>dbj|AK065189.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002E07, full
           insert sequence
          Length = 1749

 Score =  167 bits (84), Expect = 2e-38
 Identities = 123/136 (90%)
 Strand = Plus / Plus

                                                                       
Query: 1   gcccgctgctctgcccgctggggctctacgccgagcagctctccggcacctccttcacca 60
           |||||||| ||||||||||||| ||||||||||||||||||||||||||  |||||||| 
Sbjct: 219 gcccgctggtctgcccgctgggactctacgccgagcagctctccggcacgcccttcaccg 278

                                                                       
Query: 61  ccccgcgccaccgcaaccagcgaacgtggatgtaccggatcaagccgtcggtgacccacg 120
           ||||||||  ||||||||  ||||| ||| |||||||||||||||| |||||||||||||
Sbjct: 279 ccccgcgcgcccgcaacctccgaacatggctgtaccggatcaagccttcggtgacccacg 338

                           
Query: 121 accccttccacccccg 136
           | ||||||||||||||
Sbjct: 339 agcccttccacccccg 354

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
              complete sequence
          Length = 30731886

 Score =  101 bits (51), Expect = 9e-19
 Identities = 78/87 (89%)
 Strand = Plus / Minus

                                                                          
Query: 1      gcccgctgctctgcccgctggggctctacgccgagcagctctccggcacctccttcacca 60
              |||||||| ||||||||||||| ||||||||||||||||||||||||||  |||||||| 
Sbjct: 216799 gcccgctggtctgcccgctgggactctacgccgagcagctctccggcacgcccttcaccg 216740

                                         
Query: 61     ccccgcgccaccgcaaccagcgaacgt 87
              ||||||||  ||||||||  |||||||
Sbjct: 216739 ccccgcgcgcccgcaacctccgaacgt 216713



 Score = 75.8 bits (38), Expect = 5e-11
 Identities = 44/46 (95%)
 Strand = Plus / Minus

                                                            
Query: 91     tgtaccggatcaagccgtcggtgacccacgaccccttccacccccg 136
              |||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 216641 tgtaccggatcaagccttcggtgacccacgagcccttccacccccg 216596

>dbj|AP002842.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0075G19
          Length = 163558

 Score =  101 bits (51), Expect = 9e-19
 Identities = 78/87 (89%)
 Strand = Plus / Minus

                                                                         
Query: 1     gcccgctgctctgcccgctggggctctacgccgagcagctctccggcacctccttcacca 60
             |||||||| ||||||||||||| ||||||||||||||||||||||||||  |||||||| 
Sbjct: 81695 gcccgctggtctgcccgctgggactctacgccgagcagctctccggcacgcccttcaccg 81636

                                        
Query: 61    ccccgcgccaccgcaaccagcgaacgt 87
             ||||||||  ||||||||  |||||||
Sbjct: 81635 ccccgcgcgcccgcaacctccgaacgt 81609



 Score = 75.8 bits (38), Expect = 5e-11
 Identities = 44/46 (95%)
 Strand = Plus / Minus

                                                           
Query: 91    tgtaccggatcaagccgtcggtgacccacgaccccttccacccccg 136
             |||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 81537 tgtaccggatcaagccttcggtgacccacgagcccttccacccccg 81492

>dbj|AP005621.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
            clone:P0681G01, complete sequence
          Length = 184118

 Score =  101 bits (51), Expect = 9e-19
 Identities = 78/87 (89%)
 Strand = Plus / Plus

                                                                        
Query: 1    gcccgctgctctgcccgctggggctctacgccgagcagctctccggcacctccttcacca 60
            |||||||| ||||||||||||| ||||||||||||||||||||||||||  |||||||| 
Sbjct: 3743 gcccgctggtctgcccgctgggactctacgccgagcagctctccggcacgcccttcaccg 3802

                                       
Query: 61   ccccgcgccaccgcaaccagcgaacgt 87
            ||||||||  ||||||||  |||||||
Sbjct: 3803 ccccgcgcgcccgcaacctccgaacgt 3829



 Score = 75.8 bits (38), Expect = 5e-11
 Identities = 44/46 (95%)
 Strand = Plus / Plus

                                                          
Query: 91   tgtaccggatcaagccgtcggtgacccacgaccccttccacccccg 136
            |||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 3901 tgtaccggatcaagccttcggtgacccacgagcccttccacccccg 3946

>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 67/81 (82%)
 Strand = Plus / Minus

                                                                           
Query: 21      gggctctacgccgagcagctctccggcacctccttcaccaccccgcgccaccgcaaccag 80
               ||||||||||| |||||| ||||||||||| | |||||| | ||||||  || |||||  
Sbjct: 2155928 gggctctacgcggagcagttctccggcaccgcgttcaccgcgccgcgcggccacaaccgc 2155869

                                    
Query: 81      cgaacgtggatgtaccggatc 101
               ||  ||||| |||||||||||
Sbjct: 2155868 cgctcgtggctgtaccggatc 2155848

>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 67/81 (82%)
 Strand = Plus / Minus

                                                                           
Query: 21      gggctctacgccgagcagctctccggcacctccttcaccaccccgcgccaccgcaaccag 80
               ||||||||||| |||||| ||||||||||| | |||||| | ||||||  || |||||  
Sbjct: 3540634 gggctctacgcggagcagttctccggcaccgcgttcaccgcgccgcgcggccacaaccgc 3540575

                                    
Query: 81      cgaacgtggatgtaccggatc 101
               ||  ||||| |||||||||||
Sbjct: 3540574 cgctcgtggctgtaccggatc 3540554

>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 67/81 (82%)
 Strand = Plus / Minus

                                                                           
Query: 21      gggctctacgccgagcagctctccggcacctccttcaccaccccgcgccaccgcaaccag 80
               ||||||||||| |||||| ||||||||||| | |||||| | ||||||  || |||||  
Sbjct: 3281930 gggctctacgcggagcagttctccggcaccgcgttcaccgcgccgcgcggccacaaccgc 3281871

                                    
Query: 81      cgaacgtggatgtaccggatc 101
               ||  ||||| |||||||||||
Sbjct: 3281870 cgctcgtggctgtaccggatc 3281850

>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 48.1 bits (24), Expect = 0.011
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                           
Query: 84      acgtggatgtaccggatcaagccgtcgg 111
               |||||||||||||||||| |||||||||
Sbjct: 1060457 acgtggatgtaccggatccagccgtcgg 1060484

>gb|CP000264.1| Jannaschia sp. CCS1, complete genome
          Length = 4317977

 Score = 48.1 bits (24), Expect = 0.011
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                   
Query: 24      ctctacgccgagcagctctccggcacctccttcacc 59
               ||||||| ||| ||||||||||||||| ||||||||
Sbjct: 1407552 ctctacggcgaacagctctccggcaccgccttcacc 1407517

>dbj|AP006146.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT34M22, TM0282,
             complete sequence
          Length = 107979

 Score = 46.1 bits (23), Expect = 0.045
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 24    ctctacgccgagcagctctccggcacctccttcac 58
             ||||||||||||||  ||||||||||||| |||||
Sbjct: 62008 ctctacgccgagcaaatctccggcacctcattcac 61974

>emb|BX640439.1| Bordetella bronchiseptica strain RB50, complete genome; segment 3/16
          Length = 346362

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                        
Query: 27     tacgccgagcagctctccggcacctccttcaccaccccgcgc 68
              ||||||||||| || ||||||||  |||||||| ||||||||
Sbjct: 257716 tacgccgagcaactgtccggcacggccttcaccgccccgcgc 257675

>emb|BX640425.1| Bordetella parapertussis strain 12822, complete genome; segment 3/14
          Length = 348257

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                        
Query: 27     tacgccgagcagctctccggcacctccttcaccaccccgcgc 68
              ||||||||||| || ||||||||  |||||||| ||||||||
Sbjct: 171725 tacgccgagcaactgtccggcacggccttcaccgccccgcgc 171684

>emb|BX640420.1| Bordetella pertussis strain Tohama I, complete genome; segment 10/12
          Length = 348134

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                        
Query: 27     tacgccgagcagctctccggcacctccttcaccaccccgcgc 68
              ||||||||||| || ||||||||  |||||||| ||||||||
Sbjct: 208378 tacgccgagcaactgtccggcacggccttcaccgccccgcgc 208419

>gb|AE004627.1| Pseudomonas aeruginosa PAO1, section 188 of 529 of the complete
            genome
          Length = 12776

 Score = 44.1 bits (22), Expect = 0.18
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                              
Query: 27   tacgccgagcagctctccggcacctccttcacca 60
            |||||||| | ||||||||||||| |||||||||
Sbjct: 6225 tacgccgaactgctctccggcaccgccttcacca 6192

>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome
          Length = 2364842

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 114     acccacgaccccttccacccc 134
               |||||||||||||||||||||
Sbjct: 2158085 acccacgaccccttccacccc 2158105

>ref|XM_751776.1| Ustilago maydis 521 hypothetical protein (UM00722.1) partial mRNA
          Length = 2136

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 41   ctccggcacctccttcaccac 61
            |||||||||||||||||||||
Sbjct: 1555 ctccggcacctccttcaccac 1535

>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                               
Query: 27     tacgccgagcagctctccggcacctccttcacc 59
              |||||||||||| | ||||||||| ||||||||
Sbjct: 548686 tacgccgagcagttgtccggcaccgccttcacc 548718

>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 21      gggctctacgccgagcagctc 41
               |||||||||||||||||||||
Sbjct: 2694657 gggctctacgccgagcagctc 2694677

>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                
Query: 27      tacgccgagcagctctccggcacctccttcacc 59
               |||||||||||| | ||||||||| ||||||||
Sbjct: 4349700 tacgccgagcagttgtccggcaccgccttcacc 4349668

>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 42.1 bits (21), Expect = 0.71
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                
Query: 27      tacgccgagcagctctccggcacctccttcacc 59
               |||||||||||| | ||||||||| ||||||||
Sbjct: 4356534 tacgccgagcagttgtccggcaccgccttcacc 4356502

>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 43     ccggcacctccttcaccacc 62
              ||||||||||||||||||||
Sbjct: 959773 ccggcacctccttcaccacc 959754

>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 2.8
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                               
Query: 21      gggctctacgccgagcagctctccggcacctccttcaccaccccgcgc 68
               ||||||||||| |||||| | ||||||||| | |||||| | ||||||
Sbjct: 1571345 gggctctacgcggagcagttgtccggcaccgcgttcaccgcgccgcgc 1571392


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 905,535
Number of Sequences: 3902068
Number of extensions: 905535
Number of successful extensions: 64022
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 63339
Number of HSP's gapped (non-prelim): 680
length of query: 220
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 198
effective length of database: 17,147,199,772
effective search space: 3395145554856
effective search space used: 3395145554856
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)