 Query: 378 ctttggtattgctcctagatagatcataatacaaaaaatcaatcagagcacagggagcca 437 |||||||| || |||| || ||| ||| || | ||| | |||||||||| ||||||| Sbjct: 213 ctttggtagtgttcct-ga---atctgaatccacataatgactcagagcacatggagcca 158 Query: 438 tctcattatctttccgtaaagaaaaactatggtggactaactgatctttaaatcagttta 497 |||| |||| |||| || || ||||| |||| |||||| ||||| ||| ||||||| | Sbjct: 157 tctccttatttttctgtcaaaaaaaa--atggcggactagctgatatttttatcagttaa 100 Query: 498 tgaaagagcccaatgc-nnnnnnntgcatgttgggtctttgaaacagttcaaatcatttc 556 |||||||||||||||| ||||||||||||||||||||||||||| ||||||| Sbjct: 99 tgaaagagcccaatgcacaaaaaatgcatgttgggtctttgaaacagttcagatcatttt 40 Query: 557 gataataatccgtttgatctgtttta 582 ||||||||| || |||||||||||| Sbjct: 39 gataataataagtwtgatctgtttta 14
>emb|AJ429644.1|BAS429644 Barringtonia asiatica chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1529 Score = 178 bits (90), Expect = 1e-41 Identities = 340/421 (80%), Gaps = 21/421 (4%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| |||| |||| | | | |||||||||| ||||||| |||||| |||| || Sbjct: 422 ttgataaggtgaatacccagtctattcaatgctaggcataatgagtataaggacctcaaa 363 Query: 231 aaaacttcttttcgttctatgaactttaaggtgtatgaagtctcatagttaactctt--g 288 |||| ||||||||| |||||||||||||||||||| |||| ||||| || | | || | Sbjct: 362 aaaatctcttttcgtcctatgaactttaaggtgtataaagtttcatatttgatttttagg 303 Query: 289 cagtggaacgatagagactccatttcacttaggttgatttaatttagaccagaggcagac 348 || || ||||||||||| |||| |||||||||| || ||| |||||||||||| Sbjct: 302 ca---gagcgatagagactttatttaacttaggttg-----atctaggccagaggcagac 251 Query: 349 ctaagtcaaggtaatcctcctttgaaacactttggtattgctcctagatagatcataata 408 | | |||||| ||| ||| ||||||||||||||||| ||||||| || ||| ||| Sbjct: 250 ccacgtcaagataacccttttttgaaacactttggtagtgctcct-ga---atccaaatc 195 Query: 409 caaaaaatcaatcagagcacagggagccatctcattatctttccgt------aaagaaaa 462 |||| ||| ||||||||||| |||||||||||| |||| |||| || ||||||| Sbjct: 194 caaataatgaatcagagcacggggagccatctccttatttttctgtcaagaacaagaaaa 135 Query: 463 actatggtggactaactgatctttaaatcagtttatgaaagagcccaatgc-nnnnnnnt 521 | ||||| |||||||||||| |||| ||| ||| |||||| |||||||||| | Sbjct: 134 aatatggcggactaactgatatttatatccgttaatgaaaaagcccaatgcaaaaaaaat 75 Query: 522 gcatgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgtttt 581 ||||||||||| |||||||||||||| ||||||| |||||||||| |||||||||||||| Sbjct: 74 gcatgttgggtttttgaaacagttcagatcattttgataataatcagtttgatctgtttt 15 Query: 582 a 582 | Sbjct: 14 a 14 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 33 gatcttattgcaaaatcaatgtcttacttcatagattcgagagaataggagaacagtagc 92 |||||||||| |||||| |||||||||| |||| || ||| ||| | ||||||| |||| Sbjct: 558 gatcttattgaaaaatcgatgtcttactccataactttgagggaacaagagaacaatagc 499 Query: 93 ctgacaaa 100 |||||||| Sbjct: 498 ctgacaaa 491
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 176 bits (89), Expect = 5e-41 Identities = 304/372 (81%), Gaps = 12/372 (3%) Strand = Plus / Minus Query: 212 tgaggataagggcctccaaaaaacttcttttcgttctatgaactttaaggtgtatgaagt 271 |||| ||||||||||| |||||| ||||||||| ||||||||||||||||||| ||||| Sbjct: 51686 tgagcataagggcctcaaaaaaatctcttttcgtcctatgaactttaaggtgtacgaagt 51627 Query: 272 ctcatagttaactcttgcagtggaacgatagagactccatttcacttaggttgatttaat 331 ||||| || | | || | | || ||||||||||| ||||||||||||||| ||| Sbjct: 51626 ttcatatttgatttttaaa-tagagcgatagagacttcatttcacttaggtt-----aat 51573 Query: 332 ttagaccagaggcagacctaagtcaaggtaatcctcctttgaaacactttggtattgctc 391 ||| ||||||||||||||| |||||| ||| || |||| |||| ||||||||| || || Sbjct: 51572 ctaggccagaggcagacctacgtcaagataacccccctt-gaaaaactttggtagtgttc 51514 Query: 392 ctagatagatcataatacaaaaaatcaatcagagcacagggagccatctcattatctttc 451 || || ||| ||| || | ||| | |||||||||| ||||||||||| |||| |||| Sbjct: 51513 ct-ga---atctgaatccacataatgactcagagcacatggagccatctccttatttttc 51458 Query: 452 cgtaaagaaaaactatggtggactaactgatctttaaatcagtttatgaaagagcccaat 511 ||||| || || |||| |||||| ||||| |||| ||||||| ||||||||||||||| Sbjct: 51457 ggtaaaaaataaaaatggcggactagctgatatttatatcagttaatgaaagagcccaat 51398 Query: 512 gcnnnnnnn-tgcatgttgggtctttgaaacagttcaaatcatttcgataataatccgtt 570 || ||||||||||||||||||||||||||| ||||||| ||||||||| ||| Sbjct: 51397 gcacaaaaaatgcatgttgggtctttgaaacagttcagatcattttgataataataagtt 51338 Query: 571 tgatctgtttta 582 |||||||||||| Sbjct: 51337 tgatctgtttta 51326
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 176 bits (89), Expect = 5e-41 Identities = 158/181 (87%) Strand = Plus / Minus Query: 217 ataagggcctccaaaaaacttcttttcgttctatgaactttaaggtgtatgaagtctcat 276 |||||| |||| ||| ||| ||||||||| |||||||||||||||||||||||||||||| Sbjct: 53306 ataaggacctcaaaacaacctcttttcgtcctatgaactttaaggtgtatgaagtctcat 53247 Query: 277 agttaactcttgcagtggaacgatagagactccatttcacttaggttgatttaatttaga 336 | || |||||| || ||| |||||||||||| |||| ||||||||| | || || ||| Sbjct: 53246 atttgactcttagagcggaccgatagagactcaatttaacttaggttaaattgatctagg 53187 Query: 337 ccagaggcagacctaagtcaaggtaatcctcctttgaaacactttggtattgctcctaga 396 ||||||||||||||| ||||| |||| || ||||||||||||||||||||||||||||| Sbjct: 53186 ccagaggcagacctacgtcaaagtaacccctctttgaaacactttggtattgctcctaga 53127 Query: 397 t 397 | Sbjct: 53126 t 53126 Score = 119 bits (60), Expect = 1e-23 Identities = 108/125 (86%), Gaps = 1/125 (0%) Strand = Plus / Minus Query: 459 aaaaactatggtggactaactgatctttaaatcagtttatgaaagagcccaatgcnnnnn 518 ||||| ||||||| | ||||||||||||| ||| ||| ||||||||||||||||| Sbjct: 53059 aaaaaatatggtgcaataactgatctttacatcggttgatgaaagagcccaatgcaataa 53000 Query: 519 nn-tgcatgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctg 577 |||||||||||||||||||||||||| |||||||||||||||||| |||||||||| Sbjct: 52999 aaatgcatgttgggtctttgaaacagttcgaatcatttcgataataataagtttgatctg 52940 Query: 578 tttta 582 ||||| Sbjct: 52939 tttta 52935 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 24 aacataatcgatcttattgcaaaatcaatgtcttacttcatagattcgagagaataggag 83 |||| ||| |||||||||| |||| |||||||||| || ||||||| |||| ||||| Sbjct: 53506 aacagaattgatcttattgatgaatcgatgtcttactccacggattcgaaagaagaggag 53447 Query: 84 aacagtagcctgacaaa 100 |||| |||||||||||| Sbjct: 53446 aacaatagcctgacaaa 53430
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 176 bits (89), Expect = 5e-41 Identities = 304/372 (81%), Gaps = 12/372 (3%) Strand = Plus / Minus Query: 212 tgaggataagggcctccaaaaaacttcttttcgttctatgaactttaaggtgtatgaagt 271 |||| ||||||||||| |||||| ||||||||| ||||||||||||||||||| ||||| Sbjct: 51685 tgagcataagggcctcaaaaaaatctcttttcgtcctatgaactttaaggtgtacgaagt 51626 Query: 272 ctcatagttaactcttgcagtggaacgatagagactccatttcacttaggttgatttaat 331 ||||| || | | || | | || ||||||||||| ||||||||||||||| ||| Sbjct: 51625 ttcatatttgatttttaaa-tagagcgatagagacttcatttcacttaggtt-----aat 51572 Query: 332 ttagaccagaggcagacctaagtcaaggtaatcctcctttgaaacactttggtattgctc 391 ||| ||||||||||||||| |||||| ||| || |||| |||| ||||||||| || || Sbjct: 51571 ctaggccagaggcagacctacgtcaagataacccccctt-gaaaaactttggtagtgttc 51513 Query: 392 ctagatagatcataatacaaaaaatcaatcagagcacagggagccatctcattatctttc 451 || || ||| ||| || | ||| | |||||||||| ||||||||||| |||| |||| Sbjct: 51512 ct-ga---atctgaatccacataatgactcagagcacatggagccatctccttatttttc 51457 Query: 452 cgtaaagaaaaactatggtggactaactgatctttaaatcagtttatgaaagagcccaat 511 ||||| || || |||| |||||| ||||| |||| ||||||| ||||||||||||||| Sbjct: 51456 ggtaaaaaataaaaatggcggactagctgatatttatatcagttaatgaaagagcccaat 51397 Query: 512 gcnnnnnnn-tgcatgttgggtctttgaaacagttcaaatcatttcgataataatccgtt 570 || ||||||||||||||||||||||||||| ||||||| ||||||||| ||| Sbjct: 51396 gcacaaaaaatgcatgttgggtctttgaaacagttcagatcattttgataataataagtt 51337 Query: 571 tgatctgtttta 582 |||||||||||| Sbjct: 51336 tgatctgtttta 51325
>emb|AJ429700.1|PPR429700 Polypremum procumbens chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1502 Score = 176 bits (89), Expect = 5e-41 Identities = 317/388 (81%), Gaps = 23/388 (5%) Strand = Plus / Minus Query: 198 aatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaacttt 257 |||||||||| ||||||| |||||| |||| |||||| ||||||||| ||||||||||| Sbjct: 391 aatgctaggcataatgagtataaggtcctcaaaaaaatctcttttcgtcctatgaacttt 332 Query: 258 aaggtgtatgaagtctcatagttaactcttgcagtggaacgatagagactccatttcact 317 ||||||||||||| ||||| || | |||| |||||||||||||| ||||| ||| Sbjct: 331 aaggtgtatgaagcttcatattt---tattgc---cgaacgatagagacttcatttaact 278 Query: 318 taggttgatttaatttagaccagaggcagacctaagtcaaggtaa-tcctcctttgaaac 376 ||||||| || ||| ||||||||||||||| |||||| ||| || || ||||||| Sbjct: 277 taggttg-----atctaggccagaggcagacctacgtcaagataaccccacccttgaaac 223 Query: 377 actttggtattgctcctagatagatcataatac-aaaaaatcaatcagagcacagggagc 435 ||||||||| ||||||| || |||| ||| | ||||||| |||||||||||| ||||| Sbjct: 222 actttggtagtgctcct-ga---atcagaatcctaaaaaatgaatcagagcacatggagc 167 Query: 436 catctcattatc-----tttccgtaaagaaaaactatggtggactaactgatctttaaat 490 |||||| ||||| |||| || |||||||| ||||| |||||||||||| ||| || Sbjct: 166 catctctttatcttttttttctgtcaagaaaaaatatggcggactaactgatatttctat 107 Query: 491 cagtttatgaaagagcccaatgc-nnnnnnntgcatgttgggtctttgaaacagttcaaa 549 ||| | ||||||||||||||||| ||||||||||||||||||||||||||| | Sbjct: 106 caggtaatgaaagagcccaatgcaaaaaaaatgcatgttgggtctttgaaacagttcaga 47 Query: 550 tcatttcgataataatccgtttgatctg 577 |||||| |||||||| |||||||||| Sbjct: 46 tcattttgataataagaagtttgatctg 19
>emb|AJ429658.1|SBO429658 Symplocos bogotensis chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1477 Score = 176 bits (89), Expect = 5e-41 Identities = 207/247 (83%), Gaps = 5/247 (2%) Strand = Plus / Minus Query: 337 ccagaggcagacctaagtcaaggtaatcctcctttgaaacactttggtattgctcctaga 396 ||||||||||||||| |||||| ||| ||| ||||||||||||||||| ||||||| || Sbjct: 256 ccagaggcagacctacgtcaagataacccttttttgaaacactttggtagtgctcctgga 197 Query: 397 tagatcataatacaaaaaatcaatcagagcacagggagccatctcattatctttccgtaa 456 | || ||| ||| ||| ||||||||||| |||||||||||| |||| |||| || | Sbjct: 196 t----caaaatcaaaataatgaatcagagcacggggagccatctccttatttttctgtca 141 Query: 457 agaaaaactatggtggactaactgatctttaaatcagtttatgaaagagcccaatgc-nn 515 ||||||| ||||| ||||| ||||| |||| ||||||| ||||||||||||||||| Sbjct: 140 agaaaaaatatggcggactggctgatatttatatcagttaatgaaagagcccaatgcaaa 81 Query: 516 nnnnntgcatgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatc 575 |||||||||||||||||||||||||| ||||||| |||||||||| |||||||| Sbjct: 80 aaaaatgcatgttgggtctttgaaacagttcggatcattttgataataatcagtttgatc 21 Query: 576 tgtttta 582 ||||||| Sbjct: 20 tgtttta 14 Score = 81.8 bits (41), Expect = 2e-12 Identities = 85/97 (87%), Gaps = 2/97 (2%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 ||||||||||||||| |||| | | | |||||||||| ||||||| |||||| |||| || Sbjct: 416 ttgataaggtaaatacccagtctattcaatgctaggcataatgagtataaggacctc-aa 358 Query: 231 aaaact-tcttttcgttctatgaactttaaggtgtat 266 |||||| ||||||||| |||||| ||||||||||||| Sbjct: 357 aaaactctcttttcgtcctatgagctttaaggtgtat 321
>dbj|D00432.1|RICCPATP Oryza sativa (japonica cultivar-group) chloroplast atpB and atpE genes for beta and epsilon subunits of ATP synthase, complete cds and franks Length = 3004 Score = 172 bits (87), Expect = 8e-40 Identities = 111/119 (93%) Strand = Plus / Plus Query: 6 ggagcttattatgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcata 65 |||||||||||||||||||||||| | |||||| |||||||||||| |||||||||||| Sbjct: 2883 ggagcttattatgcaatgaacatagtggatcttcttgcaaaatcaacgtcttacttcatg 2942 Query: 66 gattcgagagaataggagaacagtagcctgacaaacagtcggttcagtccgattcaggt 124 |||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||| Sbjct: 2943 gattcgagagaataggagaacagtcgcctgacaaatagttggttcagtccgattcaggt 3001
>emb|AJ429682.1|PFL429682 Peltanthera floribunda chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1468 Score = 172 bits (87), Expect = 8e-40 Identities = 319/393 (81%), Gaps = 18/393 (4%) Strand = Plus / Minus Query: 198 aatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaacttt 257 |||||||||| ||||||| |||||| |||| |||||| ||||||||| ||||||||||| Sbjct: 386 aatgctaggcataatgagtataaggtcctc-aaaaaatatcttttcgtcctatgaacttt 328 Query: 258 aaggtgtatgaagtctcatagttaactcttgcagtggaacgatagagactccatttcact 317 |||||||||||||| ||||| || | | || || |||||||||||||| ||||| ||| Sbjct: 327 aaggtgtatgaagtttcatatttgattttttaagccgaacgatagagacttcatttaact 268 Query: 318 taggttgatttaatttagaccagaggcagacctaagtcaaggtaa-tcctcctttgaaac 376 || |||| || | ||||||||||||||| ||||| ||| ||| |||||||||| Sbjct: 267 taaaatgatcta-----ggccagaggcagacctatgtcaaaataactccacctttgaaac 213 Query: 377 actttggtattgctcctagatagatcataatacaaaa-aatcaatcagagcacagggagc 435 ||||||||| ||||||| ||| || ||| | ||| ||| |||| ||||| | ||||| Sbjct: 212 actttggtagtgctcctggat----cagaatcccaaataatgaatccgagcatatggagc 157 Query: 436 catctcattatctt-----tccgtaaagaaaaactatggtggactaactgatctttaaat 490 |||||| ||||||| || || |||||||| ||||| ||| |||||||| ||| || Sbjct: 156 catctccttatcttatttttctgtcaagaaaaaatatggcggattaactgatatttctat 97 Query: 491 cagtttatgaaagagcccaatgcnnnnnnn-tgcatgttgggtctttgaaacagttcaaa 549 ||||| ||||||||||||||||| ||||||||||||||||||||||||||| | Sbjct: 96 cagttaatgaaagagcccaatgcaaaaaaaatgcatgttgggtctttgaaacagttcaga 37 Query: 550 tcatttcgataataatccgtttgatctgtttta 582 |||||| ||||||||| ||||||||||||||| Sbjct: 36 tcattttgataataataagtttgatctgtttta 4
>emb|AJ429659.1|TGY429659 Ternstroemia gymnanthera chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1488 Score = 172 bits (87), Expect = 8e-40 Identities = 282/345 (81%), Gaps = 14/345 (4%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| |||| |||| | | | |||||||||| ||||||| |||||| |||| || Sbjct: 420 ttgataaggtgaatacccagtctattcaatgctaggcataatgagtataaggacctcaaa 361 Query: 231 aaaacttcttttcgttctatgaactttaaggtgtatgaagtctcatagttaactctt--g 288 |||| ||||||||| |||||||||||||||||||| ||| ||||| || | | || | Sbjct: 360 aaaatatcttttcgtcctatgaactttaaggtgtataaaggttcatattttatttttagg 301 Query: 289 cagtggaacgatagagactccatttcacttaggttgatttaatttagaccagaggcagac 348 ||| ||||||||||||| |||| ||||||||| ||| ||| |||||||||||| Sbjct: 300 cag---aacgatagagactttatttaacttaggtt-----aatctaggccagaggcagac 249 Query: 349 ctaagtcaaggtaatcctcctttgaaacactttggtattgctcctagatagatcataata 408 ||| |||||| ||| ||| ||||||||||||||||| ||||||| ||| || || Sbjct: 248 ctacgtcaagataacccttttttgaaacactttggtagtgctcctggat----caaaacc 193 Query: 409 caaaaaatcaatcagagcacagggagccatctcattatctttccgtaaagaaaaactatg 468 | |||||| ||||||||||| |||||||||||| |||| |||| || |||||||| |||| Sbjct: 192 ccaaaaatgaatcagagcacggggagccatctccttatttttctgtcaagaaaaaatatg 133 Query: 469 gtggactaactgatctttaaatcagtttatgaaagagcccaatgc 513 | ||||| ||||| |||| ||||||| ||||||||||||||||| Sbjct: 132 gcggactggctgatatttatatcagttaatgaaagagcccaatgc 88 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Minus Query: 521 tgcatgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgttt 580 |||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| || Sbjct: 75 tgcatgttgggtctttgaaacagttcggatcattttgataataattagtttgatctggtt 16 Query: 581 ta 582 || Sbjct: 15 ta 14 Score = 58.0 bits (29), Expect = 3e-05 Identities = 71/85 (83%) Strand = Plus / Minus Query: 16 atgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcatagattcgagag 75 ||||||| || | ||| |||||||||| |||||| |||||||||| |||| || ||| | Sbjct: 573 atgcaatcaaaagaattgatcttattgaaaaatcgatgtcttactccataattttgaggg 514 Query: 76 aataggagaacagtagcctgacaaa 100 || | ||||||| |||||||||||| Sbjct: 513 aacaagagaacaatagcctgacaaa 489
>emb|AJ429643.1|FDI429643 Fouquieria diguetii chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1486 Score = 172 bits (87), Expect = 8e-40 Identities = 202/241 (83%), Gaps = 5/241 (2%) Strand = Plus / Minus Query: 343 gcagacctaagtcaaggtaatcctcctttgaaacactttggtattgctcctagatagatc 402 ||||||||| |||||| ||| ||| ||||||||||||||||| ||||||| ||| | Sbjct: 250 gcagacctacgtcaagataacccttttttgaaacactttggtagtgctcctggat----c 195 Query: 403 ataatacaaaaaatcaatcagagcacagggagccatctcattatctttccgtaaagaaaa 462 | ||| |||| ||| ||||||||||| |||||||||||| |||| |||| || ||||||| Sbjct: 194 aaaatccaaataatgaatcagagcacggggagccatctccttatttttctgtcaagaaaa 135 Query: 463 actatggtggactaactgatctttaaatcagtttatgaaagagcccaatgc-nnnnnnnt 521 | ||||| ||||| ||||| |||| ||||||| ||||||||||||||||| | Sbjct: 134 aatatggcggactggctgatatttatatcagttaatgaaagagcccaatgcaaaaaaaat 75 Query: 522 gcatgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgtttt 581 ||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||||| Sbjct: 74 gcatgttgggtctttgaaacagttcggatcattttgataataatcagtttgatctgtttt 15 Query: 582 a 582 | Sbjct: 14 a 14 Score = 71.9 bits (36), Expect = 2e-09 Identities = 70/80 (87%), Gaps = 1/80 (1%) Strand = Plus / Minus Query: 198 aatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaacttt 257 |||||||||| ||||||| |||||| |||| |||| || |||||||| ||||||||||| Sbjct: 388 aatgctaggcataatgagtataaggacctcaaaaattct-cttttcgtcctatgaacttt 330 Query: 258 aaggtgtatgaagtctcata 277 ||||||||| |||| ||||| Sbjct: 329 aaggtgtataaagtttcata 310 Score = 44.1 bits (22), Expect = 0.51 Identities = 70/86 (81%) Strand = Plus / Minus Query: 16 atgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcatagattcgagag 75 ||||||| || | ||| ||||||||| |||||| |||||||||| ||| || ||| | Sbjct: 568 atgcaatcaaaagaattgatcttattaaaaaatcgatgtcttactctataactttgaggg 509 Query: 76 aataggagaacagtagcctgacaaac 101 || | ||||||| ||||||||||||| Sbjct: 508 aacaagagaacaatagcctgacaaac 483
>emb|AJ429737.1|LOR429737 Lonicera orientalis chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1499 Score = 170 bits (86), Expect = 3e-39 Identities = 315/386 (81%), Gaps = 17/386 (4%) Strand = Plus / Minus Query: 198 aatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaacttt 257 |||||||||| ||||||| |||||| |||| ||||| || |||||||| ||||||||||| Sbjct: 383 aatgctaggcataatgagtataaggacctcaaaaaatct-cttttcgtcctatgaacttt 325 Query: 258 aaggtgtatgaagtctcatagttaactcttgcagtggaacgatagagactccatttcact 317 |||||||||||||| ||||| || || || ||| ||||| |||| ||| ||||| ||| Sbjct: 324 aaggtgtatgaagtttcata-ttttctttttaagtagaacggtagaaacttcatttaact 266 Query: 318 taggttgatttaatttagaccagaggcagacctaagtcaaggtaatcctcctttgaaaca 377 |||| ||||| ||| ||||||||||||||| |||||| ||| | ||||||||||| Sbjct: 265 tagg-----ttaatctaggccagaggcagacctacgtcaagataa--cccctttgaaaca 213 Query: 378 ctttggtattgctcctagatagatcataatacaaaaaatcaatcagagcacagggagcca 437 ||||||||||| |||| | ||| ||| |||| ||| | ||||||||| ||||||| Sbjct: 212 ctttggtattgttcct-----ggtcagaatccaaataatgacccagagcacatggagcca 158 Query: 438 tctcattatctttccgtaaagaaaaactatggtggactaactgatctttaaatcagttta 497 |||| |||| |||| || || ||||| ||||| ||||| ||||| |||| ||||||| | Sbjct: 157 tctc-ttatttttctgtcaa-aaaaaatatggcggactggctgatatttatatcagttaa 100 Query: 498 tgaaagagcccaatgc-nnnnnnntgcatgttgggtctttgaaacagttcaaatcatttc 556 |||||||||||||||| ||||||||||||||||||||||||||| ||||||| Sbjct: 99 tgaaagagcccaatgcaaaaaaaatgcatgttgggtctttgaaacagttcagatcatttt 40 Query: 557 gataataatccgtttgatctgtttta 582 |||||||| | ||||||||||||| Sbjct: 39 gataataaaaaggttgatctgtttta 14 Score = 44.1 bits (22), Expect = 0.51 Identities = 43/50 (86%) Strand = Plus / Minus Query: 16 atgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcata 65 ||||||| || | ||| |||||||||| |||||||||||||||| |||| Sbjct: 548 atgcaatcaaaagaattgatcttattgagaaatcaatgtcttactccata 499
>emb|AJ429654.1|SCE429654 Sladenia celastrifolia chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1458 Score = 168 bits (85), Expect = 1e-38 Identities = 206/247 (83%), Gaps = 5/247 (2%) Strand = Plus / Minus Query: 337 ccagaggcagacctaagtcaaggtaatcctcctttgaaacactttggtattgctcctaga 396 ||||||||||||||| |||||| ||| || ||||||||||||||||| ||||||| || Sbjct: 256 ccagaggcagacctacgtcaagataacccctttttgaaacactttggtagtgctcctgga 197 Query: 397 tagatcataatacaaaaaatcaatcagagcacagggagccatctcattatctttccgtaa 456 | || ||| |||| ||| ||||||||||| |||||||||||| ||| |||| || | Sbjct: 196 t----caaaatccaaataatgaatcagagcacggggagccatctccctatttttctgtca 141 Query: 457 agaaaaactatggtggactaactgatctttaaatcagtttatgaaagagcccaatgc-nn 515 ||||||| ||||| |||||||||||| |||| ||||||| ||||||||||||||||| Sbjct: 140 agaaaaaatatggcggactaactgatatttatatcagttaatgaaagagcccaatgcaaa 81 Query: 516 nnnnntgcatgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatc 575 |||||||||||||||||||||||||| ||||||| |||||||| |||||||| Sbjct: 80 aaaaatgcatgttgggtctttgaaacagttcggatcattttgataataacgagtttgatc 21 Query: 576 tgtttta 582 ||||||| Sbjct: 20 tgtttta 14 Score = 95.6 bits (48), Expect = 2e-16 Identities = 72/80 (90%) Strand = Plus / Minus Query: 198 aatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaacttt 257 |||||||||| ||||||| |||||| |||| |||||| ||||||||||||||||||||| Sbjct: 389 aatgctaggcataatgagtataaggacctcaaaaaaatatcttttcgttctatgaacttt 330 Query: 258 aaggtgtatgaagtctcata 277 ||||||||| |||| ||||| Sbjct: 329 aaggtgtataaagtttcata 310 Score = 58.0 bits (29), Expect = 3e-05 Identities = 71/85 (83%) Strand = Plus / Minus Query: 16 atgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcatagattcgagag 75 ||||||| || | ||| |||||||||| |||||| |||||||||| |||| || ||| | Sbjct: 569 atgcaatcaaaagaattgatcttattgaaaaatcgatgtcttactccataactttgaggg 510 Query: 76 aataggagaacagtagcctgacaaa 100 || | ||||||| |||||||||||| Sbjct: 509 aacaagagaacaatagcctgacaaa 485
>emb|AJ429642.1|DKA429642 Diospyros kaki chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1497 Score = 168 bits (85), Expect = 1e-38 Identities = 206/247 (83%), Gaps = 5/247 (2%) Strand = Plus / Minus Query: 337 ccagaggcagacctaagtcaaggtaatcctcctttgaaacactttggtattgctcctaga 396 ||||||||||||||| |||||| ||| ||| ||||||||||||||||| ||||||| || Sbjct: 256 ccagaggcagacctacgtcaagataacccttttttgaaacactttggtagtgctcctgga 197 Query: 397 tagatcataatacaaaaaatcaatcagagcacagggagccatctcattatctttccgtaa 456 | || ||| |||| ||| ||||||||||| |||||||||||| |||| |||| || | Sbjct: 196 t----caaaatccaaataatgaatcagagcacggggagccatctccttatttttctgtca 141 Query: 457 agaaaaactatggtggactaactgatctttaaatcagtttatgaaagagcccaatgc-nn 515 ||||||| ||||| |||| ||||| ||| ||||||| ||||||||||||||||| Sbjct: 140 agaaaaaatatggcagactggctgatatttccatcagttaatgaaagagcccaatgcaaa 81 Query: 516 nnnnntgcatgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatc 575 |||||||||||||||||||||||||| ||||||| |||||||||| |||||||| Sbjct: 80 aaaaatgcatgttgggtctttgaaacagttcggatcattttgataataatcagtttgatc 21 Query: 576 tgtttta 582 ||||||| Sbjct: 20 tgtttta 14 Score = 93.7 bits (47), Expect = 6e-16 Identities = 92/107 (85%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| ||||| ||| | | | |||||||||| ||||||| |||||| |||| || Sbjct: 416 ttgataaggtgaatattcagtctattcaatgctaggcataatgagtataaggacctcaaa 357 Query: 231 aaaacttcttttcgttctatgaactttaaggtgtatgaagtctcata 277 |||| ||||||||| |||||||||||||||||||| |||| ||||| Sbjct: 356 aaaatctcttttcgtcctatgaactttaaggtgtataaagtttcata 310 Score = 50.1 bits (25), Expect = 0.008 Identities = 70/85 (82%) Strand = Plus / Minus Query: 16 atgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcatagattcgagag 75 ||||||| || | ||| |||| ||||| |||||| |||||||||| |||| || ||| | Sbjct: 569 atgcaatcaaaagaattgatcgtattgaaaaatcgatgtcttactccataactttgaggg 510 Query: 76 aataggagaacagtagcctgacaaa 100 || | ||||||| |||||||||||| Sbjct: 509 aacaagagaacaatagcctgacaaa 485
>emb|AJ429639.1|LTR429639 Loasa triphylla chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1542 Score = 168 bits (85), Expect = 1e-38 Identities = 311/386 (80%), Gaps = 11/386 (2%) Strand = Plus / Minus Query: 198 aatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaacttt 257 |||||||||| ||||||| |||||| |||| |||||| ||||||||| ||||||||||| Sbjct: 389 aatgctaggcataatgagtataaggacctcaaaaaaatctcttttcgtcctatgaacttt 330 Query: 258 aaggtgtatgaagtctcatagttaactcttgcagtggaacgatagagactccatttcact 317 |||||||||||||| ||||| || | | || || || ||||||||||| ||||| ||| Sbjct: 329 aaggtgtatgaagtttcatatttta-tttttaagcagagcgatagagacttcatttaact 271 Query: 318 taggttgatttaatttagaccagaggcagacctaagtcaaggtaatcctcctttgaaaca 377 ||| ||| || ||| ||||||||||||||| |||||| ||| || ||||||||| Sbjct: 270 tagattg-----atctaggccagaggcagacctacgtcaagataacccctttttgaaaca 216 Query: 378 ctttggtattgctcctagatagatcataatacaaaaaatcaatcagagcacagggagcca 437 |||||||| |||| | | | ||| ||| |||| ||| ||||||| |||| ||||||| Sbjct: 215 ctttggtagtgcttc----tggctcagaatccaaataatgaatcagaacacatggagcca 160 Query: 438 tctcattatctttccgtaaagaaaaactatggtggactaactgatctttaaatcagttta 497 ||| ||||||||| || ||| |||| ||||| | || ||||| ||| ||||||| Sbjct: 159 tcttcttatctttctgtgaaggaaaaatatggcaaagtanctgatatttctatcagttac 100 Query: 498 tgaaagagcccaatgc-nnnnnnntgcatgttgggtctttgaaacagttcaaatcatttc 556 |||||||||||||||| |||||||||||||||||||||||||| ||||||| Sbjct: 99 tgaaagagcccaatgcacaaaaaatgcatgttgggtctttgaaacagttcggatcatttt 40 Query: 557 gataataatccgtttgatctgtttta 582 |||||||||| ||||||||||||||| Sbjct: 39 gataataatcagtttgatctgtttta 14
>emb|AJ429526.1|CAL429526 Clethra alnifolia chloroplast atpE gene (partial), tRNA-Val gene and tRNA-Met gene Length = 1470 Score = 168 bits (85), Expect = 1e-38 Identities = 200/239 (83%), Gaps = 5/239 (2%) Strand = Plus / Minus Query: 337 ccagaggcagacctaagtcaaggtaatcctcctttgaaacactttggtattgctcctaga 396 ||||||||||||||| |||||| ||| ||| ||||||||||||||||| ||||||| || Sbjct: 235 ccagaggcagacctacgtcaagctaacccttttttgaaacactttggtagtgctcctgga 176 Query: 397 tagatcataatacaaaaaatcaatcagagcacagggagccatctcattatctttccgtaa 456 | || |||| ||| ||| ||||||||||| |||||||||||| |||| |||| || | Sbjct: 175 t----caaaataaaaataatgaatcagagcacggggagccatctccttatttttctgtca 120 Query: 457 agaaaaactatggtggactaactgatctttaaatcagtttatgaaagagcccaatgc-nn 515 ||||||| ||||| ||||| ||||| |||| ||||||| ||||||||||||||||| Sbjct: 119 agaaaaaatatggcggactggctgatatttatatcagttaatgaaagagcccaatgcaaa 60 Query: 516 nnnnntgcatgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgat 574 |||||||||||||||||||||||||| ||||||| |||||||||| ||||||| Sbjct: 59 aaaaatgcatgttgggtctttgaaacagttcggatcattttgataataatcagtttgat 1 Score = 87.7 bits (44), Expect = 4e-14 Identities = 71/80 (88%) Strand = Plus / Minus Query: 198 aatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaacttt 257 |||||||||| ||||||| |||||| |||| |||||| ||||||||| ||||||||||| Sbjct: 368 aatgctaggcataatgagtataaggacctcaaaaaaatatcttttcgtcctatgaacttt 309 Query: 258 aaggtgtatgaagtctcata 277 ||||||||| |||| ||||| Sbjct: 308 aaggtgtataaagtttcata 289 Score = 58.0 bits (29), Expect = 3e-05 Identities = 71/85 (83%) Strand = Plus / Minus Query: 16 atgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcatagattcgagag 75 ||||||| || | ||| |||||||||| |||||| |||||||||| |||| || ||| | Sbjct: 549 atgcaatcaaaagaattgatcttattgaaaaatcgatgtcttactccataactttgaggg 490 Query: 76 aataggagaacagtagcctgacaaa 100 || | ||||||| |||||||||||| Sbjct: 489 aacaagagaacaatagcctgacaaa 465
>emb|AJ429717.1|ASP429717 Aralia spinosa chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1482 Score = 167 bits (84), Expect = 5e-38 Identities = 334/413 (80%), Gaps = 15/413 (3%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| |||| |||| | | | |||||||||| ||||||| |||||| |||| || Sbjct: 412 ttgataaggtgaatacccagtctattcaatgctaggcataatgagtataaggacctcaaa 353 Query: 231 aaaacttcttttcgttctatgaactttaaggtgtatgaagtctcatagttaactcttgca 290 ||| || |||||||| ||||||||||||||||||||||||| ||||| || | | || | Sbjct: 352 aaatct-cttttcgtcctatgaactttaaggtgtatgaagtttcatatttta-tttttaa 295 Query: 291 gtggaacgatagagactccatttcacttaggttgatttaatttagaccagaggcagacct 350 | || ||||||||||| ||| | ||||||| ||||| ||| ||||||||| |||| Sbjct: 294 gcagagcgatagagacttcatctaacttagg-----ttaatctaggccagaggcaaacct 240 Query: 351 aagtcaaggtaatcctcctttgaaacactttggtattgctcctagatagatcataataca 410 | |||||| ||| || ||||||||||||||||||| || ||| | ||||| ||| || Sbjct: 239 acgtcaagataacccccctttgaaacactttggtagtgttcc----tggatcagaattca 184 Query: 411 aaaaatcaatcagagcacagggagccatctcattatctttccgtaaagaaaaactatggt 470 || ||| | ||||||||| ||||||||||| |||| |||| || ||||| ||||| Sbjct: 183 aataatgactcagagcacctggagccatctccttat-tttc--tattaaaaaaatatggc 127 Query: 471 ggactaactgatctttaaatcagtttatgaaagagcccaatgc-nnnnnnntgcatgttg 529 ||||| ||||| |||| ||||||| ||||||||||||||||| ||||||||| Sbjct: 126 ggacttgctgatatttatatcagttaatgaaagagcccaatgcacaaaaaatgcatgttg 67 Query: 530 ggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgtttta 582 |||||||||||||||||| ||||||| ||||||||| ||||| ||||||||| Sbjct: 66 ggtctttgaaacagttcagatcattttgataataataagtttggtctgtttta 14 Score = 50.1 bits (25), Expect = 0.008 Identities = 70/85 (82%) Strand = Plus / Minus Query: 16 atgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcatagattcgagag 75 ||||||| |||| ||| ||| |||||| ||||| |||||||||| |||| || ||| | Sbjct: 561 atgcaatcaacagaattgattttattgataaatcgatgtcttactccataactttgaggg 502 Query: 76 aataggagaacagtagcctgacaaa 100 || | ||||||| |||||||||||| Sbjct: 501 aacaagagaacaatagcctgacaaa 477
>emb|AJ007793.1|PEQ7793 Phalaenopsis equestris satellite DNA, isolate W9A1 Length = 780 Score = 165 bits (83), Expect = 2e-37 Identities = 210/252 (83%), Gaps = 9/252 (3%) Strand = Plus / Minus Query: 198 aatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaacttt 257 ||||| |||| ||||||| |||||| ||| ||| ||| ||||||||| |||||| |||| Sbjct: 721 aatgccaggcataatgagtataaggatctcaaaagaacctcttttcgtcctatgagcttt 662 Query: 258 aaggtgtatgaagtctcatagttaactcttgcagtggaacgatagagactccatttcact 317 ||||||||||||||||||| || |||||||||| ||| ||||||||||| ||||||| | Sbjct: 661 gaggtgtatgaagtctcatattttactcttgcagcggagcgatagagactgcatttcatt 602 Query: 318 taggttgatttaatttagaccagaggcagacctaagtcaaggtaatcctcctttgaaaca 377 ||| ||| || ||| || |||||||||||| | ||||| | ||| |||||||||| Sbjct: 601 tagattg-----atctaggccgaaggcagacctaaataaaggtcacccttctttgaaaca 547 Query: 378 ctttggtattgctcctagatagatcataatacaaaaaatcaatcagagcacagggagcca 437 ||||||||||||||| ||||||| ||||||| ||| |||||||||||| ||||||| Sbjct: 546 ctttggtattgctcc----tagatcaggatacaaataatgaatcagagcacatggagcca 491 Query: 438 tctcattatctt 449 ||||| |||||| Sbjct: 490 tctcaatatctt 479 Score = 147 bits (74), Expect = 5e-32 Identities = 109/123 (88%) Strand = Plus / Minus Query: 460 aaaactatggtggactaactgatctttaaatcagtttatgaaagagcccaatgcnnnnnn 519 |||||||||||||||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 451 aaaactatggtggactaactgatctttacatcagttgatgaaagagcccaatgcaacaaa 392 Query: 520 ntgcatgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgtt 579 |||||||||||||||||||||||||| |||||||||||||||||| |||| |||||| Sbjct: 391 atgcatgttgggtctttgaaacagttcgaatcatttcgataataataagttttctctgtt 332 Query: 580 tta 582 ||| Sbjct: 331 tta 329
>emb|AJ429697.1|BAS429697 Buddleja asiatica chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1498 Score = 165 bits (83), Expect = 2e-37 Identities = 319/395 (80%), Gaps = 20/395 (5%) Strand = Plus / Minus Query: 198 aatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaacttt 257 |||||||||| ||||||| |||||| |||| ||||| || |||||||| ||||||||||| Sbjct: 398 aatgctaggcataatgagtataaggtcctcaaaaaatct-cttttcgtcctatgaacttt 340 Query: 258 aaggtgtatgaagtctcatagttaactcttgcagtggaacgatagagactccatttcact 317 |||||||||||||| ||||| || | | || || |||||||||||||| ||||| ||| Sbjct: 339 aaggtgtatgaagtttcatatttgattttttaagccgaacgatagagacttcatttaact 280 Query: 318 taggttgatttaatttagaccagaggcagacctaagtcaaggtaa-tcctcctttgaaac 376 || | | || ||| ||||||||||||||| |||||| ||| || |||||||||| Sbjct: 279 ta-----aaatgatctaggccagaggcagacctacgtcaagataaccccacctttgaaac 225 Query: 377 actttggtattgctcctagatagatcataat-acaaaaaatcaatcagagcacagggagc 435 ||||||||| |||||| | ||||| ||| |||| ||| |||||||||||| ||||| Sbjct: 224 actttggtagtgctcc----tggatcagaatcccaaataatgaatcagagcacatggagc 169 Query: 436 catctcattatc-----tttccgtaaagaaaaactatggtggactaactgatctttaaat 490 |||||| ||||| |||| || |||||||| ||||| ||| || ||||| ||| || Sbjct: 168 catctccttatcttatttttctgtcaagaaaaaatatggcggattagctgatatttctat 109 Query: 491 cagtttatgaaagagcccaatgc---nnnnnnntgcatgttgggtctttgaaacagttca 547 ||||| ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 108 cagttaatgaaagagcccaatgcaaaaaaaaaatgcatgttgggtctttgaaacagttca 49 Query: 548 aatcatttcgataataatccgtttgatctgtttta 582 ||||||| |||||||| ||||||||||||||| Sbjct: 48 gatcattttgataataaaaagtttgatctgtttta 14
>emb|AJ429647.1|MAF429647 Myrsine africana chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1482 Score = 165 bits (83), Expect = 2e-37 Identities = 203/245 (82%), Gaps = 4/245 (1%) Strand = Plus / Minus Query: 338 cagaggcagacctaagtcaaggtaatcctcctttgaaacactttggtattgctcctagat 397 |||||||||||||| ||||| ||| ||| |||||||||||||||| |||| || ||| Sbjct: 254 cagaggcagacctacgtcaaaataacccttttttgaaacactttggtcgtgctactggat 195 Query: 398 agatcataatacaaaaaatcaatcagagcacagggagccatctcattatctttccgtaaa 457 || | | |||| ||| ||||||||||| |||||||||||| |||| |||| || || Sbjct: 194 ----caaatttcaaataatgaatcagagcacggggagccatctctttatttttctgtcaa 139 Query: 458 gaaaaactatggtggactaactgatctttaaatcagtttatgaaagagcccaatgcnnnn 517 |||||| ||||| |||||| ||||| |||| ||||||| ||||||||||||||||| Sbjct: 138 gaaaaaatatggcggactagctgatatttatatcagttaatgaaagagcccaatgcaaaa 79 Query: 518 nnntgcatgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctg 577 |||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| Sbjct: 78 agatgcatgttgggtctttgaaacagttcggatcattttgataataataagtttgatctg 19 Query: 578 tttta 582 ||||| Sbjct: 18 tttta 14 Score = 77.8 bits (39), Expect = 4e-11 Identities = 90/107 (84%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| |||| |||| | | | |||||||||| ||||||| |||||| |||| || Sbjct: 415 ttgataaggtgaatacccagtctattcaatgctaggcataatgagtataaggacctcaaa 356 Query: 231 aaaacttcttttcgttctatgaactttaaggtgtatgaagtctcata 277 || ||||||||| |||||||||||||||||||| |||| ||||| Sbjct: 355 aatttctcttttcgtcctatgaactttaaggtgtataaagtttcata 309
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 161 bits (81), Expect = 3e-36 Identities = 296/364 (81%), Gaps = 12/364 (3%) Strand = Plus / Minus Query: 220 agggcctccaaaaaacttcttttcgttctatgaactttaaggtgtatgaagtctcatagt 279 |||||||| |||||| ||||||||| ||||||||||||||||||||||||| ||||| | Sbjct: 51184 agggcctcaaaaaaatctcttttcgtcctatgaactttaaggtgtatgaagtttcatatt 51125 Query: 280 taactcttgcagtggaacgatagagactccatttcacttaggttgatttaatttagacca 339 | | | || ||| || ||||||||||| ||||||||||||||| ||| ||| ||| Sbjct: 51124 tgattttta-agtagagcgatagagacttcatttcacttaggtt-----aatctaggcca 51071 Query: 340 gaggcagacctaagtcaaggtaatcctcctttgaaacactttggtattgctcctagatag 399 |||||||||||| |||||| ||| || |||| |||| ||||||||| || |||| || Sbjct: 51070 gaggcagacctacgtcaagataacccccctt-gaaaaactttggtagtgttcct-ga--- 51016 Query: 400 atcataatacaaaaaatcaatcagagcacagggagccatctcattatctttccgtaaaga 459 ||| |||| | | ||| | |||||||||| |||||||||| |||| |||| || || | Sbjct: 51015 atctgaataaacataatgactcagagcacatggagccatcttcttatttttctgtcaaaa 50956 Query: 460 aaaactatggtggactaactgatctttaaatcagtttatgaaagagcccaatgcnnnnnn 519 | || |||| |||||| ||||| ||| ||||||| ||||||||||||||||| Sbjct: 50955 ataaaaatggcggactagctgatatttctatcagttaatgaaagagcccaatgcacaaaa 50896 Query: 520 n-tgcatgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgt 578 ||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| Sbjct: 50895 aatgcatgttgggtctttgaaacagttcagatcattttgataataataagtttgatctgt 50836 Query: 579 ttta 582 |||| Sbjct: 50835 ttta 50832
>gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nbxb0032I20, complete sequence Length = 144651 Score = 161 bits (81), Expect = 3e-36 Identities = 93/97 (95%) Strand = Plus / Minus Query: 294 gaacgatagagactccatttcacttaggttgatttaatttagaccagaggcagacctaag 353 |||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||| Sbjct: 35631 gaacgatagagactccatttaacttaggttgatttaatttaggccggaggcagacctaag 35572 Query: 354 tcaaggtaatcctcctttgaaacactttggtattgct 390 ||||||||||||| ||||||||||||||||||||||| Sbjct: 35571 tcaaggtaatccttctttgaaacactttggtattgct 35535
>emb|AJ429727.1|HAN429727 Helianthus annuus chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1474 Score = 161 bits (81), Expect = 3e-36 Identities = 296/364 (81%), Gaps = 12/364 (3%) Strand = Plus / Minus Query: 220 agggcctccaaaaaacttcttttcgttctatgaactttaaggtgtatgaagtctcatagt 279 |||||||| |||||| ||||||||| ||||||||||||||||||||||||| ||||| | Sbjct: 366 agggcctcaaaaaaatctcttttcgtcctatgaactttaaggtgtatgaagtttcatatt 307 Query: 280 taactcttgcagtggaacgatagagactccatttcacttaggttgatttaatttagacca 339 | | | || ||| || ||||||||||| ||||||||||||||| ||| ||| ||| Sbjct: 306 tgattttta-agtagagcgatagagacttcatttcacttaggtt-----aatctaggcca 253 Query: 340 gaggcagacctaagtcaaggtaatcctcctttgaaacactttggtattgctcctagatag 399 |||||||||||| |||||| ||| || |||| |||| ||||||||| || |||| || Sbjct: 252 gaggcagacctacgtcaagataaccccccttggaaa-actttggtagtgttcct-ga--- 198 Query: 400 atcataatacaaaaaatcaatcagagcacagggagccatctcattatctttccgtaaaga 459 ||| |||| | | ||| | |||||||||| |||||||||| |||| |||| || || | Sbjct: 197 atctgaataaacataatgactcagagcacatggagccatcttcttatttttctgtcaaaa 138 Query: 460 aaaactatggtggactaactgatctttaaatcagtttatgaaagagcccaatgcnnnnnn 519 | || |||| |||||| ||||| ||| ||||||| ||||||||||||||||| Sbjct: 137 ataaaaatggcggactagctgatatttctatcagttaatgaaagagcccaatgcacaaaa 78 Query: 520 n-tgcatgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgt 578 ||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| Sbjct: 77 aatgcatgttgggtctttgaaacagttcagatcattttgataataataagtttgatctgt 18 Query: 579 ttta 582 |||| Sbjct: 17 ttta 14
>emb|AJ429640.1|AKO429640 Actinidia kolomikta chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1485 Score = 161 bits (81), Expect = 3e-36 Identities = 205/247 (82%), Gaps = 5/247 (2%) Strand = Plus / Minus Query: 337 ccagaggcagacctaagtcaaggtaatcctcctttgaaacactttggtattgctcctaga 396 ||||||||||||||| |||||| ||| ||| | ||||||||||||||| ||||||| || Sbjct: 256 ccagaggcagacctacgtcaagataacccttttctgaaacactttggtagtgctcctgga 197 Query: 397 tagatcataatacaaaaaatcaatcagagcacagggagccatctcattatctttccgtaa 456 | || |||||||| ||| |||||||||||| |||||||||| || | |||| | | Sbjct: 196 t----caaaatacaaataatgaatcagagcacaaggagccatcttcttctttttctgcca 141 Query: 457 agaaaaactatggtggactaactgatctttaaatcagtttatgaaagagcccaatgc-nn 515 ||||||| ||||| ||||| ||||| |||| ||||||| ||||||||||||||||| Sbjct: 140 agaaaaaatatggcggactggctgatatttatatcagttaatgaaagagcccaatgcaaa 81 Query: 516 nnnnntgcatgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatc 575 |||||||||||||||||||||||||| ||||||| |||||||||| |||||||| Sbjct: 80 aaaaatgcatgttgggtctttgaaacagttcggatcattttgataataatcagtttgatc 21 Query: 576 tgtttta 582 ||||||| Sbjct: 20 tgtttta 14 Score = 85.7 bits (43), Expect = 1e-13 Identities = 91/107 (85%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 ||||||||||||||| |||| | | |||||||||| ||||||| |||||| |||| | Sbjct: 416 ttgataaggtaaatacccagtatattcaatgctaggcataatgagtataaggacctcaat 357 Query: 231 aaaacttcttttcgttctatgaactttaaggtgtatgaagtctcata 277 |||| ||||||||| |||||||||||||||||||| |||| ||||| Sbjct: 356 aaaatatcttttcgtcctatgaactttaaggtgtataaagtttcata 310 Score = 58.0 bits (29), Expect = 3e-05 Identities = 71/85 (83%) Strand = Plus / Minus Query: 16 atgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcatagattcgagag 75 ||||||| || | ||| |||||||||| |||||| |||||||||| |||| || ||| | Sbjct: 573 atgcaatcaaaagaattgatcttattgaaaaatcgatgtcttactccataactttgaggg 514 Query: 76 aataggagaacagtagcctgacaaa 100 || | ||||||| |||||||||||| Sbjct: 513 aacaagagaacaatagcctgacaaa 489
>emb|AJ429651.1|RGO429651 Roridula gorgonias chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1510 Score = 159 bits (80), Expect = 1e-35 Identities = 310/386 (80%), Gaps = 11/386 (2%) Strand = Plus / Minus Query: 198 aatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaacttt 257 |||||||||| ||||||| |||||| |||| |||||| ||||||||| |||||||||| Sbjct: 389 aatgctaggcataatgagtataaggacctcaaaaaaatatcttttcgtcttatgaacttt 330 Query: 258 aaggtgtatgaagtctcatagttaactcttgcagtggaacgatagagactccatttcact 317 ||||||||| |||| ||||| || | | || | |||||||||||||| |||| ||| Sbjct: 329 aaggtgtataaagtttcatatttgatttttag-gaagaacgatagagactttatttaact 271 Query: 318 taggttgatttaatttagaccagaggcagacctaagtcaaggtaatcctcctttgaaaca 377 ||||||| | || | ||||||||||||||| |||||| ||| ||| | ||||||| Sbjct: 270 taggttgctcta-----ggccagaggcagacctacgtcaagataacccttttctgaaaca 216 Query: 378 ctttggtattgctcctagatagatcataatacaaaaaatcaatcagagcacagggagcca 437 |||||||| | ||| | ||| || |||| ||| ||| ||||||||||| |||||||| Sbjct: 215 ctttggtagtactcttggat----caaaataaaaataatgaatcagagcacggggagcca 160 Query: 438 tctcattatctttccgtaaagaaaaactatggtggactaactgatctttaaatcagttta 497 |||| |||| |||| || |||||||| ||||| | ||| | ||| ||| ||||||| | Sbjct: 159 tctccttatttttctgtcaagaaaaaatatggcgtactggcggatatttcgatcagttaa 100 Query: 498 tgaaagagcccaatgcnnnnnnn-tgcatgttgggtctttgaaacagttcaaatcatttc 556 |||||||||||| ||| |||||||||||||||||||||||||| ||||||| Sbjct: 99 tgaaagagcccattgcaaaaaaaatgcatgttgggtctttgaaacagttcggatcatttt 40 Query: 557 gataataatccgtttgatctgtttta 582 |||||||||| ||||||||||||||| Sbjct: 39 gataataatcagtttgatctgtttta 14 Score = 58.0 bits (29), Expect = 3e-05 Identities = 71/85 (83%) Strand = Plus / Minus Query: 16 atgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcatagattcgagag 75 ||||||| || | ||| |||||||||| |||||| |||||||||| |||| || ||| | Sbjct: 569 atgcaatcaaaagaattgatcttattgaaaaatcgatgtcttactccataactttgaggg 510 Query: 76 aataggagaacagtagcctgacaaa 100 || | ||||||| |||||||||||| Sbjct: 509 aacaagagaacaatagcctgacaaa 485
>emb|AJ429701.1|VRI429701 Verbena rigida chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1491 Score = 157 bits (79), Expect = 5e-35 Identities = 317/393 (80%), Gaps = 18/393 (4%) Strand = Plus / Minus Query: 198 aatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaacttt 257 |||||||||| |||||| ||||| |||| ||||| || |||||||| ||||||||||| Sbjct: 396 aatgctaggccgaatgagtctaaggtcctcaaaaaatct-cttttcgtcctatgaacttt 338 Query: 258 aaggtgtatgaagtctcatagttaactcttgcagtggaacgatagagactccatttcact 317 |||||||||||||| ||||| | | | || || |||||||||||||| ||||| ||| Sbjct: 337 aaggtgtatgaagtttcatattggattttttaagccgaacgatagagacttcatttaact 278 Query: 318 taggttgatttaatttagaccagaggcagacctaagtcaaggtaatcct-cctttgaaac 376 || | ||| ||| ||||||||||||||| |||||| ||| || |||||||||| Sbjct: 277 ta-----aaaaaatctaggccagaggcagacctacgtcaagataaccccacctttgaaac 223 Query: 377 actttggtattgctcctagatagatcataatacaaaa-aatcaatcagagcacagggagc 435 ||||||||| ||||||| ||| || ||| | ||| ||| |||| ||||||| ||||| Sbjct: 222 actttggtagtgctcctggat----cagaatcccaaataatgaatccgagcacatggagc 167 Query: 436 catctcattatctt-----tccgtaaagaaaaactatggtggactaactgatctttaaat 490 |||||| ||||||| || || |||||||| ||||||||| |||||||||||| || Sbjct: 166 catctccttatcttctttttctgtcaagaaaaaatatggtggattaactgatctttctat 107 Query: 491 cagtttatgaaagagcccaatgc-nnnnnnntgcatgttgggtctttgaaacagttcaaa 549 ||||| ||||||||||||||||| ||||||||||||||||||||||||||| | Sbjct: 106 cagttaatgaaagagcccaatgcaaaaaaaatgcatgttgggtctttgaaacagttcaga 47 Query: 550 tcatttcgataataatccgtttgatctgtttta 582 |||||| |||||||| |||||| |||||||| Sbjct: 46 tcattttgataataagaagtttgagctgtttta 14
>emb|AJ429637.1|GRO429637 Grubbia rosmarinifolia chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1463 Score = 157 bits (79), Expect = 5e-35 Identities = 259/316 (81%), Gaps = 11/316 (3%) Strand = Plus / Minus Query: 198 aatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaacttt 257 |||||||||| ||||||| |||||| |||| |||||| ||||||||| ||||||||||| Sbjct: 393 aatgctaggcataatgagtataaggacctc-aaaaaatatcttttcgtcctatgaacttt 335 Query: 258 aaggtgtatgaagtctcatagttaactcttgcagtggaacgatagagactccatttcact 317 |||||||||||||| ||||| || | | || || || |||||||||| ||||| ||| Sbjct: 334 aaggtgtatgaagtttcatattttattttta-agcagagtgatagagacttcatttaact 276 Query: 318 taggttgatttaatttagaccagaggcagacctaagtcaaggtaatcctcctttgaaaca 377 ||| ||||| || | ||||||||||||||| |||||| ||| ||| ||||||||| Sbjct: 275 tagattgatcta-----ggccagaggcagacctacgtcaagataacccttttttgaaaca 221 Query: 378 ctttggtattgctcctagatagatcataatacaaaaaatcaatcagagcacagggagcca 437 |||||||| ||||||| ||| | ||| |||| ||| |||||||||||| ||||||| Sbjct: 220 ctttggtagtgctcctggat----ctgaatccaaataatgaatcagagcacatggagcca 165 Query: 438 tctcattatctttccgtaaagaaaaactatggtggactaactgatctttaaatcagttta 497 |||| ||| ||||| || |||||||| ||||| |||||| ||||| |||| |||||| | Sbjct: 164 tctccttagctttctgtcaagaaaaaatatggcggactagctgatatttatctcagttaa 105 Query: 498 tgaaagagcccaatgc 513 ||||| |||||||||| Sbjct: 104 tgaaaaagcccaatgc 89 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Minus Query: 521 tgcatgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgttt 580 |||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||| Sbjct: 75 tgcatgttgggtctttgaaacagttcggatcattttgataataaaaagtttgatctgttt 16 Query: 581 ta 582 || Sbjct: 15 ta 14 Score = 42.1 bits (21), Expect = 2.0 Identities = 69/85 (81%) Strand = Plus / Minus Query: 16 atgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcatagattcgagag 75 ||||||| || | ||| ||||||||| ||||| ||||||||||||||| || || | Sbjct: 575 atgcaatcaaaagaattgatcttattcagaaatcgatgtcttacttcataactttgaagg 516 Query: 76 aataggagaacagtagcctgacaaa 100 || | ||||||| |||||||||||| Sbjct: 515 aacacgagaacaatagcctgacaaa 491
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 153 bits (77), Expect = 8e-34 Identities = 332/413 (80%), Gaps = 16/413 (3%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| |||| |||| | | | |||||||||| ||||||| |||||| |||| || Sbjct: 53979 ttgataaggtgaatacccagtctattcaatgctaggcataatgagtataaggacctcaaa 53920 Query: 231 aaaacttcttttcgttctatgaactttaaggtgtatgaagtctcatagttaactcttgca 290 ||| || |||||||| ||||||||||||||||||||||||| ||||| || | | || | Sbjct: 53919 aaatct-cttttcgtcctatgaactttaaggtgtatgaagtttcatatttta-tttttaa 53862 Query: 291 gtggaacgatagagactccatttcacttaggttgatttaatttagaccagaggcagacct 350 | || ||||||||||| ||| | ||||||| ||||| ||| ||||||||| |||| Sbjct: 53861 gcagagcgatagagacttcatctaacttagg-----ttaatctaggccagaggcaaacct 53807 Query: 351 aagtcaaggtaatcctcctttgaaacactttggtattgctcctagatagatcataataca 410 | |||||| ||| || ||||||||||||||||||| || ||| | ||||| ||| || Sbjct: 53806 acgtcaagataa-ccccctttgaaacactttggtagtgttcc----tggatcagaattca 53752 Query: 411 aaaaatcaatcagagcacagggagccatctcattatctttccgtaaagaaaaactatggt 470 || ||| | |||||||||| ||||||||||| |||| |||| | ||||| ||||| Sbjct: 53751 aataatgactcagagcacatggagccatctccttatttttc---tattaaaaaatatggc 53695 Query: 471 ggactaactgatctttaaatcagtttatgaaagagcccaatgc-nnnnnnntgcatgttg 529 ||||| ||||| |||| ||||||| ||||||||||||||||| ||||||||| Sbjct: 53694 ggacttgctgatatttatatcagttaatgaaagagcccaatgcacaaaaaatgcatgttg 53635 Query: 530 ggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgtttta 582 ||||||||||||||||| ||||||| |||||||| ||||| ||||||||| Sbjct: 53634 ggtctttgaaacagttcggatcattttgataataaaaagtttggtctgtttta 53582 Score = 50.1 bits (25), Expect = 0.008 Identities = 70/85 (82%) Strand = Plus / Minus Query: 16 atgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcatagattcgagag 75 ||||||| |||| ||| ||| |||||| ||||| |||||||||| |||| || ||| | Sbjct: 54128 atgcaatcaacagaattgattttattgagaaatcgatgtcttactccataactttgaggg 54069 Query: 76 aataggagaacagtagcctgacaaa 100 || | ||||||| |||||||||||| Sbjct: 54068 aacaagagaacaatagcctgacaaa 54044
>emb|AJ429670.1|PBU429670 Plocosperma buxifolium chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1506 Score = 153 bits (77), Expect = 8e-34 Identities = 317/394 (80%), Gaps = 19/394 (4%) Strand = Plus / Minus Query: 198 aatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaacttt 257 |||||||||| ||||||| |||||| |||| ||||| || |||||||| ||||||||||| Sbjct: 397 aatgctaggcataatgagtataaggtcctcaaaaaatct-cttttcgtcctatgaacttt 339 Query: 258 aaggtgtatgaagtctcatagttaactcttgcagtggaacgatagagactccatttcact 317 |||||||||||||| ||||| || | || || |||||||||||||| ||||| ||| Sbjct: 338 aaggtgtatgaagtttcatattttcttttttaagcagaacgatagagacttcatttaact 279 Query: 318 taggttgatttaatttagaccagaggcagacctaagtcaaggtaatcct-cctttgaaac 376 ||||||||| || | ||| | ||||||||| |||||| ||| ||| |||||||||| Sbjct: 278 taggttgatcta-----ggccaaaagcagacctacgtcaagataaccctacctttgaaac 224 Query: 377 actttggtattgctcctagatagatcataatacaaaaaa-tcaatcagagcacagggagc 435 ||||| | | ||||||| ||| || ||| | ||| | | |||||||||||| ||||| Sbjct: 223 actttaggagtgctcctggat----cagaattccaaatactgaatcagagcacatggagc 168 Query: 436 catctcattatctt-----tccgtaaagaaaaactatggtggactaactgatctttaaat 490 |||||| ||||||| | | |||||||| ||||| |||||||| ||| ||| || Sbjct: 167 catctccttatcttatttttttatcaagaaaaaatatggcggactaacggatatttctat 108 Query: 491 cagtttatgaaagagcccaatgcnnnnnnn--tgcatgttgggtctttgaaacagttcaa 548 ||||| ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 107 cagttaatgaaagagcccaatgcaaaaaaaaatgcatgttgggtctttgaaacagttcag 48 Query: 549 atcatttcgataataatccgtttgatctgtttta 582 ||||||| ||||||||| ||||||||||||||| Sbjct: 47 atcattttgataataataagtttgatctgtttta 14
>emb|AJ429675.1|GSE429675 Gelsemium sempervirens chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1435 Score = 151 bits (76), Expect = 3e-33 Identities = 318/394 (80%), Gaps = 19/394 (4%) Strand = Plus / Minus Query: 198 aatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaacttt 257 |||||||||| ||||||| ||||| |||| ||||| || |||||| | ||||||||||| Sbjct: 397 aatgctaggcataatgagtctaaggccctcaaaaaatct-cttttcatcctatgaacttt 339 Query: 258 aaggtgtatgaagtctcatagttaactcttgcagtggaacgatagagactccatttcact 317 |||||||||||||| ||||| || | | | || |||||||||||||| |||| ||| Sbjct: 338 aaggtgtatgaagtttcatatttccttttggaagcagaacgatagagacttgatttaact 279 Query: 318 taggttgatttaatttagaccagaggcagacctaagtcaaggtaatcct-cctttgaaac 376 ||||||||| || | ||||||||||||||| |||||| ||| ||| || |||||| Sbjct: 278 taggttgatcta-----ggccagaggcagacctacgtcaagataaccctacccttgaaag 224 Query: 377 actttggtattgctcctagatagatcataatacaaaa-aatcaatcagagcacagggagc 435 ||||||||| ||||| ||||| || ||| | ||| ||| |||||||||||| ||||| Sbjct: 223 actttggtagtgctcttagat----cagaatcccaaataatgaatcagagcacatggagc 168 Query: 436 catctcattatctt-----tccgtaaagaaaaac-tatggtggactaactgatctttaaa 489 |||||| ||||||| || || |||||||| ||||| ||||| ||||| ||| | Sbjct: 167 catctccttatcttatttttctgtcaagaaaaaaatatggcagactagctgatatttcga 108 Query: 490 tcagtttatgaaagagcccaatgcnnnnnnn-tgcatgttgggtctttgaaacagttcaa 548 |||||| ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 107 tcagttaatgaaagagcccaatgcaaaaaaaatgcatgttgggtctttgaaacagttcag 48 Query: 549 atcatttcgataataatccgtttgatctgtttta 582 ||||||| |||||||| | ||||||||||||||| Sbjct: 47 atcattttgataataaacagtttgatctgtttta 14
>emb|AJ429720.1|PUN429720 Pittosporum undulatum chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1521 Score = 151 bits (76), Expect = 3e-33 Identities = 331/413 (80%), Gaps = 14/413 (3%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| |||| || ||| | | |||||||||| ||||||| |||||| |||| || Sbjct: 413 ttgataaggtgaatacccggcctattcaatgctaggcataatgagtataaggacctcaaa 354 Query: 231 aaaacttcttttcgttctatgaactttaaggtgtatgaagtctcatagttaactcttgca 290 |||| ||||||||| ||||||||||||||||||||||||| |||| || | | || | Sbjct: 353 aaaatctcttttcgtcctatgaactttaaggtgtatgaagtttcatctttga-tttttaa 295 Query: 291 gtggaacgatagagactccatttcacttaggttgatttaatttagaccagaggcagacct 350 | |||||||||||||| ||| | ||||||| ||||| ||| |||||||||||||| Sbjct: 294 gcagaacgatagagacttcatctaacttagg-----ttaatctaggccagaggcagacct 240 Query: 351 aagtcaaggtaatcctcctttgaaacactttggtattgctcctagatagatcataataca 410 | |||||| ||| || | ||||||||||||||||| || | | | ||||| ||| || Sbjct: 239 acgtcaagataa-ccccttttgaaacactttggtagtgttac----tggatcagaattca 185 Query: 411 aaaaatcaatcagagcacagggagccatctcattatctttccgtaaagaaaaactatggt 470 | ||| | |||||||||| ||||||||||| |||| |||| || ||||| ||||| Sbjct: 184 cataatgactcagagcacatggagccatctccttatttttc--tatcaaaaaaagatggt 127 Query: 471 ggactaactgatctttaaatcagtttatgaaagagcccaatgc-nnnnnnntgcatgttg 529 ||||| ||||| ||| ||||||| ||||||||||||||||| |||||||| Sbjct: 126 ggactggctgatatttctatcagttaatgaaagagcccaatgcacaaaaaacgcatgttg 67 Query: 530 ggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgtttta 582 ||||||||||| |||||| ||||||| ||||||||| ||||||||||||||| Sbjct: 66 ggtctttgaaagagttcagatcattttgataataataagtttgatctgtttta 14
>emb|AJ430389.1|TPA430389 Tetrachondra patagonica chloroplast tRNA-Val gene (partial), atpE gene (partial) and tRNA-Met gene Length = 1471 Score = 149 bits (75), Expect = 1e-32 Identities = 303/376 (80%), Gaps = 24/376 (6%) Strand = Plus / Minus Query: 198 aatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaacttt 257 |||||||||| ||||||| |||||| |||| |||||| ||||||||| ||||||||||| Sbjct: 370 aatgctaggcataatgagtataaggtcctcaaaaaaatctcttttcgtcctatgaacttt 311 Query: 258 aaggtgtatgaagtctcatagttaactcttgcagtggaacgatagagactccatttcact 317 |||||||||||||| ||||| || | | | | |||||||||||||| ||||| ||| Sbjct: 310 aaggtgtatgaagtttcatatttgatttt-----ttgaacgatagagacttcatttaact 256 Query: 318 taggttgatttaatttagaccagaggcagaccta----agtcaaggtaa-tcctcctttg 372 ||||||| || ||| ||||||||||||||| ||||||| ||| || || ||| Sbjct: 255 taggttg-----atctaggccagaggcagacctacgtcagtcaagataaccccacccttg 201 Query: 373 aaacactttggtattgctcctagatagatcataat-acaaaaaatcaatcagagcacagg 431 |||||||||||||||||||| | ||||| ||| |||| ||| |||||||||| | | Sbjct: 200 aaacactttggtattgctcc----tggatcagaatcccaaataatgaatcagagcaaatg 145 Query: 432 gagccatctcattatc---tttccgtaaagaaaaactatggtggactaactgatctttaa 488 ||||||| || ||||| |||| || |||||||| ||||| |||||||||| ||| Sbjct: 144 gagccatttccttatcttttttctgtcaagaaaaaatatggcaaactaactgatatttct 85 Query: 489 atcagtttatgaaagagcccaatgc-nnnnnnntgcatgttgggtctttgaaacagttca 547 ||||||| ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 84 atcagttaatgaaagagcccaatgcaaaaaaaatgcatgttgggtctttgaaacagttca 25 Query: 548 aatcatttcgataata 563 ||||||| ||||||| Sbjct: 24 gatcattttgataata 9
>emb|AJ429708.1|COB429708 Columellia oblonga chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1428 Score = 147 bits (74), Expect = 5e-32 Identities = 331/415 (79%), Gaps = 13/415 (3%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| |||| |||| | | | |||||||||| ||||||| |||||| |||| || Sbjct: 418 ttgataaggtgaatacccagtctattcaatgctaggcataatgagtataaggacctcaaa 359 Query: 231 aaaact---tcttttcgttctatgaactttaaggtgtatgaagtctcatagttaactctt 287 |||| ||||||||| ||||||||||||||||||||||||| ||||| || | | || Sbjct: 358 aaaaaaatctcttttcgtcctatgaactttaaggtgtatgaagtgtcatattttattttt 299 Query: 288 gcagtggaacgatagagactccatttcacttaggttgatttaatttagaccagaggcaga 347 || || ||||||||||| ||||| ||||||||| ||| ||| ||||||||||| Sbjct: 298 a-agcagagcgatagagacttcatttaacttaggtt-----aatctaggccagaggcaga 245 Query: 348 cctaagtcaaggtaatcctcctttgaaacactttggtattgctcctagatagatcataat 407 |||| |||||| ||| || || |||||||||||||||| || |||| || |||| ||| Sbjct: 244 cctacgtcaagataaccccccattgaaacactttggtagtgttcct-ga---atcagaat 189 Query: 408 acaaaaaatcaatcagagcacagggagccatctcattatctttccgtaaagaaaaactat 467 ||| ||| | ||||| ||| |||||||||| ||| ||||| | || ||||| || Sbjct: 188 taaaataatgactcagaacacgtggagccatctacttacctttctctgaaaaaaaaagat 129 Query: 468 ggtggactaactgatctttaaatcagtttatgaaagagcccaatgcnnnnnnntgcatgt 527 || ||||| ||||| |||| ||||||| ||||| ||||||||||| |||| || Sbjct: 128 ggcggactggctgatatttatatcagttaatgaaggagcccaatgcacaaaaatgcacgt 69 Query: 528 tgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgtttta 582 |||||||||||||||||||| ||||||| ||||||| | ||||||||||||||| Sbjct: 68 tgggtctttgaaacagttcagatcattttgataatactaagtttgatctgtttta 14 Score = 40.1 bits (20), Expect = 7.9 Identities = 56/68 (82%) Strand = Plus / Minus Query: 33 gatcttattgcaaaatcaatgtcttacttcatagattcgagagaataggagaacagtagc 92 |||||||||| ||||| |||||||||| ||| || ||| ||| | ||||||| |||| Sbjct: 552 gatcttattgagaaatcgatgtcttactccatgactttgagggaacaagagaacaatagc 493 Query: 93 ctgacaaa 100 |||||||| Sbjct: 492 ctgacaaa 485
>emb|AJ429696.1|SPA429696 Schlegelia parviflora chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1490 Score = 147 bits (74), Expect = 5e-32 Identities = 210/254 (82%), Gaps = 12/254 (4%) Strand = Plus / Minus Query: 337 ccagaggcagacctaagtcaaggtaatcct-cctttgaaacactttggtattgctcctag 395 ||||||||||||||| |||||| ||| || ||||||||||||||||||| ||||||| | Sbjct: 263 ccagaggcagacctacgtcaagataaccccacctttgaaacactttggtagtgctcctgg 204 Query: 396 atagatcataatacaaaa-aatcaatcagagcacagggagccatctcattatctt----- 449 || || ||| | ||| ||| |||||||||||| ||||||||||| ||||||| Sbjct: 203 at----cagaatcccaaataatgaatcagagcacatggagccatctctttatcttatttt 148 Query: 450 tccgtaaagaaaaactatggtggactaactgatctttaaatcagtttatgaaagagccca 509 || || |||||||| ||||||||| || ||||| ||| ||||||| ||||||||||||| Sbjct: 147 tctgtcaagaaaaaatatggtggattagctgatatttctatcagttaatgaaagagccca 88 Query: 510 atgcnnnnnnn-tgcatgttgggtctttgaaacagttcaaatcatttcgataataatccg 568 |||| ||||||||||||||||||||||||||| ||||||| ||||||||| | Sbjct: 87 atgcaaaaaaaatgcatgttgggtctttgaaacagttcaratcattttgataataataag 28 Query: 569 tttgatctgtttta 582 |||||||||||||| Sbjct: 27 tttgatctgtttta 14 Score = 91.7 bits (46), Expect = 2e-15 Identities = 104/122 (85%), Gaps = 1/122 (0%) Strand = Plus / Minus Query: 198 aatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaacttt 257 |||||||||| ||||||| |||||| |||| ||||| || |||||||| ||||||||||| Sbjct: 396 aatgctaggcataatgagtataaggtcctcaaaaaatct-cttttcgtcctatgaacttt 338 Query: 258 aaggtgtatgaagtctcatagttaactcttgcagtggaacgatagagactccatttcact 317 |||||||||||||| ||||| || | | || || |||||||||||||| ||||| ||| Sbjct: 337 aaggtgtatgaagtttcatatttgattttttaagccgaacgatagagacttcatttaact 278 Query: 318 ta 319 || Sbjct: 277 ta 276
>emb|AJ429698.1|MMO429698 Myoporum montanum chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1498 Score = 145 bits (73), Expect = 2e-31 Identities = 316/394 (80%), Gaps = 19/394 (4%) Strand = Plus / Minus Query: 198 aatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaacttt 257 |||||||||| ||||||| |||||| |||| ||||| || |||||||| ||||||||||| Sbjct: 397 aatgctaggcataatgagtataaggtcctcaaaaaatct-cttttcgtcctatgaacttt 339 Query: 258 aaggtgtatgaagtctcatagttaactcttgcagtggaacgatagagactccatttcact 317 |||||||||||||| ||||| || | | || || |||||||||||||| ||||| ||| Sbjct: 338 aaggtgtatgaagtttcatatttgattttttaagccgaacgatagagacttcatttaact 279 Query: 318 taggttgatttaatttagaccagaggcagacctaagtcaaggtaatcc--tcctttgaaa 375 | | | || ||| ||||||||||||||| |||||| ||| || ||||||||| Sbjct: 278 aa-----aaatgatctaggccagaggcagacctacgtcaagataaccccaccctttgaaa 224 Query: 376 cactttggtattgctcctagatagatcataat-acaaaaaatcaatcagagcacagggag 434 |||||||||| |||||| | ||||| ||| |||| ||| |||||||||||| |||| Sbjct: 223 cactttggtagtgctcc----tggatcagaatcccaaataatgaatcagagcacatggag 168 Query: 435 ccatctcattatc-----tttccgtaaagaaaaactatggtggactaactgatctttaaa 489 ||||||| ||||| ||| || |||||||| ||||||||| || ||| | ||| | Sbjct: 167 ccatctccttatcttatttttatgtcaagaaaaaatatggtggattagctgctatttcta 108 Query: 490 tcagtttatgaaagagcccaatgc-nnnnnnntgcatgttgggtctttgaaacagttcaa 548 |||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 107 tcagttaatgaaagagcccaatgcaaaaaaaatgcatgttgggtctttgaaacagttccg 48 Query: 549 atcatttcgataataatccgtttgatctgtttta 582 ||||||| |||||||| ||||||||||||||| Sbjct: 47 atcattttgataataaaaagtttgatctgtttta 14
>emb|AJ429634.1|DSI429634 Dipentodon sinicus chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1563 Score = 145 bits (73), Expect = 2e-31 Identities = 234/288 (81%), Gaps = 12/288 (4%) Strand = Plus / Minus Query: 298 gatagagactccatttcacttaggttgatttaatttagaccagaggcagacctaagtcaa 357 |||||||||||||||| |||||||||||| || | ||||| ||||||||| |||| Sbjct: 292 gatagagactccatttaacttaggttgatcta-----ggccagaagcagacctacgtcag 238 Query: 358 ggtaatcctcctttgaaacactttggtattgctcctagatagatcataatacaaaaaatc 417 | ||| ||| ||||||| |||||||||| ||||||| || |||||| | || ||| Sbjct: 237 gataacccttctttgaagcactttggtaatgctcctgtat----cataatccgaataatg 182 Query: 418 aatcagagcacagggagccatctcattatctttccgtaaagaaaaac-tatggtggacta 476 |||||||||||| |||||||||| ||||||||| || |||||||| |||||| |||| Sbjct: 181 aatcagagcacatggagccatcttcttatctttctgttaagaaaaaaatatggtagactg 122 Query: 477 actgatctttaaatcagtttatgaaagagcccaatgc--nnnnnnntgcatgttgggtct 534 |||||| |||| ||||||| ||||||||||||||||| ||| |||||||||| Sbjct: 121 actgatatttatatcagttaatgaaagagcccaatgcaaaaaaaaatgcmtgttgggtct 62 Query: 535 ttgaaacagttcaaatcatttcgataataatccgtttgatctgtttta 582 |||||| ||||| |||||||| ||||||||| ||| ||||||||||| Sbjct: 61 ttgaaagagttcgaatcattttgataataataagttcgatctgtttta 14 Score = 54.0 bits (27), Expect = 5e-04 Identities = 67/79 (84%), Gaps = 1/79 (1%) Strand = Plus / Minus Query: 198 aatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaacttt 257 |||||||||| ||| ||| |||||| |||| |||| || |||||| | |||||||| || Sbjct: 391 aatgctaggcataacgagtataaggacctcaaaaattct-cttttcttcctatgaacctt 333 Query: 258 aaggtgtatgaagtctcat 276 |||||||||||||| |||| Sbjct: 332 aaggtgtatgaagtttcat 314
>emb|AJ430390.1|MSP430390 Melanophylla sp. Thulin et al. 10282 chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1505 Score = 143 bits (72), Expect = 7e-31 Identities = 212/257 (82%), Gaps = 8/257 (3%) Strand = Plus / Minus Query: 327 ttaatttagaccagaggcagacctaagtcaaggtaatcctcctttgaaacactttggtat 386 ||||| ||| ||||||||||||||| |||||| ||| || ||||||||||||||||||| Sbjct: 263 ttaatctaggccagaggcagacctacgtcaagataa-ccccctttgaaacactttggtag 205 Query: 387 tgctcctagatagatcataatacaaaaaatcaatcagagcacagggagccatctcattat 446 || ||| | ||||| ||| |||| ||| | |||||||||| ||||||||||| |||| Sbjct: 204 tgttcc----tggatcagaattcaaataatgactcagagcacatggagccatctccttat 149 Query: 447 ctttccgtaaagaaaaactatggtggactaactgatctttaaatcagtttatgaaagagc 506 |||| || || ||||| |||| ||||| ||||| ||| ||||||| |||||||||| Sbjct: 148 ttttctgtcaaaaaaaa--atggcggactggctgatatttttatcagttaatgaaagagc 91 Query: 507 ccaatgc-nnnnnnntgcatgttgggtctttgaaacagttcaaatcatttcgataataat 565 ||||||| ||||||||||||||||||||||||||| ||||||| ||||||||| Sbjct: 90 ccaatgcacaaaaaatgcatgttgggtctttgaaacagttcagatcattttgataataat 31 Query: 566 ccgtttgatctgtttta 582 ||||||||||||||| Sbjct: 30 aagtttgatctgtttta 14 Score = 101 bits (51), Expect = 3e-18 Identities = 93/107 (86%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| |||| | || | ||| |||||||||| ||||||| |||||| |||| || Sbjct: 408 ttgataaggtgaataccaagtctactcaatgctaggcataatgagtataaggacctcaaa 349 Query: 231 aaaacttcttttcgttctatgaactttaaggtgtatgaagtctcata 277 |||| ||||||||| ||||||||||||||||||||||||| ||||| Sbjct: 348 aaaatctcttttcgtcctatgaactttaaggtgtatgaagtttcata 302 Score = 46.1 bits (23), Expect = 0.13 Identities = 99/124 (79%), Gaps = 4/124 (3%) Strand = Plus / Minus Query: 16 atgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcatagattcgagag 75 ||||||| || | ||| ||||||||| ||||| |||||||||| |||| || ||| | Sbjct: 556 atgcaatcaaaagaattgatcttattaagaaatcgatgtcttactccataactttgaggg 497 Query: 76 aataggagaacagtagcctgacaaacagtcggttcagtccgattcaggtgccaattcagg 135 || | ||||||| |||||||||||| ||||| ||||||||| |||||| ||| ||| Sbjct: 496 aacaagagaacaatagcctgacaaa----aggttcggtccgattcgggtgcccatttagg 441 Query: 136 tgcc 139 |||| Sbjct: 440 tgcc 437
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 141 bits (71), Expect = 3e-30 Identities = 186/223 (83%), Gaps = 6/223 (2%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| |||| |||| | | | |||||||||| ||||||| |||||| |||| || Sbjct: 54192 ttgataaggtgaatacccagtctattcaatgctaggcataatgagtataaggacctcaaa 54133 Query: 231 aaaacttcttttcgttctatgaactttaaggtgtatgaagtctcatagttaactcttgca 290 |||| ||||||||| |||||||||||||||||||||||| ||||| || | | || || Sbjct: 54132 aaaatctcttttcgtcatatgaactttaaggtgtatgaagtttcatatttgattttttca 54073 Query: 291 gtggaacgatagagactccatttcacttaggttgatttaatttagaccagaggcagacct 350 | |||||||||||||| ||||| |||||||||| || ||| |||||| ||||||| Sbjct: 54072 gcagaacgatagagacttcatttaacttaggttg-----atctaggccagagacagacct 54018 Query: 351 aagtcaaggtaat-cctcctttgaaacactttggtattgctcc 392 | |||||| |||| || ||||||||||||||||||| |||||| Sbjct: 54017 acgtcaagataatcccacctttgaaacactttggtaatgctcc 53975 Score = 105 bits (53), Expect = 2e-19 Identities = 147/179 (82%), Gaps = 5/179 (2%) Strand = Plus / Minus Query: 409 caaaaaatcaatcagagcacagggagccatctcattatcttt----ccgtaaagaaaaac 464 |||| ||| |||||||||||| |||||||| || |||||||| | || |||||||| Sbjct: 53974 caaataatgaatcagagcacatggagccatttccttatctttttttctgtcaagaaaaaa 53915 Query: 465 tatggtggactaactgatctttaaatcagtttatgaaagagcccaatgcnnnnnnn-tgc 523 |||| ||||||||||| |||| ||||||| ||||||||||||||||| ||| Sbjct: 53914 aatggcagactaactgatatttatatcagttaatgaaagagcccaatgcaaaaaaaatgc 53855 Query: 524 atgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgtttta 582 |||||||||||||||||||||||| ||||||| |||||||| |||||| |||||||| Sbjct: 53854 atgttgggtctttgaaacagttcagatcattttaataataataagtttgacctgtttta 53796
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 141 bits (71), Expect = 3e-30 Identities = 186/223 (83%), Gaps = 6/223 (2%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| |||| |||| | | | |||||||||| ||||||| |||||| |||| || Sbjct: 54190 ttgataaggtgaatacccagtctattcaatgctaggcataatgagtataaggacctcaaa 54131 Query: 231 aaaacttcttttcgttctatgaactttaaggtgtatgaagtctcatagttaactcttgca 290 |||| ||||||||| |||||||||||||||||||||||| ||||| || | | || || Sbjct: 54130 aaaatctcttttcgtcatatgaactttaaggtgtatgaagtttcatatttgattttttca 54071 Query: 291 gtggaacgatagagactccatttcacttaggttgatttaatttagaccagaggcagacct 350 | |||||||||||||| ||||| |||||||||| || ||| |||||| ||||||| Sbjct: 54070 gcagaacgatagagacttcatttaacttaggttg-----atctaggccagagacagacct 54016 Query: 351 aagtcaaggtaat-cctcctttgaaacactttggtattgctcc 392 | |||||| |||| || ||||||||||||||||||| |||||| Sbjct: 54015 acgtcaagataatcccacctttgaaacactttggtaatgctcc 53973 Score = 105 bits (53), Expect = 2e-19 Identities = 147/179 (82%), Gaps = 5/179 (2%) Strand = Plus / Minus Query: 409 caaaaaatcaatcagagcacagggagccatctcattatcttt----ccgtaaagaaaaac 464 |||| ||| |||||||||||| |||||||| || |||||||| | || |||||||| Sbjct: 53972 caaataatgaatcagagcacatggagccatttccttatctttttttctgtcaagaaaaaa 53913 Query: 465 tatggtggactaactgatctttaaatcagtttatgaaagagcccaatgcnnnnnnn-tgc 523 |||| ||||||||||| |||| ||||||| ||||||||||||||||| ||| Sbjct: 53912 aatggcagactaactgatatttatatcagttaatgaaagagcccaatgcaaaaaaaatgc 53853 Query: 524 atgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgtttta 582 |||||||||||||||||||||||| ||||||| |||||||| |||||| |||||||| Sbjct: 53852 atgttgggtctttgaaacagttcagatcattttaataataataagtttgacctgtttta 53794
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 141 bits (71), Expect = 3e-30 Identities = 186/223 (83%), Gaps = 6/223 (2%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| |||| |||| | | | |||||||||| ||||||| |||||| |||| || Sbjct: 54094 ttgataaggtgaatacccagtctattcaatgctaggcataatgagtataaggacctcaaa 54035 Query: 231 aaaacttcttttcgttctatgaactttaaggtgtatgaagtctcatagttaactcttgca 290 |||| ||||||||| |||||||||||||||||||||||| ||||| || | | || || Sbjct: 54034 aaaatctcttttcgtcatatgaactttaaggtgtatgaagtttcatattttattttttca 53975 Query: 291 gtggaacgatagagactccatttcacttaggttgatttaatttagaccagaggcagacct 350 | |||||||||||||| ||||| |||||||||| || ||| |||||| ||||||| Sbjct: 53974 gcagaacgatagagacttcatttaacttaggttg-----atctaggccagagacagacct 53920 Query: 351 aagtcaaggtaat-cctcctttgaaacactttggtattgctcc 392 | |||||| |||| || ||||||||||||||||||| |||||| Sbjct: 53919 acgtcaagataatcccacctttgaaacactttggtaatgctcc 53877 Score = 101 bits (51), Expect = 3e-18 Identities = 147/180 (81%), Gaps = 6/180 (3%) Strand = Plus / Minus Query: 409 caaaaaatcaatcagagcacagggagccatctcattatcttt----ccgtaaagaaaaac 464 |||| ||| |||||||||||| |||||||| || |||||||| | || |||||||| Sbjct: 53876 caaataatgaatcagagcacatggagccatttccttatctttttttctgtcaagaaaaaa 53817 Query: 465 tatggtggactaactgatctttaaatcagtttatgaaagagcccaatgcnnnnnnn--tg 522 |||| ||||||||||| |||| ||||||| ||||||||||||||||| || Sbjct: 53816 aatggcagactaactgatatttatatcagttaatgaaagagcccaatgcaaaaaaaaatg 53757 Query: 523 catgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgtttta 582 ||||||||||||||||||||||||| ||||||| |||||||| |||||||| |||||| Sbjct: 53756 catgttgggtctttgaaacagttcagatcattttaataataataagtttgatccgtttta 53697
>gb|K01727.1|TOBCPTGMV Tobacco (N.tabacum) chloroplast Met-tRNA, Val-tRNA-uac and flanks Length = 1106 Score = 141 bits (71), Expect = 3e-30 Identities = 186/223 (83%), Gaps = 6/223 (2%) Strand = Plus / Plus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| |||| |||| | | | |||||||||| ||||||| |||||| |||| || Sbjct: 531 ttgataaggtgaatacccagtctattcaatgctaggcataatgagtataaggacctcaaa 590 Query: 231 aaaacttcttttcgttctatgaactttaaggtgtatgaagtctcatagttaactcttgca 290 |||| ||||||||| |||||||||||||||||||||||| ||||| || | | || || Sbjct: 591 aaaatctcttttcgtcatatgaactttaaggtgtatgaagtttcatatttgattttttca 650 Query: 291 gtggaacgatagagactccatttcacttaggttgatttaatttagaccagaggcagacct 350 | |||||||||||||| ||||| |||||||||| || ||| |||||| ||||||| Sbjct: 651 gcagaacgatagagacttcatttaacttaggttg-----atctaggccagagacagacct 705 Query: 351 aagtcaaggtaat-cctcctttgaaacactttggtattgctcc 392 | |||||| |||| || ||||||||||||||||||| |||||| Sbjct: 706 acgtcaagataatcccacctttgaaacactttggtaatgctcc 748 Score = 105 bits (53), Expect = 2e-19 Identities = 147/179 (82%), Gaps = 5/179 (2%) Strand = Plus / Plus Query: 409 caaaaaatcaatcagagcacagggagccatctcattatcttt----ccgtaaagaaaaac 464 |||| ||| |||||||||||| |||||||| || |||||||| | || |||||||| Sbjct: 749 caaataatgaatcagagcacatggagccatttccttatctttttttctgtcaagaaaaaa 808 Query: 465 tatggtggactaactgatctttaaatcagtttatgaaagagcccaatgcnnnnnnn-tgc 523 |||| ||||||||||| |||| ||||||| ||||||||||||||||| ||| Sbjct: 809 aatggcagactaactgatatttatatcagttaatgaaagagcccaatgcaaaaaaaatgc 868 Query: 524 atgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgtttta 582 |||||||||||||||||||||||| ||||||| |||||||| |||||| |||||||| Sbjct: 869 atgttgggtctttgaaacagttcagatcattttaataataataagtttgacctgtttta 927
>emb|AJ429707.1|BAL429707 Brunia albiflora chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1491 Score = 139 bits (70), Expect = 1e-29 Identities = 212/257 (82%), Gaps = 6/257 (2%) Strand = Plus / Minus Query: 327 ttaatttagaccagaggcagacctaagtcaaggtaatcctcctttgaaacactttggtat 386 ||||| ||| || |||||||||||| |||||| ||| || | ||||||||||||||||| Sbjct: 265 ttaatctaggcccgaggcagacctacgtcaagataacccccttttgaaacactttggtag 206 Query: 387 tgctcctagatagatcataatacaaaaaatcaatcagagcacagggagccatctcattat 446 || |||| || |||| ||| |||| ||| | |||||||||| ||||||||||| |||| Sbjct: 205 tgttcct-ga---atcagaatccaaataatgactcagagcacatggagccatctccttat 150 Query: 447 ctttccgtaaagaaaaactatggtggactaactgatctttaaatcagtttatgaaagagc 506 |||| || || ||||| ||||| ||||| ||||| |||| ||||||| |||||||||| Sbjct: 149 ttttctgtcaaaaaaaa-tatggcggactggctgatatttatatcagttaatgaaagagc 91 Query: 507 ccaatgcnnnnnnn-tgcatgttgggtctttgaaacagttcaaatcatttcgataataat 565 ||||||| ||||||||||||||||||||||||| | ||||||| ||||||||| Sbjct: 90 ccaatgcacaaaaaatgcatgttgggtctttgaaacagtttagatcattttgataataat 31 Query: 566 ccgtttgatctgtttta 582 ||||||||||||||| Sbjct: 30 aagtttgatctgtttta 14 Score = 89.7 bits (45), Expect = 1e-14 Identities = 66/73 (90%) Strand = Plus / Minus Query: 198 aatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaacttt 257 |||||||||| ||||||| |||||| |||| |||||| ||||||||| ||||||||||| Sbjct: 380 aatgctaggcataatgagtataaggacctcaaaaaaatctcttttcgtcctatgaacttt 321 Query: 258 aaggtgtatgaag 270 ||||||||||||| Sbjct: 320 aaggtgtatgaag 308 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 16 atgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcata 65 ||||||| || | ||| |||||||||| ||||||||||||||||| |||| Sbjct: 560 atgcaatcaaaagaattgatcttattgaaaaatcaatgtcttactccata 511
>emb|AJ429672.1|AJA429672 Aucuba japonica chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1512 Score = 137 bits (69), Expect = 5e-29 Identities = 223/270 (82%), Gaps = 12/270 (4%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| |||| |||| | | | |||||||||| ||||||| |||||| |||| || Sbjct: 425 ttgataaggtgaatacccagtctattcaatgctaggcataatgagtataaggacctc-aa 367 Query: 231 aaaacttcttttcgttctatgaactttaaggtgtatgaagtctcatagttaactcttgca 290 |||| ||||||||| ||||||||||||||||||||||||| ||||| || | | || | Sbjct: 366 aaaatatcttttcgtcctatgaactttaaggtgtatgaagtttcatatttga-tttttaa 308 Query: 291 gtggaacgatagagactccatttcacttaggttgatttaatttagaccagaggcagacct 350 | || ||||||||||| ||||| |||||||||| || ||| |||||||||||||| Sbjct: 307 gcagagcgatagagacttcatttaacttaggttg-----atctaggccagaggcagacct 253 Query: 351 aagtcaaggtaatcctcctttgaaacactttggtattgctcctagatagatcataataca 410 | |||||| ||| || ||||||||||||||||||| |||||| | ||||| ||| || Sbjct: 252 acgtcaagataa-ccccctttgaaacactttggtagtgctcc----tggatcagaatcca 198 Query: 411 aaaaatcaatcagagcacagggagccatct 440 || ||| |||||||||||| |||||||||| Sbjct: 197 aataatgaatcagagcacatggagccatct 168 Score = 101 bits (51), Expect = 3e-18 Identities = 108/129 (83%), Gaps = 2/129 (1%) Strand = Plus / Minus Query: 456 aagaaaaactatggtggactaactgatctttaaatcagtttatgaaagagcccaatgcnn 515 |||||||| ||||| ||||| ||||| |||| ||||||| ||||||||||||||||| Sbjct: 142 aagaaaaaatatggcggactgtctgatatttatatcagttaatgaaagagcccaatgcaa 83 Query: 516 nnnnn--tgcatgttgggtctttgaaacagttcaaatcatttcgataataatccgtttga 573 ||||||||||||||||||||||||||| ||||||| ||||||||| ||| || Sbjct: 82 aaaaaaatgcatgttgggtctttgaaacagttcagatcattttgataataataagttkga 23 Query: 574 tctgtttta 582 ||||||||| Sbjct: 22 tctgtttta 14
>emb|AJ429691.1|SOR429691 Sesamum orientale chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1497 Score = 135 bits (68), Expect = 2e-28 Identities = 209/254 (82%), Gaps = 12/254 (4%) Strand = Plus / Minus Query: 337 ccagaggcagacctaagtcaaggtaatcct-cctttgaaacactttggtattgctcctag 395 ||||||||||||||| |||||| ||| || ||||||||||||||||||| ||||||| | Sbjct: 263 ccagaggcagacctacgtcaagataacccgacctttgaaacactttggtagtgctcctgg 204 Query: 396 atagatcataatacaaaa-aatcaatcagagcacagggagccatctcattatctt----- 449 || || ||| | ||| ||| |||||||||||| ||||||||||| ||||||| Sbjct: 203 at----cagaatcccaaataatgaatcagagcacatggagccatctccttatcttatttt 148 Query: 450 tccgtaaagaaaaactatggtggactaactgatctttaaatcagtttatgaaagagccca 509 || || |||||||| ||||||||| | ||||| ||| ||||||| ||||||||||||| Sbjct: 147 tctgtcaagaaaaaatatggtggattggctgatatttctatcagttaatgaaagagccca 88 Query: 510 atgcnnnnnnn-tgcatgttgggtctttgaaacagttcaaatcatttcgataataatccg 568 |||| ||||||||||||||||||||||||||| ||||||| ||||||||| | Sbjct: 87 atgcaaaaaaaatgcatgttgggtctttgaaacagttcagatcattttgataataataag 28 Query: 569 tttgatctgtttta 582 |||||||||||||| Sbjct: 27 tttgatctgtttta 14 Score = 87.7 bits (44), Expect = 4e-14 Identities = 72/80 (90%), Gaps = 1/80 (1%) Strand = Plus / Minus Query: 198 aatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaacttt 257 |||||||||| ||||||| |||||| |||| ||||| || |||||||| ||||||||||| Sbjct: 398 aatgctaggcataatgagtataaggtcctcaaaaaatct-cttttcgtcctatgaacttt 340 Query: 258 aaggtgtatgaagtctcata 277 |||||||||||||| ||||| Sbjct: 339 aaggtgtatgaagtttcata 320
>emb|AJ429687.1|OEU429687 Olea europaea chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1478 Score = 135 bits (68), Expect = 2e-28 Identities = 226/273 (82%), Gaps = 13/273 (4%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| |||| |||| ||| | |||||||||| ||||||| |||||| |||| || Sbjct: 413 ttgataaggtcaata-ccagtccattcaatgctaggcataatgagtataaggtcctcaaa 355 Query: 231 aaaacttcttttcgttctatgaactttaaggtgtatgaagtctcatagttaactcttgca 290 ||| || |||||||| ||||||||||||||||||||||||| ||||| || | | || | Sbjct: 354 aaatct-cttttcgtcctatgaactttaaggtgtatgaagtttcatattttattttttaa 296 Query: 291 gtggaacgatagagactccatttcacttaggttgatttaatttagaccagaggcagacct 350 | |||||||||||||| ||||| |||||||||||| || | |||||||||||||| Sbjct: 295 gccgaacgatagagacttcatttaacttaggttgatcta-----ggccagaggcagacct 241 Query: 351 aagtcaaggtaatcct-cctttgaaacactttggtattgctcctagatagatcataatac 409 | |||||| ||| || ||||||||||||||||||| ||||||| ||| || ||| | Sbjct: 240 acgtcaagataaccccacctttgaaacactttggtagtgctcctggat----cagaatcc 185 Query: 410 aaaa-aatcaatcagagcacagggagccatctc 441 ||| ||| |||||||||||| ||||||||||| Sbjct: 184 caaataatgaatcagagcacatggagccatctc 152 Score = 91.7 bits (46), Expect = 2e-15 Identities = 58/62 (93%) Strand = Plus / Minus Query: 521 tgcatgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgttt 580 ||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||| Sbjct: 75 tgcatgttgggtctttgaaacagttcagatcattttgataataataagtttgatctgttt 16 Query: 581 ta 582 || Sbjct: 15 ta 14
>emb|AJ429681.1|JMI429681 Jacaranda mimosifolia chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1499 Score = 135 bits (68), Expect = 2e-28 Identities = 209/254 (82%), Gaps = 12/254 (4%) Strand = Plus / Minus Query: 337 ccagaggcagacctaagtcaaggtaatcct-cctttgaaacactttggtattgctcctag 395 ||||||||||||||| |||||| ||| || ||||||||||||||||||| ||||||| | Sbjct: 263 ccagaggcagacctacgtcaagataaccccacctttgaaacactttggtagtgctcctgg 204 Query: 396 atagatcataatacaaaa-aatcaatcagagcacagggagccatctcattatctt----- 449 || || ||| | ||| ||| |||||||||||| ||||||||||| ||||||| Sbjct: 203 at----cagaatcccaaataatgaatcagagcacatggagccatctccttatcttatttt 148 Query: 450 tccgtaaagaaaaactatggtggactaactgatctttaaatcagtttatgaaagagccca 509 || || |||||||| ||||||||| | ||||| ||| ||||||| ||||||||||||| Sbjct: 147 tctgtcaagaaaaaatatggtggattggctgatatttctatcagttaatgaaagagccca 88 Query: 510 atgcnnnnnnn-tgcatgttgggtctttgaaacagttcaaatcatttcgataataatccg 568 |||| ||||||||||||||||||||||||||| ||||||| ||||||||| | Sbjct: 87 atgcaaaaaaaatgcatgttgggtctttgaaacagttcagatcattttgataataataag 28 Query: 569 tttgatctgtttta 582 |||||||||||||| Sbjct: 27 tttgatctgtttta 14 Score = 89.7 bits (45), Expect = 1e-14 Identities = 125/149 (83%), Gaps = 2/149 (1%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| |||| |||| ||| | |||||||||| ||||||| |||||| |||| || Sbjct: 422 ttgataaggtgaata-ccagtccattcaatgctaggcataatgagtataaggtcctcaaa 364 Query: 231 aaaacttcttttcgttctatgaactttaaggtgtatgaagtctcatagttaactcttgca 290 ||| || |||||||| |||||||||| |||||||||||||| ||||| || | | || | Sbjct: 363 aaatct-cttttcgtcctatgaacttgaaggtgtatgaagtttcatatttgattttttaa 305 Query: 291 gtggaacgatagagactccatttcactta 319 | |||||||||||||| ||||| ||||| Sbjct: 304 gccgaacgatagagacttcatttaactta 276
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 133 bits (67), Expect = 7e-28 Identities = 185/223 (82%), Gaps = 6/223 (2%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| |||| |||| | | | |||||||||| ||||||| |||||| |||| || Sbjct: 53834 ttgataaggtgaatacccagtctattcaatgctaggcataatgagtataaggacctcaaa 53775 Query: 231 aaaacttcttttcgttctatgaactttaaggtgtatgaagtctcatagttaactcttgca 290 |||| |||||||||| |||||||||||||||||||||||| ||||| || | | || | Sbjct: 53774 aaaatctcttttcgttatatgaactttaaggtgtatgaagtttcatatttgattttttaa 53715 Query: 291 gtggaacgatagagactccatttcacttaggttgatttaatttagaccagaggcagacct 350 | |||||||||||||| ||||| |||||||||| || ||| |||||| ||||||| Sbjct: 53714 gcagaacgatagagacttcatttaacttaggttg-----atctaggccagagacagacct 53660 Query: 351 aagtcaaggtaat-cctcctttgaaacactttggtattgctcc 392 | |||||| |||| || || |||||||||||||||| |||||| Sbjct: 53659 acgtcaagataatcccacccttgaaacactttggtaatgctcc 53617 Score = 109 bits (55), Expect = 1e-20 Identities = 148/180 (82%), Gaps = 6/180 (3%) Strand = Plus / Minus Query: 409 caaaaaatcaatcagagcacagggagccatctcattatcttt----ccgtaaagaaaaac 464 |||| ||| |||||||||||| |||||||| || |||||||| | || |||||||| Sbjct: 53616 caaataatgaatcagagcacatggagccatttccttatctttttttctgtcaagaaaaaa 53557 Query: 465 tatggtggactaactgatctttaaatcagtttatgaaagagcccaatgcnnnnnnn--tg 522 |||| ||||||||||| |||| ||||||| ||||||||||||||||| || Sbjct: 53556 aatggcagactaactgatatttatatcagttaatgaaagagcccaatgcaaaaaaaaatg 53497 Query: 523 catgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgtttta 582 ||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||| Sbjct: 53496 catgttgggtctttgaaacagttcagatcattttaataataataagtttgatctgtttta 53437
>emb|AJ429725.1|AMA429725 Alseuosmia macrophylla chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1501 Score = 133 bits (67), Expect = 7e-28 Identities = 334/416 (80%), Gaps = 17/416 (4%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| |||| |||| | | | |||||||||| ||||||| |||||| |||| || Sbjct: 416 ttgataaggtgaatacccagtctattcaatgctaggcataatgagtataaggacctcaaa 357 Query: 231 aaaactt--cttttcgttctatgaactttaaggtgtatgaagtctcatagttaactcttg 288 |||| | |||||||| ||||||||||||||||||||||||| ||||| || | | || Sbjct: 356 aaaaaatatcttttcgtcctatgaactttaaggtgtatgaagtttcatatttga-ttttt 298 Query: 289 cagtggaacgatagagactccatttcacttaggttgatttaatttagaccagaggcagac 348 || || ||||||||||| ||||| ||||||| ||||| ||| |||||||||||| Sbjct: 297 aagcagagcgatagagacttcatttaacttagg-----ttaatctaggccagaggcagac 243 Query: 349 ctaagtcaaggtaatcctcctttgaaacactttggtattgctcctagatagatcataata 408 ||| |||||| ||| || || |||||| ||||||||| || |||| || ||| ||| Sbjct: 242 ctacgtcaagataa-ccccccttgaaaaactttggtagtgttcct-ga---atctgaatc 188 Query: 409 caaaaaatcaatcagagcacagggagccatctcattatctttccgt-aaagaaaaactat 467 |||| ||| | |||||||||| ||||||||||| | | |||| || ||| ||||| ||| Sbjct: 187 caaataatgactcagagcacatggagccatctcct--tttttctgtcaaaaaaaaaatat 130 Query: 468 ggtggactaactgatctttaaatcagtttatgaaagagcccaatgc-nnnnnnntgcatg 526 || ||||| ||||| |||| ||||||| ||||| ||||||||||| |||||| Sbjct: 129 ggcggacttgctgatatttatatcagttaatgaaggagcccaatgcacaaaaaatgcatg 70 Query: 527 ttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgtttta 582 ||||||||||||||||| || ||||||| ||||||||| ||||||||||||||| Sbjct: 69 ttgggtctttgaaacaggccagatcattttgataataataagtttgatctgtttta 14 Score = 56.0 bits (28), Expect = 1e-04 Identities = 91/112 (81%), Gaps = 5/112 (4%) Strand = Plus / Minus Query: 16 atgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcatagattcgagag 75 ||||||| || ||||| |||||||||| ||||| |||||||||| |||| || ||| | Sbjct: 568 atgcaatcaaaataattgatcttattgagaaatcgatgtcttactccataactttgaggg 509 Query: 76 aataggagaacagtagcctgacaaacagtcggttcagtccgattcaggtgcc 127 || | ||||||| ||||||| |||| ||||| |||||||||||||||| Sbjct: 508 aacaagagaacaatagcctgccaaa-----ggttcggtccgattcaggtgcc 462
>emb|AJ429656.1|PHI429656 Pterostyrax hispidus chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1533 Score = 133 bits (67), Expect = 7e-28 Identities = 178/216 (82%), Gaps = 6/216 (2%) Strand = Plus / Minus Query: 369 tttgaaacactttggtattgctcctagatagatcataatacaaaaaatcaatcagagcac 428 ||||||||||||||||| ||||||| ||| || || |||| ||| ||||||||||| Sbjct: 225 tttgaaacactttggtagtgctcctggat----caaaacccaaataatgaatcagagcac 170 Query: 429 agggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatctttaa 488 |||||||||||| |||| |||| || |||||||| ||||| ||||| ||||| |||| Sbjct: 169 ggggagccatctccttatttttctgtcaagaaaaaatatggcggactggctgatatttat 110 Query: 489 atcagtttatgaaagagcccaatgc--nnnnnnntgcatgttgggtctttgaaacagttc 546 ||||||| ||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 109 atcagttaatgaaagagcccagtgcaaaaaaaaatgcatgttgggtctttgaaacagttc 50 Query: 547 aaatcatttcgataataatccgtttgatctgtttta 582 ||||||| ||||| |||| ||||||||||||||| Sbjct: 49 ggatcattttgataaaaatcagtttgatctgtttta 14 Score = 93.7 bits (47), Expect = 6e-16 Identities = 92/107 (85%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| |||| |||| | | | |||||||||| ||||||| |||||| |||| || Sbjct: 429 ttgataaggtgaatacccagtctattcaatgctaggcataatgagtataaggacctcaaa 370 Query: 231 aaaacttcttttcgttctatgaactttaaggtgtatgaagtctcata 277 |||| ||||||||| |||||||||||||||||||| |||| ||||| Sbjct: 369 aaaatctcttttcgtcctatgaactttaaggtgtataaagtttcata 323 Score = 40.1 bits (20), Expect = 7.9 Identities = 56/68 (82%) Strand = Plus / Minus Query: 33 gatcttattgcaaaatcaatgtcttacttcatagattcgagagaataggagaacagtagc 92 ||||||||| |||||| |||||||||| ||| || ||| ||| | ||||||| |||| Sbjct: 565 gatcttattaaaaaatcgatgtcttactctataactttgagggaacaagagaacaatagc 506 Query: 93 ctgacaaa 100 |||||||| Sbjct: 505 ctgacaaa 498
>emb|AJ429655.1|HCA429655 Halesia carolina chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1491 Score = 133 bits (67), Expect = 7e-28 Identities = 176/214 (82%), Gaps = 6/214 (2%) Strand = Plus / Minus Query: 369 tttgaaacactttggtattgctcctagatagatcataatacaaaaaatcaatcagagcac 428 ||||||||||||||||| ||||||| ||| || || |||| ||| ||||||||||| Sbjct: 225 tttgaaacactttggtagtgctcctggat----caaaacccaaataatgaatcagagcac 170 Query: 429 agggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatctttaa 488 |||||||||||| |||| |||| || |||||||| ||||| ||||| |||||| |||| Sbjct: 169 ggggagccatctccttatttttctgtcaagaaaaaatatggcggactgactgatatttat 110 Query: 489 atcagtttatgaaagagcccaatgc--nnnnnnntgcatgttgggtctttgaaacagttc 546 ||||||| ||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 109 atcagttaatgaaagagcccagtgcaaaaaaaaatgcatgttgggtctttgaaacagttc 50 Query: 547 aaatcatttcgataataatccgtttgatctgttt 580 ||||||| ||||| |||| ||| ||||||||| Sbjct: 49 ggatcatttggataaaaatcagttkgatctgttt 16 Score = 93.7 bits (47), Expect = 6e-16 Identities = 92/107 (85%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| |||| |||| | | | |||||||||| ||||||| |||||| |||| || Sbjct: 429 ttgataaggtgaatacccagtctattcaatgctaggcataatgagtataaggacctcaaa 370 Query: 231 aaaacttcttttcgttctatgaactttaaggtgtatgaagtctcata 277 |||| ||||||||| |||||||||||||||||||| |||| ||||| Sbjct: 369 aaaatctcttttcgtcctatgaactttaaggtgtataaagtttcata 323 Score = 40.1 bits (20), Expect = 7.9 Identities = 56/68 (82%) Strand = Plus / Minus Query: 33 gatcttattgcaaaatcaatgtcttacttcatagattcgagagaataggagaacagtagc 92 ||||||||| |||||| |||||||||| ||| || ||| ||| | ||||||| |||| Sbjct: 556 gatcttattaaaaaatcgatgtcttactctataactttgagggaacaagagaacaatagc 497 Query: 93 ctgacaaa 100 |||||||| Sbjct: 496 ctgacaaa 489
>emb|AJ429653.1|SPU429653 Sarracenia purpurea chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1500 Score = 133 bits (67), Expect = 7e-28 Identities = 203/247 (82%), Gaps = 9/247 (3%) Strand = Plus / Minus Query: 340 gaggcagacctaagtcaaggtaatcctcctttgaaacactttggtattgctcctagatag 399 |||||||||||| |||||| ||| ||| ||||||||||||||||| |||||| | | Sbjct: 255 gaggcagacctacgtcaagataacccttttttgaaacactttggtagtgctcc----tgg 200 Query: 400 atcataatacaaaaaatcaatcagagcacagggagccatctc---attatctttccgtaa 456 |||| |||| ||| ||| ||||||||||| |||||||||||| ||| | |||| || | Sbjct: 199 atcaaaataaaaataatgaatcagagcacggggagccatctccttattttttttctgtca 140 Query: 457 agaaaaactatggtggactaactgatctttaaatcagtttatgaaagagcccaatgc-nn 515 ||||||| ||||| ||||| ||||| |||| ||||||| ||||||||||||||||| Sbjct: 139 agaaaaa-tatggcggactggctgatatttatatcagttaatgaaagagcccaatgcaaa 81 Query: 516 nnnnntgcatgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatc 575 |||||||||||||||||||||||||| ||||||| |||||||| |||||||| Sbjct: 80 aaaaatgcatgttgggtctttgaaacagttcggatcattttgataataagaagtttgatc 21 Query: 576 tgtttta 582 ||||||| Sbjct: 20 tgtttta 14 Score = 77.8 bits (39), Expect = 4e-11 Identities = 90/107 (84%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| |||| |||| | | | |||| ||||| ||||||| |||| | |||| || Sbjct: 418 ttgataaggtgaatacccagtctattcaatgttaggcataatgagtataaagacctcaaa 359 Query: 231 aaaacttcttttcgttctatgaactttaaggtgtatgaagtctcata 277 |||| ||||||||| |||||||||||||||||||| |||| ||||| Sbjct: 358 aaaatctcttttcgtcctatgaactttaaggtgtataaagtttcata 312 Score = 50.1 bits (25), Expect = 0.008 Identities = 70/85 (82%) Strand = Plus / Minus Query: 16 atgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcatagattcgagag 75 ||||||| || | ||| |||||||||| |||||| |||||||||| |||| || ||| | Sbjct: 571 atgcaatcaaaagaattgatcttattgaaaaatcgatgtcttactccataactttgaggg 512 Query: 76 aataggagaacagtagcctgacaaa 100 | | ||||||| |||||||||||| Sbjct: 511 agcaagagaacaatagcctgacaaa 487
>emb|AJ429650.1|PVE429650 Primula veris chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1471 Score = 133 bits (67), Expect = 7e-28 Identities = 200/245 (81%), Gaps = 5/245 (2%) Strand = Plus / Minus Query: 337 ccagaggcagacctaagtcaaggtaatcctcctttgaaacactttggtattgctcctaga 396 ||||||||||||||| |||||| ||| ||| ||||||| ||||||||| |||| || || Sbjct: 256 ccagaggcagacctacgtcaagataacccttttttgaaatactttggtagtgctactgga 197 Query: 397 tagatcataatacaaaaaatcaatcagagcacagggagccatctcattatctttccgtaa 456 | | | | |||| ||| || |||||||| |||||||||||| |||| |||| || | Sbjct: 196 tcca----atttcaaataatgaagcagagcacggggagccatctctttatttttctgtca 141 Query: 457 agaaaaactatggtggactaactgatctttaaatca-gtttatgaaagagcccaatgcnn 515 ||||||| ||||| ||| || ||||| |||| |||| ||| ||||||||||||||||| Sbjct: 140 agaaaaaatatggcggattagctgatatttatatcaagttaatgaaagagcccaatgcaa 81 Query: 516 nnnnntgcatgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatc 575 |||||||||||||||||||||||||| |||||||| |||||||| |||||||| Sbjct: 80 aaaaatgcatgttgggtctttgaaacagttcgaatcattttgataataagaagtttgatc 21 Query: 576 tgttt 580 ||||| Sbjct: 20 tgttt 16 Score = 69.9 bits (35), Expect = 9e-09 Identities = 89/107 (83%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| |||| |||| | | | |||||||||| ||||||| |||||| |||| || Sbjct: 417 ttgataaggtgaatacccagtctattcaatgctaggcataatgagtataaggacctcaaa 358 Query: 231 aaaacttcttttcgttctatgaactttaaggtgtatgaagtctcata 277 || ||||||||| ||||||||||||||||||| |||| ||||| Sbjct: 357 aatgtctcttttcgtcttatgaactttaaggtgtataaagtttcata 311
>dbj|D13100.1|RICMT04 Oryza sativa (japonica cultivar-group) mitochondrial pseudogene for tRNA-Val, clone:pMTVSCT7 Length = 214 Score = 133 bits (67), Expect = 7e-28 Identities = 106/115 (92%), Gaps = 3/115 (2%) Strand = Plus / Minus Query: 282 actcttgcagtggaacgatagagactcc-atttcacttaggttg-atttaatttagacca 339 |||||||||| |||||||||||||||| |||| |||||||||| ||||||||||| || Sbjct: 190 actcttgcagcagaacgatagagactcccatttaacttaggttggatttaatttaggccg 131 Query: 340 gaggcagacctaagtc-aaggtaatcctcctttgaaacactttggtattgctcct 393 |||||||||||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct: 130 gaggcagacctaagtccaaggtaatccttctttgaaacactttggtattgctcct 76
>emb|AM116779.1| Maxburretia rupicola plastid rps16 gene, intron 1, specimen voucher C. E. Lewis 02-080 (FTG) Length = 954 Score = 131 bits (66), Expect = 3e-27 Identities = 113/127 (88%), Gaps = 5/127 (3%) Strand = Plus / Plus Query: 368 ctttgaaacactttggtattgctcctagatagatcataatacaaaaaatcaatcagagca 427 |||||||||||||||||||||||||||||| || |||||||| || |||||||||| Sbjct: 204 ctttgaaacactttggtattgctcctagat----cagaatacaaatgatgaatcagagca 259 Query: 428 cagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatcttta 487 || |||||||||||||||| || | ||||||||||| ||||||||||||||||||||||| Sbjct: 260 catggagccatctcattattttcctgtaaagaaaaa-tatggtggactaactgatcttta 318 Query: 488 aatcagt 494 |||||| Sbjct: 319 catcagt 325
>emb|AM116778.1| Rhapidophyllum hystrix plastid rps16 gene, intron 1, specimen voucher 013-67-01301 (K) Length = 952 Score = 131 bits (66), Expect = 3e-27 Identities = 113/127 (88%), Gaps = 5/127 (3%) Strand = Plus / Plus Query: 368 ctttgaaacactttggtattgctcctagatagatcataatacaaaaaatcaatcagagca 427 |||||||||||||||||||||||||||||| || |||||||| || |||||||||| Sbjct: 204 ctttgaaacactttggtattgctcctagat----cagaatacaaatgatgaatcagagca 259 Query: 428 cagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatcttta 487 || |||||||||||||||| || | ||||||||||| ||||||||||||||||||||||| Sbjct: 260 catggagccatctcattattttcctgtaaagaaaaa-tatggtggactaactgatcttta 318 Query: 488 aatcagt 494 |||||| Sbjct: 319 catcagt 325
>emb|AJ404925.1|TFO404925 Trachycarpus fortunei chloroplast partial rps16 gene for ribosomal protein S16, exon 2 Length = 988 Score = 131 bits (66), Expect = 3e-27 Identities = 113/127 (88%), Gaps = 5/127 (3%) Strand = Plus / Plus Query: 368 ctttgaaacactttggtattgctcctagatagatcataatacaaaaaatcaatcagagca 427 |||||||||||||||||||||||||||||| || |||||||| || |||||||||| Sbjct: 237 ctttgaaacactttggtattgctcctagat----cagaatacaaatgatgaatcagagca 292 Query: 428 cagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatcttta 487 || |||||||||||||||| || | ||||||||||| ||||||||||||||||||||||| Sbjct: 293 catggagccatctcattattttcctgtaaagaaaaa-tatggtggactaactgatcttta 351 Query: 488 aatcagt 494 |||||| Sbjct: 352 catcagt 358
>emb|AJ429678.1|LGR429678 Luculia gratissima chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1514 Score = 131 bits (66), Expect = 3e-27 Identities = 184/222 (82%), Gaps = 6/222 (2%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| ||||||||| | | | |||||||||| ||||||| |||||| |||| || Sbjct: 427 ttgataaggtgaatatccagtctattcaatgctaggcataatgagtataaggacctcaaa 368 Query: 231 aaaacttcttttcgttctatgaactttaaggtgtatgaagtctcatagttaactcttgca 290 |||| ||||||||| ||||||||||||||||||||||||| ||||| || | | | | Sbjct: 367 aaaatctcttttcgtcctatgaactttaaggtgtatgaagtttcatatttcattttgtaa 308 Query: 291 gtggaacgatagagactccatttcacttaggttgatttaatttagaccagaggcagacct 350 | |||||||||||||| ||||| |||||||||| || ||| |||||||||||||| Sbjct: 307 gcagaacgatagagacttcatttaacttaggttg-----atctaggccagaggcagacct 253 Query: 351 aagtcaaggtaatcct-cctttgaaacactttggtattgctc 391 | |||||| ||| ||| || |||||| ||||||||| ||||| Sbjct: 252 acgtcaagataaccctacccttgaaagactttggtaatgctc 211 Score = 91.7 bits (46), Expect = 2e-15 Identities = 82/95 (86%), Gaps = 1/95 (1%) Strand = Plus / Minus Query: 489 atcagtttatgaaagagcccaatgc-nnnnnnntgcatgttgggtctttgaaacagttca 547 ||||||| ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 108 atcagttaatgaaagagcccaatgcaaaaaaaatgcatgttgggtctttgaaacagttca 49 Query: 548 aatcatttcgataataatccgtttgatctgtttta 582 ||||||| |||||||| | ||||||||||||||| Sbjct: 48 gatcattttgataataaacagtttgatctgtttta 14 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 418 aatcagagcacagggagccatctcattatctt 449 |||||||||||| |||||||||| ||||||| Sbjct: 187 aatcagagcacatggagccatcttcttatctt 156
>emb|AJ240853.1|REX240853 Rhapis excelsa partial rps16 gene Length = 986 Score = 131 bits (66), Expect = 3e-27 Identities = 113/127 (88%), Gaps = 5/127 (3%) Strand = Plus / Plus Query: 368 ctttgaaacactttggtattgctcctagatagatcataatacaaaaaatcaatcagagca 427 |||||||||||||||||||||||||||||| || |||||||| || |||||||||| Sbjct: 235 ctttgaaacactttggtattgctcctagat----cagaatacaaatgatgaatcagagca 290 Query: 428 cagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatcttta 487 || |||||||||||||||| || | ||||||||||| ||||||||||||||||||||||| Sbjct: 291 catggagccatctcattattttcctgtaaagaaaaa-tatggtggactaactgatcttta 349 Query: 488 aatcagt 494 |||||| Sbjct: 350 catcagt 356
>emb|AJ240852.1|GAR240852 Guihaia argyrata partial rps16 gene Length = 988 Score = 131 bits (66), Expect = 3e-27 Identities = 113/127 (88%), Gaps = 5/127 (3%) Strand = Plus / Plus Query: 368 ctttgaaacactttggtattgctcctagatagatcataatacaaaaaatcaatcagagca 427 |||||||||||||||||||||||||||||| || |||||||| || |||||||||| Sbjct: 236 ctttgaaacactttggtattgctcctagat----cagaatacaaatgatgaatcagagca 291 Query: 428 cagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatcttta 487 || |||||||||||||||| || | ||||||||||| ||||||||||||||||||||||| Sbjct: 292 catggagccatctcattattttcctgtaaagaaaaa-tatggtggactaactgatcttta 350 Query: 488 aatcagt 494 |||||| Sbjct: 351 catcagt 357
>emb|AJ240850.1|RHY240850 Rhapidophyllum hystrix partial rps16 gene Length = 987 Score = 131 bits (66), Expect = 3e-27 Identities = 113/127 (88%), Gaps = 5/127 (3%) Strand = Plus / Plus Query: 368 ctttgaaacactttggtattgctcctagatagatcataatacaaaaaatcaatcagagca 427 |||||||||||||||||||||||||||||| || |||||||| || |||||||||| Sbjct: 235 ctttgaaacactttggtattgctcctagat----caaaatacaaatgatgaatcagagca 290 Query: 428 cagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatcttta 487 || |||||||||||||||| || | ||||||||||| ||||||||||||||||||||||| Sbjct: 291 catggagccatctcattattttcctgtaaagaaaaa-tatggtggactaactgatcttta 349 Query: 488 aatcagt 494 |||||| Sbjct: 350 catcagt 356
>emb|AJ429649.1|PPU429649 Polemonium pulcherrimum chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1499 Score = 129 bits (65), Expect = 1e-26 Identities = 177/215 (82%), Gaps = 5/215 (2%) Strand = Plus / Minus Query: 369 tttgaaacactttggtattgctcctagatagatcataatacaaaaaatcaatcagagcac 428 ||||||||||||||||| ||||||| ||| || ||| |||| ||| ||||||||||| Sbjct: 224 tttgaaacactttggtagtgctcctggat----caaaatccaaataatgaatcagagcac 169 Query: 429 agggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatctttaa 488 |||||||||||| |||| |||| || |||||||| | ||| ||||| ||||| ||| Sbjct: 168 ggggagccatctccttatttttctgtcaagaaaaaatctggcggactggctgatatttct 109 Query: 489 atcagtttatgaaagagcccaatg-cnnnnnnntgcatgttgggtctttgaaacagttca 547 ||||||| |||||||||||||||| | |||||||||||||||||||||||||| Sbjct: 108 atcagttaatgaaagagcccaatgccaaaaaagtgcatgttgggtctttgaaacagttcg 49 Query: 548 aatcatttcgataataatccgtttgatctgtttta 582 ||||||| |||| |||| ||||||||||||||| Sbjct: 48 gatcattttgatactaataagtttgatctgtttta 14 Score = 63.9 bits (32), Expect = 5e-07 Identities = 69/80 (86%), Gaps = 1/80 (1%) Strand = Plus / Minus Query: 198 aatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaacttt 257 |||||||||| |||||| ||||| |||| ||||| || |||||||| ||||||||||| Sbjct: 393 aatgctaggcaaaatgagtctaaggacctcaaaaaatct-cttttcgtcctatgaacttt 335 Query: 258 aaggtgtatgaagtctcata 277 ||||||||| |||| ||||| Sbjct: 334 aaggtgtataaagtttcata 315 Score = 50.1 bits (25), Expect = 0.008 Identities = 70/85 (82%) Strand = Plus / Minus Query: 16 atgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcatagattcgagag 75 ||||||| || | ||| |||||||||| |||||| |||||||||| ||| || ||| | Sbjct: 573 atgcaatcaaaagaattgatcttattgaaaaatcgatgtcttactcgataactttgaggg 514 Query: 76 aataggagaacagtagcctgacaaa 100 || | ||||||| |||||||||||| Sbjct: 513 aacaagagaacaatagcctgacaaa 489
>emb|AJ429692.1|PLE429692 Phryma leptostachya chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1501 Score = 127 bits (64), Expect = 4e-26 Identities = 208/254 (81%), Gaps = 12/254 (4%) Strand = Plus / Minus Query: 337 ccagaggcagacctaagtcaaggtaatcct-cctttgaaacactttggtattgctcctag 395 ||||||||||||||| |||||| ||| || ||||||||||||||||||| ||||||| | Sbjct: 263 ccagaggcagacctacgtcaagataaccccacctttgaaacactttggtagtgctcctgg 204 Query: 396 atagatcataatacaaaa-aatcaatcagagcacagggagccatctcattatctt----- 449 || || ||| | ||| ||| |||||||||||| ||||||||||| ||||||| Sbjct: 203 at----cagaatcccaaataatgaatcagagcacatggagccatctccttatcttatttt 148 Query: 450 tccgtaaagaaaaactatggtggactaactgatctttaaatcagtttatgaaagagccca 509 | || |||||||| ||||||||| | ||||| ||| ||||||| ||||||||||||| Sbjct: 147 tatgttaagaaaaaatatggtggattggctgatatttctatcagttaatgaaagagccca 88 Query: 510 atgcnnnnnnn-tgcatgttgggtctttgaaacagttcaaatcatttcgataataatccg 568 |||| ||||||||||||||||||||||||||| ||||||| ||||||||| | Sbjct: 87 atgcaaaaaaaatgcatgttgggtctttgaaacagttcagatcattttgataataataag 28 Query: 569 tttgatctgtttta 582 |||||||||||||| Sbjct: 27 tttgatctgtttta 14 Score = 87.7 bits (44), Expect = 4e-14 Identities = 72/80 (90%), Gaps = 1/80 (1%) Strand = Plus / Minus Query: 198 aatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaacttt 257 |||||||||| ||||||| |||||| |||| |||||| ||||||||| ||||||||||| Sbjct: 400 aatgctaggcataatgagtataaggtcctc-aaaaaatatcttttcgtcctatgaacttt 342 Query: 258 aaggtgtatgaagtctcata 277 |||||||||||||| ||||| Sbjct: 341 aaggtgtatgaagtttcata 322
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 125 bits (63), Expect = 2e-25 Identities = 185/223 (82%), Gaps = 7/223 (3%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| |||| |||| | | | |||||||||| ||||||| |||||| |||| || Sbjct: 53129 ttgataaggtgaatacccagtctattcaatgctaggcataatgagtataaggacctcaaa 53070 Query: 231 aaaacttcttttcgttctatgaactttaaggtgtatgaagtctcatagttaactcttgca 290 |||| ||||||||| |||||||||||||||||||||||| ||||| || | | || | Sbjct: 53069 aaaatctcttttcgtcatatgaactttaaggtgtatgaagtttcatatttga-tttttaa 53011 Query: 291 gtggaacgatagagactccatttcacttaggttgatttaatttagaccagaggcagacct 350 | |||||||||||||| ||||| |||||||||| || ||| |||||| ||||||| Sbjct: 53010 gcagaacgatagagacttcatttaacttaggttg-----atctaggccagagacagacct 52956 Query: 351 aagtcaaggtaat-cctcctttgaaacactttggtattgctcc 392 | |||||| |||| || ||||||||||||||||||| |||||| Sbjct: 52955 acgtcaagataatcccacctttgaaacactttggtaatgctcc 52913 Score = 97.6 bits (49), Expect = 4e-17 Identities = 147/181 (81%), Gaps = 7/181 (3%) Strand = Plus / Minus Query: 409 caaaaaatcaatcagagcacagggagccatctcattatcttt----ccgtaaagaaaaac 464 |||| ||| |||||||||||| |||||||| || |||||||| | || |||||||| Sbjct: 52912 caaataatgaatcagagcacatggagccatttccttatctttttttctgtcaagaaaaaa 52853 Query: 465 tatggtggactaactgatctttaaatcagtttatgaaagagcccaatgcnnnnnnn---t 521 |||| ||||||||||| |||| ||||||| ||||| ||||||||||| | Sbjct: 52852 aatggcagactaactgatatttagatcagttaatgaaggagcccaatgcaaaaaaaaaat 52793 Query: 522 gcatgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgtttt 581 |||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||| Sbjct: 52792 gcatgttgggtctttgaaacagttcagatcattttaataataataagtttgatctgtttt 52733 Query: 582 a 582 | Sbjct: 52732 a 52732
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 125 bits (63), Expect = 2e-25 Identities = 185/223 (82%), Gaps = 7/223 (3%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| |||| |||| | | | |||||||||| ||||||| |||||| |||| || Sbjct: 53215 ttgataaggtgaatacccagtctattcaatgctaggcataatgagtataaggacctcaaa 53156 Query: 231 aaaacttcttttcgttctatgaactttaaggtgtatgaagtctcatagttaactcttgca 290 |||| ||||||||| |||||||||||||||||||||||| ||||| || | | || | Sbjct: 53155 aaaatctcttttcgtcatatgaactttaaggtgtatgaagtttcatatttga-tttttaa 53097 Query: 291 gtggaacgatagagactccatttcacttaggttgatttaatttagaccagaggcagacct 350 | |||||||||||||| ||||| |||||||||| || ||| |||||| ||||||| Sbjct: 53096 gcagaacgatagagacttcatttaacttaggttg-----atctaggccagagacagacct 53042 Query: 351 aagtcaaggtaat-cctcctttgaaacactttggtattgctcc 392 | |||||| |||| || ||||||||||||||||||| |||||| Sbjct: 53041 acgtcaagataatcccacctttgaaacactttggtaatgctcc 52999 Score = 101 bits (51), Expect = 3e-18 Identities = 147/180 (81%), Gaps = 6/180 (3%) Strand = Plus / Minus Query: 409 caaaaaatcaatcagagcacagggagccatctcattatcttt----ccgtaaagaaaaac 464 |||| ||| |||||||||||| |||||||| || |||||||| | || |||||||| Sbjct: 52998 caaataatgaatcagagcacatggagccatttccttatctttttttctgtcaagaaaaaa 52939 Query: 465 tatggtggactaactgatctttaaatcagtttatgaaagagcccaatgcnnnnnnn--tg 522 |||| ||||||||||| |||| ||||||| ||||| ||||||||||| || Sbjct: 52938 aatggcagactaactgatatttagatcagttaatgaaggagcccaatgcaaaaaaaaatg 52879 Query: 523 catgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgtttta 582 ||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||| Sbjct: 52878 catgttgggtctttgaaacagttcagatcattttaataataataagtttgatctgtttta 52819
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 125 bits (63), Expect = 2e-25 Identities = 185/223 (82%), Gaps = 7/223 (3%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| |||| |||| | | | |||||||||| ||||||| |||||| |||| || Sbjct: 53135 ttgataaggtgaatacccagtctattcaatgctaggcataatgagtataaggacctcaaa 53076 Query: 231 aaaacttcttttcgttctatgaactttaaggtgtatgaagtctcatagttaactcttgca 290 |||| ||||||||| |||||||||||||||||||||||| ||||| || | | || | Sbjct: 53075 aaaatctcttttcgtcatatgaactttaaggtgtatgaagtttcatatttga-tttttaa 53017 Query: 291 gtggaacgatagagactccatttcacttaggttgatttaatttagaccagaggcagacct 350 | |||||||||||||| ||||| |||||||||| || ||| |||||| ||||||| Sbjct: 53016 gcagaacgatagagacttcatttaacttaggttg-----atctaggccagagacagacct 52962 Query: 351 aagtcaaggtaat-cctcctttgaaacactttggtattgctcc 392 | |||||| |||| || ||||||||||||||||||| |||||| Sbjct: 52961 acgtcaagataatcccacctttgaaacactttggtaatgctcc 52919 Score = 97.6 bits (49), Expect = 4e-17 Identities = 147/181 (81%), Gaps = 7/181 (3%) Strand = Plus / Minus Query: 409 caaaaaatcaatcagagcacagggagccatctcattatcttt----ccgtaaagaaaaac 464 |||| ||| |||||||||||| |||||||| || |||||||| | || |||||||| Sbjct: 52918 caaataatgaatcagagcacatggagccatttccttatctttttttctgtcaagaaaaaa 52859 Query: 465 tatggtggactaactgatctttaaatcagtttatgaaagagcccaatgcnnnnnnn---t 521 |||| ||||||||||| |||| ||||||| ||||| ||||||||||| | Sbjct: 52858 aatggcagactaactgatatttagatcagttaatgaaggagcccaatgcaaaaaaaaaat 52799 Query: 522 gcatgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgtttt 581 |||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||| Sbjct: 52798 gcatgttgggtctttgaaacagttcagatcattttaataataataagtttgatctgtttt 52739 Query: 582 a 582 | Sbjct: 52738 a 52738
>emb|AJ429652.1|MZA429652 Manilkara zapota chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1472 Score = 125 bits (63), Expect = 2e-25 Identities = 198/244 (81%), Gaps = 6/244 (2%) Strand = Plus / Minus Query: 341 aggcagacctaagtcaaggtaatcctcctttgaaacactttggtattgctcctagataga 400 |||| |||||| |||||| ||| ||| ||||||||||||||||| ||||||| ||| Sbjct: 253 aggccgacctacgtcaagataacccttttttgaaacactttggtagtgctcctggat--- 197 Query: 401 tcataatacaaaaaatcaatcagagcacagggagccatctcattatctttccgtaaagaa 460 || ||| ||| ||| ||||||||||| |||||||||||| |||| |||| || ||||| Sbjct: 196 -caaaatcaaaagaatgaatcagagcacggggagccatctccttatttttctgtcaagaa 138 Query: 461 aaactatggtggactaactgatctttaaatcagtttatgaaagagcccaatgcnnnnnnn 520 ||| ||||| || | ||||| |||| ||||||| || |||||||||||||| Sbjct: 137 aaaatatggcagattggctgatatttatatcagttaataaaagagcccaatgcaaaaaaa 78 Query: 521 --tgcatgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgt 578 |||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| Sbjct: 77 aatgcatgttgggtctttgaaacagttcggatcattttgataataatgagtttgatctgt 18 Query: 579 ttta 582 |||| Sbjct: 17 ttta 14 Score = 77.8 bits (39), Expect = 4e-11 Identities = 90/107 (84%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| |||| |||| | | | || ||||||| |||| || |||||| |||| || Sbjct: 417 ttgataaggtgaatacccagtctattcaaggctaggcataataagtataaggacctcaaa 358 Query: 231 aaaacttcttttcgttctatgaactttaaggtgtatgaagtctcata 277 |||| ||||||||| |||||||||||||||||||| |||| ||||| Sbjct: 357 aaaatatcttttcgtcctatgaactttaaggtgtataaagtttcata 311
>emb|AJ429646.1|MSP429646 Marcgravia sp. Anderberg s.n. chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1505 Score = 125 bits (63), Expect = 2e-25 Identities = 212/261 (81%), Gaps = 9/261 (3%) Strand = Plus / Minus Query: 327 ttaatttagaccagaggcagacctaagtcaaggtaatcctccttt-gaaacactttggta 385 ||||| ||| ||||||||||||||| |||||| ||| || | ||| |||| ||||||||| Sbjct: 270 ttaatctaggccagaggcagacctacgtcaagataaacccctttttgaaatactttggta 211 Query: 386 ttgctcctagatagatcataat-acaaaaaatcaatcagagcacagggagccatctcatt 444 ||||||| ||| || ||| ||||| ||| ||||||||||| ||||||||||| || Sbjct: 210 atgctcctggat----caaaatcacaaataatgaatcagagcacgtggagccatctcctt 155 Query: 445 atctttccgtaaagaaaaactatggtggactaactgatctttaaatcagtttatgaaaga 504 || |||| || |||||||| ||||| ||||| ||||| |||| |||||| |||||||| Sbjct: 154 atttttctgtcaagaaaaaatatggcggactggctgatatttatatcagtcaatgaaaga 95 Query: 505 gcccaatgc---nnnnnnntgcatgttgggtctttgaaacagttcaaatcatttcgataa 561 ||||||||| |||||||||||||||||||||||||| ||||||| ||||| Sbjct: 94 gcccaatgcaaaaaaaaaatgcatgttgggtctttgaaacagttcggatcattttgataa 35 Query: 562 taatccgtttgatctgtttta 582 |||| |||||||||| |||| Sbjct: 34 taataagtttgatctgkttta 14 Score = 58.0 bits (29), Expect = 3e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 33 gatcttattgcaaaatcaatgtcttacttcatagattcgagagaataggagaacagtagc 92 |||||||||| |||||| |||||||||| |||| || ||| ||| | ||||||| |||| Sbjct: 563 gatcttattgaaaaatcgatgtcttactccataactttgagggaacaagagaacaatagc 504 Query: 93 ctgacaaac 101 ||||||||| Sbjct: 503 ctgacaaac 495 Score = 48.1 bits (24), Expect = 0.032 Identities = 85/105 (80%), Gaps = 4/105 (3%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataa----gggcct 226 |||||||||| |||| |||| | | | |||||||||| ||||||| |||| || ||| Sbjct: 427 ttgataaggtgaatacccagtctattcaatgctaggcataatgagtataaataaggacct 368 Query: 227 ccaaaaaacttcttttcgttctatgaactttaaggtgtatgaagt 271 | |||| | |||||||| |||||||||||||||||||| |||| Sbjct: 367 caaaaatatctcttttcgccctatgaactttaaggtgtataaagt 323
>emb|AJ429532.1|SER429532 Stilbe ericoides chloroplast atpE gene (partial), tRNA-Met gene and tRNA-Val gene Length = 1485 Score = 125 bits (63), Expect = 2e-25 Identities = 325/407 (79%), Gaps = 22/407 (5%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| |||| |||| ||| | |||||||||| ||||||| |||||| |||| || Sbjct: 402 ttgataaggtgaata-ccagtccattcaatgctaggcataatgagtataaggtcctcaaa 344 Query: 231 aaaact----tcttttcgttctatgaactttaaggtgtatgaagtctcatagttaactct 286 |||| ||||||||| ||||||||||||||||||||||||| ||||| || | | | Sbjct: 343 aaaaaaaatctcttttcgtcctatgaactttaaggtgtatgaagtttcatatttgatttt 284 Query: 287 tgcagtggaacgatagagactccatttcacttaggttgatttaatttagaccagaggcag 346 | || |||||||||||||| | ||| ||||| |||| || | |||||||||| Sbjct: 283 ttaagccgaacgatagagacttcgtttaacttaaaatgatcta-----ggccagaggcag 229 Query: 347 acctaagtcaaggtaatcct-cctttgaaacactttggtattgctcctagatagatcata 405 ||||| |||||| ||| || |||||||||||||||||| ||||||| || |||| | Sbjct: 228 acctacgtcaagataaccccacctttgaaacactttggtggtgctcct-ga---atcaga 173 Query: 406 atacaaaa-aatcaatcagagcacagggagccatctcattatctt-----tccgtaaaga 459 || | ||| ||| |||||||||||| |||||||| || ||||||| || || |||| Sbjct: 172 atcccaaataatgaatcagagcacatggagccatttccttatcttatttttctgtcaaga 113 Query: 460 aaaactatggtggactaactgatctttaaatcagtttatgaaagagcccaatgcnnnnnn 519 |||| ||||||||| | ||||| ||| ||||||| ||||||||||||||||| Sbjct: 112 aaaaatatggtggattggctgatatttctatcagttaatgaaagagcccaatgcaaaaaa 53 Query: 520 n-tgcatgttgggtctttgaaacagttcaaatcatttcgataataat 565 ||||||||||||||||||||||||||| ||||||| ||||||||| Sbjct: 52 aatgcatgttgggtctttgaaacagttcagatcattttgataataat 6
>emb|AJ429529.1|GEL429529 Garrya elliptica chloroplast atpE gene (partial), tRNA-Met gene and tRNA-Val gene Length = 1488 Score = 125 bits (63), Expect = 2e-25 Identities = 221/270 (81%), Gaps = 12/270 (4%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| |||| |||| | | | |||||||||| ||||||| |||||| |||| || Sbjct: 405 ttgataaggtgaatacccagtctatttaatgctaggcataatgagtataaggacctc-aa 347 Query: 231 aaaacttcttttcgttctatgaactttaaggtgtatgaagtctcatagttaactcttgca 290 |||| ||||||||| ||||||||||||||||||||||||| ||||| || | | || | Sbjct: 346 aaaatatcttttcgtcctatgaactttaaggtgtatgaagtttcatatttga-tttttaa 288 Query: 291 gtggaacgatagagactccatttcacttaggttgatttaatttagaccagaggcagacct 350 | || ||||||||||| ||||| |||||||||| || ||| ||| ||||| |||| Sbjct: 287 gcagagcgatagagacttcatttaacttaggttg-----atytaggccaaaggcaaacct 233 Query: 351 aagtcaaggtaatcctcctttgaaacactttggtattgctcctagatagatcataataca 410 | |||||| ||| || ||||||||||||||||||| |||||| | ||||| ||| || Sbjct: 232 acgtcaagataa-ccccctttgaaacactttggtagtgctcc----tggatcagaatcca 178 Query: 411 aaaaatcaatcagagcacagggagccatct 440 || ||| |||||||||||| |||||||||| Sbjct: 177 aataatgaatcagagcacatggagccatct 148 Score = 85.7 bits (43), Expect = 1e-13 Identities = 101/122 (82%), Gaps = 3/122 (2%) Strand = Plus / Minus Query: 456 aagaaaaactatggtggactaactgatctttaaatcagtttatgaaagagcccaatgcnn 515 |||||||| ||||| ||||| ||||| |||| ||||||| ||||||||||||||||| Sbjct: 122 aagaaaaaatatggcggactgtctgatatttatatcagttaatgaaagagcccaatgcaa 63 Query: 516 nnnnn---tgcatgttgggtctttgaaacagttcaaatcatttcgataataatccgtttg 572 ||||||||||||||||||||||||||| ||||||| ||||||||| ||||| Sbjct: 62 aaaaaaaatgcatgttgggtctttgaaacagttcagatcattttgataataataagtttg 3 Query: 573 at 574 || Sbjct: 2 at 1
>gb|AY091652.1| Quercus glauca isolate 3C chloroplast tRNA-Val (trnV) gene and trnV-trnM intergenic spacer, partial sequence Length = 849 Score = 125 bits (63), Expect = 2e-25 Identities = 140/167 (83%), Gaps = 2/167 (1%) Strand = Plus / Minus Query: 418 aatcagagcacagggagccatctcattatctttccgtaaagaaaaactatggtggactaa 477 |||| ||||||| ||||||||||| |||||||| || |||||||| |||||| ||||| Sbjct: 168 aatccgagcacacggagccatctctttatctttatgtcaagaaaaaatatggtagactag 109 Query: 478 ctgatctttaaatcagtttatgaaagagcccaatgcnnnnnnn--tgcatgttgggtctt 535 | ||| ||| |||||||||||||||||||||||| ||||||||||||||| Sbjct: 108 ccgatatttctttcagtttatgaaagagcccaatgcacaaaaaaatgcatgttgggtctt 49 Query: 536 tgaaacagttcaaatcatttcgataataatccgtttgatctgtttta 582 |||||| ||||||||||||| ||||||||| ||||||||||||||| Sbjct: 48 tgaaacggttcaaatcattttgataataattagtttgatctgtttta 2 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 343 gcagacctaagtcaaggtaatcctcctttgaaacactttggtattgctcct 393 ||||||||| |||| | ||||||| |||||||||||||||| | ||||||| Sbjct: 241 gcagacctacgtcaggataatccttctttgaaacactttggcagtgctcct 191 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 248 tatgaactttaaggtgtatgaagtctcata 277 ||||| |||||||||||||||||| ||||| Sbjct: 346 tatgagctttaaggtgtatgaagtttcata 317
>gb|AY091651.1| Quercus glauca isolate 2B chloroplast tRNA-Val (trnV) gene and trnV-trnM intergenic spacer, partial sequence Length = 849 Score = 125 bits (63), Expect = 2e-25 Identities = 140/167 (83%), Gaps = 2/167 (1%) Strand = Plus / Minus Query: 418 aatcagagcacagggagccatctcattatctttccgtaaagaaaaactatggtggactaa 477 |||| ||||||| ||||||||||| |||||||| || |||||||| |||||| ||||| Sbjct: 168 aatccgagcacacggagccatctctttatctttatgtcaagaaaaaatatggtagactag 109 Query: 478 ctgatctttaaatcagtttatgaaagagcccaatgcnnnnnnn--tgcatgttgggtctt 535 | ||| ||| |||||||||||||||||||||||| ||||||||||||||| Sbjct: 108 ccgatatttctttcagtttatgaaagagcccaatgcacaaaaaaatgcatgttgggtctt 49 Query: 536 tgaaacagttcaaatcatttcgataataatccgtttgatctgtttta 582 |||||| ||||||||||||| ||||||||| ||||||||||||||| Sbjct: 48 tgaaacggttcaaatcattttgataataattagtttgatctgtttta 2 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 343 gcagacctaagtcaaggtaatcctcctttgaaacactttggtattgctcct 393 ||||||||| |||| | ||||||| |||||||||||||||| | ||||||| Sbjct: 241 gcagacctacgtcaggataatccttctttgaaacactttggcagtgctcct 191 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 248 tatgaactttaaggtgtatgaagtctcata 277 ||||| |||||||||||||||||| ||||| Sbjct: 346 tatgagctttaaggtgtatgaagtttcata 317
>gb|AY091650.1| Quercus glauca isolate 1A chloroplast tRNA-Val (trnV) gene and trnV-trnM intergenic spacer, partial sequence Length = 849 Score = 125 bits (63), Expect = 2e-25 Identities = 140/167 (83%), Gaps = 2/167 (1%) Strand = Plus / Minus Query: 418 aatcagagcacagggagccatctcattatctttccgtaaagaaaaactatggtggactaa 477 |||| ||||||| ||||||||||| |||||||| || |||||||| |||||| ||||| Sbjct: 168 aatccgagcacacggagccatctctttatctttatgtcaagaaaaaatatggtagactag 109 Query: 478 ctgatctttaaatcagtttatgaaagagcccaatgcnnnnnnn--tgcatgttgggtctt 535 | ||| ||| |||||||||||||||||||||||| ||||||||||||||| Sbjct: 108 ccgatatttctttcagtttatgaaagagcccaatgcacaaaaaaatgcatgttgggtctt 49 Query: 536 tgaaacagttcaaatcatttcgataataatccgtttgatctgtttta 582 |||||| ||||||||||||| ||||||||| ||||||||||||||| Sbjct: 48 tgaaacggttcaaatcattttgataataattagtttgatctgtttta 2 Score = 54.0 bits (27), Expect = 5e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 343 gcagacctaagtcaaggtaatcctcctttgaaacactttggtattgctcct 393 ||||||||| |||| | ||||||| |||||||||||||||| | ||||||| Sbjct: 241 gcagacctacgtcaggataatccttctttgaaacactttggcagtgctcct 191 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 248 tatgaactttaaggtgtatgaagtctcata 277 ||||| |||||||||||||||||| ||||| Sbjct: 346 tatgagctttaaggtgtatgaagtttcata 317
>emb|AJ240849.1|TNA240849 Trachycarpus nanus partial rps16 gene Length = 986 Score = 123 bits (62), Expect = 7e-25 Identities = 112/127 (88%), Gaps = 5/127 (3%) Strand = Plus / Plus Query: 368 ctttgaaacactttggtattgctcctagatagatcataatacaaaaaatcaatcagagca 427 ||||||||||||||||||| |||||||||| || |||||||| || |||||||||| Sbjct: 235 ctttgaaacactttggtatggctcctagat----cagaatacaaatgatgaatcagagca 290 Query: 428 cagggagccatctcattatctttccgtaaagaaaaactatggtggactaactgatcttta 487 || |||||||||||||||| || | ||||||||||| ||||||||||||||||||||||| Sbjct: 291 catggagccatctcattattttcctgtaaagaaaaa-tatggtggactaactgatcttta 349 Query: 488 aatcagt 494 |||||| Sbjct: 350 catcagt 356
>emb|AJ429660.1|PRH429660 Pelliciera rhizophorae chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1496 Score = 121 bits (61), Expect = 3e-24 Identities = 211/259 (81%), Gaps = 7/259 (2%) Strand = Plus / Minus Query: 327 ttaatttagaccagaggcagacctaagtcaaggtaatcctccttt-gaaacactttggta 385 ||||| ||| ||||||||||||||| |||||| ||| | ||||| |||| ||||||||| Sbjct: 263 ttaatctaggccagaggcagacctacgtcaagataaaaccccttttgaaatactttggta 204 Query: 386 ttgctcctagatagatcataatacaaaa-aatcaatcagagcacagggagccatctcatt 444 ||||||| ||| || ||| ||||| ||| |||| |||||| ||||||||||| || Sbjct: 203 gtgctcctggat----caaaatccaaaataatgaatccgagcacgtggagccatctcctt 148 Query: 445 atctttccgtaaagaaaaactatggtggactaactgatctttaaatcagtttatgaaaga 504 || |||| || |||||||| ||||| |||||||||||| ||| ||||||| |||||||| Sbjct: 147 atttttctgtcaagaaaaaatatggcggactaactgatatttctatcagttaatgaaaga 88 Query: 505 gcccaatgc-nnnnnnntgcatgttgggtctttgaaacagttcaaatcatttcgataata 563 ||||||||| || |||||||||||||||||||||| ||||||| ||||||| Sbjct: 87 gcccaatgcaaaaaaaaagcctgttgggtctttgaaacagttcggatcattttgataata 28 Query: 564 atccgtttgatctgtttta 582 | ||||||||||||||| Sbjct: 27 agaagtttgatctgtttta 9 Score = 48.1 bits (24), Expect = 0.032 Identities = 57/68 (83%) Strand = Plus / Minus Query: 33 gatcttattgcaaaatcaatgtcttacttcatagattcgagagaataggagaacagtagc 92 |||||||||| |||||| |||||||||| ||| || ||| ||| | ||||||| |||| Sbjct: 556 gatcttattgaaaaatcgatgtcttactctataactttgagggaacaagagaacaatagc 497 Query: 93 ctgacaaa 100 |||||||| Sbjct: 496 ctgacaaa 489
>emb|AJ429641.1|ICA429641 Impatiens capensis chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1506 Score = 121 bits (61), Expect = 3e-24 Identities = 202/247 (81%), Gaps = 7/247 (2%) Strand = Plus / Minus Query: 339 agaggcagacctaagtcaaggtaatcctc-ctttgaaacactttggtattgctcctagat 397 ||||||||||||| |||||| ||| || | ||||||| ||||||||| |||||| | Sbjct: 256 agaggcagacctacgtcaagataaacccctttttgaaatactttggtagtgctcc----t 201 Query: 398 agatcataat-acaaaaaatcaatcagagcacagggagccatctcattatctttccgtaa 456 ||||| ||| ||||| ||| | | ||||||| ||||||||||| ||||||||| || | Sbjct: 200 ggatcaaaataacaaagaattactgagagcacgtggagccatctccttatctttctgtca 141 Query: 457 agaaaaactatggtggactaactgatctttaaatcagtttatgaaagagcccaatgc-nn 515 ||||||| ||||| |||||||||||| ||| |||||| ||||||||||||||||| Sbjct: 140 agaaaaaatatggcggactaactgatatttctttcagttaatgaaagagcccaatgcaaa 81 Query: 516 nnnnntgcatgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatc 575 |||||||||||||||||||||||||| ||||||| |||||||| |||||||| Sbjct: 80 aaaaatgcatgttgggtctttgaaacagttcggatcattttgataataaaaagtttgatc 21 Query: 576 tgtttta 582 ||||||| Sbjct: 20 tgtttta 14 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 33 gatcttattgcaaaatcaatgtcttacttcatagattcgagagaataggagaacagtagc 92 |||||||||| |||||| |||||||||| |||| || ||| ||| | ||||||| |||| Sbjct: 561 gatcttattgaaaaatcgatgtcttactccataactttgagggaacaagagaacaatagc 502 Query: 93 ctgacaaa 100 |||||||| Sbjct: 501 ctgacaaa 494
>emb|AJ400848.1|SOL400848 Spinacia oleracea complete chloroplast genome Length = 150725 Score = 117 bits (59), Expect = 4e-23 Identities = 181/220 (82%), Gaps = 5/220 (2%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||| ||| |||| |||||| | | |||||||||| ||||||| ||||||||||| | Sbjct: 50456 ttgatagggtgaatacccagcctattcaatgctaggcataatgagtataagggcctc--a 50399 Query: 231 aaaacttcttttcgttctatgaactttaaggtgtatgaagtctcatagttaactcttgca 290 |||| ||||||||| ||||||||||||||||||||||||| ||||| | | |||| | Sbjct: 50398 aaaatctcttttcgtcctatgaactttaaggtgtatgaagtttcatattggattctttaa 50339 Query: 291 gtggaacgatagagactccatttcacttaggttgatttaatttagaccagaggcagacct 350 | |||||||||||||||||||| | || | ||| ||||||| ||| | |||||||| Sbjct: 50338 gcagaacgatagagactccatttaattt---taaattgaatttaggccaaaagcagacct 50282 Query: 351 aagtcaaggtaatcctcctttgaaacactttggtattgct 390 | |||||| ||| || |||||||||||||||||| |||| Sbjct: 50281 acgtcaagataactcttctttgaaacactttggtagtgct 50242 Score = 105 bits (53), Expect = 2e-19 Identities = 109/129 (84%), Gaps = 2/129 (1%) Strand = Plus / Minus Query: 456 aagaaaaactatggtggactaactgatctttaaatcagtttatgaaagagcccaatgcnn 515 |||||||| |||||||||||| ||||| |||| |||| || ||||||||||||||||| Sbjct: 50175 aagaaaaaatatggtggactagctgatatttatatcaattaatgaaagagcccaatgcaa 50116 Query: 516 nnnnn--tgcatgttgggtctttgaaacagttcaaatcatttcgataataatccgtttga 573 ||||||||||||||||||||||||||||||||||| || ||||| |||||| Sbjct: 50115 aaaaaaatgcatgttgggtctttgaaacagttcaaatcattttgagaataaaaagtttga 50056 Query: 574 tctgtttta 582 ||||||||| Sbjct: 50055 tctgtttta 50047
>emb|AJ429726.1|ASP429726 Argophyllum sp. Telford 5462 chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1493 Score = 117 bits (59), Expect = 4e-23 Identities = 137/164 (83%), Gaps = 1/164 (0%) Strand = Plus / Minus Query: 420 tcagagcacagggagccatctcattatctttccgtaaagaaaaactatggtggactaact 479 |||||||||| |||||||||| |||| |||| || || ||||| ||||| ||||| || Sbjct: 177 tcagagcacatggagccatcttcttatttttctgtcaaaaaaaaatatggcggactggct 118 Query: 480 gatctttaaatcagtttatgaaagagcccaatgcnnnnnnn-tgcatgttgggtctttga 538 ||| |||| ||||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 117 gatatttatatcagttaatgaaagagcccaatgcaaaaaaaatgcatgttgggtctttga 58 Query: 539 aacagttcaaatcatttcgataataatccgtttgatctgtttta 582 ||||||||| ||||||| ||||||||| ||||| ||||||||| Sbjct: 57 aacagttcagatcattttgataataataagtttggtctgtttta 14 Score = 71.9 bits (36), Expect = 2e-09 Identities = 128/158 (81%), Gaps = 8/158 (5%) Strand = Plus / Minus Query: 228 caaaaaacttcttttcgttctatgaactttaaggtgtatgaagtctcatagttaactctt 287 ||||||| ||||||||| |||||||||||| |||||||||||| ||||| || | || Sbjct: 351 caaaaaatctcttttcgtcctatgaactttagggtgtatgaagtttcatattt---tttt 295 Query: 288 gcagtggaacgatagagactccatttcacttaggttgatttaatttagaccagaggcaga 347 || || ||||||||||| ||||| ||||||| ||||| ||| ||||||||||| Sbjct: 294 ttagcagagcgatagagacttcatttaacttagg-----ttaatctaggccagaggcaga 240 Query: 348 cctaagtcaaggtaatcctcctttgaaacactttggta 385 |||| |||||| ||| || || |||||| ||||||||| Sbjct: 239 cctacgtcaagataacccccccttgaaaaactttggta 202 Score = 40.1 bits (20), Expect = 7.9 Identities = 44/52 (84%) Strand = Plus / Minus Query: 16 atgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcataga 67 ||||||| || | ||| |||||||||| ||||| ||||||||||| ||||| Sbjct: 551 atgcaatcaaaaaaattgatcttattgagaaatcgatgtcttactttataga 500
>emb|AJ429723.1|HJA429723 Helwingia japonica chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1493 Score = 117 bits (59), Expect = 4e-23 Identities = 183/223 (82%), Gaps = 6/223 (2%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| |||| |||| | | | |||||||||| ||||||| |||||| ||| || Sbjct: 416 ttgataaggtgaatacccagtctattcaatgctaggcataatgagtataaggaactcaaa 357 Query: 231 aaaacttcttttcgttctatgaactttaaggtgtatgaagtctcatagttaactcttgca 290 |||| ||||||||| ||||||||||||||||||||||||| ||||| || | | || | Sbjct: 356 aaaatctcttttcgtcctatgaactttaaggtgtatgaagtttcatatttga-tttttaa 298 Query: 291 gtggaacgatagagactccatttcacttaggttgatttaatttagaccagaggcagacct 350 | |||||||||||||| ||||| ||||||| ||||| || |||||||||||||| Sbjct: 297 gcagaacgatagagacttcatttaacttagg-----ttaatctatgccagaggcagacct 243 Query: 351 aagtcaaggtaatcctcctttgaaacactttggtattgctcct 393 | |||||| ||| | | ||||||||||||||||| ||||||| Sbjct: 242 acgtcaagataaatcccttttgaaacactttggtagtgctcct 200 Score = 67.9 bits (34), Expect = 3e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 521 tgcatgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgttt 580 ||||||||| ||||||||||||||||| || |||| |||||||| ||||||||||||| Sbjct: 75 tgcatgttgagtctttgaaacagttcagattatttttataataataagtttgatctgttt 16 Query: 581 ta 582 || Sbjct: 15 ta 14
>emb|AJ429535.1|CSE429535 Carpodetus serratus chloroplast atpE gene (partial), tRNA-Met gene and tRNA-Val gene Length = 1458 Score = 117 bits (59), Expect = 4e-23 Identities = 177/215 (82%), Gaps = 6/215 (2%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| |||| |||| | | | |||||||||| ||||||| |||||| |||| || Sbjct: 346 ttgataaggtgaatacccagtctattcaatgctaggcataatgagtataaggacctcaaa 287 Query: 231 aaaacttcttttcgttctatgaactttaaggtgtatgaagtctcatagttaactcttgca 290 |||| ||||||||| ||||||||||||||||||||||||| ||||| || | | || | Sbjct: 286 aaaatctcttttcgtcctatgaactttaaggtgtatgaagtttcatatttga-tttttaa 228 Query: 291 gtggaacgatagagactccatttcacttaggttgatttaatttagaccagaggcagacct 350 | || |||||||||| ||||| ||||||| ||||| ||| |||||||||||||| Sbjct: 227 gcagagtgatagagacttcatttaacttagg-----ttaatctaggccagaggcagacct 173 Query: 351 aagtcaaggtaatcctcctttgaaacactttggta 385 | |||||| ||| || || |||||||||||||||| Sbjct: 172 acgtcaagataacccccccttgaaacactttggta 138 Score = 54.0 bits (27), Expect = 5e-04 Identities = 91/112 (81%), Gaps = 4/112 (3%) Strand = Plus / Minus Query: 16 atgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcatagattcgagag 75 ||||||| || | ||| |||||||||| ||||| |||||||||| |||| || ||| | Sbjct: 500 atgcaatcaaaagaattgatcttattgagaaatcgatgtcttactccataactttgaggg 441 Query: 76 aataggagaacagtagcctgacaaacagtcggttcagtccgattcaggtgcc 127 || | ||||||| |||||||||||| ||||| |||||||||||||||| Sbjct: 440 aacaagagaacaatagcctgacaaa----aggttcggtccgattcaggtgcc 393 Score = 44.1 bits (22), Expect = 0.51 Identities = 32/36 (88%) Strand = Plus / Minus Query: 478 ctgatctttaaatcagtttatgaaagagcccaatgc 513 ||||| |||| ||||||| ||||||||||||| ||| Sbjct: 42 ctgatatttatatcagttaatgaaagagcccawtgc 7
>emb|AJ429527.1|CRA429527 Cyrilla racemiflora chloroplast atpE gene (partial), tRNA-Met gene and tRNA-Val gene Length = 1477 Score = 115 bits (58), Expect = 2e-22 Identities = 191/236 (80%), Gaps = 5/236 (2%) Strand = Plus / Minus Query: 337 ccagaggcagacctaagtcaaggtaatcctcctttgaaacactttggtattgctcctaga 396 ||||| ||||||||| |||||| ||| ||| ||||||||||||||||| |||| || || Sbjct: 232 ccagaagcagacctacgtcaagataacccttttttgaaacactttggtagtgcttctgga 173 Query: 397 tagatcataatacaaaaaatcaatcagagcacagggagccatctcattatctttccgtaa 456 | || ||| |||||| ||||||||||| ||||||||||| |||| ||| | | Sbjct: 172 t----caaaattttaaaaatgaatcagagcacgtggagccatctccttatttttttggca 117 Query: 457 agaaaaactatggtggactaactgatctttaaatcagtttatgaaagagcccaatgc-nn 515 ||||||| ||||| ||||| ||||| |||| ||||||| ||||||||||||||||| Sbjct: 116 agaaaaaatatggcggactcgctgatatttatatcagttaatgaaagagcccaatgcaaa 57 Query: 516 nnnnntgcatgttgggtctttgaaacagttcaaatcatttcgataataatccgttt 571 |||||||||||||||||||||||||| ||||||| |||||||||| |||| Sbjct: 56 aaaaatgcatgttgggtctttgaaacagttcggatcattttgataataatcagttt 1 Score = 69.9 bits (35), Expect = 9e-09 Identities = 90/107 (84%), Gaps = 1/107 (0%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| |||| |||| | | | ||||||| || ||||||| |||||| |||| || Sbjct: 391 ttgataaggtgaatacccagtctattcaatgctaagcataatgagtataaggacctc-aa 333 Query: 231 aaaacttcttttcgttctatgaactttaaggtgtatgaagtctcata 277 |||| ||||||||| |||||| ||||||||||||| |||| ||||| Sbjct: 332 aaaatatcttttcgtcctatgagctttaaggtgtataaagtttcata 286 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 33 gatcttattgcaaaatcaatgtcttacttcatagattcgagagaataggagaacagtagc 92 |||||||||| |||||| |||||||||| |||| || ||| ||| | ||||||| |||| Sbjct: 527 gatcttattgaaaaatcgatgtcttactccataactttgagggaacaagagaacaatagc 468 Query: 93 ctgacaaa 100 |||||||| Sbjct: 467 ctgacaaa 460
>emb|AJ429694.1|GCO429694 Globularia cordifolia chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1477 Score = 113 bits (57), Expect = 7e-22 Identities = 204/249 (81%), Gaps = 11/249 (4%) Strand = Plus / Minus Query: 337 ccagaggcagacctaagtcaaggtaatcct-cctttgaaacactttggtattgctcctag 395 ||||||||||||||| |||||| ||| || ||||||||||||||||||| ||||||| | Sbjct: 254 ccagaggcagacctacgtcaagataaccccacctttgaaacactttggtagtgctcctgg 195 Query: 396 atagatcataatacaaaa-aatcaatcagagcacagggagccatctcattatctttccgt 454 || || ||| ||||| ||| |||||||||||| |||||||||| |||||||| || Sbjct: 194 at----cagaatccaaaataatgaatcagagcacatggagccatcttcttatctttt-gt 140 Query: 455 aaagaaaaactatggtggactaactgatctttaaatcagtttatgaaagagcccaatgcn 514 || ||||| ||| ||| | ||||| ||| ||||||| ||||||||||||||||| Sbjct: 139 caaaaaaaa---tggcggattggctgatatttctatcagttaatgaaagagcccaatgca 83 Query: 515 nnnnnn-tgcatgttgggtctttgaaacagttcaaatcatttcgataataatccgtttga 573 ||||||||||||||||||||||||||| ||||||| ||||||||| |||||| Sbjct: 82 aaaaaaatgcatgttgggtctttgaaacagttcagatcattttgataataataagtttga 23 Query: 574 tctgtttta 582 ||||||||| Sbjct: 22 tctgtttta 14 Score = 83.8 bits (42), Expect = 6e-13 Identities = 67/74 (90%), Gaps = 1/74 (1%) Strand = Plus / Minus Query: 198 aatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaacttt 257 |||||||||| ||||||| | |||| |||| ||||||| ||||||||| ||||||||||| Sbjct: 387 aatgctaggcataatgagtaaaaggccctc-aaaaaacctcttttcgtcctatgaacttt 329 Query: 258 aaggtgtatgaagt 271 |||||||||||||| Sbjct: 328 aaggtgtatgaagt 315
>emb|AJ429664.1|BOF429664 Borago officinalis chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1536 Score = 113 bits (57), Expect = 7e-22 Identities = 83/94 (88%) Strand = Plus / Minus Query: 489 atcagtttatgaaagagcccaatgcnnnnnnntgcatgttgggtctttgaaacagttcaa 548 ||||||| ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 107 atcagttaatgaaagagcccaatgcaaaaaagtgcatgttgggtctttgaaacagttcag 48 Query: 549 atcatttcgataataatccgtttgatctgtttta 582 ||||| | |||||||||||||||||||||||||| Sbjct: 47 atcatattgataataatccgtttgatctgtttta 14 Score = 95.6 bits (48), Expect = 2e-16 Identities = 72/80 (90%) Strand = Plus / Minus Query: 198 aatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaacttt 257 |||||||||| ||||||| |||||| |||| |||||| ||||||||| ||||||||||| Sbjct: 402 aatgctaggcttaatgagtataaggacctcaaaaaaatctcttttcgtcctatgaacttt 343 Query: 258 aaggtgtatgaagtctcata 277 |||||||||||||| ||||| Sbjct: 342 aaggtgtatgaagtttcata 323 Score = 48.1 bits (24), Expect = 0.032 Identities = 30/32 (93%) Strand = Plus / Minus Query: 295 aacgatagagactccatttcacttaggttgat 326 ||||||||||||| ||||| |||||||||||| Sbjct: 299 aacgatagagacttcatttaacttaggttgat 268
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 111 bits (56), Expect = 3e-21 Identities = 200/246 (81%), Gaps = 7/246 (2%) Strand = Plus / Minus Query: 338 cagaggcagacctaagtcaaggtaatcctcctttgaaacactttggtattgctcctagat 397 |||| ||| ||||| |||| | ||| ||| |||||||||||||||||| |||||| |||| Sbjct: 54137 cagaagcatacctacgtcaggataacccttctttgaaacactttggtagtgctccgagat 54078 Query: 398 agatcataatacaaaaaatcaatcagagcacagggagccatctcattat-ctttccgtaa 456 || ||| ||| ||| |||||||||||| ||| ||||||| | | ||||| | | Sbjct: 54077 ---tcg-aatcaaaataatgaatcagagcacatggaaccatctccctttactttctgcca 54022 Query: 457 agaaaaactatggtggactaactgatctttaaatcagtttatgaaagagcccaatgcnnn 516 ||||||| |||||| |||||||| || | ||| ||||| ||||||||||||||||| Sbjct: 54021 agaaaaaatatggtagactaacttatttataa--cagttaatgaaagagcccaatgcaaa 53964 Query: 517 nnnntgcatgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatct 576 |||||||||||||||||||||||||||||| |||| ||||||||| ||||||||| Sbjct: 53963 aaaatgcatgttgggtctttgaaacagttcaaattattttgataataataagtttgatct 53904 Query: 577 gtttta 582 |||||| Sbjct: 53903 gtttta 53898 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 252 aactttaaggtgtatgaagtctcata 277 |||||||||||||||||||| ||||| Sbjct: 54224 aactttaaggtgtatgaagtttcata 54199 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 gagaacagtagcctgacaaa 100 |||||||||||||||||||| Sbjct: 54400 gagaacagtagcctgacaaa 54381
>emb|AJ429693.1|AMA429693 Antirrhinum majus chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1487 Score = 111 bits (56), Expect = 3e-21 Identities = 206/254 (81%), Gaps = 12/254 (4%) Strand = Plus / Minus Query: 337 ccagaggcagacctaagtcaaggtaatcct-cctttgaaacactttggtattgctcctag 395 ||||||||| ||||| |||||| ||| || || |||||||||||||||| ||||||| | Sbjct: 263 ccagaggcaaacctacgtcaagataaccccacccttgaaacactttggtagtgctcctgg 204 Query: 396 atagatcataatacaaaa-aatcaatcagagcacagggagccatctcattatctt----- 449 || || ||| |||| ||| |||||||||||| |||||||||| ||||||| Sbjct: 203 at----cagaatcaaaaataatgaatcagagcacatggagccatcttcttatcttatttt 148 Query: 450 tccgtaaagaaaaactatggtggactaactgatctttaaatcagtttatgaaagagccca 509 || || |||||||| ||||| ||| |||||||| ||| |||||| ||||||||||||| Sbjct: 147 tctgtcaagaaaaaatatggcggattaactgatatttctttcagttaatgaaagagccca 88 Query: 510 atgcnnnnnnn-tgcatgttgggtctttgaaacagttcaaatcatttcgataataatccg 568 |||| ||||||||||||||||||||||||||| ||||||| ||||||||| | Sbjct: 87 atgcaaaaaaaatgcatgttgggtctttgaaacagttcagatcattttgataataataag 28 Query: 569 tttgatctgtttta 582 |||||||||||||| Sbjct: 27 tttgatctgtttta 14 Score = 87.7 bits (44), Expect = 4e-14 Identities = 72/80 (90%), Gaps = 1/80 (1%) Strand = Plus / Minus Query: 198 aatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaacttt 257 |||||||||| ||| ||| |||||| |||| |||||||| |||||||| ||||||||||| Sbjct: 399 aatgctaggcataaggagtataaggtcctcaaaaaaact-cttttcgtcctatgaacttt 341 Query: 258 aaggtgtatgaagtctcata 277 |||||||||||||| ||||| Sbjct: 340 aaggtgtatgaagtttcata 321
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 111 bits (56), Expect = 3e-21 Identities = 223/277 (80%), Gaps = 5/277 (1%) Strand = Plus / Plus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgt-aatgaggataagggcctcca 229 |||||||||| |||| |||||| | | |||||||||| | |||||| |||||| |||| | Sbjct: 12052 ttgataaggtgaatacccagcctattcaatgctaggccttaatgagtataaggacctcaa 12111 Query: 230 aaaaacttcttttcgttctatgaactttaaggtgtatgaagtctcatagttaactcttgc 289 |||| |||||||| |||||||||| |||||||| ||||| ||||| || | || Sbjct: 12112 aaaatgctcttttcgccctatgaacttgaaggtgtaggaagtttcatatttggtttttta 12171 Query: 290 agtggaacgatagagactccatttcacttaggttgatttaatttagaccagaggcagacc 349 || | |||||| | |||||||| |||||||||||| | |||| | | ||| ||||||| Sbjct: 12172 agcaggtcgatagggcctccatttaacttaggttgatctgatttcggcaagaagcagacc 12231 Query: 350 taagtcaaggtaatcctcctttgaaacactttggtattgctcctagatagatcataatac 409 || |||||| ||||||| |||||||||||||||||| ||||||| | || ||| | Sbjct: 12232 tacgtcaagataatccttctttgaaacactttggtaatgctcctgagtcga----aatcc 12287 Query: 410 aaaaaatcaatcagagcacagggagccatctcattat 446 ||| ||| |||||||||||||||||||||||| |||| Sbjct: 12288 aaataatgaatcagagcacagggagccatctccttat 12324 Score = 83.8 bits (42), Expect = 6e-13 Identities = 51/54 (94%) Strand = Plus / Plus Query: 529 gggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgtttta 582 |||||||||||||||||| |||||||| |||||||||| ||||||||||||||| Sbjct: 12410 gggtctttgaaacagttcgaatcattttgataataatcagtttgatctgtttta 12463 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 472 gactaactgatctttaaatcagtttatgaaagagcccaatgc 513 ||||||| ||| |||| ||||||| ||||||||||||||||| Sbjct: 12344 gactaaccgatatttatatcagttaatgaaagagcccaatgc 12385
>gb|AY865324.1| Schlechtendalia luzulifolia isolate 15SchP5P6 tRNA-Glu (trnE) gene, partial sequence; tRNA-Tyr (trnY) gene, complete sequence; and trnY-trnT intergenic spacer, partial sequence; chloroplast Length = 916 Score = 111 bits (56), Expect = 3e-21 Identities = 137/164 (83%), Gaps = 3/164 (1%) Strand = Plus / Minus Query: 420 tcagagcacagggagccatctcattatctttccgtaaagaaaaactatggtggactaact 479 |||||||||| ||||||||||| |||| |||| || || ||||| |||| |||| || Sbjct: 280 tcagagcacatggagccatctccttatttttctgtcaaaaaaaa--atggcagactggct 223 Query: 480 gatctttaaatcagtttatgaaagagcccaatgcnnnnnnn-tgcatgttgggtctttga 538 ||| |||| ||||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 222 gatatttatatcagttaatgaaagagcccaatgcacaaaaaatgcatgttgggtctttga 163 Query: 539 aacagttcaaatcatttcgataataatccgtttgatctgtttta 582 ||||||||| ||||||| ||||||||| ||||||||||||||| Sbjct: 162 aacagttcagatcattttgataataataagtttgatctgtttta 119 Score = 97.6 bits (49), Expect = 4e-17 Identities = 154/188 (81%), Gaps = 7/188 (3%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| |||| |||| | | | |||||||||| ||||| |||||| |||| || Sbjct: 510 ttgataaggtgaatacccagtctatttaatgctaggct--atgagtataaggacctcaaa 453 Query: 231 aaaacttcttttcgttctatgaactttaaggtgtatgaagtctcatagttaactcttgca 290 |||| ||||||||| |||||||||| |||||||||||||| ||||| || | | || | Sbjct: 452 aaaatctcttttcgtcctatgaacttgaaggtgtatgaagtttcatatttgattttttaa 393 Query: 291 gtggaacgatagagactccatttcacttaggttgatttaatttagaccagaggcagacct 350 || || ||||||||||| ||||||||||||| ||||| ||| |||||||||||||| Sbjct: 392 gtagagcgatagagacttcatttcacttagg-----ttaatctaggccagaggcagacct 338 Query: 351 aagtcaag 358 | |||||| Sbjct: 337 acgtcaag 330 Score = 56.0 bits (28), Expect = 1e-04 Identities = 70/84 (83%) Strand = Plus / Minus Query: 16 atgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcatagattcgagag 75 ||||||| || | ||| |||||||||| |||||||||||||||| |||| || ||| | Sbjct: 662 atgcaatcaaaagaattgatcttattgataaatcaatgtcttactccataactttgaggg 603 Query: 76 aataggagaacagtagcctgacaa 99 || | ||||||| ||||||||||| Sbjct: 602 aagaagagaacaatagcctgacaa 579
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 111 bits (56), Expect = 3e-21 Identities = 185/224 (82%), Gaps = 8/224 (3%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcg-taatgaggataagggcctcca 229 |||||||||| |||| |||| | | | |||||||||| ||||||| |||||| |||| | Sbjct: 53282 ttgataaggtgaatacccagtctattcaatgctaggccataatgagtataaggacctcaa 53223 Query: 230 aaaaacttcttttcgttctatgaactttaaggtgtatgaagtctcatagttaactcttgc 289 ||||| ||||||||| |||||||||||||||||||||||| ||||| || | | || Sbjct: 53222 aaaaatctcttttcgtcatatgaactttaaggtgtatgaagtttcatatttga-ttttta 53164 Query: 290 agtggaacgatagagactccatttcacttaggttgatttaatttagaccagaggcagacc 349 || |||||||||||||| ||||| |||||||||| || ||| |||||| |||||| Sbjct: 53163 agcagaacgatagagacttcatttaacttaggttg-----atctaggccagagacagacc 53109 Query: 350 taagtcaaggtaat-cctcctttgaaacactttggtattgctcc 392 || |||||| |||| || ||||||||||||||||||| |||||| Sbjct: 53108 tacgtcaagataatcccacctttgaaacactttggtaatgctcc 53065 Score = 89.7 bits (45), Expect = 1e-14 Identities = 145/179 (81%), Gaps = 5/179 (2%) Strand = Plus / Minus Query: 409 caaaaaatcaatcagagcacagggagccatctcattatctttccgta----aagaaaaac 464 |||| ||| |||||||||||| |||||||| || |||||||| || |||||||| Sbjct: 53064 caaataatgaatcagagcacatggagccatttccttatctttttttatgtcaagaaaaaa 53005 Query: 465 tatggtggactaactgatctttaaatcagtttatgaaagagcccaatgcnnnnnnn-tgc 523 |||| ||||||||||| |||| ||||||| ||||| ||||||||||| ||| Sbjct: 53004 aatggcagactaactgatatttagatcagttaatgaaggagcccaatgcaaaaaaaatgc 52945 Query: 524 atgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgtttta 582 |||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||| Sbjct: 52944 atgttgggtctttgaaacagttcagatcattttaataataagaagtttgatctgtttta 52886
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 111 bits (56), Expect = 3e-21 Identities = 185/224 (82%), Gaps = 8/224 (3%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcg-taatgaggataagggcctcca 229 |||||||||| |||| |||| | | | |||||||||| ||||||| |||||| |||| | Sbjct: 53278 ttgataaggtgaatacccagtctattcaatgctaggccataatgagtataaggacctcaa 53219 Query: 230 aaaaacttcttttcgttctatgaactttaaggtgtatgaagtctcatagttaactcttgc 289 ||||| ||||||||| |||||||||||||||||||||||| ||||| || | | || Sbjct: 53218 aaaaatctcttttcgtcatatgaactttaaggtgtatgaagtttcatatttga-ttttta 53160 Query: 290 agtggaacgatagagactccatttcacttaggttgatttaatttagaccagaggcagacc 349 || |||||||||||||| ||||| |||||||||| || ||| |||||| |||||| Sbjct: 53159 agcagaacgatagagacttcatttaacttaggttg-----atctaggccagagacagacc 53105 Query: 350 taagtcaaggtaat-cctcctttgaaacactttggtattgctcc 392 || |||||| |||| || ||||||||||||||||||| |||||| Sbjct: 53104 tacgtcaagataatcccacctttgaaacactttggtaatgctcc 53061 Score = 89.7 bits (45), Expect = 1e-14 Identities = 145/179 (81%), Gaps = 5/179 (2%) Strand = Plus / Minus Query: 409 caaaaaatcaatcagagcacagggagccatctcattatctttccgta----aagaaaaac 464 |||| ||| |||||||||||| |||||||| || |||||||| || |||||||| Sbjct: 53060 caaataatgaatcagagcacatggagccatttccttatctttttttatgtcaagaaaaaa 53001 Query: 465 tatggtggactaactgatctttaaatcagtttatgaaagagcccaatgcnnnnnnn-tgc 523 |||| ||||||||||| |||| ||||||| ||||| ||||||||||| ||| Sbjct: 53000 aatggcagactaactgatatttagatcagttaatgaaggagcccaatgcaaaaaaaatgc 52941 Query: 524 atgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgtttta 582 |||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||| Sbjct: 52940 atgttgggtctttgaaacagttcagatcattttaataataagaagtttgatctgtttta 52882
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 111 bits (56), Expect = 3e-21 Identities = 200/246 (81%), Gaps = 7/246 (2%) Strand = Plus / Minus Query: 338 cagaggcagacctaagtcaaggtaatcctcctttgaaacactttggtattgctcctagat 397 |||| ||| ||||| |||| | ||| ||| |||||||||||||||||| |||||| |||| Sbjct: 54111 cagaagcatacctacgtcaggataacccttctttgaaacactttggtagtgctccgagat 54052 Query: 398 agatcataatacaaaaaatcaatcagagcacagggagccatctcattat-ctttccgtaa 456 || ||| ||| ||| |||||||||||| ||| ||||||| | | ||||| | | Sbjct: 54051 ---tcg-aatcaaaataatgaatcagagcacatggaaccatctccctttactttctgcca 53996 Query: 457 agaaaaactatggtggactaactgatctttaaatcagtttatgaaagagcccaatgcnnn 516 ||||||| |||||| |||||||| || | ||| ||||| ||||||||||||||||| Sbjct: 53995 agaaaaaatatggtagactaacttatttataa--cagttaatgaaagagcccaatgcaaa 53938 Query: 517 nnnntgcatgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatct 576 |||||||||||||||||||||||||||||| |||| ||||||||| ||||||||| Sbjct: 53937 aaaatgcatgttgggtctttgaaacagttcaaattattttgataataataagtttgatct 53878 Query: 577 gtttta 582 |||||| Sbjct: 53877 gtttta 53872 Score = 44.1 bits (22), Expect = 0.51 Identities = 25/26 (96%) Strand = Plus / Minus Query: 252 aactttaaggtgtatgaagtctcata 277 |||||||||||||||||||| ||||| Sbjct: 54198 aactttaaggtgtatgaagtttcata 54173 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 gagaacagtagcctgacaaa 100 |||||||||||||||||||| Sbjct: 54374 gagaacagtagcctgacaaa 54355
>emb|AJ429722.1|ISP429722 Ilex sp. Erixon and Bremer 52 chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1506 Score = 111 bits (56), Expect = 3e-21 Identities = 201/248 (81%), Gaps = 9/248 (3%) Strand = Plus / Minus Query: 337 ccagaggcagacctaagtcaaggtaatcctcctttgaaacactttggtattgctcctaga 396 ||||||||||||||| |||||| ||| || | ||||||||||||||||| ||||||| || Sbjct: 254 ccagaggcagacctacgtcaagataacccccttttgaaacactttggtagtgctcctgga 195 Query: 397 tagatcataatacaaaaaatcaatcagagcacagggagccatctcattatctttccgtaa 456 || |||||||| ||| | |||||||||| ||||||||||| || | ||| || | Sbjct: 194 g----cagaatacaaataatgactcagagcacatggagccatctcctttt--ttctgtca 141 Query: 457 agaaaaactatggtggactaactgatctttaaatcagtttatgaaagagcccaatgcnnn 516 | ||||| ||||| ||||||||||| |||| ||||||| |||||| |||||||||| Sbjct: 140 aaaaaaa-tatggcagactaactgatatttatatcagttaatgaaaaagcccaatgcaaa 82 Query: 517 nnnn--tgcatgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgat 574 ||||||||||||||||||||||||||| || ||| ||||| || | ||||||| Sbjct: 81 aaaaaatgcatgttgggtctttgaaacagttcagatttttttgataaaaaccagtttgat 22 Query: 575 ctgtttta 582 |||||||| Sbjct: 21 ctgtttta 14 Score = 97.6 bits (49), Expect = 4e-17 Identities = 88/101 (87%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| |||| |||| | | | |||||||||| ||||||| |||||| |||| || Sbjct: 415 ttgataaggtgaatacccagtctattcaatgctaggcataatgagtataaggacctcaaa 356 Query: 231 aaaacttcttttcgttctatgaactttaaggtgtatgaagt 271 |||| ||||||||| ||||||||||||||||||||||||| Sbjct: 355 aaaatatcttttcgtcctatgaactttaaggtgtatgaagt 315 Score = 50.1 bits (25), Expect = 0.008 Identities = 70/85 (82%) Strand = Plus / Minus Query: 16 atgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcatagattcgagag 75 ||||||| || | ||| |||||||||| ||||| |||||||||| |||| || ||| | Sbjct: 563 atgcaatcaaaagaattgatcttattgagaaatcgatgtcttactccataactttgaggg 504 Query: 76 aataggagaacagtagcctgacaaa 100 || | ||||||| |||||||||||| Sbjct: 503 aacaagagaacaatagcctgacaaa 479
>emb|AJ429715.1|TAU429715 Tribeles australis chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1492 Score = 111 bits (56), Expect = 3e-21 Identities = 107/125 (85%), Gaps = 1/125 (0%) Strand = Plus / Minus Query: 459 aaaaactatggtggactaactgatctttaaatcagtttatgaaagagcccaatgcnnnnn 518 ||||| ||||| ||||| ||||| |||| ||||||| ||||||||||||||||| Sbjct: 138 aaaaaatatggcggactggctgatatttatatcagttaatgaaagagcccaatgcacaaa 79 Query: 519 nn-tgcatgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctg 577 ||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||| Sbjct: 78 aaatgcatgttgggtctttgaaacagttcagatcattttgataataatcagtttgatctg 19 Query: 578 tttta 582 ||||| Sbjct: 18 tttta 14 Score = 87.7 bits (44), Expect = 4e-14 Identities = 154/188 (81%), Gaps = 7/188 (3%) Strand = Plus / Minus Query: 198 aatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaacttt 257 |||||||||| || |||| |||||| |||| |||||| | ||||||| ||||||||||| Sbjct: 398 aatgctaggcatactgagtataaggacctcaaaaaaatcttttttcgtcctatgaacttt 339 Query: 258 aaggtgtatgaagtctcatagttaactcttgcagtggaacgatagagactccatttcact 317 |||||||||| ||| |||| || | | || || || ||||||||||| ||||| ||| Sbjct: 338 aaggtgtatggagtttcatctttga-tttttaagcagagcgatagagacttcatttaact 280 Query: 318 taggttgatttaatttagaccagaggcagacctaagtcaaggtaatcctcctttgaaaca 377 |||| ||||| ||| ||||||||||||||| |||||| ||| || ||||||||||| Sbjct: 279 tagg-----ttaatctaggccagaggcagacctacgtcaagataa-ccccctttgaaaca 226 Query: 378 ctttggta 385 |||||||| Sbjct: 225 ctttggta 218 Score = 58.0 bits (29), Expect = 3e-05 Identities = 71/85 (83%) Strand = Plus / Minus Query: 16 atgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcatagattcgagag 75 ||||||| || | ||| |||||||||| ||||| |||||||||| |||| || ||| | Sbjct: 579 atgcaatcaaaagaattgatcttattgagaaatcgatgtcttactccataactttgaggg 520 Query: 76 aataggagaacagtagcctgacaaa 100 || ||||||||| |||||||||||| Sbjct: 519 aacaggagaacaatagcctgacaaa 495
>emb|AJ429709.1|DSP429709 Desfontainia spinosa chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1470 Score = 111 bits (56), Expect = 3e-21 Identities = 179/216 (82%), Gaps = 8/216 (3%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| |||| |||| | | | |||||||||| ||||||| |||||| |||| || Sbjct: 417 ttgataaggtgaatacccagtctattcaatgctaggcataatgagtataaggacctcaaa 358 Query: 231 aaaact-tcttttcgttctatgaactttaaggtgtatgaagtctcatagttaactcttgc 289 |||| | ||||||||| ||||||||||||||||||||||||| ||||| || | | || Sbjct: 357 aaaaatctcttttcgtcctatgaactttaaggtgtatgaagtgtcatatttga-ttttta 299 Query: 290 agtggaacgatagagactccatttcacttaggttgatttaatttagaccagaggcagacc 349 || || ||||||||||| ||||| ||||||| ||||| ||| ||||||||||||| Sbjct: 298 agctgagcgatagagacttcatttaacttagg-----ttaatctaggccagaggcagacc 244 Query: 350 taagtcaaggtaatcctcctttgaaacactttggta 385 || |||||| ||| || || |||||||||||||||| Sbjct: 243 tacgtcaagataa-cccccattgaaacactttggta 209 Score = 95.6 bits (48), Expect = 2e-16 Identities = 105/125 (84%), Gaps = 1/125 (0%) Strand = Plus / Minus Query: 459 aaaaactatggtggactaactgatctttaaatcagtttatgaaagagcccaatgcnnnnn 518 ||||| ||||| ||||| ||||| |||| ||||||| ||||||||||||||||| Sbjct: 138 aaaaaatatggcggactggctgatatttatatcagttaatgaaagagcccaatgcacaaa 79 Query: 519 nn-tgcatgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctg 577 |||| |||||||||||||||||||||| ||||||| ||||||||| |||||||||| Sbjct: 78 aaatgcacgttgggtctttgaaacagttcagatcattttgataataataagtttgatctg 19 Query: 578 tttta 582 ||||| Sbjct: 18 tttta 14 Score = 48.1 bits (24), Expect = 0.032 Identities = 57/68 (83%) Strand = Plus / Minus Query: 33 gatcttattgcaaaatcaatgtcttacttcatagattcgagagaataggagaacagtagc 92 |||||||||| ||||| |||||||||| |||| || ||| ||| | ||||||| |||| Sbjct: 553 gatcttattgagaaatcgatgtcttactccataactttgagggaacaagagaacaatagc 494 Query: 93 ctgacaaa 100 |||||||| Sbjct: 493 ctgacaaa 486
>emb|AJ429706.1|MCA429706 Montinia caryophyllacea chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1528 Score = 111 bits (56), Expect = 3e-21 Identities = 183/224 (81%), Gaps = 6/224 (2%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| |||| |||| | | | |||||||||| ||||||| |||||| |||| || Sbjct: 428 ttgataaggtgaatacccagtctattcaatgctaggcttaatgagtataaggacctcaaa 369 Query: 231 aaaacttcttttcgttctatgaactttaaggtgtatgaagtctcatagttaactcttgca 290 |||| |||||||| ||||||||||||||||||||||||| ||||| || | | || | Sbjct: 368 aaaatctcttttcgccctatgaactttaaggtgtatgaagtttcatatttgattttttaa 309 Query: 291 gtggaacgatagagactccatttcacttaggttgatttaatttagaccagaggcagacct 350 |||||||||||||| ||||| |||||||||| || ||| ||| |||||||||| Sbjct: 308 acagaacgatagagacttcatttaacttaggttg-----atctaggccataggcagacct 254 Query: 351 aagtcaaggtaatc-ctcctttgaaacactttggtattgctcct 393 | |||||| ||| | | || |||||||||||||||| ||||||| Sbjct: 253 acgtcaagataacctcacccttgaaacactttggtagtgctcct 210 Score = 99.6 bits (50), Expect = 1e-17 Identities = 83/95 (87%), Gaps = 1/95 (1%) Strand = Plus / Minus Query: 489 atcagtttatgaaagagcccaatgc-nnnnnnntgcatgttgggtctttgaaacagttca 547 ||||||| ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 108 atcagttaatgaaagagcccaatgcaaaaaaaatgcatgttgggtctttgaaacagttca 49 Query: 548 aatcatttcgataataatccgtttgatctgtttta 582 ||||||| ||||| |||||||||||||||||||| Sbjct: 48 gatcattttgataaaaatccgtttgatctgtttta 14
>gb|DQ317523.1| Glycine max cultivar PI 437654 chloroplast, complete genome Length = 152218 Score = 109 bits (55), Expect = 1e-20 Identities = 202/249 (81%), Gaps = 7/249 (2%) Strand = Plus / Plus Query: 337 ccagaggcagacctaagtcaaggtaatcctcctttgaaacactttggtattgctcctaga 396 ||||| ||||||||| |||||| ||||||| |||||||||||||||||| ||||| |||| Sbjct: 10202 ccagaagcagacctacgtcaagataatccttctttgaaacactttggtagtgctcttaga 10261 Query: 397 tagatcataatacaaa-aaatcaatcagagcacagggagccatctcatta-tctttccgt 454 | | |||| |||| ||| |||||||||| ||||| |||||| ||| |||| | || Sbjct: 10262 ttg----taatccaaataaaaaaatcagagcatagggaatcatctctttattcttgctgt 10317 Query: 455 aaagaaaaactatggtggactaactgatctttaaatcagtttatgaaagagcccaatgc- 513 |||||||| |||||||||||||| || ||| ||||||| |||||| ||| |||||| Sbjct: 10318 caagaaaaaagatggtggactaactaatatttctatcagttaatgaaaaagctcaatgca 10377 Query: 514 nnnnnnntgcatgttgggtctttgaaacagttcaaatcatttcgataataatccgtttga 573 |||| ||||||| ||| ||||| |||||||||||| |||||||||| |||||| Sbjct: 10378 aaaaaaatgcacgttgggtttttaaaacaattcaaatcatttagataataatcagtttga 10437 Query: 574 tctgtttta 582 | ||||||| Sbjct: 10438 tttgtttta 10446 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 248 tatgaactttaaggtgtatgaagtctcat 276 |||||||||||||||||||||||| |||| Sbjct: 10108 tatgaactttaaggtgtatgaagtgtcat 10136
>emb|AJ429683.1|SSP429683 Dipentodon sinicus chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1531 Score = 109 bits (55), Expect = 1e-20 Identities = 206/255 (80%), Gaps = 13/255 (5%) Strand = Plus / Minus Query: 337 ccagaggcagacctaagtcaaggtaatcctc--ctttgaaacactttggtattgctccta 394 ||||||||||||||| |||||| ||| || | |||||||||||||||||| ||||||| Sbjct: 264 ccagaggcagacctacgtcaagataaaccccacctttgaaacactttggtagtgctcctg 205 Query: 395 gatagatcataatacaaaa-aatcaatcagagcacagggagccatctcattatctt---- 449 ||| || ||| | ||| ||| |||||||||| | ||||||||||| ||||||| Sbjct: 204 gat----cagaatcccaaataatgaatcagagcatatggagccatctccttatcttattt 149 Query: 450 -tccgtaaagaaaaactatggtggactaactgatctttaaatcagtttatgaaagagccc 508 || || |||||||| | ||| ||| | |||||| ||| ||||||| |||||||||||| Sbjct: 148 ttctgtcaagaaaaaatctggcggattgactgatatttctatcagttaatgaaagagccc 89 Query: 509 aatgcnnnnnnn-tgcatgttgggtctttgaaacagttcaaatcatttcgataataatcc 567 ||||| ||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 88 aatgcaaaaaaaatgcatgttgggtctttgaaacagttcagatcattttgataataanaa 29 Query: 568 gtttgatctgtttta 582 ||||||||||||||| Sbjct: 28 gtttgatctgtttta 14 Score = 91.7 bits (46), Expect = 2e-15 Identities = 104/122 (85%), Gaps = 1/122 (0%) Strand = Plus / Minus Query: 198 aatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaacttt 257 |||||||||| ||||||| |||||| |||| |||||| ||||||||| ||||||||||| Sbjct: 396 aatgctaggcataatgagtataaggtcctc-aaaaaatatcttttcgtcctatgaacttt 338 Query: 258 aaggtgtatgaagtctcatagttaactcttgcagtggaacgatagagactccatttcact 317 |||||||||||||| ||||| || | | || || |||||||||||||| ||||| ||| Sbjct: 337 aaggtgtatgaagtttcatatttgattttttaagccgaacgatagagacttcatttaact 278 Query: 318 ta 319 || Sbjct: 277 ta 276
>emb|AJ429680.1|AMA429680 Avicennia marina chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1497 Score = 109 bits (55), Expect = 1e-20 Identities = 204/253 (80%), Gaps = 11/253 (4%) Strand = Plus / Minus Query: 337 ccagaggcagacctaagtcaaggtaatcct-cctttgaaacactttggtattgctcctag 395 ||||||||||||||| |||||| ||| || || |||||||||||||||| ||||||| | Sbjct: 262 ccagaggcagacctacgtcaagataaccccacccttgaaacactttggtagtgctcctgg 203 Query: 396 atagatcataatacaaaaa-atcaatcagagcacagggagccatctcattatc-----tt 449 || || ||| | ||| || |||||||||||| |||||||||| ||||| || Sbjct: 202 at----cagaattccaaatgatgaatcagagcacatggagccatcttcttatcctatttt 147 Query: 450 tccgtaaagaaaaactatggtggactaactgatctttaaatcagtttatgaaagagccca 509 || || | |||||| |||||||| | |||||| || ||||||| ||||||||||||| Sbjct: 146 tctgtcacgaaaaaacatggtggattggctgatcgttctatcagttaatgaaagagccca 87 Query: 510 atgcnnnnnnntgcatgttgggtctttgaaacagttcaaatcatttcgataataatccgt 569 |||| |||||||||||||||||||||||||| ||||||| |||||||||| || Sbjct: 86 atgcaaaaaaatgcatgttgggtctttgaaacagttccgatcattttgataataatcagt 27 Query: 570 ttgatctgtttta 582 ||||||||||||| Sbjct: 26 ttgatctgtttta 14 Score = 67.9 bits (34), Expect = 3e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 228 caaaaaacttcttttcgttctatgaactttaaggtgtatgaagtctcata 277 ||||||| ||||||||| ||||||||||||||||||||||||| ||||| Sbjct: 377 caaaaaatctcttttcgtcctatgaactttaaggtgtatgaagtttcata 328
>emb|AJ429531.1|SAR429531 Scrophularia arguta chloroplast atpE gene (partial), tRNA-Met gene and tRNA-Val gene Length = 1448 Score = 109 bits (55), Expect = 1e-20 Identities = 200/247 (80%), Gaps = 14/247 (5%) Strand = Plus / Minus Query: 328 taatttagaccagaggcagacctaagtcaaggtaatcct-cctttgaaacactttggtat 386 |||| ||| ||||||||| ||||| |||||| ||| || ||||||||||||||||||| Sbjct: 253 taatctaggccagaggcaaacctacgtcaagataaccccacctttgaaacactttggtag 194 Query: 387 tgctcctagatagatcataatacaaaa-aatcaatcagagcacagggagccatctcatta 445 ||||||| ||| || ||| | ||| ||| ||||||||||| ||||||||||| ||| Sbjct: 193 tgctcctggat----cagaatcccaaataatgaatcagagcacgtggagccatctcctta 138 Query: 446 tctt-----tccgtaaagaaaaactatggtggactaactgatctttaaatcagtttatga 500 |||| || || |||||||| ||||| ||| |||||||||||| ||||||| |||| Sbjct: 137 tcttatttttctgtcaagaaaaaatatggcggattaactgatctttctatcagttaatga 78 Query: 501 aagagcccaatgc---nnnnnnntgcatgttgggtctttgaaacagttcaaatcatttcg 557 ||||||||||||| ||||||||||||||||||||||||||| ||||||| | Sbjct: 77 aagagcccaatgcaaaaaaaaaatgcatgttgggtctttgaaacagttcagatcattttg 18 Query: 558 ataataa 564 ||||||| Sbjct: 17 ataataa 11 Score = 87.7 bits (44), Expect = 4e-14 Identities = 72/80 (90%), Gaps = 1/80 (1%) Strand = Plus / Minus Query: 198 aatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaacttt 257 |||||||||| ||||||| |||||| |||| ||||| || |||||||| ||||||||||| Sbjct: 382 aatgctaggcataatgagtataaggtcctcaaaaaatct-cttttcgtcctatgaacttt 324 Query: 258 aaggtgtatgaagtctcata 277 |||||||||||||| ||||| Sbjct: 323 aaggtgtatgaagtttcata 304
>gb|AY714625.1| Castanopsis carlesii trnVM6 tRNA-Val and trnV-trnM intergenic spacer, partial sequence; chloroplast Length = 862 Score = 107 bits (54), Expect = 4e-20 Identities = 125/150 (83%), Gaps = 2/150 (1%) Strand = Plus / Minus Query: 418 aatcagagcacagggagccatctcattatctttccgtaaagaaaaactatggtggactaa 477 |||| ||||||| ||||||||||| |||||||| || |||||||| |||||| ||||| Sbjct: 156 aatccgagcacacggagccatctctttatctttatgtcaagaaaaaatatggtagactag 97 Query: 478 ctgatctttaaatcagtttatgaaagagcccaatg--cnnnnnnntgcatgttgggtctt 535 | ||| ||| ||||||||||||||||||||||| | ||||||||||||||| Sbjct: 96 ccgatatttctttcagtttatgaaagagcccaatgcacaaaaaaatgcatgttgggtctt 37 Query: 536 tgaaacagttcaaatcatttcgataataat 565 |||||| ||||||||||||| ||||||||| Sbjct: 36 tgaaacggttcaaatcattttgataataat 7 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 343 gcagacctaagtcaaggtaatcctcctttgaaacactttggtattgctcct 393 ||||||||| |||| | ||||||| |||||||||||||||||| ||||||| Sbjct: 229 gcagacctacgtcaggataatccttctttgaaacactttggtagtgctcct 179 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 248 tatgaactttaaggtgtatgaagtctcata 277 ||||| |||||||||||||||||| ||||| Sbjct: 334 tatgagctttaaggtgtatgaagtttcata 305
>gb|AY714624.1| Castanopsis carlesii trnVM5 tRNA-Val and trnV-trnM intergenic spacer, partial sequence; chloroplast Length = 862 Score = 107 bits (54), Expect = 4e-20 Identities = 125/150 (83%), Gaps = 2/150 (1%) Strand = Plus / Minus Query: 418 aatcagagcacagggagccatctcattatctttccgtaaagaaaaactatggtggactaa 477 |||| ||||||| ||||||||||| |||||||| || |||||||| |||||| ||||| Sbjct: 156 aatccgagcacacggagccatctctttatctttatgtcaagaaaaaatatggtagactag 97 Query: 478 ctgatctttaaatcagtttatgaaagagcccaatg--cnnnnnnntgcatgttgggtctt 535 | ||| ||| ||||||||||||||||||||||| | ||||||||||||||| Sbjct: 96 ccgatatttctttcagtttatgaaagagcccaatgcacaaaaaaatgcatgttgggtctt 37 Query: 536 tgaaacagttcaaatcatttcgataataat 565 |||||| ||||||||||||| ||||||||| Sbjct: 36 tgaaacggttcaaatcattttgataataat 7 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 343 gcagacctaagtcaaggtaatcctcctttgaaacactttggtattgctcct 393 ||||||||| |||| | ||||||| |||||||||||||||||| ||||||| Sbjct: 229 gcagacctacgtcaggataatccttctttgaaacactttggtagtgctcct 179 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 248 tatgaactttaaggtgtatgaagtctcata 277 ||||| |||||||||||||||||| ||||| Sbjct: 334 tatgagctttaaggtgtatgaagtttcata 305
>gb|AY714623.1| Castanopsis carlesii trnVM4 tRNA-Val and trnV-trnM intergenic spacer, partial sequence; chloroplast Length = 862 Score = 107 bits (54), Expect = 4e-20 Identities = 125/150 (83%), Gaps = 2/150 (1%) Strand = Plus / Minus Query: 418 aatcagagcacagggagccatctcattatctttccgtaaagaaaaactatggtggactaa 477 |||| ||||||| ||||||||||| |||||||| || |||||||| |||||| ||||| Sbjct: 156 aatccgagcacacggagccatctctttatctttatgtcaagaaaaaatatggtagactag 97 Query: 478 ctgatctttaaatcagtttatgaaagagcccaatg--cnnnnnnntgcatgttgggtctt 535 | ||| ||| ||||||||||||||||||||||| | ||||||||||||||| Sbjct: 96 ccgatatttctttcagtttatgaaagagcccaatgcacaaaaaaatgcatgttgggtctt 37 Query: 536 tgaaacagttcaaatcatttcgataataat 565 |||||| ||||||||||||| ||||||||| Sbjct: 36 tgaaacggttcaaatcattttgataataat 7 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 343 gcagacctaagtcaaggtaatcctcctttgaaacactttggtattgctcct 393 ||||||||| |||| | ||||||| |||||||||||||||||| ||||||| Sbjct: 229 gcagacctacgtcaggataatccttctttgaaacactttggtagtgctcct 179
>gb|AY714622.1| Castanopsis carlesii trnVM3 tRNA-Val and trnV-trnM intergenic spacer, partial sequence; chloroplast Length = 862 Score = 107 bits (54), Expect = 4e-20 Identities = 125/150 (83%), Gaps = 2/150 (1%) Strand = Plus / Minus Query: 418 aatcagagcacagggagccatctcattatctttccgtaaagaaaaactatggtggactaa 477 |||| ||||||| ||||||||||| |||||||| || |||||||| |||||| ||||| Sbjct: 156 aatccgagcacacggagccatctctttatctttatgtcaagaaaaaatatggtagactag 97 Query: 478 ctgatctttaaatcagtttatgaaagagcccaatg--cnnnnnnntgcatgttgggtctt 535 | ||| ||| ||||||||||||||||||||||| | ||||||||||||||| Sbjct: 96 ccgatatttctttcagtttatgaaagagcccaatgcacaaaaaaatgcatgttgggtctt 37 Query: 536 tgaaacagttcaaatcatttcgataataat 565 |||||| ||||||||||||| ||||||||| Sbjct: 36 tgaaacggttcaaatcattttgataataat 7 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 343 gcagacctaagtcaaggtaatcctcctttgaaacactttggtattgctcct 393 ||||||||| |||| | ||||||| |||||||||||||||||| ||||||| Sbjct: 229 gcagacctacgtcaggataatccttctttgaaacactttggtagtgctcct 179 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 248 tatgaactttaaggtgtatgaagtctcata 277 ||||| |||||||||||||||||| ||||| Sbjct: 334 tatgagctttaaggtgtatgaagtttcata 305
>gb|AY714621.1| Castanopsis carlesii trnVM2 tRNA-Val and trnV-trnM intergenic spacer, partial sequence; chloroplast Length = 862 Score = 107 bits (54), Expect = 4e-20 Identities = 125/150 (83%), Gaps = 2/150 (1%) Strand = Plus / Minus Query: 418 aatcagagcacagggagccatctcattatctttccgtaaagaaaaactatggtggactaa 477 |||| ||||||| ||||||||||| |||||||| || |||||||| |||||| ||||| Sbjct: 156 aatccgagcacacggagccatctctttatctttatgtcaagaaaaaatatggtagactag 97 Query: 478 ctgatctttaaatcagtttatgaaagagcccaatg--cnnnnnnntgcatgttgggtctt 535 | ||| ||| ||||||||||||||||||||||| | ||||||||||||||| Sbjct: 96 ccgatatttctttcagtttatgaaagagcccaatgcacaaaaaaatgcatgttgggtctt 37 Query: 536 tgaaacagttcaaatcatttcgataataat 565 |||||| ||||||||||||| ||||||||| Sbjct: 36 tgaaacggttcaaatcattttgataataat 7 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 343 gcagacctaagtcaaggtaatcctcctttgaaacactttggtattgctcct 393 ||||||||| |||| | ||||||| |||||||||||||||||| ||||||| Sbjct: 229 gcagacctacgtcaggataatccttctttgaaacactttggtagtgctcct 179 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 248 tatgaactttaaggtgtatgaagtctcata 277 ||||| |||||||||||||||||| ||||| Sbjct: 334 tatgagctttaaggtgtatgaagtttcata 305
>gb|AY714620.1| Castanopsis carlesii trnVM1 tRNA-Val and trnV-trnM intergenic spacer, partial sequence; chloroplast Length = 862 Score = 107 bits (54), Expect = 4e-20 Identities = 125/150 (83%), Gaps = 2/150 (1%) Strand = Plus / Minus Query: 418 aatcagagcacagggagccatctcattatctttccgtaaagaaaaactatggtggactaa 477 |||| ||||||| ||||||||||| |||||||| || |||||||| |||||| ||||| Sbjct: 156 aatccgagcacacggagccatctctttatctttatgtcaagaaaaaatatggtagactag 97 Query: 478 ctgatctttaaatcagtttatgaaagagcccaatg--cnnnnnnntgcatgttgggtctt 535 | ||| ||| ||||||||||||||||||||||| | ||||||||||||||| Sbjct: 96 ccgatatttctttcagtttatgaaagagcccaatgcacaaaaaaatgcatgttgggtctt 37 Query: 536 tgaaacagttcaaatcatttcgataataat 565 |||||| ||||||||||||| ||||||||| Sbjct: 36 tgaaacggttcaaatcattttgataataat 7 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 343 gcagacctaagtcaaggtaatcctcctttgaaacactttggtattgctcct 393 ||||||||| |||| | ||||||| |||||||||||||||||| ||||||| Sbjct: 229 gcagacctacgtcaggataatccttctttgaaacactttggtagtgctcct 179 Score = 44.1 bits (22), Expect = 0.51 Identities = 28/30 (93%) Strand = Plus / Minus Query: 248 tatgaactttaaggtgtatgaagtctcata 277 ||||| |||||||||||||||||| ||||| Sbjct: 334 tatgagctttaaggtgtatgaagtttcata 305
>emb|AJ429679.1|ALO429679 Acanthus longifolius chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1452 Score = 107 bits (54), Expect = 4e-20 Identities = 206/255 (80%), Gaps = 13/255 (5%) Strand = Plus / Minus Query: 337 ccagaggcagacctaagtcaaggtaatcct-cctttgaaacactttggtattgctcctag 395 ||||||||||||||| |||||| ||| || || ||||||||| |||||| ||||||||| Sbjct: 264 ccagaggcagacctacgtcaagataaccccacccttgaaacaccttggtagtgctcctag 205 Query: 396 atagatcataatacaaaa-aatcaatcagagcacagggagccatctcattatctt----- 449 || || ||| | ||| ||| |||||||||||| ||||||||||| ||||||| Sbjct: 204 at----cagaatcccaaataatgaatcagagcacacggagccatctccttatcttatttt 149 Query: 450 tccgtaaagaaaaactatggtggactaactgatctttaaatcagtttatgaaagagccca 509 || | |||||||| ||||||||| || ||||| ||| |||||| ||||||||||||| Sbjct: 148 tctgccaagaaaaaatatggtggattagctgatatttctttcagttaatgaaagagccca 89 Query: 510 atgcnnnnnnn--tgcatgttgggtctttgaaacagttcaaatcatttcgataataatcc 567 |||| ||||||||||||||||||||||||||| ||||||| ||||||||| Sbjct: 88 atgcaaaaaaagatgcatgttgggtctttgaaacagttcagatcattttgataataataa 29 Query: 568 gtttgatctgtttta 582 | ||||||||||||| Sbjct: 28 ggttgatctgtttta 14 Score = 71.9 bits (36), Expect = 2e-09 Identities = 70/80 (87%), Gaps = 1/80 (1%) Strand = Plus / Minus Query: 198 aatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaacttt 257 |||||||| | ||||||| |||||| |||| |||||| ||||||||| |||||||||| Sbjct: 401 aatgctagtcataatgagtataaggtcctc-aaaaaatatcttttcgtcttatgaacttt 343 Query: 258 aaggtgtatgaagtctcata 277 |||||||||||||| ||||| Sbjct: 342 aaggtgtatgaagtttcata 323
>emb|AJ429668.1|ISE429668 Icacina senegalensis chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1559 Score = 107 bits (54), Expect = 4e-20 Identities = 233/290 (80%), Gaps = 15/290 (5%) Strand = Plus / Minus Query: 297 cgatagagactccatttcacttaggttgatttaatttagaccagaggcagacctaagtca 356 ||||||||||| ||||| |||||||||||| || | ||||||||| ||||| |||| Sbjct: 292 cgatagagacttcatttaacttaggttgatcta-----ggccagaggcaaacctacgtca 238 Query: 357 aggtaatcctcctttgaaacactttggtattgctcctagatagatcata-atacaaaaaa 415 || ||| || | |||||||||||||||| ||||||| ||| || | || |||| || Sbjct: 237 agataaccccc--ttgaaacactttggtagtgctcctggat----cagagatccaaataa 184 Query: 416 tcaatcagagcacagggagccatctcattatctttccgtaaagaaaaac-tatggtggac 474 | |||||||||||| ||||||||||| |||| | || || |||||||| ||||| || Sbjct: 183 tgaatcagagcacatggagccatctccttatttctctgtcaagaaaaaaatatggcaaac 124 Query: 475 taactgatctttaaatcagtttatgaaagagcccaatgcnnnnnnn--tgcatgttgggt 532 | ||||| ||| ||||||| ||||||||||||||||| |||||||||||| Sbjct: 123 tggctgatatttctatcagttaatgaaagagcccaatgcaaaaaaaaatgcatgttgggt 64 Query: 533 ctttgaaacagttcaaatcatttcgataataatccgtttgatctgtttta 582 ||||||||||||||| ||||||| ||||||||| ||||||||||||||| Sbjct: 63 ctttgaaacagttcagatcattttgataataataagtttgatctgtttta 14 Score = 93.7 bits (47), Expect = 6e-16 Identities = 93/107 (86%), Gaps = 1/107 (0%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| |||| |||||| | | |||||||||| ||||||| |||||| ||| || Sbjct: 422 ttgataaggtgaatacccagcctattcaatgctaggcataatgagtataaggatctcaaa 363 Query: 231 aaaacttcttttcgttctatgaactttaaggtgtatgaagtctcata 277 ||| || |||||||| ||||||||||||||||||||||||| ||||| Sbjct: 362 aaatct-cttttcgtcctatgaactttaaggtgtatgaagtttcata 317
>emb|AJ506156.2|ATR506156 Amborella trichopoda chloroplast genomic DNA, complete sequence Length = 162686 Score = 105 bits (53), Expect = 2e-19 Identities = 130/155 (83%), Gaps = 3/155 (1%) Strand = Plus / Minus Query: 161 gatttgctagttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataa 220 |||||| || |||||||||| |||| ||| ||| | |||||||||| ||||||| || Sbjct: 57661 gatttgataattgataaggtgaatacccaatccattcaatgctaggcttaatgagtatgg 57602 Query: 221 gggcctccaaaaaact---tcttttcgttctatgaactttaaggtgtatgaagtctcata 277 || |||| ||| ||| ||||||||| ||||||||||| ||||||||||||| ||||| Sbjct: 57601 ggacctcaaaagaacaacctcttttcgtcctatgaactttgaggtgtatgaagtatcata 57542 Query: 278 gttaactcttgcagtggaacgatagagactccatt 312 || |||||||||| |||||||||||||||||||| Sbjct: 57541 tttgactcttgcagcggaacgatagagactccatt 57507 Score = 91.7 bits (46), Expect = 2e-15 Identities = 58/62 (93%) Strand = Plus / Minus Query: 521 tgcatgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgttt 580 |||||||||||| ||||||||||||| |||||||| |||||||||| ||||||||||||| Sbjct: 57309 tgcatgttgggtttttgaaacagttcgaatcattttgataataatcagtttgatctgttt 57250 Query: 581 ta 582 || Sbjct: 57249 ta 57248 Score = 85.7 bits (43), Expect = 1e-13 Identities = 65/71 (91%), Gaps = 1/71 (1%) Strand = Plus / Minus Query: 443 ttatctttccgtaaagaaaaactatggtggactaactgatctttaaatcagtttatgaaa 502 ||||||||| ||||||||||| ||||||||||||||||||||| ||||||| |||||| Sbjct: 57393 ttatctttctgtaaagaaaaag-atggtggactaactgatctttccatcagttgatgaaa 57335 Query: 503 gagcccaatgc 513 ||||||||||| Sbjct: 57334 gagcccaatgc 57324 Score = 60.0 bits (30), Expect = 9e-06 Identities = 50/56 (89%), Gaps = 3/56 (5%) Strand = Plus / Minus Query: 337 ccagaggcagacctaagtcaaggtaatcctcctttgaaacactttggtattgctcc 392 ||||| ||||||||| |||||||||| ||| ||||||||||||||||||||||| Sbjct: 57492 ccagaagcagacctacgtcaaggtaaccct---ttgaaacactttggtattgctcc 57440
>emb|AJ429716.1|AGR429716 Apium graveolens chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1477 Score = 105 bits (53), Expect = 2e-19 Identities = 305/386 (79%), Gaps = 14/386 (3%) Strand = Plus / Minus Query: 198 aatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaacttt 257 |||||||||| ||||||| | |||| ||| |||||| |||||||| ||||||||||| Sbjct: 386 aatgctaggcataatgagtacaaggatctcaaaaaaagatcttttcgccctatgaacttt 327 Query: 258 aaggtgtatgaagtctcatagttaactcttgcagtggaacgatagagactccatttcact 317 ||||||||| |||| ||||| || | | || || || ||||||||||| ||| | ||| Sbjct: 326 aaggtgtatcaagtttcatatttca-tttttaagcagagcgatagagacttcatctaact 268 Query: 318 taggttgatttaatttagaccagaggcagacctaagtcaaggtaatcctcctttgaaaca 377 ||||| ||| ||| ||||||||||||||| |||||| || || ||||||||||| Sbjct: 267 gaggtt-----aatctaggccagaggcagacctacgtcaagata--ccccctttgaaaca 215 Query: 378 ctttggtattgctcctagatagatcataatacaaaaaatcaatcagagcacagggagcca 437 |||||||| || ||| | ||||| ||| ||| ||| | |||||||||| ||||||| Sbjct: 214 ctttggtagtgttcc----tggatcagaattaaaataatgactcagagcacatggagcca 159 Query: 438 tctcattatctttccgtaaagaaaaactatggtggactaactgatctttaaatcagttta 497 |||| ||| |||| | || ||||| ||||| |||||||||| | | ||||||| | Sbjct: 158 tctc-ctatttttctatcaaaaaaaaatatggcggactaactgttagaaatatcagttaa 100 Query: 498 tgaaagagcccaatgc-nnnnnnntgcatgttgggtctttgaaacagttcaaatcatttc 556 |||||||||||||||| ||||||||||||||||||||||||||| ||||||| Sbjct: 99 tgaaagagcccaatgcacaaaaaatgcatgttgggtctttgaaacagttcagatcatttt 40 Query: 557 gataataatccgtttgatctgtttta 582 |||||||| ||||||| ||||||| Sbjct: 39 gataataaaaagtttgatatgtttta 14
>emb|AJ429534.1|SZE429534 Sphenoclea zeylanica chloroplast atpE gene (partial), tRNA-Met gene and tRNA-Val gene Length = 1543 Score = 105 bits (53), Expect = 2e-19 Identities = 219/270 (81%), Gaps = 12/270 (4%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| |||| |||| | | | |||||||||| ||||||| |||||| |||| || Sbjct: 396 ttgataaggtgaatacccagtctattcaatgctaggcataatgagtataaggacctcaaa 337 Query: 231 aaaacttcttttcgttctatgaactttaaggtgtatgaagtctcatagttaactcttgca 290 ||| || |||||||| |||||||||||||||||||||||| ||||| | | | || | Sbjct: 336 aaatct-cttttcgtcttatgaactttaaggtgtatgaagtttcatattcgattttttaa 278 Query: 291 gtggaacgatagagactccatttcacttaggttgatttaatttagaccagaggcagacct 350 | ||||||||||||||| |||| ||||||| ||||| ||| |||||||||||||| Sbjct: 277 gcggaacgatagagacttgatttaacttagg-----ttaatctaggccagaggcagacct 223 Query: 351 aagtcaaggtaa-tcctcctttgaaacactttggtattgctcctagatagatcataatac 409 | |||||| || || || |||||||||||||||| |||||| | ||||| ||| | Sbjct: 222 acgtcaagacaaccccgcccttgaaacactttggtagtgctcc----tggatcagaatcc 167 Query: 410 aaaa-aatcaatcagagcacagggagccat 438 |||| ||| |||||||||||| |||||||| Sbjct: 166 aaaataatgaatcagagcacatggagccat 137 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 521 tgcatgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatct 576 ||||||||||||||||||||||||||| ||||||| ||||| ||| ||||||||| Sbjct: 56 tgcatgttgggtctttgaaacagttcagatcattttgataamaataagtttgatct 1 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 472 gactaactgatctttaaatcagtttatgaaagagcccaatgc 513 ||||||||||| ||| ||||||| ||||||||||||||||| Sbjct: 111 gactaactgatatttctatcagttaatgaaagagcccaatgc 70
>emb|AJ429733.1|PLU429733 Phelline lucida chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1508 Score = 103 bits (52), Expect = 6e-19 Identities = 106/125 (84%), Gaps = 1/125 (0%) Strand = Plus / Minus Query: 459 aaaaactatggtggactaactgatctttaaatcagtttatgaaagagcccaatgcnnnnn 518 ||||| ||||| ||||| |||||| |||| ||||||| ||||||||||||||||| Sbjct: 138 aaaaaatatggcggactgactgatatttatatcagttaatgaaagagcccaatgcacaaa 79 Query: 519 nn-tgcatgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctg 577 ||||||||||||||||||||||||||| ||||||| ||||||||| ||||| |||| Sbjct: 78 aaatgcatgttgggtctttgaaacagttcagatcattttgataataataagtttggtctg 19 Query: 578 tttta 582 ||||| Sbjct: 18 tttta 14 Score = 83.8 bits (42), Expect = 6e-13 Identities = 144/176 (81%), Gaps = 7/176 (3%) Strand = Plus / Minus Query: 211 atgaggataagggcctccaaaaaact-tcttttcgttctatgaactttaaggtgtatgaa 269 ||||| |||||| |||| |||||| ||||||||| ||||||||||||||||||||||| Sbjct: 384 atgagtataaggacctcmaaaaaaaaatcttttcgtcctatgaactttaaggtgtatgaa 325 Query: 270 gtctcatagttaactcttgcagtggaacgatagagactccatttcacttaggttgattta 329 || ||||| || | | || || || ||||||||||| ||||| ||||||| ||| Sbjct: 324 gtttcatatttga-tttttaagcagagcgatagagacttcatttaacttagg-----tta 271 Query: 330 atttagaccagaggcagacctaagtcaaggtaatcctcctttgaaacactttggta 385 || ||| ||||||||||||||| |||||| ||| || || |||||| ||||||||| Sbjct: 270 atctaggccagaggcagacctacgtcaagataacccccccttgaaaaactttggta 215 Score = 56.0 bits (28), Expect = 1e-04 Identities = 91/112 (81%), Gaps = 5/112 (4%) Strand = Plus / Minus Query: 16 atgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcatagattcgagag 75 ||||||| || | ||| |||||||||| ||||| |||||||||| |||| || ||| | Sbjct: 569 atgcaatcaaaagaattgatcttattgagaaatcgatgtcttactccataactttgaggg 510 Query: 76 aataggagaacagtagcctgacaaacagtcggttcagtccgattcaggtgcc 127 || | ||||||| |||||||||||| ||||| |||||||||||||||| Sbjct: 509 aacaagagaacaatagcctgacaaa-----ggttcggtccgattcaggtgcc 463
>emb|AJ429732.1|PEL429732 Pentaphragma ellipticum chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1539 Score = 103 bits (52), Expect = 6e-19 Identities = 146/175 (83%), Gaps = 8/175 (4%) Strand = Plus / Minus Query: 212 tgaggataagggcctccaaaaaact-tcttttcgttctatgaactttaaggtgtatgaag 270 |||| |||||| |||| |||||| | ||||||||| |||||||||||||||||||||||| Sbjct: 365 tgagtataaggacctcaaaaaaaatctcttttcgtcctatgaactttaaggtgtatgaag 306 Query: 271 tctcatagttaactcttgcagtggaacgatagagactccatttcacttaggttgatttaa 330 | ||||| || | | ||| || ||||||||||| ||||| ||||||||| || Sbjct: 305 tttcatatttt--ttgttaagtagagcgatagagacttcatttaacttaggtt-----aa 253 Query: 331 tttagaccagaggcagacctaagtcaaggtaatcctcctttgaaacactttggta 385 ||||| ||||||||||||||| ||||| ||| |||||||||||||||||||||| Sbjct: 252 tttaggccagaggcagacctacgtcaatataaccctcctttgaaacactttggta 198 Score = 95.6 bits (48), Expect = 2e-16 Identities = 105/125 (84%), Gaps = 1/125 (0%) Strand = Plus / Minus Query: 459 aaaaactatggtggactaactgatctttaaatcagtttatgaaagagcccaatgcnnnnn 518 ||||| ||||| ||||| ||||| ||| ||||||| ||||||||||||||||| Sbjct: 138 aaaaaatatggcggactggctgatatttctatcagttaatgaaagagcccaatgcacaaa 79 Query: 519 nn-tgcatgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctg 577 ||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| Sbjct: 78 aaatgcatgttgggtctttgaaacagttcagatcattttgataataataagtttgatctg 19 Query: 578 tttta 582 ||||| Sbjct: 18 tttta 14 Score = 50.1 bits (25), Expect = 0.008 Identities = 70/85 (82%) Strand = Plus / Minus Query: 16 atgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcatagattcgagag 75 ||||||| || ||||| |||||| ||| ||||| |||||||||| |||| || ||| | Sbjct: 563 atgcaatcaaaataattgatctttttgagaaatcgatgtcttactccataactttgaggg 504 Query: 76 aataggagaacagtagcctgacaaa 100 || | ||||||| |||||||||||| Sbjct: 503 aacaagagaacaatagcctgacaaa 479
>emb|AJ429714.1|PCU429714 Polyosma cunninghamii chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1500 Score = 103 bits (52), Expect = 6e-19 Identities = 106/125 (84%), Gaps = 1/125 (0%) Strand = Plus / Minus Query: 459 aaaaactatggtggactaactgatctttaaatcagtttatgaaagagcccaatgcnnnnn 518 ||||| ||||| |||||| ||||| |||| ||||||| ||||||||||||||||| Sbjct: 138 aaaaaatatggcggactagctgatatttatatcagttaatgaaagagcccaatgcacaaa 79 Query: 519 nn-tgcatgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctg 577 |||| ||||||| |||||||||||||| ||||||| |||||||||| |||||||||| Sbjct: 78 aaatgcacgttgggtttttgaaacagttcagatcattttgataataatcagtttgatctg 19 Query: 578 tttta 582 ||||| Sbjct: 18 tttta 14 Score = 81.8 bits (41), Expect = 2e-12 Identities = 87/101 (86%), Gaps = 1/101 (0%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| |||| |||| | | | |||||||||| |||||| |||||| |||| || Sbjct: 402 ttgataaggtgaatacccagtctattcaatgctaggcaaaatgagtataaggacctcaaa 343 Query: 231 aaaacttcttttcgttctatgaactttaaggtgtatgaagt 271 ||| || |||||||| ||||||||||||||||||||||||| Sbjct: 342 aaatct-cttttcgtcctatgaactttaaggtgtatgaagt 303 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/89 (83%), Gaps = 7/89 (7%) Strand = Plus / Minus Query: 297 cgatagagactccatttcacttaggttgatttaatttagaccagaggcagacctaagtca 356 ||||||||||| ||||| ||||||||| ||| ||| ||||||||||||||| |||| Sbjct: 278 cgatagagacttcatttaacttaggtt-----aatctaggccagaggcagacctacgtca 224 Query: 357 aggtaatcctcctttgaaacactttggta 385 || ||| | || |||||||||||||||| Sbjct: 223 agataa--cccccttgaaacactttggta 197 Score = 50.1 bits (25), Expect = 0.008 Identities = 70/85 (82%) Strand = Plus / Minus Query: 16 atgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcatagattcgagag 75 ||||||| || | ||| |||||||||| ||||| |||||||||| |||| || ||| | Sbjct: 550 atgcaatcaaaagaattgatcttattgagaaatcgatgtcttactccataactttgaggg 491 Query: 76 aataggagaacagtagcctgacaaa 100 || | ||||||| |||||||||||| Sbjct: 490 aacaagagaacaatagcctgacaaa 466
>emb|AJ429711.1|ERU429711 Escallonia rubra chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1492 Score = 103 bits (52), Expect = 6e-19 Identities = 217/269 (80%), Gaps = 11/269 (4%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| |||| |||| | | | |||||||||| ||||||| |||||| |||| || Sbjct: 412 ttgataaggtgaatacccagtctattcaatgctaggcataatgagtataaggacctcaaa 353 Query: 231 aaaacttcttttcgttctatgaactttaaggtgtatgaagtctcatagttaactcttgca 290 |||| ||||||||| ||||||||||||||||||||||||| ||||| || | | || | Sbjct: 352 aaaatctcttttcgtcctatgaactttaaggtgtatgaagtttcatatttga-tttttaa 294 Query: 291 gtggaacgatagagactccatttcacttaggttgatttaatttagaccagaggcagacct 350 | || ||||||||||| |||| ||||||| ||||| ||| |||||||||||||| Sbjct: 293 gcagagcgatagagactttatttaacttagg-----ttaatctaggccagaggcagacct 239 Query: 351 aagtcaaggtaatcctcctttgaaacactttggtattgctcctagatagatcataataca 410 | |||||| ||| || || ||||| |||||||||| || ||| | ||||| ||| || Sbjct: 238 acgtcaagataa-ccccccttgaagcactttggtagtgttcc----tggatcagaatcca 184 Query: 411 aaaaatcaatcagagcacagggagccatc 439 || ||| | |||||||||| ||||||||| Sbjct: 183 aataatgactcagagcacacggagccatc 155 Score = 95.6 bits (48), Expect = 2e-16 Identities = 105/125 (84%), Gaps = 1/125 (0%) Strand = Plus / Minus Query: 459 aaaaactatggtggactaactgatctttaaatcagtttatgaaagagcccaatgcnnnnn 518 ||||| ||||| ||||| ||||| |||| ||||||| |||||||||||||||| Sbjct: 138 aaaaaatatggcggactggctgatatttatatcagttactgaaagagcccaatgcacaaa 79 Query: 519 nn-tgcatgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctg 577 ||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| Sbjct: 78 aaatgcatgttgggtctttgaaacagttcagatcattttgataataataagtttgatctg 19 Query: 578 tttta 582 ||||| Sbjct: 18 tttta 14 Score = 42.1 bits (21), Expect = 2.0 Identities = 69/85 (81%) Strand = Plus / Minus Query: 16 atgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcatagattcgagag 75 ||||||| || | ||| |||||||||| ||||| |||||||||| |||| || ||| Sbjct: 565 atgcaatcaaaagaattgatcttattgagaaatcgatgtcttactccataactttgagga 506 Query: 76 aataggagaacagtagcctgacaaa 100 || | ||||||| |||||||||||| Sbjct: 505 aacaagagaacaatagcctgacaaa 481
>emb|AJ429705.1|KMA429705 Kaliphora madagascariensis chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1530 Score = 103 bits (52), Expect = 6e-19 Identities = 239/296 (80%), Gaps = 17/296 (5%) Strand = Plus / Minus Query: 294 gaacgatagagactccatttcacttaggttgatttaatttagaccagaggcagacctaag 353 ||||||||||||| ||||| |||||||||||| || | ||| ||||||||||| | Sbjct: 299 gaacgatagagacctcatttaacttaggttgatcta-----ggccataggcagacctacg 245 Query: 354 tcaaggtaatcct-cctttgaaacactttggtattgctcctagatagatcataatacaaa 412 ||||| ||| || || |||||||||||||||| ||||||| || |||| ||| |||| Sbjct: 244 tcaagataaccccacccttgaaacactttggtaatgctcct-ga---atcagaatccaaa 189 Query: 413 a-aatcaatcagagcacagggagccatctcat----tatctttccgtaaagaaaaactat 467 | ||| |||||||||||| |||||||| || | ||| ||| || |||||||| ||| Sbjct: 188 ataatgaatcagagcacatggagccatttcctatcttatttttatgttaagaaaaa-tat 130 Query: 468 ggtggactaactgatctttaaatcagtttatgaaagagcccaatgcnnnnnnn-tgcatg 526 || ||||| ||||| ||| |||||| ||||||||||||||||| |||||| Sbjct: 129 ggcagactagctgatatttctttcagttaatgaaagagcccaatgcaaaaaaaatgcatg 70 Query: 527 ttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgtttta 582 ||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||| Sbjct: 69 ttgggtctttgaaacagttcagatcattttgataataatctgtttgatctgtttta 14 Score = 85.7 bits (43), Expect = 1e-13 Identities = 91/107 (85%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| |||| |||| | | | |||||||||| ||||||| |||||| |||| | Sbjct: 425 ttgataaggtgaatacccagtctattcaatgctaggcttaatgagtataaggacctcata 366 Query: 231 aaaacttcttttcgttctatgaactttaaggtgtatgaagtctcata 277 ||| ||||||||| ||||||||||||||||||||||||| ||||| Sbjct: 365 caaatctcttttcgtcctatgaactttaaggtgtatgaagtttcata 319
>emb|AJ429674.1|ASC429674 Alstonia scholaris chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1530 Score = 103 bits (52), Expect = 6e-19 Identities = 106/125 (84%), Gaps = 1/125 (0%) Strand = Plus / Minus Query: 459 aaaaactatggtggactaactgatctttaaatcagtttatgaaagagcccaatgcnnnnn 518 ||||| ||||| ||||||||||| ||| ||||||| ||||||||||||||||| Sbjct: 138 aaaaaatatggcagactaactgattttttgatcagttaatgaaagagcccaatgcaaaaa 79 Query: 519 nn-tgcatgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctg 577 ||||||||||||||||||||||||||| ||||||| |||||||| | |||||||||| Sbjct: 78 aaatgcatgttgggtctttgaaacagttcagatcattttgataataaacagtttgatctg 19 Query: 578 tttta 582 ||||| Sbjct: 18 tttta 14 Score = 93.7 bits (47), Expect = 6e-16 Identities = 183/223 (82%), Gaps = 9/223 (4%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| ||||||||| | | | |||||||||| ||||||| |||| |||| || Sbjct: 425 ttgataaggtgaatatccagtctattcaatgctaggcataatgagtccaaggacctcaaa 366 Query: 231 aaaacttcttttcgttctatgaactttaaggtgtatgaagtctcatagttaactcttgca 290 ||| || |||||| | ||||||||||||||||||||||||| ||||| || | | ||| | Sbjct: 365 aaatct-cttttcatcctatgaactttaaggtgtatgaagtttcatatttca-ttttgta 308 Query: 291 gt-ggaacgatagagactccatttcacttaggttgatttaatttagaccagaggcagacc 349 | |||||||||||||| ||||| |||||||||| || ||| ||||||||||||| Sbjct: 307 atcagaacgatagagacttcatttaacttaggttg-----atctaggccagaggcagacc 253 Query: 350 taagtcaaggtaatcct-cctttgaaacactttggtattgctc 391 || |||||| ||| ||| || |||||| ||||||||| ||||| Sbjct: 252 tacgtcaagataaccctacccttgaaagactttggtagtgctc 210
>emb|AJ429663.1|TAM429663 Theophrasta americana chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1478 Score = 103 bits (52), Expect = 6e-19 Identities = 85/96 (88%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 ||||||||||||||| |||| | | | |||||||||| ||||||| |||||| |||| || Sbjct: 424 ttgataaggtaaatacccagtctattcaatgctaggcataatgagtataaggacctcaaa 365 Query: 231 aaaacttcttttcgttctatgaactttaaggtgtat 266 | || ||||||||||||||||||||||||||||||| Sbjct: 364 acaatttcttttcgttctatgaactttaaggtgtat 329 Score = 87.7 bits (44), Expect = 4e-14 Identities = 83/96 (86%) Strand = Plus / Minus Query: 418 aatcagagcacagggagccatctcattatctttccgtaaagaaaaactatggtggactaa 477 ||||||||||| |||||||||||| |||| |||| || |||||||| ||||| ||| | Sbjct: 186 aatcagagcacggggagccatctctttatttttctgtcaagaaaaaatatggcagaccag 127 Query: 478 ctgatctttaaatcagtttatgaaagagcccaatgc 513 ||||| |||| ||||||| ||||||||||||||||| Sbjct: 126 ctgatatttatatcagttaatgaaagagcccaatgc 91 Score = 79.8 bits (40), Expect = 9e-12 Identities = 56/62 (90%) Strand = Plus / Minus Query: 521 tgcatgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgttt 580 |||||||||||||||||||||||||| ||||||| ||||||||| ||| ||||||||| Sbjct: 75 tgcatgttgggtctttgaaacagttcggatcattttgataataataagttkgatctgttt 16 Query: 581 ta 582 || Sbjct: 15 ta 14 Score = 40.1 bits (20), Expect = 7.9 Identities = 56/68 (82%) Strand = Plus / Minus Query: 33 gatcttattgcaaaatcaatgtcttacttcatagattcgagagaataggagaacagtagc 92 |||||||| | |||||| |||||||||| |||| || ||| ||| | ||||| | |||| Sbjct: 560 gatcttatggaaaaatcgatgtcttactccataactttgagggaacaagagaaaaatagc 501 Query: 93 ctgacaaa 100 |||||||| Sbjct: 500 ctgacaaa 493
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 101 bits (51), Expect = 3e-18 Identities = 75/82 (91%), Gaps = 2/82 (2%) Strand = Plus / Plus Query: 10 cttattatgcaatgaacataatcgatct--tattgcaaaatcaatgtcttacttcataga 67 |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| || Sbjct: 726687 cttattatgcaatgaacataatggatctcttattgcaaaatcaatgtcttacttcatgga 726746 Query: 68 ttcgagagaataggagaacagt 89 | ||||||||||| ||||||| Sbjct: 726747 tatgagagaataggtgaacagt 726768
>dbj|AP003874.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1118_G09 Length = 115815 Score = 101 bits (51), Expect = 3e-18 Identities = 75/82 (91%), Gaps = 2/82 (2%) Strand = Plus / Plus Query: 10 cttattatgcaatgaacataatcgatct--tattgcaaaatcaatgtcttacttcataga 67 |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| || Sbjct: 65218 cttattatgcaatgaacataatggatctcttattgcaaaatcaatgtcttacttcatgga 65277 Query: 68 ttcgagagaataggagaacagt 89 | ||||||||||| ||||||| Sbjct: 65278 tatgagagaataggtgaacagt 65299
>dbj|AP005244.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1513_F02 Length = 126845 Score = 101 bits (51), Expect = 3e-18 Identities = 75/82 (91%), Gaps = 2/82 (2%) Strand = Plus / Plus Query: 10 cttattatgcaatgaacataatcgatct--tattgcaaaatcaatgtcttacttcataga 67 |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| || Sbjct: 46494 cttattatgcaatgaacataatggatctcttattgcaaaatcaatgtcttacttcatgga 46553 Query: 68 ttcgagagaataggagaacagt 89 | ||||||||||| ||||||| Sbjct: 46554 tatgagagaataggtgaacagt 46575
>emb|AJ429686.1|PSP429686 Pinguicula sp. Erixon and Bremer 54 chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1502 Score = 101 bits (51), Expect = 3e-18 Identities = 95/107 (88%), Gaps = 2/107 (1%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| |||| |||| |||| |||||||||| ||||||| |||||| |||| || Sbjct: 426 ttgataaggtgaata-ccagtacactcaatgctaggcataatgagtataaggtcctc-aa 369 Query: 231 aaaacttcttttcgttctatgaactttaaggtgtatgaagtctcata 277 ||||| |||||||||||||||||||||||||||||| |||| ||||| Sbjct: 368 aaaacctcttttcgttctatgaactttaaggtgtattaagtttcata 322 Score = 97.6 bits (49), Expect = 4e-17 Identities = 202/251 (80%), Gaps = 12/251 (4%) Strand = Plus / Minus Query: 340 gaggcagacctaagtcaaggtaatcct-cctttgaaacactttggtattgctcctagata 398 |||||||||||| |||||| ||| || ||||||||||||||||||| ||||||| ||| Sbjct: 260 gaggcagacctacgtcaagataaccccacctttgaaacactttggtaatgctcctggat- 202 Query: 399 gatcataatacaaaa-aatcaatcagagcacagggagccatctcattatctt-----tcc 452 || ||| | ||| ||| |||||||||||| ||| ||||||| ||||||| || Sbjct: 201 ---cagaatcccaaataatgaatcagagcacatggaaccatctccttatcttatttttct 145 Query: 453 gtaaagaaaaactatggtggactaactgatctttaaatcagtttatgaaagagcccaatg 512 || |||||||| ||||||| | | ||||| ||| ||||||| |||||||||||||||| Sbjct: 144 gtcaagaaaaagtatggtgaattggctgatatttctatcagttaatgaaagagcccaatg 85 Query: 513 cnnnnnnn-tgcatgttgggtctttgaaacagttcaaatcatttcgataataatccgttt 571 | ||| |||||||||||||||||||||| ||||||| ||||||||| |||| Sbjct: 84 caaaaaaaatgcgtgttgggtctttgaaacagttccgatcattttgataataataagttt 25 Query: 572 gatctgtttta 582 ||||||||||| Sbjct: 24 gatctgtttta 14
>emb|AJ429528.1|TSP429528 Tetramerista sp. Coode 7925 chloroplast atpE gene (partial), tRNA-Met gene and tRNA-Val gene Length = 1503 Score = 101 bits (51), Expect = 3e-18 Identities = 123/148 (83%), Gaps = 1/148 (0%) Strand = Plus / Minus Query: 418 aatcagagcacagggagccatctcattatctttccgtaaagaaaaactatggtggactaa 477 |||| |||||| ||||||||||| |||| |||| || |||||||| ||||| ||||||| Sbjct: 155 aatccgagcacgtggagccatctccttatttttctgtcaagaaaaaatatggcggactaa 96 Query: 478 ctgatctttaaatcagtttatgaaagagcccaatgc-nnnnnnntgcatgttgggtcttt 536 ||||| ||| ||||||| ||||||||||||||||| ||||||||||||||| Sbjct: 95 ctgatatttctatcagttaatgaaagagcccaatgcaaaaaaaaggcatgttgggtcttt 36 Query: 537 gaaacagttcaaatcatttcgataataa 564 |||||||||| ||||||| |||||||| Sbjct: 35 gaaacagttcggatcattttgataataa 8 Score = 56.0 bits (28), Expect = 1e-04 Identities = 59/68 (86%), Gaps = 1/68 (1%) Strand = Plus / Minus Query: 327 ttaatttagaccagaggcagacctaagtcaaggt-aatcctcctttgaaacactttggta 385 ||||| ||| ||||||||||||||| |||||| | ||||| | ||||||| ||||||||| Sbjct: 238 ttaatctaggccagaggcagacctacgtcaagataaatccccttttgaaaaactttggta 179 Query: 386 ttgctcct 393 ||||||| Sbjct: 178 gtgctcct 171
>dbj|AP002983.1| Lotus japonicus chloroplast DNA, complete genome Length = 150519 Score = 99.6 bits (50), Expect = 1e-17 Identities = 138/167 (82%), Gaps = 2/167 (1%) Strand = Plus / Plus Query: 418 aatcagagcacagggagccatctcattat-ctttccgtaaagaaaaactatggtggacta 476 ||||||||||||||||| |||||| |||| ||||| || |||||||| ||| | ||||| Sbjct: 10127 aatcagagcacagggagtcatctctttattctttctgtcaagaaaaaggatgatagacta 10186 Query: 477 actgatctttaaatcagtttatgaaagagcccaatgcnnnnnnn-tgcatgttgggtctt 535 || ||| ||| ||||||| |||||| |||||||||| ||||||||||||||| Sbjct: 10187 acagatatttctatcagttaatgaaaaagcccaatgcaaaaaacatgcatgttgggtctt 10246 Query: 536 tgaaacagttcaaatcatttcgataataatccgtttgatctgtttta 582 ||||| |||||||||||| ||||||||| ||||||||||||||| Sbjct: 10247 aaaaacaattcaaatcattttgataataataagtttgatctgtttta 10293 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 248 tatgaactttaaggtgtatgaagtctcat 276 |||||||||||||||||||||||| |||| Sbjct: 9937 tatgaactttaaggtgtatgaagtttcat 9965
>emb|AJ429657.1|SOF429657 Styrax officinale chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1515 Score = 99.6 bits (50), Expect = 1e-17 Identities = 143/175 (81%), Gaps = 1/175 (0%) Strand = Plus / Minus Query: 409 caaaaaatcaatcagagcacagggagccatctcattatctttccgtaaagaaaaactatg 468 |||| ||| ||||||||||| |||||||||||| |||| |||| || |||||||| |||| Sbjct: 188 caaataatgaatcagagcacggggagccatctccttatttttctgtcaagaaaaaatatg 129 Query: 469 gtggactaactgatctttaaatcagtttatgaaagagcccaatgc-nnnnnnntgcatgt 527 | ||||| | || |||| ||| ||| ||||||||||||||||| ||||||| Sbjct: 128 gcggactggcgaatatttatatccgttaatgaaagagcccaatgcaaaaaaaatgcatgt 69 Query: 528 tgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgtttta 582 |||||||| |||||||||| ||||||| ||||| ||| ||||||||||||||| Sbjct: 68 tgggtcttcgaaacagttcggatcattttgataaaaataagtttgatctgtttta 14 Score = 69.9 bits (35), Expect = 9e-09 Identities = 89/107 (83%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| |||| |||| | | | |||| ||||| ||||||| ||||| |||| || Sbjct: 421 ttgataaggtgaatacccagtctattcaatgttaggcctaatgagtataagaacctcaaa 362 Query: 231 aaaacttcttttcgttctatgaactttaaggtgtatgaagtctcata 277 |||| ||||||||| |||||||| ||||||||||| |||| ||||| Sbjct: 361 aaaatctcttttcgtcctatgaaccttaaggtgtataaagtttcata 315 Score = 50.1 bits (25), Expect = 0.008 Identities = 70/85 (82%) Strand = Plus / Minus Query: 16 atgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcatagattcgagag 75 ||||||| || | ||| |||||||||| |||||| |||||||||| ||| || ||| | Sbjct: 574 atgcaatcaaaagaattgatcttattgaaaaatcgatgtcttactctataactttgaggg 515 Query: 76 aataggagaacagtagcctgacaaa 100 || | ||||||| |||||||||||| Sbjct: 514 aacaagagaacaatagcctgacaaa 490
>gb|DQ365820.1| Leucophyllum laevigatum tRNA-Val gene, partial sequence; tRNA-Met gene, complete sequence; and AtpE (atpE) gene, partial cds; chloroplast Length = 1504 Score = 97.6 bits (49), Expect = 4e-17 Identities = 108/129 (83%), Gaps = 2/129 (1%) Strand = Plus / Minus Query: 456 aagaaaaactatggtggactaactgatctttaaatcagtttatgaaagagcccaatgcnn 515 |||||||| ||||||||| || ||||| ||| ||||||| ||||||||||||||||| Sbjct: 136 aagaaaaaatatggtggattagctgatatttctatcagttaatgaaagagcccaatgcaa 77 Query: 516 nnnnn--tgcatgttgggtctttgaaacagttcaaatcatttcgataataatccgtttga 573 ||||||||||||||||||||||||||| ||||||| |||||||| |||||| Sbjct: 76 aaaaaaatgcatgttgggtctttgaaacagttcagatcattttgataataaaaagtttga 17 Query: 574 tctgtttta 582 ||||||||| Sbjct: 16 tctgtttta 8 Score = 87.7 bits (44), Expect = 4e-14 Identities = 72/80 (90%), Gaps = 1/80 (1%) Strand = Plus / Minus Query: 198 aatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaacttt 257 |||||||||| ||||||| |||||| |||| ||||| || |||||||| ||||||||||| Sbjct: 392 aatgctaggcataatgagtataaggtcctcaaaaaatct-cttttcgtcctatgaacttt 334 Query: 258 aaggtgtatgaagtctcata 277 |||||||||||||| ||||| Sbjct: 333 aaggtgtatgaagtttcata 314 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/59 (88%), Gaps = 2/59 (3%) Strand = Plus / Minus Query: 337 ccagaggcagacctaagtcaaggtaatcct--cctttgaaacactttggtattgctcct 393 ||||||||||||||| |||||| ||| || ||||||||||||||||||| ||||||| Sbjct: 259 ccagaggcagacctacgtcaagataaccccaccctttgaaacactttggtaatgctcct 201
>gb|DQ365816.1| Leucophyllum frutescens tRNA-Val gene, partial sequence; tRNA-Met gene, complete sequence; and AtpE (atpE) gene, partial cds; chloroplast Length = 1519 Score = 97.6 bits (49), Expect = 4e-17 Identities = 108/129 (83%), Gaps = 2/129 (1%) Strand = Plus / Minus Query: 456 aagaaaaactatggtggactaactgatctttaaatcagtttatgaaagagcccaatgcnn 515 |||||||| ||||||||| || ||||| ||| ||||||| ||||||||||||||||| Sbjct: 153 aagaaaaaatatggtggattagctgatatttctatcagttaatgaaagagcccaatgcaa 94 Query: 516 nnnnn--tgcatgttgggtctttgaaacagttcaaatcatttcgataataatccgtttga 573 ||||||||||||||||||||||||||| ||||||| |||||||| |||||| Sbjct: 93 aaaaaaatgcatgttgggtctttgaaacagttcagatcattttgataataaaaagtttga 34 Query: 574 tctgtttta 582 ||||||||| Sbjct: 33 tctgtttta 25 Score = 87.7 bits (44), Expect = 4e-14 Identities = 72/80 (90%), Gaps = 1/80 (1%) Strand = Plus / Minus Query: 198 aatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaacttt 257 |||||||||| ||||||| |||||| |||| ||||| || |||||||| ||||||||||| Sbjct: 409 aatgctaggcataatgagtataaggtcctcaaaaaatct-cttttcgtcctatgaacttt 351 Query: 258 aaggtgtatgaagtctcata 277 |||||||||||||| ||||| Sbjct: 350 aaggtgtatgaagtttcata 331 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/59 (88%), Gaps = 2/59 (3%) Strand = Plus / Minus Query: 337 ccagaggcagacctaagtcaaggtaatcct--cctttgaaacactttggtattgctcct 393 ||||||||||||||| |||||| ||| || ||||||||||||||||||| ||||||| Sbjct: 276 ccagaggcagacctacgtcaagataaccccaccctttgaaacactttggtaatgctcct 218
>emb|AJ429703.1|HOV429703 Hydrolea ovata chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1490 Score = 97.6 bits (49), Expect = 4e-17 Identities = 89/101 (88%), Gaps = 1/101 (0%) Strand = Plus / Minus Query: 170 gttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctcca 229 ||||||||||| |||| |||| | | | |||||||||| ||||||| ||||||||||| | Sbjct: 423 gttgataaggtgaatacccagtctattcaatgctaggcataatgagtataagggcctcaa 364 Query: 230 aaaaacttcttttcgttctatgaactttaaggtgtatgaag 270 |||| || |||||||| |||||||||||||||||||||||| Sbjct: 363 aaaatct-cttttcgtcctatgaactttaaggtgtatgaag 324 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Minus Query: 521 tgcatgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgttt 580 ||||||||||||||||||||||||||| ||||||| || || ||| ||||||||||||| Sbjct: 68 tgcatgttgggtctttgaaacagttcagatcattttgagaaaaataagtttgatctgttt 9 Query: 581 ta 582 || Sbjct: 8 ta 7
>gb|DQ365819.1| Leucophyllum candidum tRNA-Val gene, partial sequence; tRNA-Met gene, complete sequence; and AtpE (atpE) gene, partial cds; chloroplast Length = 1530 Score = 95.6 bits (48), Expect = 2e-16 Identities = 206/256 (80%), Gaps = 15/256 (5%) Strand = Plus / Minus Query: 337 ccagaggcagacctaagtcaaggtaatcct--cctttgaaacactttggtattgctccta 394 ||||||||||||||| |||||| ||| || ||||||||||||||||||| ||||||| Sbjct: 270 ccagaggcagacctacgtcaagataaccccaccctttgaaacactttggtaatgctcctg 211 Query: 395 gatagatcataatacaaaa-aatcaatcagagcacagggagccatctcattatctt---- 449 ||| || ||| | || ||| |||||||||||| ||| ||||||| ||||||| Sbjct: 210 gat----cagaatccccaataatgaatcagagcacatggaaccatctccttatcttattt 155 Query: 450 -tccgtaaagaaaaactatggtggactaactgatctttaaatcagtttatgaaagagccc 508 | || |||||||| ||||||||| || ||||| ||| ||||||| |||||||||||| Sbjct: 154 ttatgtcaagaaaaa-tatggtggattagctgatatttctatcagttaatgaaagagccc 96 Query: 509 aatgcnnnnnnn--tgcatgttgggtctttgaaacagttcaaatcatttcgataataatc 566 ||||| ||||||||||||||||||||||||||| ||||||| |||||||| Sbjct: 95 aatgcaaaaaaaaatgcatgttgggtctttgaaacagttcagatcattttgataataaaa 36 Query: 567 cgtttgatctgtttta 582 ||||||||||||||| Sbjct: 35 agtttgatctgtttta 20 Score = 87.7 bits (44), Expect = 4e-14 Identities = 72/80 (90%), Gaps = 1/80 (1%) Strand = Plus / Minus Query: 198 aatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaacttt 257 |||||||||| ||||||| |||||| |||| ||||| || |||||||| ||||||||||| Sbjct: 403 aatgctaggcataatgagtataaggtcctcaaaaaatct-cttttcgtcctatgaacttt 345 Query: 258 aaggtgtatgaagtctcata 277 |||||||||||||| ||||| Sbjct: 344 aaggtgtatgaagtttcata 325
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 95.6 bits (48), Expect = 2e-16 Identities = 95/112 (84%), Gaps = 2/112 (1%) Strand = Plus / Minus Query: 456 aagaaaaactatggtggactaactgatctttaaatcagtttatgaaagagcccaatgc-- 513 |||||||| |||||| ||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 50247 aagaaaaaatatggtagactaactgatctttctatcagttaatgaaagagcccaatgcaa 50188 Query: 514 nnnnnnntgcatgttgggtctttgaaacagttcaaatcatttcgataataat 565 |||||||||||||||||||| ||||| |||||||| ||||||||| Sbjct: 50187 aaaaaaatgcatgttgggtctttgaaagagttcgaatcattttgataataat 50136 Score = 42.1 bits (21), Expect = 2.0 Identities = 45/53 (84%) Strand = Plus / Minus Query: 333 tagaccagaggcagacctaagtcaaggtaatcctcctttgaaacactttggta 385 ||||||| | ||| ||||| |||||| || ||| |||||||||||||||||| Sbjct: 50382 tagaccaaaagcaaacctacgtcaagagaacccttctttgaaacactttggta 50330
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 95.6 bits (48), Expect = 2e-16 Identities = 95/112 (84%), Gaps = 2/112 (1%) Strand = Plus / Minus Query: 456 aagaaaaactatggtggactaactgatctttaaatcagtttatgaaagagcccaatgc-- 513 |||||||| |||||| ||||||||||||||| ||||||| ||||||||||||||||| Sbjct: 51363 aagaaaaaatatggtagactaactgatctttcgatcagttaatgaaagagcccaatgcaa 51304 Query: 514 nnnnnnntgcatgttgggtctttgaaacagttcaaatcatttcgataataat 565 |||||||||||||||||||| ||||| |||||||| ||||||||| Sbjct: 51303 aaaaaaatgcatgttgggtctttgaaagagttcgaatcattttgataataat 51252 Score = 48.1 bits (24), Expect = 0.032 Identities = 36/40 (90%) Strand = Plus / Minus Query: 237 tcttttcgttctatgaactttaaggtgtatgaagtctcat 276 ||||||||| |||||||| ||||||||||| |||| |||| Sbjct: 51579 tcttttcgtcctatgaaccttaaggtgtatcaagtttcat 51540 Score = 42.1 bits (21), Expect = 2.0 Identities = 45/53 (84%) Strand = Plus / Minus Query: 333 tagaccagaggcagacctaagtcaaggtaatcctcctttgaaacactttggta 385 ||||||| | ||| ||||| |||||| || ||| |||||||||||||||||| Sbjct: 51488 tagaccaaaagcaaacctacgtcaagagaacccttctttgaaacactttggta 51436
>emb|AJ429734.1|RSI429734 Roussea simplex chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1455 Score = 95.6 bits (48), Expect = 2e-16 Identities = 105/125 (84%), Gaps = 1/125 (0%) Strand = Plus / Minus Query: 459 aaaaactatggtggactaactgatctttaaatcagtttatgaaagagcccaatgcnnnnn 518 ||||| ||||| |||| |||||| |||| ||||||| ||||||||||||||||| Sbjct: 138 aaaaaatatggcagactgactgatatttagatcagttaatgaaagagcccaatgcacaaa 79 Query: 519 nn-tgcatgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctg 577 ||||||||||||||||||||||||||| ||||||| |||||||| |||||||||| Sbjct: 78 aaatgcatgttgggtctttgaaacagttcagatcattttgataataaaaagtttgatctg 19 Query: 578 tttta 582 ||||| Sbjct: 18 tttta 14 Score = 93.7 bits (47), Expect = 6e-16 Identities = 174/215 (80%), Gaps = 6/215 (2%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| |||| |||| | | | |||||||||| |||||| |||||| |||| || Sbjct: 412 ttgataaggtgaatacccagtctattcaatgctaggcagaatgagtataaggacctcaaa 353 Query: 231 aaaacttcttttcgttctatgaactttaaggtgtatgaagtctcatagttaactcttgca 290 |||| ||||||||| ||||||||||| ||||||||||||| ||||| || | | || | Sbjct: 352 aaaatctcttttcgtcctatgaacttttaggtgtatgaagtttcatatttta-tttttaa 294 Query: 291 gtggaacgatagagactccatttcacttaggttgatttaatttagaccagaggcagacct 350 | || ||||||||||| ||||| ||||||| ||||| ||| | |||||||||||| Sbjct: 293 gcagagcgatagagacttcatttaacttagg-----ttaatctaggctagaggcagacct 239 Query: 351 aagtcaaggtaatcctcctttgaaacactttggta 385 | |||||| ||| || | |||||||||||||||| Sbjct: 238 acgtcaagataaccccctcttgaaacactttggta 204
>emb|AJ429730.1|SSP429730 Scaevola sp. Lundberg 55 chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1485 Score = 95.6 bits (48), Expect = 2e-16 Identities = 72/80 (90%) Strand = Plus / Minus Query: 198 aatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaacttt 257 |||||||||| ||||||| |||||| |||| ||||| | |||||||| ||||||||||| Sbjct: 386 aatgctaggcataatgagtataaggacctcaaaaaatttgcttttcgtgctatgaacttt 327 Query: 258 aaggtgtatgaagtctcata 277 |||||||||||||||||||| Sbjct: 326 aaggtgtatgaagtctcata 307 Score = 71.9 bits (36), Expect = 2e-09 Identities = 55/62 (88%) Strand = Plus / Minus Query: 521 tgcatgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgttt 580 ||||||||||||||||||||||||||| ||||||| |||| | || |||||||||| || Sbjct: 75 tgcatgttgggtctttgaaacagttcagatcattttgatacttataagtttgatctgktt 16 Query: 581 ta 582 || Sbjct: 15 ta 14
>emb|AJ429699.1|STH429699 Selago thomsoni chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1518 Score = 95.6 bits (48), Expect = 2e-16 Identities = 73/80 (91%), Gaps = 1/80 (1%) Strand = Plus / Minus Query: 198 aatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaacttt 257 |||||||||| ||||||| |||||| |||| ||||||| ||||||||| ||||||||||| Sbjct: 400 aatgctaggcataatgagtataaggtcctc-aaaaaacctcttttcgtcctatgaacttt 342 Query: 258 aaggtgtatgaagtctcata 277 |||||||||||||| ||||| Sbjct: 341 aaggtgtatgaagtttcata 322 Score = 83.8 bits (42), Expect = 6e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 521 tgcatgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgttt 580 ||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||| Sbjct: 75 tgcatgttgggtctttgaaacagttcacatcattttgataataaaaagtttgatctgttt 16 Query: 581 ta 582 || Sbjct: 15 ta 14 Score = 60.0 bits (30), Expect = 9e-06 Identities = 93/111 (83%), Gaps = 6/111 (5%) Strand = Plus / Minus Query: 341 aggcagacctaagtcaaggtaatcct-cctttgaaacactttggtattgctcctagatag 399 ||||||||||| |||||| |||||| || |||||||||||||||| |||||| | | Sbjct: 263 aggcagacctacgtcaagataatcccacccttgaaacactttggtagtgctcc----tgg 208 Query: 400 atcataat-acaaaaaatcaatcagagcacagggagccatctcattatctt 449 |||| ||| |||| ||| |||||||||||| ||||||||||| ||||||| Sbjct: 207 atcagaatctcaaataatgaatcagagcacatggagccatctccttatctt 157
>emb|AJ429685.1|LAL429685 Lamium album chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1507 Score = 95.6 bits (48), Expect = 2e-16 Identities = 117/141 (82%), Gaps = 1/141 (0%) Strand = Plus / Minus Query: 443 ttatctttccgtaaagaaaaactatggtggactaactgatctttaaatcagtttatgaaa 502 |||| |||| || |||||||| ||||| ||| | ||||| ||| ||||||| |||||| Sbjct: 154 ttatttttctgtcaagaaaaaatatggcggattggctgatatttctatcagttaatgaaa 95 Query: 503 gagcccaatgcnnnnnnn-tgcatgttgggtctttgaaacagttcaaatcatttcgataa 561 ||||||||||| ||||||||||||||||||||||||||| ||||||| ||||| Sbjct: 94 gagcccaatgcaaaaaaagtgcatgttgggtctttgaaacagttcagatcattttgataa 35 Query: 562 taatccgtttgatctgtttta 582 |||| ||||||||||||||| Sbjct: 34 taataagtttgatctgtttta 14 Score = 71.9 bits (36), Expect = 2e-09 Identities = 70/80 (87%), Gaps = 1/80 (1%) Strand = Plus / Minus Query: 198 aatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaacttt 257 |||||||||| ||||||| | |||| |||| ||||| || |||||||| |||||||||| Sbjct: 396 aatgctaggcataatgagtacaaggccctcaaaaaatct-cttttcgtcctatgaacttg 338 Query: 258 aaggtgtatgaagtctcata 277 |||||||||||||| ||||| Sbjct: 337 aaggtgtatgaagtttcata 318
>gb|DQ365817.1| Leucophyllum pringlei tRNA-Val gene, partial sequence; tRNA-Met gene, complete sequence; and AtpE (atpE) gene, partial cds; chloroplast Length = 1511 Score = 93.7 bits (47), Expect = 6e-16 Identities = 104/124 (83%), Gaps = 1/124 (0%) Strand = Plus / Minus Query: 460 aaaactatggtggactaactgatctttaaatcagtttatgaaagagcccaatgcnnnnnn 519 |||| ||||||||| || ||||| ||| ||||||| ||||||||||||||||| Sbjct: 143 aaaaatatggtggattagctgatatttctatcagttaatgaaagagcccaatgcaaaaaa 84 Query: 520 n-tgcatgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgt 578 ||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||| Sbjct: 83 aatgcatgttgggtctttgaaacagttcagatcattttgataataaaaagtttgatctgt 24 Query: 579 ttta 582 |||| Sbjct: 23 ttta 20 Score = 87.7 bits (44), Expect = 4e-14 Identities = 72/80 (90%), Gaps = 1/80 (1%) Strand = Plus / Minus Query: 198 aatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaacttt 257 |||||||||| ||||||| |||||| |||| ||||| || |||||||| ||||||||||| Sbjct: 402 aatgctaggcataatgagtataaggtcctcaaaaaatct-cttttcgtcctatgaacttt 344 Query: 258 aaggtgtatgaagtctcata 277 |||||||||||||| ||||| Sbjct: 343 aaggtgtatgaagtttcata 324 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/59 (88%), Gaps = 2/59 (3%) Strand = Plus / Minus Query: 337 ccagaggcagacctaagtcaaggtaatcct--cctttgaaacactttggtattgctcct 393 ||||||||||||||| |||||| ||| || ||||||||||||||||||| ||||||| Sbjct: 269 ccagaggcagacctacgtcaagataaccccaccctttgaaacactttggtaatgctcct 211
>emb|AJ430388.1|PFR430388 Proboscidea fragrans chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1494 Score = 93.7 bits (47), Expect = 6e-16 Identities = 152/184 (82%), Gaps = 11/184 (5%) Strand = Plus / Minus Query: 337 ccagaggcagacctaagtcaaggtaatcct-cctttgaaacactttggtattgctcctag 395 ||||||||||||||| |||||| ||| || ||||||||||||||||||| ||||||| | Sbjct: 266 ccagaggcagacctacgtcaagataaccccacctttgaaacactttggtagtgctcctgg 207 Query: 396 atagatcataatacaaaa-aatcaatcagagcacagggagccatctcattatctt----- 449 || || ||| | ||| ||| |||||||||||| ||||||||||| ||||||| Sbjct: 206 at----cagaatcccaaataatgaatcagagcacatggagccatctccttatcttatttt 151 Query: 450 tccgtaaagaaaaactatggtggactaactgatctttaaatcagtttatgaaagagccca 509 || || |||||||| ||||||||| | |||||| ||| ||||||| ||||||||||||| Sbjct: 150 tctgtcaagaaaaaatatggtggattgactgatatttctatcagttaatgaaagagccca 91 Query: 510 atgc 513 |||| Sbjct: 90 atgc 87 Score = 91.7 bits (46), Expect = 2e-15 Identities = 58/62 (93%) Strand = Plus / Minus Query: 521 tgcatgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgttt 580 ||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||| Sbjct: 75 tgcatgttgggtctttgaaacagttcagatcatttggataataataagtttgatctgttt 16 Query: 581 ta 582 || Sbjct: 15 ta 14 Score = 87.7 bits (44), Expect = 4e-14 Identities = 72/80 (90%), Gaps = 1/80 (1%) Strand = Plus / Minus Query: 198 aatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaacttt 257 |||||||||| ||||||| |||||| |||| ||||| || |||||||| ||||||||||| Sbjct: 399 aatgctaggcataatgagtataaggtcctcaaaaaatct-cttttcgtcctatgaacttt 341 Query: 258 aaggtgtatgaagtctcata 277 |||||||||||||| ||||| Sbjct: 340 aaggtgtatgaagtttcata 321
>emb|AJ429690.1|PTO429690 Paulownia tomentosa chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1492 Score = 91.7 bits (46), Expect = 2e-15 Identities = 104/122 (85%), Gaps = 1/122 (0%) Strand = Plus / Minus Query: 198 aatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaacttt 257 |||||||||| ||||||| |||||| |||| ||||| || |||||||| ||||||||||| Sbjct: 399 aatgctaggcataatgagtataaggtcctcaaaaaatct-cttttcgtcctatgaacttt 341 Query: 258 aaggtgtatgaagtctcatagttaactcttgcagtggaacgatagagactccatttcact 317 |||||||||||||| ||||| || | | || || |||||||||||||| ||||| ||| Sbjct: 340 aaggtgtatgaagtttcatatttgattttttaagccgaacgatagagacttcatttaact 281 Query: 318 ta 319 || Sbjct: 280 ta 279 Score = 91.7 bits (46), Expect = 2e-15 Identities = 58/62 (93%) Strand = Plus / Minus Query: 521 tgcatgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgttt 580 ||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||| Sbjct: 75 tgcatgttgggtctttgaaacagttcagatcattttgataataataagtttgatctgttt 16 Query: 581 ta 582 || Sbjct: 15 ta 14 Score = 69.9 bits (35), Expect = 9e-09 Identities = 146/180 (81%), Gaps = 11/180 (6%) Strand = Plus / Minus Query: 341 aggcagacctaagtcaaggtaatcct-cctttgaaacactttggtattgctcctagatag 399 ||||||||||| |||||| ||| || ||||||||||||||||||| ||||||| ||| Sbjct: 262 aggcagacctacgtcaagataaccccacctttgaaacactttggtagtgctcctggat-- 205 Query: 400 atcataatacaaaa-aatcaatcagagcacagggagccatctcattatctt-----tccg 453 || ||| | ||| ||| |||||||||||| ||||||||||| ||||||| || | Sbjct: 204 --cagaatcccaaataatgaatcagagcacatggagccatctccttatcttatttttctg 147 Query: 454 taaagaaaaactatggtggactaactgatctttaaatcagtttatgaaagagcccaatgc 513 | |||||||| ||||| ||| | ||||| ||| ||||||| ||||||||||||||||| Sbjct: 146 tcaagaaaaaatatggcggattggctgatatttctatcagttaatgaaagagcccaatgc 87
>emb|AJ429677.1|LVA429677 Logania vaginalis chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1537 Score = 91.7 bits (46), Expect = 2e-15 Identities = 179/222 (80%), Gaps = 6/222 (2%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| ||||||||| | | | ||||||||| ||||||| ||||| |||| || Sbjct: 425 ttgataaggtgaatatccagtctattcaatgctaggtataatgagtctaaggacctcaaa 366 Query: 231 aaaacttcttttcgttctatgaactttaaggtgtatgaagtctcatagttaactcttgca 290 | || ||||||| | ||||||||||||||||||||||||| ||||| || | | || | Sbjct: 365 acaatctcttttcatcctatgaactttaaggtgtatgaagtttcatatttcattttttaa 306 Query: 291 gtggaacgatagagactccatttcacttaggttgatttaatttagaccagaggcagacct 350 |||||||||||||| ||||| |||||||||| || ||| ||||||||| |||| Sbjct: 305 tcagaacgatagagacttcatttaacttaggttg-----atctaggccagaggcaaacct 251 Query: 351 aagtcaaggtaatcct-cctttgaaacactttggtattgctc 391 | |||||| ||| ||| || |||||| ||||||||| ||||| Sbjct: 250 acgtcaagataaccctacccttgaaagactttggtagtgctc 209 Score = 83.8 bits (42), Expect = 6e-13 Identities = 81/95 (85%), Gaps = 1/95 (1%) Strand = Plus / Minus Query: 489 atcagtttatgaaagagcccaatgc-nnnnnnntgcatgttgggtctttgaaacagttca 547 ||||||| ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 108 atcagttaatgaaagagcccaatgcaaaaaaaatgcatgttgggtctttgaaacagttca 49 Query: 548 aatcatttcgataataatccgtttgatctgtttta 582 ||||||| |||||||| ||||||||||||||| Sbjct: 48 gatcatttggataataaagagtttgatctgtttta 14 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 418 aatcagagcacagggagccatctcattatctt 449 |||||||||||| |||||||| || ||||||| Sbjct: 185 aatcagagcacatggagccatttccttatctt 154
>emb|AJ429669.1|PGR429669 Pyrenacantha grandifolia chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1513 Score = 91.7 bits (46), Expect = 2e-15 Identities = 82/95 (86%), Gaps = 1/95 (1%) Strand = Plus / Minus Query: 489 atcagtttatgaaagagcccaatgc-nnnnnnntgcatgttgggtctttgaaacagttca 547 ||||||| ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 108 atcagttaatgaaagagcccaatgcaaaaaaaatgcatgttgggtctttgaaacagttca 49 Query: 548 aatcatttcgataataatccgtttgatctgtttta 582 ||||||| ||||||||| ||||||||||||||| Sbjct: 48 gatcattttgataataataagtttgatctgtttta 14 Score = 77.8 bits (39), Expect = 4e-11 Identities = 91/107 (85%), Gaps = 1/107 (0%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| |||| |||| | | | |||||||||| ||||||| |||||| ||| || Sbjct: 419 ttgataaggtgaatacccagtctattcaatgctaggcctaatgagtataaggatctcaaa 360 Query: 231 aaaacttcttttcgttctatgaactttaaggtgtatgaagtctcata 277 ||| || ||||| || ||||||||||||||||||||||||| ||||| Sbjct: 359 aaatct-ctttttgtactatgaactttaaggtgtatgaagtttcata 314 Score = 46.1 bits (23), Expect = 0.13 Identities = 77/95 (81%), Gaps = 5/95 (5%) Strand = Plus / Minus Query: 299 atagagactccatttcacttaggttgatttaatttagaccagaggcagacctaagtcaag 358 ||||||||| ||||| |||||||||||| || | ||||||||| ||||| |||||| Sbjct: 294 atagagacttcatttaacttaggttgatcta-----ggccagaggcaaacctacgtcaag 240 Query: 359 gtaatcctcctttgaaacactttggtattgctcct 393 ||| || |||||||||||||||| ||||||| Sbjct: 239 ataaaatccccttgaaacactttggtagtgctcct 205
>emb|AJ429665.1|CQU429665 Cardiopteris quinqueloba chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1520 Score = 91.7 bits (46), Expect = 2e-15 Identities = 82/95 (86%), Gaps = 1/95 (1%) Strand = Plus / Minus Query: 489 atcagtttatgaaagagcccaatgc-nnnnnnntgcatgttgggtctttgaaacagttca 547 ||||||| ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 108 atcagttaatgaaagagcccaatgcacaaaaaatgcatgttgggtctttgaaacagttca 49 Query: 548 aatcatttcgataataatccgtttgatctgtttta 582 ||||||| ||||||||| ||||||||||||||| Sbjct: 48 gatcattttgataataattagtttgatctgtttta 14 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Minus Query: 216 gataagggcctccaaaaaacttcttttcgttctatgaactttaaggtgtatgaagtctca 275 ||||||| |||| |||||| |||| |||||||||||||||||||||||||||||| ||| Sbjct: 370 gataaggacctcaaaaaaatctcttctcgttctatgaactttaaggtgtatgaagtttca 311 Query: 276 ta 277 || Sbjct: 310 ta 309 Score = 48.1 bits (24), Expect = 0.032 Identities = 57/68 (83%) Strand = Plus / Minus Query: 33 gatcttattgcaaaatcaatgtcttacttcatagattcgagagaataggagaacagtagc 92 |||||||||| ||||| |||||||||| |||| || ||| ||| | ||||||| |||| Sbjct: 569 gatcttattgagaaatcgatgtcttactccataactttgagggaacacgagaacaatagc 510 Query: 93 ctgacaaa 100 |||||||| Sbjct: 509 ctgacaaa 502
>emb|AJ429533.1|BLI429533 Byblis liniflora chloroplast atpE gene (partial), tRNA-Met gene and tRNA-Val gene Length = 1492 Score = 91.7 bits (46), Expect = 2e-15 Identities = 95/111 (85%), Gaps = 2/111 (1%) Strand = Plus / Minus Query: 456 aagaaaaactatggtggactaactgatctttaaatcagtttatgaaagagcccaatgc-n 514 |||||||| ||||||||| |||||||| ||| ||||||| ||||||||||||||||| Sbjct: 117 aagaaaaaatatggtggattaactgatatttctatcagttaatgaaagagcccaatgcaa 58 Query: 515 nnnnnntgcatgttgggtctttgaaacagttcaaatcatttcgataataat 565 ||||||||||||||||||||||||||| ||||||| ||||||||| Sbjct: 57 aaaaaatgcatgttgggtctttgaaacagttcagatcattt-gataataat 8 Score = 75.8 bits (38), Expect = 1e-10 Identities = 93/110 (84%), Gaps = 1/110 (0%) Strand = Plus / Minus Query: 210 aatgaggataagggcctccaaaaaacttcttttcgttctatgaactttaaggtgtatgaa 269 |||||| |||||| |||| ||||| || |||||||| ||||||||||||||||||||||| Sbjct: 360 aatgagtataaggtcctcgaaaaatct-cttttcgtcctatgaactttaaggtgtatgaa 302 Query: 270 gtctcatagttaactcttgcagtggaacgatagagactccatttcactta 319 || ||||| || | | || || |||||||||||||| ||||| ||||| Sbjct: 301 gtttcatatttgattttttaagccgaacgatagagacttcatttaactta 252 Score = 54.0 bits (27), Expect = 5e-04 Identities = 46/51 (90%), Gaps = 1/51 (1%) Strand = Plus / Minus Query: 341 aggcagacctaagtcaaggtaatcct-cctttgaaacactttggtattgct 390 ||||||||||| |||||| ||| ||| ||||||||||||||||||| |||| Sbjct: 235 aggcagacctacgtcaagataaccctacctttgaaacactttggtagtgct 185 Score = 42.1 bits (21), Expect = 2.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 33 gatcttattgcaaaatcaatgtcttacttcata 65 |||||||||| |||||||||||||||| |||| Sbjct: 521 gatcttattgagaaatcaatgtcttactccata 489
>emb|AJ429702.1|IBA429702 Ipomoea batatas chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1489 Score = 91.7 bits (46), Expect = 2e-15 Identities = 117/142 (82%), Gaps = 2/142 (1%) Strand = Plus / Minus Query: 443 ttatctttccgtaaagaaaaactatggtggactaactgatctttaaatcagtttatgaaa 502 |||| |||| || |||||||| ||||| |||| |||||| |||| |||||| |||||| Sbjct: 155 ttatttttctgtcaagaaaaaatatggcagactgactgatatttagatcagtcaatgaaa 96 Query: 503 gagcccaatgcnnnnnnn--tgcatgttgggtctttgaaacagttcaaatcatttcgata 560 ||||||||||| |||| |||||||||||||||||||||| ||||||| |||| Sbjct: 95 gagcccaatgcaaaaaaaaatgcacgttgggtctttgaaacagttcagatcattttgata 36 Query: 561 ataatccgtttgatctgtttta 582 |||| | ||||||||||||||| Sbjct: 35 ataagcagtttgatctgtttta 14 Score = 87.7 bits (44), Expect = 4e-14 Identities = 94/108 (87%), Gaps = 2/108 (1%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| |||| |||| | | | |||||||||| |||||||||||||| |||| || Sbjct: 426 ttgataaggtgaatagccagtctattcaatgctaggcctaatgaggataaggacctc-aa 368 Query: 231 aaaact-tcttttcgttctatgaactttaaggtgtatgaagtctcata 277 |||||| ||||||| || ||||||||||||||||||| |||| ||||| Sbjct: 367 aaaactctcttttcattatatgaactttaaggtgtatcaagtttcata 320 Score = 44.1 bits (22), Expect = 0.51 Identities = 51/60 (85%), Gaps = 3/60 (5%) Strand = Plus / Minus Query: 337 ccagaggcagacctaagtcaaggtaatc---ctcctttgaaacactttggtattgctcct 393 ||||||||||||||| |||||| ||| | | || |||||||||||||||| ||||||| Sbjct: 270 ccagaggcagacctacgtcaagataacctcccgcccttgaaacactttggtagtgctcct 211
>gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, complete sequence Length = 124050 Score = 89.7 bits (45), Expect = 1e-14 Identities = 63/69 (91%) Strand = Plus / Plus Query: 278 gttaactcttgcagtggaacgatagagactccatttcacttaggttgatttaatttagac 337 ||||||||||||| ||||| ||||||||||||||||||||| |||| |||||| |||||| Sbjct: 89757 gttaactcttgcattggaatgatagagactccatttcacttgggttaatttaaattagac 89816 Query: 338 cagaggcag 346 | ||||||| Sbjct: 89817 cggaggcag 89825
>gb|DQ365818.1| Leucophyllum pruinosum tRNA-Val gene, partial sequence; tRNA-Met gene, complete sequence; and AtpE (atpE) gene, partial cds; chloroplast Length = 1507 Score = 89.7 bits (45), Expect = 1e-14 Identities = 104/125 (83%), Gaps = 2/125 (1%) Strand = Plus / Minus Query: 460 aaaactatggtggactaactgatctttaaatcagtttatgaaagagcccaatgcnnnnnn 519 |||| ||||||||| || ||||| ||| ||||||| ||||||||||||||||| Sbjct: 138 aaaaatatggtggattagctgatatttctatcagttaatgaaagagcccaatgcaaaaaa 79 Query: 520 n--tgcatgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctg 577 ||||||||||||||||||||||||||| ||||||| |||||||| |||||||||| Sbjct: 78 aaatgcatgttgggtctttgaaacagttcagatcattttgataataagaagtttgatctg 19 Query: 578 tttta 582 ||||| Sbjct: 18 tttta 14 Score = 87.7 bits (44), Expect = 4e-14 Identities = 72/80 (90%), Gaps = 1/80 (1%) Strand = Plus / Minus Query: 198 aatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaacttt 257 |||||||||| ||||||| |||||| |||| ||||| || |||||||| ||||||||||| Sbjct: 397 aatgctaggcataatgagtataaggtcctcaaaaaatct-cttttcgtcctatgaacttt 339 Query: 258 aaggtgtatgaagtctcata 277 |||||||||||||| ||||| Sbjct: 338 aaggtgtatgaagtttcata 319 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/59 (88%), Gaps = 2/59 (3%) Strand = Plus / Minus Query: 337 ccagaggcagacctaagtcaaggtaatcct--cctttgaaacactttggtattgctcct 393 ||||||||||||||| |||||| ||| || ||||||||||||||||||| ||||||| Sbjct: 264 ccagaggcagacctacgtcaagataaccccaccctttgaaacactttggtaatgctcct 206
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 89.7 bits (45), Expect = 1e-14 Identities = 57/61 (93%) Strand = Plus / Minus Query: 522 gcatgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgtttt 581 |||||||||||||||||| |||||| |||||||| |||||||||| |||||||||||||| Sbjct: 55332 gcatgttgggtctttgaaccagttcgaatcattttgataataatcagtttgatctgtttt 55273 Query: 582 a 582 | Sbjct: 55272 a 55272 Score = 75.8 bits (38), Expect = 1e-10 Identities = 150/186 (80%), Gaps = 6/186 (3%) Strand = Plus / Minus Query: 209 taatgaggataagggcctccaaaaaacttcttttcgttctatgaactttaaggtgtatga 268 ||||||| |||||| |||||||||| ||||||| |||||||||||||||||||||| Sbjct: 55634 taatgagtataaggacctccaaaaattctcttttctccctatgaactttaaggtgtatga 55575 Query: 269 agtctcatagttaactcttgcagt-ggaacgatagagactccatttcacttaggttgatt 327 ||| ||||| || |||| || || ||||||||||||||||| ||||||| | Sbjct: 55574 agtttcatatttggttctttaagcagggccgatagagactccatttaacttagg-----t 55520 Query: 328 taatttagaccagaggcagacctaagtcaaggtaatcctcctttgaaacactttggtatt 387 |||| | | | | | ||||||||| |||||| ||| ||| |||||||||||||||||| | Sbjct: 55519 taatctcggcaaaaagcagacctacgtcaagataacccttctttgaaacactttggtagt 55460 Query: 388 gctcct 393 |||||| Sbjct: 55459 gctcct 55454 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 472 gactaactgatctttaaatcagtttatgaaagagcccaatgc 513 ||||||||||| ||| ||||||| ||||||||||||||||| Sbjct: 55384 gactaactgatatttcgatcagttaatgaaagagcccaatgc 55343
>emb|AJ429735.1|SBU429735 Stylidium bulbiferum chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1532 Score = 89.7 bits (45), Expect = 1e-14 Identities = 99/118 (83%), Gaps = 1/118 (0%) Strand = Plus / Minus Query: 466 atggtggactaactgatctttaaatcagtttatgaaagagcccaatgcnnnnnnn-tgca 524 |||| |||||||||||| ||| ||||||| ||||||||||||||||| |||| Sbjct: 131 atggcggactaactgatatttctatcagttaatgaaagagcccaatgcacaaaagatgca 72 Query: 525 tgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgtttta 582 ||||||||||||||||||| || ||||||| ||||||||| ||||||||||||||| Sbjct: 71 tgttgggtctttgaaacaggtccgatcattttgataataattagtttgatctgtttta 14 Score = 44.1 bits (22), Expect = 0.51 Identities = 31/34 (91%) Strand = Plus / Minus Query: 106 ggttcagtccgattcaggtgccaattcaggtgcc 139 |||||||||| ||||||||||| ||| ||||||| Sbjct: 477 ggttcagtccaattcaggtgcctatttaggtgcc 444 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 248 tatgaactttaaggtgtatgaagt 271 ||||||||||||||||||| |||| Sbjct: 335 tatgaactttaaggtgtataaagt 312
>emb|AJ430199.1|PVE430199 Paeonia veitchii chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1434 Score = 87.7 bits (44), Expect = 4e-14 Identities = 180/222 (81%), Gaps = 10/222 (4%) Strand = Plus / Minus Query: 297 cgatagagactccatttcacttaggttgattta-atttagaccagaggcagacctaagtc 355 ||||||||||||||||| |||||||||||| || || ||| ||| |||||| |||| ||| Sbjct: 300 cgatagagactccatttaacttaggttgatctagatctaggccaaaggcagccctacgtc 241 Query: 356 aaggtaatc----ctcctttgaaacactttggtattgctcctagatagatcataatacaa 411 ||| ||| | || |||||||||||||||||| ||||| | ||| || ||| | | Sbjct: 240 aagataaccaacccttctttgaaacactttggtagtgctcttggat----cagaattcta 185 Query: 412 aaaatcaatcagagcacagggagccatctcattatctttccgtaaagaaaaactatggtg 471 | ||| ||||||||| || ||| |||| || ||||||||| |||||||| ||||||| Sbjct: 184 ataatgaatcagagcgcatggaaccatttctttatctttctaccaagaaaaa-tatggtg 126 Query: 472 gactaactgatctttaaatcagtttatgaaagagcccaatgc 513 ||||||||||| ||| ||||||| |||||||||||||||| Sbjct: 125 gactaactgatatttctatcagttactgaaagagcccaatgc 84 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 525 tgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgtttta 582 ||||||||||||||||||||| |||||||| |||| ||| ||||||||||||||| Sbjct: 71 tgttgggtctttgaaacagtttgaatcattttgatacgaattagtttgatctgtttta 14 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 237 tcttttcgttctatgaactttaaggtgtatgaagtctcat 276 ||||||||| |||||||||||||||||||| |||| |||| Sbjct: 352 tcttttcgtcctatgaactttaaggtgtataaagtgtcat 313
>emb|AJ429742.1|VHI429742 Valeriana hirtella chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1513 Score = 87.7 bits (44), Expect = 4e-14 Identities = 92/107 (85%), Gaps = 2/107 (1%) Strand = Plus / Minus Query: 171 ttgataaggtaaatatccagcccactaaatgctaggcgtaatgaggataagggcctccaa 230 |||||||||| |||| |||| | | | |||||||||| ||||||| |||||| |||| || Sbjct: 414 ttgataaggtgaatacccagtctattcaatgctaggcataatgagtataaggtcctcaaa 355 Query: 231 aaaacttcttttcgttctatgaactttaaggtgtatgaagtctcata 277 ||| ||| |||||| ||||||||||||||||||||||||| ||||| Sbjct: 354 aaagctt--tttcgtcctatgaactttaaggtgtatgaagtttcata 310 Score = 58.0 bits (29), Expect = 3e-05 Identities = 60/69 (86%), Gaps = 1/69 (1%) Strand = Plus / Minus Query: 327 ttaatttagaccagaggcagacctaagtcaaggtaatcctcctttgaaacactttggtat 386 ||||| ||| ||||||||||||||| |||||| ||| || | |||||||||||||||| | Sbjct: 261 ttaatctaggccagaggcagacctacgtcaagataa-ccccttttgaaacactttggtct 203 Query: 387 tgctcctag 395 || |||||| Sbjct: 202 tgttcctag 194 Score = 56.0 bits (28), Expect = 1e-04 Identities = 85/105 (80%), Gaps = 1/105 (0%) Strand = Plus / Minus Query: 459 aaaaactatggtggactaactgatctttaaatcagtttatgaaagagcccaatgcnnnnn 518 ||||| ||||| ||| | |||||| ||| ||||||| ||||||||||||||||| Sbjct: 138 aaaaaatatggcggattgactgatatttctatcagttaatgaaagagcccaatgcaaaaa 79 Query: 519 nn-tgcatgttgggtctttgaaacagttcaaatcatttcgataat 562 ||| |||||||||||||||||||||| ||||||| |||||| Sbjct: 78 aaatgcctgttgggtctttgaaacagttctgatcattttgataat 34
>emb|AJ429689.1|LSP429689 Lindenbergia sp. Thulin 8079 chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1477 Score = 87.7 bits (44), Expect = 4e-14 Identities = 72/80 (90%), Gaps = 1/80 (1%) Strand = Plus / Minus Query: 198 aatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaacttt 257 |||||||||| ||||||| |||||| |||| ||||| || |||||||| ||||||||||| Sbjct: 396 aatgctaggcataatgagtataaggtcctcaaaaaatct-cttttcgtcctatgaacttt 338 Query: 258 aaggtgtatgaagtctcata 277 |||||||||||||| ||||| Sbjct: 337 aaggtgtatgaagtttcata 318 Score = 83.8 bits (42), Expect = 6e-13 Identities = 81/95 (85%), Gaps = 1/95 (1%) Strand = Plus / Minus Query: 489 atcagtttatgaaagagcccaatgc-nnnnnnntgcatgttgggtctttgaaacagttca 547 ||||||| ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 108 atcagttaatgaaagagcccaatgcaaaaaaaatgcatgttgggtctttgaaacagttca 49 Query: 548 aatcatttcgataataatccgtttgatctgtttta 582 ||||||| ||||| ||| ||||||||||||||| Sbjct: 48 gatcattttgataacaataagtttgatctgtttta 14
>emb|AJ429684.1|SCA429684 Streptocarpus caulescens chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1474 Score = 87.7 bits (44), Expect = 4e-14 Identities = 72/80 (90%), Gaps = 1/80 (1%) Strand = Plus / Minus Query: 198 aatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaacttt 257 |||||||||| ||||||| |||||| |||| |||||| ||||||||| ||||||||||| Sbjct: 403 aatgctaggcataatgagtataaggtcctc-aaaaaatatcttttcgtcctatgaacttt 345 Query: 258 aaggtgtatgaagtctcata 277 |||||||||||||| ||||| Sbjct: 344 aaggtgtatgaagtttcata 325 Score = 85.7 bits (43), Expect = 1e-13 Identities = 105/128 (82%), Gaps = 1/128 (0%) Strand = Plus / Minus Query: 456 aagaaaaactatggtggactaactgatctttaaatcagtttatgaaagagcccaatgcnn 515 |||||||| ||||| ||| |||||||| ||| ||||||| ||||| ||||||||||| Sbjct: 141 aagaaaaaatatggcggattaactgatatttctatcagttaatgaacgagcccaatgcaa 82 Query: 516 nnnnn-tgcatgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgat 574 |||| |||||||||||||||||||||| ||||||| ||||||||| ||||||| Sbjct: 81 aaaatatgcacgttgggtctttgaaacagttcagatcattttgataataataagtttgat 22 Query: 575 ctgtttta 582 ||| ||| Sbjct: 21 ctgwytta 14 Score = 50.1 bits (25), Expect = 0.008 Identities = 50/57 (87%), Gaps = 1/57 (1%) Strand = Plus / Minus Query: 338 cagaggcagacctaagtcaaggtaatcct-cctttgaaacactttggtattgctcct 393 |||||||| ||||| |||||| ||| || ||||||||||||||||||| ||||||| Sbjct: 268 cagaggcaaacctacgtcaagataaccccacctttgaaacactttggtagtgctcct 212
>emb|AJ429530.1|ADE429530 Androya decaryi chloroplast atpE gene (partial), tRNA-Met gene and tRNA-Val gene Length = 1461 Score = 87.7 bits (44), Expect = 4e-14 Identities = 72/80 (90%), Gaps = 1/80 (1%) Strand = Plus / Minus Query: 198 aatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaacttt 257 |||||||||| ||||||| |||||| |||| ||||| || |||||||| ||||||||||| Sbjct: 368 aatgctaggcataatgagtataaggtcctcaaaaaatct-cttttcgtcctatgaacttt 310 Query: 258 aaggtgtatgaagtctcata 277 |||||||||||||| ||||| Sbjct: 309 aaggtgtatgaagtttcata 290 Score = 67.9 bits (34), Expect = 3e-08 Identities = 40/42 (95%) Strand = Plus / Minus Query: 521 tgcatgttgggtctttgaaacagttcaaatcatttcgataat 562 ||||||||||||||||||||||||||| ||||||| |||||| Sbjct: 42 tgcatgttgggtctttgaaacagttcagatcattttgataat 1
>emb|AL662968.3|OSJN00168 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0035M09, complete sequence Length = 152732 Score = 83.8 bits (42), Expect = 6e-13 Identities = 48/50 (96%) Strand = Plus / Minus Query: 236 ttcttttcgttctatgaactttaaggtgtatgaagtctcatagttaactc 285 |||||||||||||||||||||||| ||||||||||||||||||| ||||| Sbjct: 60097 ttcttttcgttctatgaactttaatgtgtatgaagtctcatagtcaactc 60048
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 83.8 bits (42), Expect = 6e-13 Identities = 48/50 (96%) Strand = Plus / Minus Query: 236 ttcttttcgttctatgaactttaaggtgtatgaagtctcatagttaactc 285 |||||||||||||||||||||||| ||||||||||||||||||| ||||| Sbjct: 30656366 ttcttttcgttctatgaactttaatgtgtatgaagtctcatagtcaactc 30656317 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 40 ttgcaaaatcaatgtcttact 60 ||||||||||||||||||||| Sbjct: 21779732 ttgcaaaatcaatgtcttact 21779712
>emb|AJ429710.1|EPE429710 Eremosyne pectinata chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1553 Score = 83.8 bits (42), Expect = 6e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 521 tgcatgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgttt 580 ||||||||||||||||||||||||||| ||||| |||||||||| ||||||||||||| Sbjct: 75 tgcatgttgggtctttgaaacagttcaggccattttgataataatcagtttgatctgttt 16 Query: 581 ta 582 || Sbjct: 15 ta 14 Score = 65.9 bits (33), Expect = 1e-07 Identities = 67/77 (87%), Gaps = 1/77 (1%) Strand = Plus / Minus Query: 201 gctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaactttaag 260 ||||||| ||||||| ||| || |||| |||||| | |||||||| |||||||||| ||| Sbjct: 436 gctaggcataatgagtatacggacctcaaaaaaaat-cttttcgtcctatgaacttgaag 378 Query: 261 gtgtatgaagtctcata 277 ||||||||||| ||||| Sbjct: 377 gtgtatgaagtttcata 361 Score = 58.0 bits (29), Expect = 3e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 465 tatggtggactaactgatctttaaatcagtttatgaaagagcccaatgc 513 ||||| |||||||| ||| |||| ||||||| ||||||||||||||||| Sbjct: 137 tatggcggactaaccgatatttatatcagttaatgaaagagcccaatgc 89 Score = 48.1 bits (24), Expect = 0.032 Identities = 48/56 (85%) Strand = Plus / Minus Query: 45 aaatcaatgtcttacttcatagattcgagagaataggagaacagtagcctgacaaa 100 ||||| |||||||||| |||| || ||| ||| ||||||||| |||||||||||| Sbjct: 591 aaatcgatgtcttactccataactttgagggaacaggagaacaatagcctgacaaa 536
>emb|AJ429688.1|CSO429688 Cyclocheilon somaliense chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1485 Score = 83.8 bits (42), Expect = 6e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 521 tgcatgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgttt 580 ||||||||||||||||||||||| ||| ||||||| ||||||||| ||||||||||||| Sbjct: 75 tgcatgttgggtctttgaaacagctcagatcattttgataataataagtttgatctgttt 16 Query: 581 ta 582 || Sbjct: 15 ta 14 Score = 75.8 bits (38), Expect = 1e-10 Identities = 66/74 (89%), Gaps = 1/74 (1%) Strand = Plus / Minus Query: 198 aatgctaggcgtaatgaggataagggcctccaaaaaacttcttttcgttctatgaacttt 257 |||||||||| ||||||| |||||| |||| ||||| || |||||||| |||||||||| Sbjct: 389 aatgctaggcataatgagtataaggtcctcaaaaaatct-cttttcgtcttatgaacttt 331 Query: 258 aaggtgtatgaagt 271 |||||||||||||| Sbjct: 330 aaggtgtatgaagt 317 Score = 67.9 bits (34), Expect = 3e-08 Identities = 91/110 (82%), Gaps = 5/110 (4%) Strand = Plus / Minus Query: 409 caaaaaatcaatcagagcacagggagccatctcattatctt-----tccgtaaagaaaaa 463 |||| ||| |||||||||||| ||||||||||| ||||||| || || |||||||| Sbjct: 197 caaataatgaatcagagcacatggagccatctccttatcttatttttcggtcaagaaaaa 138 Query: 464 ctatggtggactaactgatctttaaatcagtttatgaaagagcccaatgc 513 ||||| ||| | ||||| |||| ||||||| ||||||||||||||||| Sbjct: 137 atatggcggattggctgatatttatatcagttaatgaaagagcccaatgc 88 Score = 52.0 bits (26), Expect = 0.002 Identities = 51/58 (87%), Gaps = 1/58 (1%) Strand = Plus / Minus Query: 337 ccagaggcagacctaagtcaaggtaatcct-cctttgaaacactttggtattgctcct 393 ||||||||||||||| |||||| ||| || || |||||||||||||||| ||||||| Sbjct: 267 ccagaggcagacctacgtcaagataaccccgcccttgaaacactttggtagtgctcct 210
>emb|AJ430391.1|CEL430391 Campanula elatines chloroplast tRNA-Val gene (partial) and tRNA-Met gene (partial) Length = 1004 Score = 81.8 bits (41), Expect = 2e-12 Identities = 92/110 (83%), Gaps = 1/110 (0%) Strand = Plus / Minus Query: 472 gactaactgatctttaaatcagtttatgaaagagcccaatgcnnnnnnn-tgcatgttgg 530 ||||||||||| |||| ||||||| ||||||||||||||||| |||||||||| Sbjct: 125 gactaactgatatttatatcagttaatgaaagagcccaatgcccaaaaaatgcatgttgg 66 Query: 531 gtctttgaaacagttcaaatcatttcgataataatccgtttgatctgttt 580 ||||||||||||||||| |||||| || ||||| ||||||||||||| Sbjct: 65 gtctttgaaacagttcagatcattgtaatcataataagtttgatctgttt 16 Score = 77.8 bits (39), Expect = 4e-11 Identities = 42/43 (97%) Strand = Plus / Minus Query: 228 caaaaaacttcttttcgttctatgaactttaaggtgtatgaag 270 ||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 355 caaaaaagttcttttcgttctatgaactttaaggtgtatgaag 313 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 337 ccagaggcagacctaagtcaaggtaatcctcctttgaaacactttggt 384 ||||||||| ||||| |||||| ||| || |||||||||||||||||| Sbjct: 252 ccagaggcaaacctacgtcaagataaaccacctttgaaacactttggt 205
>gb|AY694130.1| Pennisetum glaucum clone PGE015 tRNA-Val (trnV) gene, partial sequence; chloroplast Length = 593 Score = 79.8 bits (40), Expect = 9e-12 Identities = 55/60 (91%) Strand = Plus / Minus Query: 523 catgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgtttta 582 |||||||||| |||||||||| || |||||||||||||| ||| |||||||||||||||| Sbjct: 427 catgttgggtttttgaaacaggtcgaatcatttcgataacaattcgtttgatctgtttta 368
>dbj|AB019904.1| Cathaya argyrophylla chloroplast gene for tRNA-Val (UAC), partial sequence Length = 554 Score = 79.8 bits (40), Expect = 9e-12 Identities = 78/93 (83%) Strand = Plus / Plus Query: 472 gactaactgatctttaaatcagtttatgaaagagcccaatgcnnnnnnntgcatgttggg 531 ||||||| ||||||| ||||||| ||||||||||||||||| ||||||||||| Sbjct: 444 gactaaccgatctttccatcagttaatgaaagagcccaatgcgaaaaaatgcatgttggg 503 Query: 532 tctttgaaacagttcaaatcatttcgataataa 564 | ||| ||||||||||||||||| |||||||| Sbjct: 504 ttcttggaacagttcaaatcattttgataataa 536 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 236 ttcttttcgttctatgaactttaaggtgtatgaag 270 ||||||||| |||||||||||| |||||||||||| Sbjct: 232 ttcttttcgctctatgaacttttaggtgtatgaag 266
>dbj|AB019903.1| Pseudolarix amabilis chloroplast gene for tRNA-Val (UAC), partial sequence Length = 547 Score = 79.8 bits (40), Expect = 9e-12 Identities = 78/93 (83%) Strand = Plus / Plus Query: 472 gactaactgatctttaaatcagtttatgaaagagcccaatgcnnnnnnntgcatgttggg 531 ||||||| ||||||| ||||||| ||||||||||||||||| ||||||||||| Sbjct: 437 gactaaccgatctttccatcagttaatgaaagagcccaatgcgataaaatgcatgttggg 496 Query: 532 tctttgaaacagttcaaatcatttcgataataa 564 | ||| ||||||||||||||||| |||||||| Sbjct: 497 ttcttggaacagttcaaatcattttgataataa 529 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 236 ttcttttcgttctatgaactttaaggtgtatgaagtctcata 277 ||||||||| |||||||||||| ||||||||||||| ||||| Sbjct: 227 ttcttttcgctctatgaacttttaggtgtatgaagtgtcata 268
>dbj|AB019900.1| Larix decidua chloroplast gene for tRNA-Val (UAC), partial sequence Length = 548 Score = 79.8 bits (40), Expect = 9e-12 Identities = 78/93 (83%) Strand = Plus / Plus Query: 472 gactaactgatctttaaatcagtttatgaaagagcccaatgcnnnnnnntgcatgttggg 531 ||||||| ||||||| ||||||| ||||||||||||||||| ||||||||||| Sbjct: 438 gactaaccgatctttccatcagttaatgaaagagcccaatgcgagaaaatgcatgttggg 497 Query: 532 tctttgaaacagttcaaatcatttcgataataa 564 | ||| ||||||||||||||||| |||||||| Sbjct: 498 ttcttggaacagttcaaatcattttgataataa 530 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 236 ttcttttcgttctatgaactttaaggtgtatgaagtctcata 277 ||||||||| |||||||||||| ||||||||||||| ||||| Sbjct: 227 ttcttttcgctctatgaacttttaggtgtatgaagtgtcata 268
>emb|AL713943.3|CNS07YPC Oryza sativa chromosome 12, . BAC OSJNBa0030G16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 182172 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 66 gattcgagagaataggagaacagtagcctgacaaacagtcggttcagtccgatt 119 |||||||||||||||||||| ||| |||||||||| ||| |||||||||||||| Sbjct: 168043 gattcgagagaataggagaatagttgcctgacaaatagttggttcagtccgatt 168096
>emb|AJ429724.1|PRU429724 Phyllonoma ruscifolia chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1470 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Minus Query: 521 tgcatgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgttt 580 ||||||||||||||||||||||||||| || |||| ||||||||| ||||||| ||||| Sbjct: 75 tgcatgttgggtctttgaaacagttcagattattttgataataattagtttgatttgttt 16 Query: 581 ta 582 || Sbjct: 15 ta 14 Score = 71.9 bits (36), Expect = 2e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 218 taagggcctccaaaaaacttcttttcgttctatgaactttaaggtgtatgaagtctcata 277 ||||| |||| |||||| ||||||||| ||||||||||||||||||||||||| ||||| Sbjct: 366 taaggacctcaaaaaaatctcttttcgtcctatgaactttaaggtgtatgaagtttcata 307 Score = 52.0 bits (26), Expect = 0.002 Identities = 81/98 (82%), Gaps = 6/98 (6%) Strand = Plus / Minus Query: 297 cgatagagactccatttcacttaggttgatttaatttagaccagaggcagacctaagtca 356 ||||||||||| ||||| |||||||||| || ||| || ||||||||||| |||| Sbjct: 285 cgatagagacttcatttaacttaggttg-----atctaggccgaaggcagacctacgtca 231 Query: 357 aggt-aatcctcctttgaaacactttggtattgctcct 393 || | ||||| | ||||||||||||||||| ||||||| Sbjct: 230 agataaatccccttttgaaacactttggtagtgctcct 193 Score = 50.1 bits (25), Expect = 0.008 Identities = 70/85 (82%) Strand = Plus / Minus Query: 16 atgcaatgaacataatcgatcttattgcaaaatcaatgtcttacttcatagattcgagag 75 ||||||| || | ||| |||||||||| ||||| |||||||||| |||| || ||| | Sbjct: 538 atgcaatcaaaagaattgatcttattgagaaatcgatgtcttactccataactttgaggg 479 Query: 76 aataggagaacagtagcctgacaaa 100 || | ||||||| |||||||||||| Sbjct: 478 aacaagagaacaatagcctgacaaa 454
>emb|AJ429695.1|PAR429695 Plantago argentea chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1477 Score = 75.8 bits (38), Expect = 1e-10 Identities = 56/62 (90%) Strand = Plus / Minus Query: 521 tgcatgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgttt 580 |||||||||||||||||||| |||||| ||||||| |||| ||||| |||||| |||||| Sbjct: 75 tgcatgttgggtctttgaaatagttcagatcatttggatactaatcagtttgagctgttt 16 Query: 581 ta 582 || Sbjct: 15 ta 14 Score = 61.9 bits (31), Expect = 2e-06 Identities = 143/178 (80%), Gaps = 8/178 (4%) Strand = Plus / Minus Query: 209 taatgaggataagggcctccaaaaaacttcttttcgttctatgaactttaaggtgtatga 268 ||||||||| |||| |||| ||||| |||| |||| |||||||||||||||||||||| Sbjct: 386 taatgaggacaaggtcctc--aaaaatctcttgtcgtcctatgaactttaaggtgtatga 329 Query: 269 agtctcatagttaactcttgcagtggaacgatagagactccatttcacttaggttgattt 328 ||| ||||| || | | || || |||||||||||||| |||| ||||| |||| | Sbjct: 328 agtttcatatttgattttttaagccgaacgatagagacttaatttaacttaaaatgatct 269 Query: 329 aatttagaccagaggcagacctaagtcaaggtaat-cctcctttgaaacactttggta 385 || ||| |||||||||||| |||||| |||| || || |||||||||||||||| Sbjct: 268 aa-----acctgaggcagacctacgtcaagataatcccacccttgaaacactttggta 216
>emb|AJ429676.1|GPU429676 Gentiana purpurea chloroplast atpE gene (partial), tRNA-Val gene (partial) and tRNA-Met gene Length = 1543 Score = 75.8 bits (38), Expect = 1e-10 Identities = 57/62 (91%), Gaps = 1/62 (1%) Strand = Plus / Minus Query: 521 tgcatgttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgttt 580 ||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||| Sbjct: 74 tgcatgttgggtctttgaaacagttcagatcattttgataataa-aagtttgatctgttt 16 Query: 581 ta 582 || Sbjct: 15 ta 14
>dbj|AB097792.1| Pinus sylvestris chloroplast trnV gene, intron, partial sequence Length = 492 Score = 71.9 bits (36), Expect = 2e-09 Identities = 77/93 (82%) Strand = Plus / Plus Query: 472 gactaactgatctttaaatcagtttatgaaagagcccaatgcnnnnnnntgcatgttggg 531 ||||||| ||||||| ||||||| ||||||||||||||||| ||||||||||| Sbjct: 400 gactaaccgatctttccatcagttaatgaaagagcccaatgcgagaaaatgcatgttggg 459 Query: 532 tctttgaaacagttcaaatcatttcgataataa 564 | ||| |||||||||||| |||| |||||||| Sbjct: 460 ttcttggaacagttcaaattattttgataataa 492 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 236 ttcttttcgttctatgaactttaaggtgtatgaagtctcata 277 ||||||||| |||||||||||| ||||||||||||| ||||| Sbjct: 189 ttcttttcgctctatgaacttttaggtgtatgaagtgtcata 230
>gb|AC160516.1| Medicago truncatula chromosome 7 BAC clone mth2-66d22, complete sequence Length = 116154 Score = 71.9 bits (36), Expect = 2e-09 Identities = 142/176 (80%), Gaps = 4/176 (2%) Strand = Plus / Plus Query: 410 aaaaaatcaatcagagcacagggagccatctcattat-ctttccgtaaagaaaaactatg 468 ||||||| |||||||||||||||| ||| || || | |||| ||||||||||| ||| Sbjct: 82500 aaaaaataaatcagagcacagggaatcatttcctttttctttgtgtaaagaaaaaagatg 82559 Query: 469 gtggactaactgatctttaaatcagtttatgaaagagcccaatgcnnnnnnn--tgcatg 526 || |||||| |||| ||| ||||||| |||||| |||||||||| |||| | Sbjct: 82560 gtagactaattgatatttctatcagttaatgaaaaagcccaatgcaaaaaaaaatgcacg 82619 Query: 527 ttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgtttta 582 |||||| ||| ||||| |||||||||||| ||||||||| ||||||||||||||| Sbjct: 82620 ttgggtttttaaaacaattcaaatcattttgataataat-agtttgatctgtttta 82674 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 248 tatgaactttaaggtgtatgaagt 271 |||||||||||||||||||||||| Sbjct: 82332 tatgaactttaaggtgtatgaagt 82355
>gb|AC093544.8| Medicago truncatula chloroplast, complete genome, complete sequence Length = 124033 Score = 71.9 bits (36), Expect = 2e-09 Identities = 142/176 (80%), Gaps = 4/176 (2%) Strand = Plus / Minus Query: 410 aaaaaatcaatcagagcacagggagccatctcattat-ctttccgtaaagaaaaactatg 468 ||||||| |||||||||||||||| ||| || || | |||| ||||||||||| ||| Sbjct: 114153 aaaaaataaatcagagcacagggaatcatttcctttttctttgtgtaaagaaaaaagatg 114094 Query: 469 gtggactaactgatctttaaatcagtttatgaaagagcccaatgcnnnnnnn--tgcatg 526 || |||||| |||| ||| ||||||| |||||| |||||||||| |||| | Sbjct: 114093 gtagactaattgatatttctatcagttaatgaaaaagcccaatgcaaaaaaaaatgcacg 114034 Query: 527 ttgggtctttgaaacagttcaaatcatttcgataataatccgtttgatctgtttta 582 |||||| ||| ||||| |||||||||||| ||||||||| ||||||||||||||| Sbjct: 114033 ttgggtttttaaaacaattcaaatcattttgataataat-agtttgatctgtttta 113979 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 248 tatgaactttaaggtgtatgaagtctcat 276 |||||||||||||||||||||||| |||| Sbjct: 114321 tatgaactttaaggtgtatgaagtttcat 114293
>dbj|AB081080.1| Pinus echinata chloroplast trnV gene, intron Length = 492 Score = 71.9 bits (36), Expect = 2e-09 Identities = 77/93 (82%) Strand = Plus / Plus Query: 472 gactaactgatctttaaatcagtttatgaaagagcccaatgcnnnnnnntgcatgttggg 531 ||||||| ||||||| ||||||| ||||||||||||||||| ||||||||||| Sbjct: 400 gactaaccgatctttccatcagttaatgaaagagcccaatgcgagaaaatgcatgttggg 459 Query: 532 tctttgaaacagttcaaatcatttcgataataa 564 | ||| |||||||||||| |||| |||||||| Sbjct: 460 ttcttggaacagttcaaattattttgataataa 492 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 236 ttcttttcgttctatgaactttaaggtgtatgaagtctcata 277 ||||||||| |||||||||||| ||||||||||||| ||||| Sbjct: 189 ttcttttcgctctatgaacttttaggtgtatgaagtgtcata 230
>dbj|AB081079.1| Pinus serotina chloroplast trnV gene, intron Length = 492 Score = 71.9 bits (36), Expect = 2e-09 Identities = 77/93 (82%) Strand = Plus / Plus Query: 472 gactaactgatctttaaatcagtttatgaaagagcccaatgcnnnnnnntgcatgttggg 531 ||||||| ||||||| ||||||| ||||||||||||||||| ||||||||||| Sbjct: 400 gactaaccgatctttccatcagttaatgaaagagcccaatgcgagaaaatgcatgttggg 459 Query: 532 tctttgaaacagttcaaatcatttcgataataa 564 | ||| |||||||||||| |||| |||||||| Sbjct: 460 ttcttggaacagttcaaattattttgataataa 492 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 236 ttcttttcgttctatgaactttaaggtgtatgaagtctcata 277 ||||||||| |||||||||||| ||||||||||||| ||||| Sbjct: 189 ttcttttcgctctatgaacttttaggtgtatgaagtgtcata 230
>dbj|AB081078.1| Pinus elliottii chloroplast trnV gene, intron Length = 492 Score = 71.9 bits (36), Expect = 2e-09 Identities = 77/93 (82%) Strand = Plus / Plus Query: 472 gactaactgatctttaaatcagtttatgaaagagcccaatgcnnnnnnntgcatgttggg 531 ||||||| ||||||| ||||||| ||||||||||||||||| ||||||||||| Sbjct: 400 gactaaccgatctttccatcagttaatgaaagagcccaatgcgagaaaatgcatgttggg 459 Query: 532 tctttgaaacagttcaaatcatttcgataataa 564 | ||| |||||||||||| |||| |||||||| Sbjct: 460 ttcttggaacagttcaaattattttgataataa 492 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 236 ttcttttcgttctatgaactttaaggtgtatgaagtctcata 277 ||||||||| |||||||||||| ||||||||||||| ||||| Sbjct: 189 ttcttttcgctctatgaacttttaggtgtatgaagtgtcata 230 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,607,934 Number of Sequences: 3902068 Number of extensions: 5607934 Number of successful extensions: 108159 Number of sequences better than 10.0: 401 Number of HSP's better than 10.0 without gapping: 411 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 105734 Number of HSP's gapped (non-prelim): 2117 length of query: 582 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 559 effective length of database: 17,143,297,704 effective search space: 9583103416536 effective search space used: 9583103416536 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
