ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | basd22o08 |
|---|---|
| Clone Library Name | barley_pub |
>TAS_SHIFL (P0A9T5) Protein tas| Length = 346 Score = 70.1 bits (170), Expect = 2e-12 Identities = 32/55 (58%), Positives = 42/55 (76%) Frame = +2 Query: 272 LQYKKLGDSDLLVSEITLGTMTFGEQNTEKEAHDMLSYSLDQGINILDTAEMYPV 436 +QY ++ S L VS + LGTMTFGEQN+E +AH L Y++ QGIN++D AEMYPV Sbjct: 1 MQYHRIPHSSLEVSTLGLGTMTFGEQNSEADAHAQLDYAVAQGINLIDVAEMYPV 55
>TAS_ECOLI (P0A9T4) Protein tas| Length = 346 Score = 70.1 bits (170), Expect = 2e-12 Identities = 32/55 (58%), Positives = 42/55 (76%) Frame = +2 Query: 272 LQYKKLGDSDLLVSEITLGTMTFGEQNTEKEAHDMLSYSLDQGINILDTAEMYPV 436 +QY ++ S L VS + LGTMTFGEQN+E +AH L Y++ QGIN++D AEMYPV Sbjct: 1 MQYHRIPHSSLEVSTLGLGTMTFGEQNSEADAHAQLDYAVAQGINLIDVAEMYPV 55
>KCAB3_RAT (Q63494) Voltage-gated potassium channel beta-3 subunit (K(+)| channel beta-3 subunit) (Kv-beta-3) (RCK beta3) Length = 404 Score = 52.8 bits (125), Expect = 4e-07 Identities = 25/55 (45%), Positives = 40/55 (72%), Gaps = 1/55 (1%) Frame = +2 Query: 269 GLQYKKLGDSDLLVSEITLGT-MTFGEQNTEKEAHDMLSYSLDQGINILDTAEMY 430 G++Y+ LG S L VS + LGT +TFG Q +++ A D+L+ + + G+N+ DTAE+Y Sbjct: 77 GMKYRNLGKSGLRVSCLGLGTWVTFGSQISDETAEDLLTVAYEHGVNLFDTAEVY 131
>KCAB1_MUSPU (Q28528) Voltage-gated potassium channel beta-1 subunit (K(+)| channel beta-1 subunit) (Kv-beta-1) Length = 408 Score = 50.1 bits (118), Expect = 2e-06 Identities = 25/63 (39%), Positives = 42/63 (66%), Gaps = 1/63 (1%) Frame = +2 Query: 245 QVRAQAQDGLQYKKLGDSDLLVSEITLGT-MTFGEQNTEKEAHDMLSYSLDQGINILDTA 421 Q +A+ G+ Y+ LG S L VS + LGT +TFG Q +++ A +++ + + G+N+ DTA Sbjct: 69 QETTRAETGMAYRNLGKSGLRVSCLGLGTWVTFGGQISDEVAERLMTIAYESGVNLFDTA 128 Query: 422 EMY 430 E+Y Sbjct: 129 EVY 131
>KCAB1_CHICK (Q9PWR1) Voltage-gated potassium channel beta-1 subunit (K(+)| channel beta-1 subunit) (Kv-beta-1) Length = 401 Score = 50.1 bits (118), Expect = 2e-06 Identities = 24/57 (42%), Positives = 40/57 (70%), Gaps = 1/57 (1%) Frame = +2 Query: 263 QDGLQYKKLGDSDLLVSEITLGT-MTFGEQNTEKEAHDMLSYSLDQGINILDTAEMY 430 Q G++Y+ LG S L VS + LGT +TFG Q +++ A +++ + + G+N+ DTAE+Y Sbjct: 68 QTGMKYRNLGKSGLRVSCLGLGTWVTFGGQISDEVAEQLMTIAYESGVNLFDTAEVY 124
>KCAB3_XENLA (Q9PTM4) Voltage-gated potassium channel beta-3 subunit (K(+)| channel beta-3 subunit) (Kv-beta-3) Length = 401 Score = 49.7 bits (117), Expect = 3e-06 Identities = 23/55 (41%), Positives = 40/55 (72%), Gaps = 1/55 (1%) Frame = +2 Query: 269 GLQYKKLGDSDLLVSEITLGT-MTFGEQNTEKEAHDMLSYSLDQGINILDTAEMY 430 G++Y+ LG S L VS + LGT +TFG Q +++ A ++++ + + G+N+ DTAE+Y Sbjct: 70 GMKYRNLGKSGLRVSCLGLGTWVTFGSQISDEVAENLMTVAYEHGVNLFDTAEVY 124
>KCAB3_HUMAN (O43448) Voltage-gated potassium channel beta-3 subunit (K(+)| channel beta-3 subunit) (Kv-beta-3) Length = 404 Score = 49.3 bits (116), Expect = 4e-06 Identities = 23/55 (41%), Positives = 39/55 (70%), Gaps = 1/55 (1%) Frame = +2 Query: 269 GLQYKKLGDSDLLVSEITLGT-MTFGEQNTEKEAHDMLSYSLDQGINILDTAEMY 430 G++Y+ LG + VS + LGT +TFG Q +++ A D+L+ + + G+N+ DTAE+Y Sbjct: 77 GMKYRNLGKCGVRVSCLGLGTWVTFGSQISDETAEDVLTVAYEHGVNLFDTAEVY 131
>KCAB1_RAT (P63144) Voltage-gated potassium channel beta-1 subunit (K(+)| channel beta-1 subunit) (Kv-beta-1) Length = 401 Score = 49.3 bits (116), Expect = 4e-06 Identities = 24/57 (42%), Positives = 40/57 (70%), Gaps = 1/57 (1%) Frame = +2 Query: 263 QDGLQYKKLGDSDLLVSEITLGT-MTFGEQNTEKEAHDMLSYSLDQGINILDTAEMY 430 Q G++Y+ LG S L VS + LGT +TFG Q +++ A +++ + + G+N+ DTAE+Y Sbjct: 68 QTGMKYRNLGKSGLRVSCLGLGTWVTFGGQISDEVAERLMTIAYESGVNLFDTAEVY 124
>KCAB1_MOUSE (P63143) Voltage-gated potassium channel beta-1 subunit (K(+)| channel beta-1 subunit) (Kv-beta-1) Length = 401 Score = 49.3 bits (116), Expect = 4e-06 Identities = 24/57 (42%), Positives = 40/57 (70%), Gaps = 1/57 (1%) Frame = +2 Query: 263 QDGLQYKKLGDSDLLVSEITLGT-MTFGEQNTEKEAHDMLSYSLDQGINILDTAEMY 430 Q G++Y+ LG S L VS + LGT +TFG Q +++ A +++ + + G+N+ DTAE+Y Sbjct: 68 QTGMKYRNLGKSGLRVSCLGLGTWVTFGGQISDEVAERLMTIAYESGVNLFDTAEVY 124
>KCAB1_BOVIN (Q4PJK1) Voltage-gated potassium channel beta-1 subunit (K(+)| channel beta-1 subunit) (Kv-beta-1) Length = 401 Score = 49.3 bits (116), Expect = 4e-06 Identities = 24/57 (42%), Positives = 40/57 (70%), Gaps = 1/57 (1%) Frame = +2 Query: 263 QDGLQYKKLGDSDLLVSEITLGT-MTFGEQNTEKEAHDMLSYSLDQGINILDTAEMY 430 Q G++Y+ LG S L VS + LGT +TFG Q +++ A +++ + + G+N+ DTAE+Y Sbjct: 68 QTGMKYRNLGKSGLRVSCLGLGTWVTFGGQISDEVAERLMTIAYESGVNLFDTAEVY 124
>KCAB2_XENLA (Q9PTM5) Voltage-gated potassium channel beta-2 subunit (K(+)| channel beta-2 subunit) (Kv-beta-2) Length = 367 Score = 48.5 bits (114), Expect = 7e-06 Identities = 25/52 (48%), Positives = 36/52 (69%), Gaps = 1/52 (1%) Frame = +2 Query: 278 YKKLGDSDLLVSEITLGT-MTFGEQNTEKEAHDMLSYSLDQGINILDTAEMY 430 Y+ LG S L VS + LGT +TFG Q T++ A +++ + D GIN+ DTAE+Y Sbjct: 39 YRNLGKSGLRVSCLGLGTWVTFGGQITDEMAEQLMTLAYDNGINLFDTAEVY 90
>KCAB2_HUMAN (Q13303) Voltage-gated potassium channel beta-2 subunit (K(+)| channel beta-2 subunit) (Kv-beta-2) (HKvbeta2) Length = 367 Score = 48.5 bits (114), Expect = 7e-06 Identities = 25/52 (48%), Positives = 36/52 (69%), Gaps = 1/52 (1%) Frame = +2 Query: 278 YKKLGDSDLLVSEITLGT-MTFGEQNTEKEAHDMLSYSLDQGINILDTAEMY 430 Y+ LG S L VS + LGT +TFG Q T++ A +++ + D GIN+ DTAE+Y Sbjct: 39 YRNLGKSGLRVSCLGLGTWVTFGGQITDEMAEQLMTLAYDNGINLFDTAEVY 90
>KCAB2_BOVIN (Q27955) Voltage-gated potassium channel beta-2 subunit (K(+)| channel beta-2 subunit) (Kv-beta-2) Length = 367 Score = 48.5 bits (114), Expect = 7e-06 Identities = 25/52 (48%), Positives = 36/52 (69%), Gaps = 1/52 (1%) Frame = +2 Query: 278 YKKLGDSDLLVSEITLGT-MTFGEQNTEKEAHDMLSYSLDQGINILDTAEMY 430 Y+ LG S L VS + LGT +TFG Q T++ A +++ + D GIN+ DTAE+Y Sbjct: 39 YRNLGKSGLRVSCLGLGTWVTFGGQITDEMAEQLMTLAYDNGINLFDTAEVY 90
>KCAB2_RAT (P62483) Voltage-gated potassium channel beta-2 subunit (K(+)| channel beta-2 subunit) (Kv-beta-2) Length = 367 Score = 48.1 bits (113), Expect = 9e-06 Identities = 25/52 (48%), Positives = 36/52 (69%), Gaps = 1/52 (1%) Frame = +2 Query: 278 YKKLGDSDLLVSEITLGT-MTFGEQNTEKEAHDMLSYSLDQGINILDTAEMY 430 Y+ LG S L VS + LGT +TFG Q T++ A +++ + D GIN+ DTAE+Y Sbjct: 39 YRNLGKSGLRVSCLGLGTWVTFGGQITDEMAEHLMTLAYDNGINLFDTAEVY 90
>KCAB2_MOUSE (P62482) Voltage-gated potassium channel beta-2 subunit (K(+)| channel beta-2 subunit) (Kv-beta-2) (Neuroimmune protein F5) Length = 367 Score = 48.1 bits (113), Expect = 9e-06 Identities = 25/52 (48%), Positives = 36/52 (69%), Gaps = 1/52 (1%) Frame = +2 Query: 278 YKKLGDSDLLVSEITLGT-MTFGEQNTEKEAHDMLSYSLDQGINILDTAEMY 430 Y+ LG S L VS + LGT +TFG Q T++ A +++ + D GIN+ DTAE+Y Sbjct: 39 YRNLGKSGLRVSCLGLGTWVTFGGQITDEMAEHLMTLAYDNGINLFDTAEVY 90
>KCAB_ORYSA (Q40648) Probable voltage-gated potassium channel beta subunit| (K(+) channel beta subunit) Length = 328 Score = 47.0 bits (110), Expect = 2e-05 Identities = 25/54 (46%), Positives = 33/54 (61%), Gaps = 1/54 (1%) Frame = +2 Query: 272 LQYKKLGDSDLLVSEITLGT-MTFGEQNTEKEAHDMLSYSLDQGINILDTAEMY 430 +QYK LG S L VS+++ G +TFG Q KEA +L D G+N D AE+Y Sbjct: 1 MQYKNLGRSGLRVSQLSYGAWVTFGNQLDVKEAKALLQACRDAGVNFFDNAEVY 54
>KCAB1_RABIT (Q9XT31) Voltage-gated potassium channel beta-1 subunit (K(+)| channel beta-1 subunit) (Kv-beta-1) Length = 419 Score = 45.4 bits (106), Expect = 6e-05 Identities = 25/73 (34%), Positives = 44/73 (60%), Gaps = 3/73 (4%) Frame = +2 Query: 221 WHAR--RLRSQVRAQAQDGLQYKKLGDSDLLVSEITLGT-MTFGEQNTEKEAHDMLSYSL 391 W+ + L S+ G+ ++ LG S L VS + LGT +TFG Q +++ A +++ + Sbjct: 70 WYLKLCELSSEHTTAYTTGMPHRNLGKSGLRVSCLGLGTWVTFGGQISDEVAERLMTIAY 129 Query: 392 DQGINILDTAEMY 430 + G+N+ DTAE+Y Sbjct: 130 ESGVNLFDTAEVY 142
>KCAB1_HUMAN (Q14722) Voltage-gated potassium channel beta-1 subunit (K(+)| channel beta-1 subunit) (Kv-beta-1) Length = 419 Score = 45.4 bits (106), Expect = 6e-05 Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 1/66 (1%) Frame = +2 Query: 236 LRSQVRAQAQDGLQYKKLGDSDLLVSEITLGT-MTFGEQNTEKEAHDMLSYSLDQGINIL 412 L S+ G+ ++ LG S L VS + LGT +TFG Q +++ A +++ + + G+N+ Sbjct: 77 LSSEHTTVCTTGMPHRNLGKSGLRVSCLGLGTWVTFGGQISDEVAERLMTIAYESGVNLF 136 Query: 413 DTAEMY 430 DTAE+Y Sbjct: 137 DTAEVY 142
>YAJO_ECOLI (P77735) Hypothetical oxidoreductase yajO (EC 1.-.-.-)| Length = 324 Score = 45.1 bits (105), Expect = 8e-05 Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 8/61 (13%) Frame = +2 Query: 272 LQYKKLGDSDLLVSEITLGTMTFGEQN--------TEKEAHDMLSYSLDQGINILDTAEM 427 +QY LG +DL VS + LG MTFGE + E+ + ++ +L+ GIN DTA Sbjct: 1 MQYNPLGKTDLRVSRLCLGCMTFGEPDRGNHAWTLPEESSRPIIKRALEGGINFFDTANS 60 Query: 428 Y 430 Y Sbjct: 61 Y 61
>YQKF_BACSU (P54569) Hypothetical oxidoreductase yqkF (EC 1.-.-.-)| Length = 306 Score = 44.3 bits (103), Expect = 1e-04 Identities = 22/53 (41%), Positives = 37/53 (69%) Frame = +2 Query: 272 LQYKKLGDSDLLVSEITLGTMTFGEQNTEKEAHDMLSYSLDQGINILDTAEMY 430 ++ +KLG SDL +SE+ LG M+ G + + +A +L +++ GIN LDTA++Y Sbjct: 1 MRKRKLGTSDLDISEVGLGCMSLGTE--KNKALSILDEAIELGINYLDTADLY 51
>GS69_BACSU (P80874) General stress protein 69 (EC 1.1.1.-) (GSP69) (AKR11B)| Length = 331 Score = 35.8 bits (81), Expect = 0.047 Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 4/57 (7%) Frame = +2 Query: 272 LQYKKLGDSDLLVSEITLGTMTFGEQ----NTEKEAHDMLSYSLDQGINILDTAEMY 430 ++Y + D+ + S I LGT G EK + + + +LDQGI ++DTA Y Sbjct: 1 MEYTSIADTGIEASRIGLGTWAIGGTMWGGTDEKTSIETIRAALDQGITLIDTAPAY 57
>IOLS_BACSU (P46336) Protein iolS (EC 1.1.1.-) (Vegetative protein 147)| (VEG147) (AKR11A) Length = 310 Score = 34.7 bits (78), Expect = 0.11 Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 5/56 (8%) Frame = +2 Query: 284 KLGDSDLLVSEITLGTMTFGEQN-----TEKEAHDMLSYSLDQGINILDTAEMYPV 436 KLG SDL V I LGT G N E+ +++ ++ G+ +LDTA +Y + Sbjct: 5 KLGKSDLQVFPIGLGTNAVGGHNLYPNLNEETGKELVREAIRNGVTMLDTAYIYGI 60
>YCR4_ENTAG (Q01333) Hypothetical 11.2 kDa protein in crtE 3'region (ORF4)| Length = 103 Score = 34.7 bits (78), Expect = 0.11 Identities = 15/50 (30%), Positives = 29/50 (58%) Frame = +2 Query: 281 KKLGDSDLLVSEITLGTMTFGEQNTEKEAHDMLSYSLDQGINILDTAEMY 430 + LG + L + + G FG E+++ +L L++G+N +DTA++Y Sbjct: 4 RSLGTTGLHIPPLVFGGNVFGWTVDEQQSFSLLDALLERGLNAIDTADVY 53
>PLR1_SCHPO (O14295) Pyridoxal reductase (EC 1.1.1.65) (PL reductase) (PL-red)| Length = 333 Score = 32.0 bits (71), Expect = 0.68 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 8/52 (15%) Frame = +2 Query: 305 LVSEITLGTMTFG--------EQNTEKEAHDMLSYSLDQGINILDTAEMYPV 436 +VS +G + FG +Q ++EA ++++Y+L QG N D E Y V Sbjct: 3 IVSGFKVGPIGFGLMGLTWKPKQTPDEEAFEVMNYALSQGSNYWDAGEFYGV 54
>YCCK_BACSU (P46905) Hypothetical oxidoreductase yccK (EC 1.-.-.-)| Length = 310 Score = 32.0 bits (71), Expect = 0.68 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 5/57 (8%) Frame = +2 Query: 275 QYKKLGDSDLLVSEITLGTMTFGEQN-----TEKEAHDMLSYSLDQGINILDTAEMY 430 Q + LG + L V I G G N ++ D++ +LD G+N +DTA +Y Sbjct: 3 QTRTLGKTKLKVKRIGFGANAVGGHNLFPNLNDETGKDLVRTALDGGVNFIDTAFIY 59
>PRTP_TUHV2 (Q9WRL6) Probable processing and transport protein| Length = 782 Score = 30.0 bits (66), Expect = 2.6 Identities = 17/47 (36%), Positives = 24/47 (51%) Frame = +1 Query: 121 FQYATNGAICLRRDPLLIL*QWLTGVDCPPVSKMARETPAQPSSSAG 261 F YA G + +D L+L Q L G PP PA+P+++AG Sbjct: 701 FLYA-GGGVWKSKDLYLLLYQHLNGAAAPPPPAAPSPPPAEPATTAG 746
>FLGK_BUCAI (P57428) Flagellar hook-associated protein 1 (HAP1)| Length = 543 Score = 29.3 bits (64), Expect = 4.4 Identities = 12/38 (31%), Positives = 25/38 (65%) Frame = -3 Query: 349 LLPKSHCSKSNLADKKVRISQLLILQPILCLRSNLAAQ 236 +L + + + + D++ +I QLL L+ +LC +SN+ +Q Sbjct: 66 ILEEKRKTNAEVQDEQTKIEQLLKLEDLLCEKSNIFSQ 103
>Y087_BUCAI (P57189) Hypothetical protein BU087| Length = 970 Score = 29.3 bits (64), Expect = 4.4 Identities = 16/48 (33%), Positives = 25/48 (52%) Frame = -3 Query: 388 RIRKHIMCFLLCVLLPKSHCSKSNLADKKVRISQLLILQPILCLRSNL 245 +I K+I ++L K H K KVR+S L +L I +R+N+ Sbjct: 121 KISKNIFFIKYPIILKKIHADKILFTSPKVRVSFLDVLSGIKLVRNNI 168
>TCPE_VIBCH (P29487) Toxin coregulated pilus biosynthesis protein E (TCP pilus| biosynthesis protein tcpE) Length = 340 Score = 29.3 bits (64), Expect = 4.4 Identities = 19/78 (24%), Positives = 40/78 (51%), Gaps = 5/78 (6%) Frame = +2 Query: 128 MQQMALSAFVATPSSSYSNGLPGSTA-----RRSQRWHARRLRSQVRAQAQDGLQYKKLG 292 ++ +A + F+A S + +P ++ RW + L+ +++A Q+GL YK+ Sbjct: 204 VKHIAATEFLANMSMLLDSRVPFKEGLDIVDHKTTRWLSSHLQ-RMKANMQEGLDYKQAL 262 Query: 293 DSDLLVSEITLGTMTFGE 346 D++LL ++ L + E Sbjct: 263 DTNLLDKKMLLTMAVYSE 280
>THIG_STRCO (Q9S2N4) Thiazole biosynthesis protein thiG| Length = 264 Score = 28.9 bits (63), Expect = 5.8 Identities = 19/46 (41%), Positives = 24/46 (52%) Frame = -2 Query: 278 TATHLVPALELGCAGVSRAIFETGGQSTPVSHCYRMRRGSRRRQIA 141 TA+ + A+ELGCAGV A T Q PV MR G ++A Sbjct: 189 TASDVALAMELGCAGVMLASAVTRAQE-PVLMAAAMRAGVEAGRLA 233
>SYH_PYRKO (Q5JIM2) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA| ligase) (HisRS) Length = 436 Score = 28.9 bits (63), Expect = 5.8 Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 2/64 (3%) Frame = +2 Query: 179 SNGLPGSTARRSQRWHARRLRSQVRAQAQDGLQYKKL-GDSDLLVSEITLGTMTFGEQNT 355 + GL +T R R+LR + + G+ Y L G DL ++TL M GEQ + Sbjct: 361 TQGLREATVRADIELTGRKLRKALDYAGKLGVPYVVLVGKKDLEAGKVTLRDMKSGEQKS 420 Query: 356 -EKE 364 EKE Sbjct: 421 IEKE 424
>CMTA3_ARATH (Q8GSA7) Calmodulin-binding transcription activator 3| (Signal-responsive protein 1) (Ethylene-induced calmodulin-binding protein a) (EICBP.a) (Ethylene-induced calmodulin-binding protein 1) (EICBP1) Length = 1032 Score = 28.9 bits (63), Expect = 5.8 Identities = 22/69 (31%), Positives = 31/69 (44%) Frame = +2 Query: 164 PSSSYSNGLPGSTARRSQRWHARRLRSQVRAQAQDGLQYKKLGDSDLLVSEITLGTMTFG 343 PS S S+ TA R+ A R+ RAQ+ Q K+ GD L +SE +M Sbjct: 779 PSPSSSSLTDSLTAVRNATQAAARIHQVFRAQSFQKKQLKEFGDKKLGMSEERALSMLAP 838 Query: 344 EQNTEKEAH 370 + + AH Sbjct: 839 KTHKSGRAH 847
>CALMF_NAEGR (P53440) Calmodulin, flagellar (CAM-1)| Length = 155 Score = 28.9 bits (63), Expect = 5.8 Identities = 15/49 (30%), Positives = 23/49 (46%) Frame = +2 Query: 278 YKKLGDSDLLVSEITLGTMTFGEQNTEKEAHDMLSYSLDQGINILDTAE 424 + K GD + SE+ + G+ TE E HDM++ G +D E Sbjct: 26 FDKDGDGTITTSELGTVMRSLGQNPTEAELHDMINEVDADGNGTIDFTE 74
>YMT1_YEAST (Q04212) Hypothetical oxidoreductase YMR041C (EC 1.-.-.-)| Length = 335 Score = 28.9 bits (63), Expect = 5.8 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 5/55 (9%) Frame = +2 Query: 281 KKLGDSDLL-VSEITLGTMTFGEQNTEKEA----HDMLSYSLDQGINILDTAEMY 430 +K+ DL VS + LG +Q T++ D++ Y+ GIN +DT+ Y Sbjct: 4 EKVNPFDLASVSPLVLGGAILNQQYTDEPESIPLEDIIKYAFSHGINAIDTSPYY 58
>REB1_YEAST (P21538) DNA-binding protein REB1 (QBP)| Length = 810 Score = 28.5 bits (62), Expect = 7.6 Identities = 13/46 (28%), Positives = 21/46 (45%) Frame = +2 Query: 257 QAQDGLQYKKLGDSDLLVSEITLGTMTFGEQNTEKEAHDMLSYSLD 394 + Q LQ K+ D D + + + + G+ E + HD L LD Sbjct: 598 EQQQLLQQKQQDDDDAIAAAAAAASSSLGDNKDEDKPHDSLGIQLD 643
>MEGF6_MOUSE (Q80V70) Multiple epidermal growth factor-like domains 6 (EGF-like| domain-containing protein 3) (Multiple EGF-like domain protein 3) (Fragment) Length = 656 Score = 28.1 bits (61), Expect = 9.9 Identities = 16/40 (40%), Positives = 19/40 (47%) Frame = +1 Query: 190 TGVDCPPVSKMARETPAQPSSSAGTRWVAV*EAGRFGPSC 309 TGV C P+S + P + AGT GRFGP C Sbjct: 567 TGVPCDPISGLCLCPPGR----AGTTCDLDCRRGRFGPGC 602 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 61,212,410 Number of Sequences: 219361 Number of extensions: 1181288 Number of successful extensions: 3830 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 3695 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3827 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2570413340 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
