ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd22o15
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|XM_479599.1| Oryza sativa (japonica cultivar-group), mRNA 571 e-160
2dbj|AK064838.1| Oryza sativa (japonica cultivar-group) cDNA clon... 555 e-155
3dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 174 2e-40
4dbj|AP003813.4| Oryza sativa (japonica cultivar-group) genomic D... 174 2e-40
5dbj|AP003818.2| Oryza sativa (japonica cultivar-group) genomic D... 174 2e-40
6dbj|AK062471.1| Oryza sativa (japonica cultivar-group) cDNA clon... 127 4e-26
7gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 105 2e-19
8gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare str... 105 2e-19
9dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 105 2e-19
10gb|AF320324.1|AF320324 Hordeum vulgare arabinoxylan arabinofuran... 58 3e-05
11gb|AF429985.1|AF429985 Lycopersicon esculentum arabinosidase ARA... 54 5e-04
12dbj|AB073310.1| Lycopersicon esculentum LeARF1 mRNA for alpha-L-... 54 5e-04
13gb|AC137839.19| Medicago truncatula clone mth2-34j11, complete s... 42 2.0
14gb|AC147483.13| Medicago truncatula clone mth2-22o7, complete se... 42 2.0
15gb|AY309436.1| Malus x domestica alpha-L-arabinofuranosidase (AF... 42 2.0
16gb|AC148241.21| Medicago truncatula clone mth2-14m21, complete s... 42 2.0
17dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.0
18dbj|AB073311.1| Pyrus pyrifolia PPARF1 mRNA for alpha-L-arabinof... 42 2.0
19gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 2.0
20emb|BX000507.2|CNS08CDX Oryza sativa chromosome 12, . BAC OJ1003... 42 2.0
21gb|AC119671.4| Oryza sativa (japonica cultivar-group) chromosome... 40 7.9
22ref|XM_362783.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 7.9
23gb|AY294068.1| Pinus monticola putative NBS-LRR protein G8506 (R... 40 7.9
24gb|AY294065.1| Pinus monticola putative NBS-LRR protein G8502 (R... 40 7.9
25gb|CP000053.1| Rickettsia felis URRWXCal2, complete genome 40 7.9
26gb|AF320325.1|AF320325 Hordeum vulgare arabinoxylan arabinofuran... 40 7.9
27dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.9
28dbj|AB193032.1| Corynebacterium glutamicum DNA, strain specific ... 40 7.9
29gb|AC005035.2| Homo sapiens BAC clone RP11-353P23 from 2, comple... 40 7.9
30gb|AC010873.12| Homo sapiens BAC clone RP11-112N16 from 2, compl... 40 7.9
31dbj|AK098954.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.9
32gb|AY106254.1| Zea mays PCO073074 mRNA sequence 40 7.9
33gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.9
34emb|AL845320.10| Zebrafish DNA sequence from clone DKEY-30J19, c... 40 7.9

>ref|XM_479599.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1995

 Score =  571 bits (288), Expect = e-160
 Identities = 495/564 (87%)
 Strand = Plus / Plus

                                                                        
Query: 21   tcaatgatgcctggggatactggactgacgatggactcggattctttgagttccttcagt 80
            |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| 
Sbjct: 878  tcaatgatgcctggggatactggactgatgatggacttggattctttgagttccttcagc 937

                                                                        
Query: 81   tagctgaagaccttggtgcttcccctgtttgggtggtgaatgatggagcaagcattaacg 140
            ||||||||||||| |||||||| || || |||||||| |||||||||||||||   || |
Sbjct: 938  tagctgaagacctcggtgcttcgccagtatgggtggtcaatgatggagcaagccaaaatg 997

                                                                        
Query: 141  aagaagttcctactgcaataattgcatctctggtgaaggatgttgttgatggtatcgagt 200
            |||| ||  ||||||||| |||||||||  | |||||||| || |||||||| |||||||
Sbjct: 998  aagaggtatctactgcaacaattgcatcattagtgaaggacgtggttgatggcatcgagt 1057

                                                                        
Query: 201  ttgcaaggggaggggtcaacactacatggggttcagttcgtgcggcaatggggcatcctc 260
            |||| |||||||||  ||| ||||||||||||||||||||||| || ||||| ||||| |
Sbjct: 1058 ttgccaggggagggcccaagactacatggggttcagttcgtgcagcgatgggtcatccac 1117

                                                                        
Query: 261  agccctttaagcttgattatgtttcaatagggaatcaagaatgctggatgctctactaca 320
            | |||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1118 aaccctttaaccttgactatgtttcaatagggaatcaagaatgctggatgctctattaca 1177

                                                                        
Query: 321  gaggcaattaccgaaagttctattctgcgattaaagctgcctacccagacatcaatatta 380
            |||||||||||| ||| |||||||| ||||||||||||||||| |||||||||||  |  
Sbjct: 1178 gaggcaattaccaaaaattctattccgcgattaaagctgcctatccagacatcaacgtcg 1237

                                                                        
Query: 381  tatcaagctgtgataagtcaactatttcggcatccaaccctgccgatctatatgatgttc 440
            | ||||| |||||||| || ||||||||  | ||||||||||||||||||||||||||||
Sbjct: 1238 tgtcaagttgtgataaatccactatttctccgtccaaccctgccgatctatatgatgttc 1297

                                                                        
Query: 441  atgtctatgcatcttctgctaatatgttttccagaactagtatgtttgacaacacaccac 500
            |||| ||| | || |||  | ||||||||||||||||||||||||||||||| ||  | |
Sbjct: 1298 atgtttatacctcatctagtgatatgttttccagaactagtatgtttgacaatacgacgc 1357

                                                                        
Query: 501  gcagcggacctaaggcaattgttagcgagtacgccgtgactggaaacgacgctggcaaag 560
            |||| ||||| ||||||||||| || |||||||| ||||||||||| || ||||||||||
Sbjct: 1358 gcagtggaccgaaggcaattgtaagtgagtacgctgtgactggaaaggatgctggcaaag 1417

                                    
Query: 561  gaacactggtagcagcactcgcag 584
            |||||||||||| |||||| ||||
Sbjct: 1418 gaacactggtagaagcactagcag 1441



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>dbj|AK064838.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000F23, full
            insert sequence
          Length = 2574

 Score =  555 bits (280), Expect = e-155
 Identities = 493/564 (87%)
 Strand = Plus / Plus

                                                                        
Query: 21   tcaatgatgcctggggatactggactgacgatggactcggattctttgagttccttcagt 80
            |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| 
Sbjct: 1117 tcaatgatgcctggggatactggactgatgatggacttggattctttgagttccttcagc 1176

                                                                        
Query: 81   tagctgaagaccttggtgcttcccctgtttgggtggtgaatgatggagcaagcattaacg 140
            ||||||||||||| |||||||| || || |||||||| |||||||||||||||   || |
Sbjct: 1177 tagctgaagacctcggtgcttcgccagtatgggtggtcaatgatggagcaagccaaaatg 1236

                                                                        
Query: 141  aagaagttcctactgcaataattgcatctctggtgaaggatgttgttgatggtatcgagt 200
            |||| ||  ||||||||| |||||||||  | |||||||| || |||||||| |||||||
Sbjct: 1237 aagaggtatctactgcaacaattgcatcattagtgaaggacgtggttgatggcatcgagt 1296

                                                                        
Query: 201  ttgcaaggggaggggtcaacactacatggggttcagttcgtgcggcaatggggcatcctc 260
            |||| |||||||||  ||| ||||||||||||||||||||||| || ||||| ||||| |
Sbjct: 1297 ttgccaggggagggcccaagactacatggggttcagttcgtgcagcgatgggtcatccac 1356

                                                                        
Query: 261  agccctttaagcttgattatgtttcaatagggaatcaagaatgctggatgctctactaca 320
            | |||||||| ||||| ||||||||||||||||||||||||||||||||||| || ||||
Sbjct: 1357 aaccctttaaccttgactatgtttcaatagggaatcaagaatgctggatgctgtattaca 1416

                                                                        
Query: 321  gaggcaattaccgaaagttctattctgcgattaaagctgcctacccagacatcaatatta 380
            |||||||||||| ||| |||||||| ||||||||||||||||| |||||||||||  |  
Sbjct: 1417 gaggcaattaccaaaaattctattccgcgattaaagctgcctatccagacatcaacgtcg 1476

                                                                        
Query: 381  tatcaagctgtgataagtcaactatttcggcatccaaccctgccgatctatatgatgttc 440
            | ||||| |||| ||| || ||||||||  | ||||||||||||||||||||||||||||
Sbjct: 1477 tgtcaagttgtggtaaatccactatttctccgtccaaccctgccgatctatatgatgttc 1536

                                                                        
Query: 441  atgtctatgcatcttctgctaatatgttttccagaactagtatgtttgacaacacaccac 500
            |||| ||| | || |||  | ||||||||||||||||||||||||||||||| ||  | |
Sbjct: 1537 atgtttatacctcatctagtgatatgttttccagaactagtatgtttgacaatacgacgc 1596

                                                                        
Query: 501  gcagcggacctaaggcaattgttagcgagtacgccgtgactggaaacgacgctggcaaag 560
            |||| ||||| ||||||||||| || |||||||| ||||||||||| || ||||||||||
Sbjct: 1597 gcagtggaccgaaggcaattgtaagtgagtacgctgtgactggaaaggatgctggcaaag 1656

                                    
Query: 561  gaacactggtagcagcactcgcag 584
            |||||||||||| |||||| ||||
Sbjct: 1657 gaacactggtagaagcactagcag 1680



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  174 bits (88), Expect = 2e-40
 Identities = 127/140 (90%)
 Strand = Plus / Plus

                                                                            
Query: 185      gttgatggtatcgagtttgcaaggggaggggtcaacactacatggggttcagttcgtgcg 244
                |||||||| ||||||||||| |||||||||  ||| ||||||||||||||||||||||| 
Sbjct: 29132520 gttgatggcatcgagtttgccaggggagggcccaagactacatggggttcagttcgtgca 29132579

                                                                            
Query: 245      gcaatggggcatcctcagccctttaagcttgattatgtttcaatagggaatcaagaatgc 304
                || ||||| ||||| || |||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 29132580 gcgatgggtcatccacaaccctttaaccttgactatgtttcaatagggaatcaagaatgc 29132639

                                    
Query: 305      tggatgctctactacagagg 324
                ||||||||||| ||||||||
Sbjct: 29132640 tggatgctctattacagagg 29132659



 Score =  125 bits (63), Expect = 2e-25
 Identities = 108/123 (87%)
 Strand = Plus / Plus

                                                                            
Query: 322      aggcaattaccgaaagttctattctgcgattaaagctgcctacccagacatcaatattat 381
                ||||||||||| ||| |||||||| ||||||||||||||||| |||||||||||  |  |
Sbjct: 29132943 aggcaattaccaaaaattctattccgcgattaaagctgcctatccagacatcaacgtcgt 29133002

                                                                            
Query: 382      atcaagctgtgataagtcaactatttcggcatccaaccctgccgatctatatgatgttca 441
                 ||||| |||||||| || ||||||||  | |||||||||||||||||||||||||||||
Sbjct: 29133003 gtcaagttgtgataaatccactatttctccgtccaaccctgccgatctatatgatgttca 29133062

                   
Query: 442      tgt 444
                |||
Sbjct: 29133063 tgt 29133065



 Score =  101 bits (51), Expect = 3e-18
 Identities = 57/59 (96%)
 Strand = Plus / Plus

                                                                           
Query: 21       tcaatgatgcctggggatactggactgacgatggactcggattctttgagttccttcag 79
                |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 29132094 tcaatgatgcctggggatactggactgatgatggacttggattctttgagttccttcag 29132152



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 65/72 (90%)
 Strand = Plus / Plus

                                                                            
Query: 513      aggcaattgttagcgagtacgccgtgactggaaacgacgctggcaaaggaacactggtag 572
                |||||||||| || |||||||| ||||||||||| || ||||||||||||||||||||||
Sbjct: 29133334 aggcaattgtaagtgagtacgctgtgactggaaaggatgctggcaaaggaacactggtag 29133393

                            
Query: 573      cagcactcgcag 584
                 |||||| ||||
Sbjct: 29133394 aagcactagcag 29133405



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                               
Query: 462      atatgttttccagaactagtatgtttgacaa 492
                |||||||||||||||||||||||||||||||
Sbjct: 29133190 atatgttttccagaactagtatgtttgacaa 29133220



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                              
Query: 81       tagctgaagaccttggtgcttcccctgtttgggtggtgaatgatgg 126
                ||||||||||||| |||||||| || || |||||||| ||||||||
Sbjct: 29132239 tagctgaagacctcggtgcttcgccagtatgggtggtcaatgatgg 29132284



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>dbj|AP003813.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1150_E04
          Length = 130973

 Score =  174 bits (88), Expect = 2e-40
 Identities = 127/140 (90%)
 Strand = Plus / Plus

                                                                         
Query: 185   gttgatggtatcgagtttgcaaggggaggggtcaacactacatggggttcagttcgtgcg 244
             |||||||| ||||||||||| |||||||||  ||| ||||||||||||||||||||||| 
Sbjct: 67638 gttgatggcatcgagtttgccaggggagggcccaagactacatggggttcagttcgtgca 67697

                                                                         
Query: 245   gcaatggggcatcctcagccctttaagcttgattatgtttcaatagggaatcaagaatgc 304
             || ||||| ||||| || |||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 67698 gcgatgggtcatccacaaccctttaaccttgactatgtttcaatagggaatcaagaatgc 67757

                                 
Query: 305   tggatgctctactacagagg 324
             ||||||||||| ||||||||
Sbjct: 67758 tggatgctctattacagagg 67777



 Score =  125 bits (63), Expect = 2e-25
 Identities = 108/123 (87%)
 Strand = Plus / Plus

                                                                         
Query: 322   aggcaattaccgaaagttctattctgcgattaaagctgcctacccagacatcaatattat 381
             ||||||||||| ||| |||||||| ||||||||||||||||| |||||||||||  |  |
Sbjct: 68061 aggcaattaccaaaaattctattccgcgattaaagctgcctatccagacatcaacgtcgt 68120

                                                                         
Query: 382   atcaagctgtgataagtcaactatttcggcatccaaccctgccgatctatatgatgttca 441
              ||||| |||||||| || ||||||||  | |||||||||||||||||||||||||||||
Sbjct: 68121 gtcaagttgtgataaatccactatttctccgtccaaccctgccgatctatatgatgttca 68180

                
Query: 442   tgt 444
             |||
Sbjct: 68181 tgt 68183



 Score =  101 bits (51), Expect = 3e-18
 Identities = 57/59 (96%)
 Strand = Plus / Plus

                                                                        
Query: 21    tcaatgatgcctggggatactggactgacgatggactcggattctttgagttccttcag 79
             |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 67212 tcaatgatgcctggggatactggactgatgatggacttggattctttgagttccttcag 67270



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 65/72 (90%)
 Strand = Plus / Plus

                                                                         
Query: 513   aggcaattgttagcgagtacgccgtgactggaaacgacgctggcaaaggaacactggtag 572
             |||||||||| || |||||||| ||||||||||| || ||||||||||||||||||||||
Sbjct: 68452 aggcaattgtaagtgagtacgctgtgactggaaaggatgctggcaaaggaacactggtag 68511

                         
Query: 573   cagcactcgcag 584
              |||||| ||||
Sbjct: 68512 aagcactagcag 68523



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                            
Query: 462   atatgttttccagaactagtatgtttgacaa 492
             |||||||||||||||||||||||||||||||
Sbjct: 68308 atatgttttccagaactagtatgtttgacaa 68338



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                           
Query: 81    tagctgaagaccttggtgcttcccctgtttgggtggtgaatgatgg 126
             ||||||||||||| |||||||| || || |||||||| ||||||||
Sbjct: 67357 tagctgaagacctcggtgcttcgccagtatgggtggtcaatgatgg 67402



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>dbj|AP003818.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1200_C08
          Length = 106214

 Score =  174 bits (88), Expect = 2e-40
 Identities = 127/140 (90%)
 Strand = Plus / Plus

                                                                         
Query: 185   gttgatggtatcgagtttgcaaggggaggggtcaacactacatggggttcagttcgtgcg 244
             |||||||| ||||||||||| |||||||||  ||| ||||||||||||||||||||||| 
Sbjct: 80477 gttgatggcatcgagtttgccaggggagggcccaagactacatggggttcagttcgtgca 80536

                                                                         
Query: 245   gcaatggggcatcctcagccctttaagcttgattatgtttcaatagggaatcaagaatgc 304
             || ||||| ||||| || |||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 80537 gcgatgggtcatccacaaccctttaaccttgactatgtttcaatagggaatcaagaatgc 80596

                                 
Query: 305   tggatgctctactacagagg 324
             ||||||||||| ||||||||
Sbjct: 80597 tggatgctctattacagagg 80616



 Score =  125 bits (63), Expect = 2e-25
 Identities = 108/123 (87%)
 Strand = Plus / Plus

                                                                         
Query: 322   aggcaattaccgaaagttctattctgcgattaaagctgcctacccagacatcaatattat 381
             ||||||||||| ||| |||||||| ||||||||||||||||| |||||||||||  |  |
Sbjct: 80900 aggcaattaccaaaaattctattccgcgattaaagctgcctatccagacatcaacgtcgt 80959

                                                                         
Query: 382   atcaagctgtgataagtcaactatttcggcatccaaccctgccgatctatatgatgttca 441
              ||||| |||||||| || ||||||||  | |||||||||||||||||||||||||||||
Sbjct: 80960 gtcaagttgtgataaatccactatttctccgtccaaccctgccgatctatatgatgttca 81019

                
Query: 442   tgt 444
             |||
Sbjct: 81020 tgt 81022



 Score =  101 bits (51), Expect = 3e-18
 Identities = 57/59 (96%)
 Strand = Plus / Plus

                                                                        
Query: 21    tcaatgatgcctggggatactggactgacgatggactcggattctttgagttccttcag 79
             |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 80051 tcaatgatgcctggggatactggactgatgatggacttggattctttgagttccttcag 80109



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 65/72 (90%)
 Strand = Plus / Plus

                                                                         
Query: 513   aggcaattgttagcgagtacgccgtgactggaaacgacgctggcaaaggaacactggtag 572
             |||||||||| || |||||||| ||||||||||| || ||||||||||||||||||||||
Sbjct: 81291 aggcaattgtaagtgagtacgctgtgactggaaaggatgctggcaaaggaacactggtag 81350

                         
Query: 573   cagcactcgcag 584
              |||||| ||||
Sbjct: 81351 aagcactagcag 81362



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 31/31 (100%)
 Strand = Plus / Plus

                                            
Query: 462   atatgttttccagaactagtatgtttgacaa 492
             |||||||||||||||||||||||||||||||
Sbjct: 81147 atatgttttccagaactagtatgtttgacaa 81177



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                           
Query: 81    tagctgaagaccttggtgcttcccctgtttgggtggtgaatgatgg 126
             ||||||||||||| |||||||| || || |||||||| ||||||||
Sbjct: 80196 tagctgaagacctcggtgcttcgccagtatgggtggtcaatgatgg 80241



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>dbj|AK062471.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-103-E11, full
           insert sequence
          Length = 1212

 Score =  127 bits (64), Expect = 4e-26
 Identities = 169/204 (82%)
 Strand = Plus / Plus

                                                                       
Query: 362 tacccagacatcaatattatatcaagctgtgataagtcaactatttcggcatccaaccct 421
           ||||| |||||||| ||||||||||||||||| |  ||  | ||||| |||  |||||||
Sbjct: 18  tacccggacatcaaaattatatcaagctgtgacatatcttccatttcagcagtcaaccct 77

                                                                       
Query: 422 gccgatctatatgatgttcatgtctatgcatcttctgctaatatgttttccagaactagt 481
           || |||||||||||||| ||||| ||| |||| |||| | |||||||||||| ||| || 
Sbjct: 78  gctgatctatatgatgtccatgtttatacatcatctggtgatatgttttccaaaacaaga 137

                                                                       
Query: 482 atgtttgacaacacaccacgcagcggacctaaggcaattgttagcgagtacgccgtgact 541
           |||||||| | |||||| ||||| ||||| |||||| ||||||| || || || ||||||
Sbjct: 138 atgtttgatagcacaccccgcagtggacccaaggcatttgttagtgaatatgcggtgact 197

                                   
Query: 542 ggaaacgacgctggcaaaggaaca 565
           ||||| || ||||||  |||||||
Sbjct: 198 ggaaatgatgctggccgaggaaca 221



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  105 bits (53), Expect = 2e-19
 Identities = 110/129 (85%)
 Strand = Plus / Minus

                                                                            
Query: 177      aggatgttgttgatggtatcgagtttgcaaggggaggggtcaacactacatggggttcag 236
                |||| ||||||||||| || |||||||| |||||||     || ||||||||||||||||
Sbjct: 11525241 aggacgttgttgatggcattgagtttgctaggggagaccctaagactacatggggttcag 11525182

                                                                            
Query: 237      ttcgtgcggcaatggggcatcctcagccctttaagcttgattatgtttcaatagggaatc 296
                ||||||| |||||||| |||||  ||||||||  |||| ||||| ||||| |||||||||
Sbjct: 11525181 ttcgtgcagcaatgggacatccagagccctttccgctttattatatttcagtagggaatc 11525122

                         
Query: 297      aagaatgct 305
                |||||||||
Sbjct: 11525121 aagaatgct 11525113



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 92/110 (83%)
 Strand = Plus / Minus

                                                                            
Query: 335      aagttctattctgcgattaaagctgcctacccagacatcaatattatatcaagctgtgat 394
                |||||||||||||| || |||||  | ||||| |||||||| ||||||||||||||||| 
Sbjct: 11524997 aagttctattctgcaataaaagcgtcttacccggacatcaaaattatatcaagctgtgac 11524938

                                                                  
Query: 395      aagtcaactatttcggcatccaaccctgccgatctatatgatgttcatgt 444
                |  ||  | ||||| |||  ||||||||| |||||||||||||| |||||
Sbjct: 11524937 atatcttccatttcagcagtcaaccctgctgatctatatgatgtccatgt 11524888



 Score = 44.1 bits (22), Expect = 0.51
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                      
Query: 41       tggactgacgatggactcggattctttgagttccttca 78
                |||||||| |||||||| || || ||||||||||||||
Sbjct: 11526093 tggactgatgatggactaggcttttttgagttccttca 11526056



 Score = 44.1 bits (22), Expect = 0.51
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                      
Query: 462      atatgttttccagaactagtatgtttgacaacacaccacgcagcggacctaagg 515
                |||||||||||| ||| || |||||||| | |||||| ||||| ||||| ||||
Sbjct: 11524777 atatgttttccaaaacaagaatgtttgatagcacaccccgcagtggacccaagg 11524724



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>gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0042L15, from chromosome 3, complete sequence
          Length = 172475

 Score =  105 bits (53), Expect = 2e-19
 Identities = 110/129 (85%)
 Strand = Plus / Minus

                                                                         
Query: 177   aggatgttgttgatggtatcgagtttgcaaggggaggggtcaacactacatggggttcag 236
             |||| ||||||||||| || |||||||| |||||||     || ||||||||||||||||
Sbjct: 75813 aggacgttgttgatggcattgagtttgctaggggagaccctaagactacatggggttcag 75754

                                                                         
Query: 237   ttcgtgcggcaatggggcatcctcagccctttaagcttgattatgtttcaatagggaatc 296
             ||||||| |||||||| |||||  ||||||||  |||| ||||| ||||| |||||||||
Sbjct: 75753 ttcgtgcagcaatgggacatccagagccctttccgctttattatatttcagtagggaatc 75694

                      
Query: 297   aagaatgct 305
             |||||||||
Sbjct: 75693 aagaatgct 75685



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 92/110 (83%)
 Strand = Plus / Minus

                                                                         
Query: 335   aagttctattctgcgattaaagctgcctacccagacatcaatattatatcaagctgtgat 394
             |||||||||||||| || |||||  | ||||| |||||||| ||||||||||||||||| 
Sbjct: 75569 aagttctattctgcaataaaagcgtcttacccggacatcaaaattatatcaagctgtgac 75510

                                                               
Query: 395   aagtcaactatttcggcatccaaccctgccgatctatatgatgttcatgt 444
             |  ||  | ||||| |||  ||||||||| |||||||||||||| |||||
Sbjct: 75509 atatcttccatttcagcagtcaaccctgctgatctatatgatgtccatgt 75460



 Score = 44.1 bits (22), Expect = 0.51
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 41    tggactgacgatggactcggattctttgagttccttca 78
             |||||||| |||||||| || || ||||||||||||||
Sbjct: 76665 tggactgatgatggactaggcttttttgagttccttca 76628



 Score = 44.1 bits (22), Expect = 0.51
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                   
Query: 462   atatgttttccagaactagtatgtttgacaacacaccacgcagcggacctaagg 515
             |||||||||||| ||| || |||||||| | |||||| ||||| ||||| ||||
Sbjct: 75349 atatgttttccaaaacaagaatgtttgatagcacaccccgcagtggacccaagg 75296



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  105 bits (53), Expect = 2e-19
 Identities = 110/129 (85%)
 Strand = Plus / Minus

                                                                            
Query: 177      aggatgttgttgatggtatcgagtttgcaaggggaggggtcaacactacatggggttcag 236
                |||| ||||||||||| || |||||||| |||||||     || ||||||||||||||||
Sbjct: 11522004 aggacgttgttgatggcattgagtttgctaggggagaccctaagactacatggggttcag 11521945

                                                                            
Query: 237      ttcgtgcggcaatggggcatcctcagccctttaagcttgattatgtttcaatagggaatc 296
                ||||||| |||||||| |||||  ||||||||  |||| ||||| ||||| |||||||||
Sbjct: 11521944 ttcgtgcagcaatgggacatccagagccctttccgctttattatatttcagtagggaatc 11521885

                         
Query: 297      aagaatgct 305
                |||||||||
Sbjct: 11521884 aagaatgct 11521876



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 92/110 (83%)
 Strand = Plus / Minus

                                                                            
Query: 335      aagttctattctgcgattaaagctgcctacccagacatcaatattatatcaagctgtgat 394
                |||||||||||||| || |||||  | ||||| |||||||| ||||||||||||||||| 
Sbjct: 11521760 aagttctattctgcaataaaagcgtcttacccggacatcaaaattatatcaagctgtgac 11521701

                                                                  
Query: 395      aagtcaactatttcggcatccaaccctgccgatctatatgatgttcatgt 444
                |  ||  | ||||| |||  ||||||||| |||||||||||||| |||||
Sbjct: 11521700 atatcttccatttcagcagtcaaccctgctgatctatatgatgtccatgt 11521651



 Score = 44.1 bits (22), Expect = 0.51
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                      
Query: 41       tggactgacgatggactcggattctttgagttccttca 78
                |||||||| |||||||| || || ||||||||||||||
Sbjct: 11522856 tggactgatgatggactaggcttttttgagttccttca 11522819



 Score = 44.1 bits (22), Expect = 0.51
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                      
Query: 462      atatgttttccagaactagtatgtttgacaacacaccacgcagcggacctaagg 515
                |||||||||||| ||| || |||||||| | |||||| ||||| ||||| ||||
Sbjct: 11521540 atatgttttccaaaacaagaatgtttgatagcacaccccgcagtggacccaagg 11521487



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>gb|AF320324.1|AF320324 Hordeum vulgare arabinoxylan arabinofuranohydrolase isoenzyme
           AXAH-I mRNA, complete cds
          Length = 2068

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Plus

                                                                       
Query: 38  tactggactgacgatggactcggattctttgagttccttcagttagctgaagaccttggt 97
           |||||||| || ||||| |||||||  | |||||| |||||| | |||||||||||||||
Sbjct: 910 tactggacggatgatggcctcggatattatgagtttcttcagcttgctgaagaccttggt 969

                            
Query: 98  gcttcccctgtttgggt 114
           ||| |||| || |||||
Sbjct: 970 gctgccccagtctgggt 986



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                         
Query: 519  ttgttagcgagtacgccgtgactggaaacgacgctggcaaaggaa 563
            ||||||||||||| || || || ||||||||||| |||| |||||
Sbjct: 1391 ttgttagcgagtatgctgttacaggaaacgacgcaggcagaggaa 1435



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                
Query: 224  acatggggttcagttcgtgcggcaatggggcatcct 259
            ||||||||||| ||| | || |||||||||||||||
Sbjct: 1096 acatggggttctgttagagctgcaatggggcatcct 1131



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>gb|AF429985.1|AF429985 Lycopersicon esculentum arabinosidase ARA-1 mRNA, complete cds
          Length = 2113

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 57/67 (85%)
 Strand = Plus / Plus

                                                                        
Query: 495  caccacgcagcggacctaaggcaattgttagcgagtacgccgtgactggaaacgacgctg 554
            |||||||||| ||||| |||||  |||| || ||||| |||||||||||||| || ||||
Sbjct: 1359 caccacgcagaggaccaaaggcttttgtgagtgagtatgccgtgactggaaatgatgctg 1418

                   
Query: 555  gcaaagg 561
            | |||||
Sbjct: 1419 gaaaagg 1425



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>dbj|AB073310.1| Lycopersicon esculentum LeARF1 mRNA for alpha-L-arabinofuranosidase,
            complete cds
          Length = 2147

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 57/67 (85%)
 Strand = Plus / Plus

                                                                        
Query: 495  caccacgcagcggacctaaggcaattgttagcgagtacgccgtgactggaaacgacgctg 554
            |||||||||| ||||| |||||  |||| || ||||| |||||||||||||| || ||||
Sbjct: 1396 caccacgcagaggaccaaaggcttttgtgagtgagtatgccgtgactggaaatgatgctg 1455

                   
Query: 555  gcaaagg 561
            | |||||
Sbjct: 1456 gaaaagg 1462



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>gb|AC137839.19| Medicago truncatula clone mth2-34j11, complete sequence
          Length = 145073

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 429    tatatgatgttcatgtctatg 449
              |||||||||||||||||||||
Sbjct: 134074 tatatgatgttcatgtctatg 134054



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>gb|AC147483.13| Medicago truncatula clone mth2-22o7, complete sequence
          Length = 142205

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 429  tatatgatgttcatgtctatg 449
            |||||||||||||||||||||
Sbjct: 8136 tatatgatgttcatgtctatg 8156



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>gb|AY309436.1| Malus x domestica alpha-L-arabinofuranosidase (AFase1) mRNA, complete
            cds
          Length = 2489

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                 
Query: 519  ttgttagcgagtacgccgtgactggaaacgacgctgg 555
            |||| |||||||| |||||||||||||| || |||||
Sbjct: 1563 ttgtgagcgagtatgccgtgactggaaaagatgctgg 1599



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 38   tactggactgacgatggact 57
            ||||||||||||||||||||
Sbjct: 1082 tactggactgacgatggact 1101



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>gb|AC148241.21| Medicago truncatula clone mth2-14m21, complete sequence
          Length = 119208

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 429    tatatgatgttcatgtctatg 449
              |||||||||||||||||||||
Sbjct: 102910 tatatgatgttcatgtctatg 102930



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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                
Query: 83      gctgaagaccttggtgcttcccctgtttgggtg 115
               ||||||||||| |||||| ||||| ||||||||
Sbjct: 1400323 gctgaagacctgggtgctgcccctatttgggtg 1400355



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>dbj|AB073311.1| Pyrus pyrifolia PPARF1 mRNA for alpha-L-arabinofuranosidase, complete
            cds
          Length = 2345

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                 
Query: 519  ttgttagcgagtacgccgtgactggaaacgacgctgg 555
            |||| |||||||| |||||||||||||| || |||||
Sbjct: 1584 ttgtgagcgagtatgccgtgactggaaaagatgctgg 1620



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                         
Query: 224  acatggggttcagttcgtgcggcaatggggcatcctcagcccttt 268
            |||||||||||  ||||||| |||||||| |||||  ||||||||
Sbjct: 1289 acatggggttctcttcgtgctgcaatgggacatcccgagcccttt 1333



 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 38   tactggactgacgatggact 57
            ||||||||||||||||||||
Sbjct: 1103 tactggactgacgatggact 1122



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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                
Query: 83      gctgaagaccttggtgcttcccctgtttgggtg 115
               ||||||||||| |||||| ||||| ||||||||
Sbjct: 1400323 gctgaagacctgggtgctgcccctatttgggtg 1400355



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>emb|BX000507.2|CNS08CDX Oryza sativa chromosome 12, . BAC OJ1003_C01 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 157453

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 83    gctgaagaccttggtgcttcccctgtttgggtg 115
             ||||||||||| |||||| ||||| ||||||||
Sbjct: 28846 gctgaagacctgggtgctgcccctatttgggtg 28814



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>gb|AC119671.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0084F23, complete sequence
          Length = 89829

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 430   atatgatgttcatgtctatgcatc 453
             ||||||||||||| ||||||||||
Sbjct: 34678 atatgatgttcatttctatgcatc 34655



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>ref|XM_362783.1| Magnaporthe grisea 70-15 hypothetical protein (MG08265.4) partial
            mRNA
          Length = 1779

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 202  tgcaaggggaggggtcaacactacatgg 229
            |||||||||||||| ||||||| |||||
Sbjct: 1743 tgcaaggggagggggcaacactgcatgg 1770



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>gb|AY294068.1| Pinus monticola putative NBS-LRR protein G8506 (RGA) gene, partial
           sequence
          Length = 491

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 544 aaacgacgctggcaaaggaa 563
           ||||||||||||||||||||
Sbjct: 14  aaacgacgctggcaaaggaa 33



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>gb|AY294065.1| Pinus monticola putative NBS-LRR protein G8502 (RGA) gene, partial
           sequence
          Length = 491

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 544 aaacgacgctggcaaaggaa 563
           ||||||||||||||||||||
Sbjct: 14  aaacgacgctggcaaaggaa 33



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>gb|CP000053.1| Rickettsia felis URRWXCal2, complete genome
          Length = 1485148

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 129     caagcattaacgaagaagtt 148
               ||||||||||||||||||||
Sbjct: 1232273 caagcattaacgaagaagtt 1232254



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>gb|AF320325.1|AF320325 Hordeum vulgare arabinoxylan arabinofuranohydrolase isoenzyme AXAH-II
            mRNA, complete cds
          Length = 2451

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 47/56 (83%)
 Strand = Plus / Plus

                                                                    
Query: 38   tactggactgacgatggactcggattctttgagttccttcagttagctgaagacct 93
            ||||||||||||||||| || ||||  | |||||| |||||| |  ||||||||||
Sbjct: 1148 tactggactgacgatggccttggatattatgagtttcttcagctttctgaagacct 1203



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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 430     atatgatgttcatgtctatgcatc 453
               ||||||||||||| ||||||||||
Sbjct: 7523423 atatgatgttcatttctatgcatc 7523446



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>dbj|AB193032.1| Corynebacterium glutamicum DNA, strain specific island 5, strain: R
          Length = 32840

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 57   tcggattctttgagttcctt 76
            ||||||||||||||||||||
Sbjct: 5349 tcggattctttgagttcctt 5368



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>gb|AC005035.2| Homo sapiens BAC clone RP11-353P23 from 2, complete sequence
          Length = 193708

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 340   ctattctgcgattaaagctg 359
             ||||||||||||||||||||
Sbjct: 28368 ctattctgcgattaaagctg 28349



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>gb|AC010873.12| Homo sapiens BAC clone RP11-112N16 from 2, complete sequence
          Length = 180602

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 59     ggattctttgagttccttca 78
              ||||||||||||||||||||
Sbjct: 179266 ggattctttgagttccttca 179247



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>dbj|AK098954.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013062A02, full
            insert sequence
          Length = 3183

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 430  atatgatgttcatgtctatgcatc 453
            ||||||||||||| ||||||||||
Sbjct: 1832 atatgatgttcatttctatgcatc 1855



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>gb|AY106254.1| Zea mays PCO073074 mRNA sequence
          Length = 2589

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 56/68 (82%)
 Strand = Plus / Plus

                                                                        
Query: 38   tactggactgacgatggactcggattctttgagttccttcagttagctgaagaccttggt 97
            ||||||||||| ||||| || ||||  | ||||||||||||| | || || ||||| |||
Sbjct: 1270 tactggactgatgatgggcttggatattatgagttccttcagcttgcggaggacctgggt 1329

                    
Query: 98   gcttcccc 105
            ||| ||||
Sbjct: 1330 gctgcccc 1337



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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 430     atatgatgttcatgtctatgcatc 453
               ||||||||||||| ||||||||||
Sbjct: 7593509 atatgatgttcatttctatgcatc 7593532



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>emb|AL845320.10| Zebrafish DNA sequence from clone DKEY-30J19, complete sequence
          Length = 183417

 Score = 40.1 bits (20), Expect = 7.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 271    gcttgattatgtttcaatag 290
              ||||||||||||||||||||
Sbjct: 124466 gcttgattatgtttcaatag 124485


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,521,568
Number of Sequences: 3902068
Number of extensions: 4521568
Number of successful extensions: 76217
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 75926
Number of HSP's gapped (non-prelim): 280
length of query: 584
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 561
effective length of database: 17,143,297,704
effective search space: 9617390011944
effective search space used: 9617390011944
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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