ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name basd22o05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL606682.3|OSJN00085 Oryza sativa genomic DNA, chromosome 4,... 46 0.028
2dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.028
3gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 44 0.11
4gb|AY661549.1| Penaeus monodon 5-HT1 receptor (5-HT1) mRNA, comp... 42 0.43
5ref|XM_463992.1| Oryza sativa (japonica cultivar-group), mRNA 42 0.43
6dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.43
7dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.43
8dbj|AP004886.3| Oryza sativa (japonica cultivar-group) genomic D... 42 0.43
9dbj|AK109213.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.43
10dbj|AK063610.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.43
11gb|AF079138.1|AF079138 Streptomyces venezuelae methymycin/pikrom... 42 0.43
12gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 0.43
13emb|AL844497.4|CNS08CAU Oryza sativa chromosome 12, . BAC OSJNBa... 42 0.43
14ref|NM_193402.1| Oryza sativa (japonica cultivar-group), predic... 40 1.7
15gb|BC083409.1| Danio rerio zgc:103513, mRNA (cDNA clone MGC:1035... 40 1.7
16ref|NM_001006015.1| Danio rerio zgc:103513 (zgc:103513), mRNA 40 1.7
17dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 1.7
18dbj|AP004258.3| Oryza sativa (japonica cultivar-group) genomic D... 40 1.7
19dbj|AP004225.2| Oryza sativa (japonica cultivar-group) genomic D... 40 1.7
20emb|AL606450.3|OSJN00001 Oryza sativa genomic DNA, chromosome 4,... 40 1.7
21gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 38 6.7
22gb|AE010438.1| Methanopyrus kandleri AV19 section 137 of 157 of ... 38 6.7
23ref|XM_522895.1| PREDICTED: Pan troglodytes similar to mixed-lin... 38 6.7
24ref|XM_466413.1| Oryza sativa (japonica cultivar-group), mRNA 38 6.7
25ref|XM_465200.1| Oryza sativa (japonica cultivar-group), mRNA 38 6.7
26ref|XM_470297.1| Oryza sativa (japonica cultivar-group), mRNA 38 6.7
27gb|BT018848.1| Zea mays clone EL01N0555E10.d mRNA sequence 38 6.7
28gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chr... 38 6.7
29gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 38 6.7
30gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 38 6.7
31gb|AC103406.7| Mus musculus chromosome 9, clone RP23-106O8, comp... 38 6.7
32gb|AC011705.11| Drosophila melanogaster clone BACR10C18, complet... 38 6.7
33ref|XM_591761.2| PREDICTED: Bos taurus similar to GBP protein is... 38 6.7
34ref|XM_871708.1| PREDICTED: Bos taurus similar to GBP protein is... 38 6.7
35gb|AC084310.16| Mus musculus chromosome 1, clone RP23-10C10, com... 38 6.7
36ref|NM_033141.2| Homo sapiens mitogen-activated protein kinase k... 38 6.7
37gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 38 6.7
38gb|AC164306.3| Mus musculus BAC clone RP23-190A21 from chromosom... 38 6.7
39ref|XM_993077.1| PREDICTED: Mus musculus mitogen-activated prote... 38 6.7
40gb|AC116460.10| Mus musculus chromosome 10, clone RP23-244G12, c... 38 6.7
41ref|XM_749768.1| Aspergillus fumigatus Af293 hypothetical protei... 38 6.7
42ref|XM_749769.1| Aspergillus fumigatus Af293 hypothetical protei... 38 6.7
43gb|AC102105.8| Mus musculus chromosome 12, clone RP23-89G24, com... 38 6.7
44gb|AC012526.35| Mus musculus strain 129S6/SvEvTac clone rp21-671... 38 6.7
45gb|AC012399.40| Mus musculus strain 129S6/SvEvTac clone rp21-184... 38 6.7
46gb|DQ457053.1| Gibberella moniliformis heterotrimeric G protein ... 38 6.7
47emb|AL663118.2| Human DNA sequence from clone RP13-377G1 on chro... 38 6.7
48emb|AL590816.17| Human DNA sequence from clone RP11-263G23 on ch... 38 6.7
49emb|AL359881.28| Human DNA sequence from clone RP11-338N10 on ch... 38 6.7
50emb|AL354720.14| Human DNA sequence from clone RP11-505F3 on chr... 38 6.7
51emb|AL353581.14| Human DNA sequence from clone RP11-65L19 on chr... 38 6.7
52gb|CP000088.1| Thermobifida fusca YX, complete genome 38 6.7
53emb|AL589735.12| Mouse DNA sequence from clone RP23-211M15 on ch... 38 6.7
54gb|AY327900.1| Homo sapiens mixed-lineage protein kinase 1 (MAP3... 38 6.7
55gb|AC073556.11| Oryza sativa chromosome 3 BAC OSJNBa0091P11 geno... 38 6.7
56gb|AC183495.1| Brassica oleracea Contig A, complete sequence 38 6.7
57gb|DQ399653.1| Nonomuraea longicatena K-252a biosynthesis gene c... 38 6.7
58dbj|AK155677.1| Mus musculus B6-derived CD11 +ve dendritic cells... 38 6.7
59gb|AC175197.2| Sporobolomyces roseus clone JGIBAIF-21O18, comple... 38 6.7
60ref|XM_701539.1| PREDICTED: Danio rerio similar to Tripartite mo... 38 6.7
61ref|XM_701538.1| PREDICTED: Danio rerio similar to Tripartite mo... 38 6.7
62ref|XM_701537.1| PREDICTED: Danio rerio similar to Tripartite mo... 38 6.7
63ref|XM_701536.1| PREDICTED: Danio rerio similar to Tripartite mo... 38 6.7
64ref|XM_701535.1| PREDICTED: Danio rerio similar to Tripartite mo... 38 6.7
65ref|XM_677589.1| PREDICTED: Danio rerio similar to Tripartite mo... 38 6.7
66gb|CP000249.1| Frankia sp. CcI3, complete genome 38 6.7
67emb|BX511060.7| Zebrafish DNA sequence from clone CH211-210L19 i... 38 6.7
68gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 38 6.7
69gb|AC124595.4| Mus musculus BAC clone RP23-18J1 from chromosome ... 38 6.7
70gb|AC084822.36| Mus musculus strain C57BL/6J clone rp23-47o21 ma... 38 6.7
71gb|AC008338.7|AC008338 Drosophila melanogaster, chromosome X, re... 38 6.7
72tpg|BK000438.1| TPA: TPA_exp: Homo sapiens RING finger protein C... 38 6.7
73dbj|AK053843.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN f... 38 6.7
74dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 38 6.7
75gb|AF251442.1|AF251442 Homo sapiens mixed lineage kinase MLK1 mR... 38 6.7
76gb|AC004816.1|AC004816 Homo sapiens PAC clone RP6-65G23 from 14q... 38 6.7
77gb|AC083869.2|AC083869 Homo sapiens chromosome 7 clone RP11-733N... 38 6.7
78gb|AC093576.3| Homo sapiens chromosome 1 clone RP11-359C24, comp... 38 6.7
79dbj|AP003381.3| Oryza sativa (japonica cultivar-group) genomic D... 38 6.7
80dbj|AP003023.2| Oryza sativa (japonica cultivar-group) genomic D... 38 6.7
81gb|AC133487.14| Mus musculus strain C57BL/6J clone rp23-285e22, ... 38 6.7
82gb|AC009541.16|AC009541 Human Chromosome 7 clone RP11-233L24, co... 38 6.7
83dbj|AP006161.3| Oryza sativa (japonica cultivar-group) genomic D... 38 6.7
84dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 38 6.7
85dbj|AP006070.2| Oryza sativa (japonica cultivar-group) genomic D... 38 6.7
86dbj|AP005607.3| Oryza sativa (japonica cultivar-group) genomic D... 38 6.7
87dbj|AP004845.3| Oryza sativa (japonica cultivar-group) genomic D... 38 6.7
88dbj|AB124585.1| Lethenteron japonicum LjPitxA mRNA for Pitx homo... 38 6.7
89gb|AC153531.5| Mus musculus 10 BAC RP23-22C3 (Roswell Park Cance... 38 6.7
90dbj|AK105275.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 6.7
91emb|AJ239323.3|HS519N18 Homo sapiens chromosome X sequencefrom P... 38 6.7
92gb|AE003571.4| Drosophila melanogaster chromosome X, section 68 ... 38 6.7
93emb|CT009678.9| Zebrafish DNA sequence from clone CH73-30D3 in l... 38 6.7
94emb|AL590723.13| Human DNA sequence from clone RP11-492I21 on ch... 38 6.7
95gb|AE017221.1| Thermus thermophilus HB27, complete genome 38 6.7
96ref|NM_177395.3| Mus musculus mitogen-activated protein kinase k... 38 6.7
97emb|AL611986.15| Mouse DNA sequence from clone RP23-74I9 on chro... 38 6.7
98emb|AL606916.4| Mouse DNA sequence from clone RP23-144L24 on chr... 38 6.7
99emb|AL512721.1|HSM802852 Homo sapiens mRNA; cDNA DKFZp547K042 (f... 38 6.7 
>emb|AL606682.3|OSJN00085 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0065O17,
              complete sequence
          Length = 167269

 Score = 46.1 bits (23), Expect = 0.028
 Identities = 45/51 (88%), Gaps = 1/51 (1%)
 Strand = Plus / Minus

                                                                 
Query: 11     ggacgaggcggcgggcgaggaggacatctgaggagctggagagggaggtgg 61
              |||||||||||| |  |||||||||||  |||||||||||| |||||||||
Sbjct: 128343 ggacgaggcggctgaggaggaggacatg-gaggagctggagcgggaggtgg 128294
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 46.1 bits (23), Expect = 0.028
 Identities = 45/51 (88%), Gaps = 1/51 (1%)
 Strand = Plus / Minus

                                                                   
Query: 11       ggacgaggcggcgggcgaggaggacatctgaggagctggagagggaggtgg 61
                |||||||||||| |  |||||||||||  |||||||||||| |||||||||
Sbjct: 27965490 ggacgaggcggctgaggaggaggacatg-gaggagctggagcgggaggtgg 27965441



 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 91      cgccgtgacgccgccgtccg 110
               ||||||||||||||||||||
Sbjct: 1070450 cgccgtgacgccgccgtccg 1070431
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 44.1 bits (22), Expect = 0.11
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 14      cgaggcggcgggcgaggaggac 35
               ||||||||||||||||||||||
Sbjct: 3790817 cgaggcggcgggcgaggaggac 3790796
to top
>gb|AY661549.1| Penaeus monodon 5-HT1 receptor (5-HT1) mRNA, complete cds
          Length = 2291

 Score = 42.1 bits (21), Expect = 0.43
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 11  ggacgaggcggcgggcgaggaggac 35
           ||||||||| |||||||||||||||
Sbjct: 813 ggacgaggccgcgggcgaggaggac 789
to top
>ref|XM_463992.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 581

 Score = 42.1 bits (21), Expect = 0.43
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 42  ggagctggagagggaggtggc 62
           |||||||||||||||||||||
Sbjct: 188 ggagctggagagggaggtggc 208
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 0.43
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 6        ggagcggacgaggcggcgggcgagg 30
                ||||||| |||||||||||||||||
Sbjct: 21514206 ggagcggccgaggcggcgggcgagg 21514182
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 0.43
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 42      ggagctggagagggaggtggc 62
               |||||||||||||||||||||
Sbjct: 1558956 ggagctggagagggaggtggc 1558936



 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 6        ggagcggacgaggcggcgg 24
                |||||||||||||||||||
Sbjct: 22249260 ggagcggacgaggcggcgg 22249242



 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 6        ggagcggacgaggcggcgg 24
                |||||||||||||||||||
Sbjct: 12246973 ggagcggacgaggcggcgg 12246955
to top
>dbj|AP004886.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0576F08
          Length = 135314

 Score = 42.1 bits (21), Expect = 0.43
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 42     ggagctggagagggaggtggc 62
              |||||||||||||||||||||
Sbjct: 122377 ggagctggagagggaggtggc 122357
to top
>dbj|AK109213.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-156-D07, full
           insert sequence
          Length = 581

 Score = 42.1 bits (21), Expect = 0.43
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 42  ggagctggagagggaggtggc 62
           |||||||||||||||||||||
Sbjct: 188 ggagctggagagggaggtggc 208
to top
>dbj|AK063610.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-D03, full
           insert sequence
          Length = 988

 Score = 42.1 bits (21), Expect = 0.43
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 6   ggagcggacgaggcggcgggcgagg 30
           ||||||| |||||||||||||||||
Sbjct: 322 ggagcggccgaggcggcgggcgagg 298
to top
>gb|AF079138.1|AF079138 Streptomyces venezuelae methymycin/pikromycin polyketide synthase gene
             cluster, complete sequence
          Length = 37948

 Score = 42.1 bits (21), Expect = 0.43
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 9     gcggacgaggcggcgggcgag 29
             |||||||||||||||||||||
Sbjct: 20256 gcggacgaggcggcgggcgag 20236
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 0.43
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 6        ggagcggacgaggcggcgggcgagg 30
                ||||||| |||||||||||||||||
Sbjct: 21442527 ggagcggccgaggcggcgggcgagg 21442503
to top
>emb|AL844497.4|CNS08CAU Oryza sativa chromosome 12, . BAC OSJNBa0085B23 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 158019

 Score = 42.1 bits (21), Expect = 0.43
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 6      ggagcggacgaggcggcgggcgagg 30
              ||||||| |||||||||||||||||
Sbjct: 131683 ggagcggccgaggcggcgggcgagg 131707
to top
>ref|NM_193402.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2886

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 42  ggagctggagagggaggtgg 61
           ||||||||||||||||||||
Sbjct: 534 ggagctggagagggaggtgg 553
to top
>gb|BC083409.1| Danio rerio zgc:103513, mRNA (cDNA clone MGC:103513 IMAGE:7239029),
           complete cds
          Length = 1375

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 40  gaggagctggagagggaggtggcc 63
           |||||||||||||||||| |||||
Sbjct: 976 gaggagctggagagggagctggcc 999
to top
>ref|NM_001006015.1| Danio rerio zgc:103513 (zgc:103513), mRNA
          Length = 1375

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 40  gaggagctggagagggaggtggcc 63
           |||||||||||||||||| |||||
Sbjct: 976 gaggagctggagagggagctggcc 999
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 42       ggagctggagagggaggtgg 61
                ||||||||||||||||||||
Sbjct: 20624966 ggagctggagagggaggtgg 20624985



 Score = 38.2 bits (19), Expect = 6.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                       
Query: 12       gacgaggcggcgggcgaggagga 34
                |||||||||||||| ||||||||
Sbjct: 29276564 gacgaggcggcgggagaggagga 29276586
to top
>dbj|AP004258.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0024F24
          Length = 172642

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 42    ggagctggagagggaggtgg 61
             ||||||||||||||||||||
Sbjct: 86942 ggagctggagagggaggtgg 86961
to top
>dbj|AP004225.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1156H12
          Length = 159509

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 42     ggagctggagagggaggtgg 61
              ||||||||||||||||||||
Sbjct: 148788 ggagctggagagggaggtgg 148807
to top
>emb|AL606450.3|OSJN00001 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0020P07,
             complete sequence
          Length = 167895

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 91    cgccgtgacgccgccgtccg 110
             ||||||||||||||||||||
Sbjct: 12819 cgccgtgacgccgccgtccg 12800
to top
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 12     gacgaggcggcgggcgagg 30
              |||||||||||||||||||
Sbjct: 835565 gacgaggcggcgggcgagg 835547
to top
>gb|AE010438.1| Methanopyrus kandleri AV19 section 137 of 157 of the complete genome
          Length = 13816

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 13   acgaggcggcgggcgagga 31
            |||||||||||||||||||
Sbjct: 9006 acgaggcggcgggcgagga 9024
to top
>ref|XM_522895.1| PREDICTED: Pan troglodytes similar to mixed-lineage protein kinase
           1 (LOC467498), mRNA
          Length = 3750

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 13  acgaggcggcgggcgagga 31
           |||||||||||||||||||
Sbjct: 191 acgaggcggcgggcgagga 209
to top
>ref|XM_466413.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1764

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 6   ggagcggacgaggcggcgg 24
           |||||||||||||||||||
Sbjct: 293 ggagcggacgaggcggcgg 275
to top
>ref|XM_465200.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 762

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 6   ggagcggacgaggcggcgg 24
           |||||||||||||||||||
Sbjct: 531 ggagcggacgaggcggcgg 513
to top
>ref|XM_470297.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1533

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 17  ggcggcgggcgaggaggac 35
           |||||||||||||||||||
Sbjct: 312 ggcggcgggcgaggaggac 294
to top
>gb|BT018848.1| Zea mays clone EL01N0555E10.d mRNA sequence
          Length = 2515

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 17  ggcggcgggcgaggaggac 35
           |||||||||||||||||||
Sbjct: 185 ggcggcgggcgaggaggac 167
to top
>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete
              sequence
          Length = 2300533

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 88     cgccgccgtgacgccgccg 106
              |||||||||||||||||||
Sbjct: 764508 cgccgccgtgacgccgccg 764490
to top
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 88      cgccgccgtgacgccgccg 106
               |||||||||||||||||||
Sbjct: 1392209 cgccgccgtgacgccgccg 1392227
to top
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 4      taggagcggacgaggcggc 22
              |||||||||||||||||||
Sbjct: 102328 taggagcggacgaggcggc 102310
to top
>gb|AC103406.7| Mus musculus chromosome 9, clone RP23-106O8, complete sequence
          Length = 174604

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 40     gaggagctggagagggagg 58
              |||||||||||||||||||
Sbjct: 153934 gaggagctggagagggagg 153916
to top
>gb|AC011705.11| Drosophila melanogaster clone BACR10C18, complete sequence
          Length = 170975

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 10     cggacgaggcggcgggcga 28
              |||||||||||||||||||
Sbjct: 150547 cggacgaggcggcgggcga 150565
to top
>ref|XM_591761.2| PREDICTED: Bos taurus similar to GBP protein isoform a, transcript
            variant 1 (LOC540137), mRNA
          Length = 3382

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 20   ggcgggcgaggaggacatc 38
            |||||||||||||||||||
Sbjct: 3057 ggcgggcgaggaggacatc 3075
to top
>ref|XM_871708.1| PREDICTED: Bos taurus similar to GBP protein isoform a, transcript
            variant 2 (LOC540137), mRNA
          Length = 2572

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 20   ggcgggcgaggaggacatc 38
            |||||||||||||||||||
Sbjct: 2247 ggcgggcgaggaggacatc 2265
to top
>gb|AC084310.16| Mus musculus chromosome 1, clone RP23-10C10, complete sequence
          Length = 194800

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 34    acatctgaggagctggaga 52
             |||||||||||||||||||
Sbjct: 44287 acatctgaggagctggaga 44269
to top
>ref|NM_033141.2| Homo sapiens mitogen-activated protein kinase kinase kinase 9
           (MAP3K9), mRNA
          Length = 5602

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 13  acgaggcggcgggcgagga 31
           |||||||||||||||||||
Sbjct: 188 acgaggcggcgggcgagga 206
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 17      ggcggcgggcgaggaggac 35
               |||||||||||||||||||
Sbjct: 3706616 ggcggcgggcgaggaggac 3706598
to top
>gb|AC164306.3| Mus musculus BAC clone RP23-190A21 from chromosome 17, complete
             sequence
          Length = 206180

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 43    gagctggagagggaggtgg 61
             |||||||||||||||||||
Sbjct: 27752 gagctggagagggaggtgg 27770
to top
>ref|XM_993077.1| PREDICTED: Mus musculus mitogen-activated protein kinase kinase
           kinase 9 (Map3k9), mRNA
          Length = 3259

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 13  acgaggcggcgggcgagga 31
           |||||||||||||||||||
Sbjct: 468 acgaggcggcgggcgagga 486
to top
>gb|AC116460.10| Mus musculus chromosome 10, clone RP23-244G12, complete sequence
          Length = 203330

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 39    tgaggagctggagagggaggtgg 61
             ||||||| |||||||||||||||
Sbjct: 28535 tgaggagatggagagggaggtgg 28513
to top
>ref|XM_749768.1| Aspergillus fumigatus Af293 hypothetical protein (Afu3g07490)
           partial mRNA
          Length = 768

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 39  tgaggagctggagagggaggtgg 61
           ||||||| |||||||||||||||
Sbjct: 642 tgaggaggtggagagggaggtgg 664
to top
>ref|XM_749769.1| Aspergillus fumigatus Af293 hypothetical protein (Afu3g07480) partial
            mRNA
          Length = 2289

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 39   tgaggagctggagagggaggtgg 61
            ||||||| |||||||||||||||
Sbjct: 2250 tgaggaggtggagagggaggtgg 2228
to top
>gb|AC102105.8| Mus musculus chromosome 12, clone RP23-89G24, complete sequence
          Length = 188853

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                        
Query: 31    aggacatctgaggagctggagagggag 57
             |||||||  ||||||||||||||||||
Sbjct: 71209 aggacatgggaggagctggagagggag 71183
to top
>gb|AC012526.35| Mus musculus strain 129S6/SvEvTac clone rp21-671i11 map 16, complete
              sequence
          Length = 186272

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 35     catctgaggagctggagag 53
              |||||||||||||||||||
Sbjct: 172136 catctgaggagctggagag 172154
to top
>gb|AC012399.40| Mus musculus strain 129S6/SvEvTac clone rp21-184c17 map 16, complete
             sequence
          Length = 146040

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 35    catctgaggagctggagag 53
             |||||||||||||||||||
Sbjct: 89199 catctgaggagctggagag 89181
to top
>gb|DQ457053.1| Gibberella moniliformis heterotrimeric G protein beta subunit (GBB1)
            gene, complete cds
          Length = 5840

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 43   gagctggagagggaggtgg 61
            |||||||||||||||||||
Sbjct: 1466 gagctggagagggaggtgg 1484
to top
>emb|AL663118.2| Human DNA sequence from clone RP13-377G1 on chromosome Xp11.22-11.3
             Contains the 3' end of the CLCN5 gene for chloride channel
             5 (nephrolithiasis 2, X-linked, Dent disease), the gene
             for a novel protein similar to peptide YY (PYY) and two
             CpG islands, complete sequence
          Length = 146633

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 40    gaggagctggagagggagg 58
             |||||||||||||||||||
Sbjct: 64224 gaggagctggagagggagg 64206
to top
>emb|AL590816.17| Human DNA sequence from clone RP11-263G23 on chromosome 13, complete
            sequence
          Length = 3994

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 30   gaggacatctgaggagctg 48
            |||||||||||||||||||
Sbjct: 1418 gaggacatctgaggagctg 1400
to top
>emb|AL359881.28| Human DNA sequence from clone RP11-338N10 on chromosome 1 Contains part
             of the CAMTA1 gene for calmodulin binding transcription
             activator 1 and two CpG islands, complete sequence
          Length = 65922

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 40    gaggagctggagagggagg 58
             |||||||||||||||||||
Sbjct: 34981 gaggagctggagagggagg 34963
to top
>emb|AL354720.14| Human DNA sequence from clone RP11-505F3 on chromosome 13 Contains the 3'
              end of the gene for progesterone-induced blocking factor 1
              (PIBF1), a proteasome (prosome, macropain) 26S subunit,
              non-ATPase, 10 (PSMD10) pseudogene, the KLF5 gene for
              Kruppel-like factor 5 (intestinal)(CKLF, IKLF, BTEB2), a
              fatty acid binding protein 5 (psoriasis-associated)
              (FABP5)(EFABP, E-FABP, PAFABP, PA-FABP) pseudogene and a
              CpG island, complete sequence
          Length = 199882

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 30     gaggacatctgaggagctg 48
              |||||||||||||||||||
Sbjct: 199300 gaggacatctgaggagctg 199282
to top
>emb|AL353581.14| Human DNA sequence from clone RP11-65L19 on chromosome 13 Contains a heat
              shock 90kDa protein 1, beta (HSPCB) pseudogene, a novel
              gene and a tubby like protein 3 (TULP3) pseudogene,
              complete sequence
          Length = 148942

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 41     aggagctggagagggaggt 59
              |||||||||||||||||||
Sbjct: 106818 aggagctggagagggaggt 106800
to top
>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 11      ggacgaggcggcgggcgag 29
               |||||||||||||||||||
Sbjct: 1203013 ggacgaggcggcgggcgag 1203031
to top
>emb|AL589735.12| Mouse DNA sequence from clone RP23-211M15 on chromosome 13 contains the
             gene for a novel protein similar to human RU2S or
             KIAA1154, a ribosomal protein L35A (RPL35A) pseudogene and
             two CpG islands, complete sequence
          Length = 199957

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 40    gaggagctggagagggagg 58
             |||||||||||||||||||
Sbjct: 59000 gaggagctggagagggagg 59018
to top
>gb|AY327900.1| Homo sapiens mixed-lineage protein kinase 1 (MAP3K9) mRNA, complete
           cds
          Length = 5574

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 13  acgaggcggcgggcgagga 31
           |||||||||||||||||||
Sbjct: 188 acgaggcggcgggcgagga 206
to top
>gb|AC073556.11| Oryza sativa chromosome 3 BAC OSJNBa0091P11 genomic sequence, complete
             sequence
          Length = 160738

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 17    ggcggcgggcgaggaggac 35
             |||||||||||||||||||
Sbjct: 74761 ggcggcgggcgaggaggac 74779
to top
>gb|AC183495.1| Brassica oleracea Contig A, complete sequence
          Length = 356505

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 47     tggagagggaggtggccgatctg 69
              ||||||||||| |||||||||||
Sbjct: 286073 tggagagggagatggccgatctg 286051
to top
>gb|DQ399653.1| Nonomuraea longicatena K-252a biosynthesis gene cluster, complete
            sequence
          Length = 20300

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 85   gagcgccgccgtgacgccg 103
            |||||||||||||||||||
Sbjct: 9649 gagcgccgccgtgacgccg 9667
to top
>dbj|AK155677.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F730120L22
           product:mitogen-activated protein kinase kinase kinase
           9, full insert sequence
          Length = 3964

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 13  acgaggcggcgggcgagga 31
           |||||||||||||||||||
Sbjct: 469 acgaggcggcgggcgagga 487
to top
>gb|AC175197.2| Sporobolomyces roseus clone JGIBAIF-21O18, complete sequence
          Length = 35076

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 11    ggacgaggcggcgggcgag 29
             |||||||||||||||||||
Sbjct: 20126 ggacgaggcggcgggcgag 20108
to top
>ref|XM_701539.1| PREDICTED: Danio rerio similar to Tripartite motif protein 3 (RING
           finger protein 22) (RING finger protein HAC1),
           transcript variant 6 (LOC555391), mRNA
          Length = 2247

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 33  gacatctgaggagctggagaggg 55
           ||||| |||||||||||||||||
Sbjct: 621 gacatttgaggagctggagaggg 643
to top
>ref|XM_701538.1| PREDICTED: Danio rerio similar to Tripartite motif protein 3 (RING
           finger protein 22) (RING finger protein HAC1),
           transcript variant 5 (LOC555391), mRNA
          Length = 2214

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 33  gacatctgaggagctggagaggg 55
           ||||| |||||||||||||||||
Sbjct: 588 gacatttgaggagctggagaggg 610
to top
>ref|XM_701537.1| PREDICTED: Danio rerio similar to Tripartite motif protein 3 (RING
           finger protein 22) (RING finger protein HAC1),
           transcript variant 4 (LOC555391), mRNA
          Length = 2034

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 33  gacatctgaggagctggagaggg 55
           ||||| |||||||||||||||||
Sbjct: 621 gacatttgaggagctggagaggg 643
to top
>ref|XM_701536.1| PREDICTED: Danio rerio similar to Tripartite motif protein 3 (RING
           finger protein 22) (RING finger protein HAC1),
           transcript variant 3 (LOC555391), mRNA
          Length = 2265

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 33  gacatctgaggagctggagaggg 55
           ||||| |||||||||||||||||
Sbjct: 621 gacatttgaggagctggagaggg 643
to top
>ref|XM_701535.1| PREDICTED: Danio rerio similar to Tripartite motif protein 3 (RING
           finger protein 22) (RING finger protein HAC1),
           transcript variant 2 (LOC555391), mRNA
          Length = 2301

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 33  gacatctgaggagctggagaggg 55
           ||||| |||||||||||||||||
Sbjct: 621 gacatttgaggagctggagaggg 643
to top
>ref|XM_677589.1| PREDICTED: Danio rerio similar to Tripartite motif protein 3 (RING
           finger protein 22) (RING finger protein HAC1),
           transcript variant 1 (LOC555391), mRNA
          Length = 2307

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 33  gacatctgaggagctggagaggg 55
           ||||| |||||||||||||||||
Sbjct: 621 gacatttgaggagctggagaggg 643
to top
>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 88      cgccgccgtgacgccgccgtccg 110
               ||||||||||||||| |||||||
Sbjct: 3285805 cgccgccgtgacgcccccgtccg 3285783
to top
>emb|BX511060.7| Zebrafish DNA sequence from clone CH211-210L19 in linkage group 10,
            complete sequence
          Length = 139250

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 33   gacatctgaggagctggagaggg 55
            ||||| |||||||||||||||||
Sbjct: 2330 gacatttgaggagctggagaggg 2352
to top
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 6       ggagcggacgaggcggcgg 24
               |||||||||||||||||||
Sbjct: 1028832 ggagcggacgaggcggcgg 1028814
to top
>gb|AC124595.4| Mus musculus BAC clone RP23-18J1 from chromosome 12, complete sequence
          Length = 210781

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 13     acgaggcggcgggcgagga 31
              |||||||||||||||||||
Sbjct: 129134 acgaggcggcgggcgagga 129152
to top
>gb|AC084822.36| Mus musculus strain C57BL/6J clone rp23-47o21 map 16, complete sequence
          Length = 195335

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 35     catctgaggagctggagag 53
              |||||||||||||||||||
Sbjct: 163027 catctgaggagctggagag 163045
to top
>gb|AC008338.7|AC008338 Drosophila melanogaster, chromosome X, region 19C-19E, BAC clone
             BACR30J04, complete sequence
          Length = 177277

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 10    cggacgaggcggcgggcga 28
             |||||||||||||||||||
Sbjct: 62481 cggacgaggcggcgggcga 62499
to top
>tpg|BK000438.1| TPA: TPA_exp: Homo sapiens RING finger protein COP1 gene, complete cds
          Length = 421987

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 43     gagctggagagggaggtgg 61
              |||||||||||||||||||
Sbjct: 330846 gagctggagagggaggtgg 330828
to top
>dbj|AK053843.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched
           library, clone:E130314H24 product:MIXED LINEAGE KINASE
           MLK1 (FRAGMENT) homolog [Homo sapiens], full insert
           sequence
          Length = 3230

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 13  acgaggcggcgggcgagga 31
           |||||||||||||||||||
Sbjct: 304 acgaggcggcgggcgagga 322
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 17      ggcggcgggcgaggaggac 35
               |||||||||||||||||||
Sbjct: 3706727 ggcggcgggcgaggaggac 3706709
to top
>gb|AF251442.1|AF251442 Homo sapiens mixed lineage kinase MLK1 mRNA, partial cds
          Length = 3931

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 13 acgaggcggcgggcgagga 31
          |||||||||||||||||||
Sbjct: 33 acgaggcggcgggcgagga 51
to top
>gb|AC004816.1|AC004816 Homo sapiens PAC clone RP6-65G23 from 14q24.3, complete sequence
          Length = 166200

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 13    acgaggcggcgggcgagga 31
             |||||||||||||||||||
Sbjct: 18389 acgaggcggcgggcgagga 18407
to top
>gb|AC083869.2|AC083869 Homo sapiens chromosome 7 clone RP11-733N14, complete sequence
          Length = 172237

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 40    gaggagctggagagggagg 58
             |||||||||||||||||||
Sbjct: 10737 gaggagctggagagggagg 10755
to top
>gb|AC093576.3| Homo sapiens chromosome 1 clone RP11-359C24, complete sequence
          Length = 185461

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 42    ggagctggagagggaggtg 60
             |||||||||||||||||||
Sbjct: 33285 ggagctggagagggaggtg 33267
to top
>dbj|AP003381.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0692C11
          Length = 169562

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 12    gacgaggcggcgggcgaggagga 34
             |||||||||||||| ||||||||
Sbjct: 55427 gacgaggcggcgggagaggagga 55449
to top
>dbj|AP003023.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0684B02
          Length = 132470

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 12     gacgaggcggcgggcgaggagga 34
              |||||||||||||| ||||||||
Sbjct: 122351 gacgaggcggcgggagaggagga 122373
to top
>gb|AC133487.14| Mus musculus strain C57BL/6J clone rp23-285e22, complete sequence
          Length = 158595

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 35     catctgaggagctggagag 53
              |||||||||||||||||||
Sbjct: 128449 catctgaggagctggagag 128431
to top
>gb|AC009541.16|AC009541 Human Chromosome 7 clone RP11-233L24, complete sequence
          Length = 150467

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 40    gaggagctggagagggagg 58
             |||||||||||||||||||
Sbjct: 97045 gaggagctggagagggagg 97027
to top
>dbj|AP006161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:B1267B06
          Length = 156989

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 6    ggagcggacgaggcggcgg 24
            |||||||||||||||||||
Sbjct: 7904 ggagcggacgaggcggcgg 7886
to top
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 15     gaggcggcgggcgaggagg 33
              |||||||||||||||||||
Sbjct: 943954 gaggcggcgggcgaggagg 943972
to top
>dbj|AP006070.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:B1342F01
          Length = 153287

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 6      ggagcggacgaggcggcgg 24
              |||||||||||||||||||
Sbjct: 145104 ggagcggacgaggcggcgg 145086
to top
>dbj|AP005607.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ9003_D08
          Length = 88854

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 6     ggagcggacgaggcggcgg 24
             |||||||||||||||||||
Sbjct: 70434 ggagcggacgaggcggcgg 70416
to top
>dbj|AP004845.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1233_A01
          Length = 98378

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 6    ggagcggacgaggcggcgg 24
            |||||||||||||||||||
Sbjct: 8998 ggagcggacgaggcggcgg 8980
to top
>dbj|AB124585.1| Lethenteron japonicum LjPitxA mRNA for Pitx homologue, partial
          cds
          Length = 600

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 9  gcggacgaggcggcgggcgagga 31
          ||||||||||||| |||||||||
Sbjct: 30 gcggacgaggcggggggcgagga 52
to top
>gb|AC153531.5| Mus musculus 10 BAC RP23-22C3 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 186219

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 39     tgaggagctggagagggaggtgg 61
              ||||||| |||||||||||||||
Sbjct: 106850 tgaggagatggagagggaggtgg 106828
to top
>dbj|AK105275.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-A04, full
           insert sequence
          Length = 1764

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 6   ggagcggacgaggcggcgg 24
           |||||||||||||||||||
Sbjct: 293 ggagcggacgaggcggcgg 275
to top
>emb|AJ239323.3|HS519N18 Homo sapiens chromosome X sequencefrom PAC RPCI-3 519N18 map Xp11.2,
             complete sequence
          Length = 102853

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 40    gaggagctggagagggagg 58
             |||||||||||||||||||
Sbjct: 22349 gaggagctggagagggagg 22331
to top
>gb|AE003571.4| Drosophila melanogaster chromosome X, section 68 of 74 of the complete
             sequence
          Length = 302538

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 10    cggacgaggcggcgggcga 28
             |||||||||||||||||||
Sbjct: 27778 cggacgaggcggcgggcga 27796
to top
>emb|CT009678.9| Zebrafish DNA sequence from clone CH73-30D3 in linkage group 14,
            complete sequence
          Length = 25578

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 39   tgaggagctggagagggag 57
            |||||||||||||||||||
Sbjct: 2748 tgaggagctggagagggag 2730
to top
>emb|AL590723.13| Human DNA sequence from clone RP11-492I21 on chromosome 1 Contains part
             of the gene for constitutive photomorphogenic protein
             (COP1) and a novel gene, complete sequence
          Length = 178223

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 43    gagctggagagggaggtgg 61
             |||||||||||||||||||
Sbjct: 11724 gagctggagagggaggtgg 11742
to top
>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 15     gaggcggcgggcgaggagg 33
              |||||||||||||||||||
Sbjct: 627088 gaggcggcgggcgaggagg 627106
to top
>ref|NM_177395.3| Mus musculus mitogen-activated protein kinase kinase kinase 9
           (Map3k9), mRNA
          Length = 3225

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 13  acgaggcggcgggcgagga 31
           |||||||||||||||||||
Sbjct: 300 acgaggcggcgggcgagga 318
to top
>emb|AL611986.15| Mouse DNA sequence from clone RP23-74I9 on chromosome 15, complete
             sequence
          Length = 191808

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 35    catctgaggagctggagag 53
             |||||||||||||||||||
Sbjct: 20868 catctgaggagctggagag 20850
to top
>emb|AL606916.4| Mouse DNA sequence from clone RP23-144L24 on chromosome 4, complete
             sequence
          Length = 190214

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 31    aggacatctgaggagctgg 49
             |||||||||||||||||||
Sbjct: 89782 aggacatctgaggagctgg 89764
to top
>emb|AL512721.1|HSM802852 Homo sapiens mRNA; cDNA DKFZp547K042 (from clone DKFZp547K042)
          Length = 1735

 Score = 38.2 bits (19), Expect = 6.7
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 40   gaggagctggagagggagg 58
            |||||||||||||||||||
Sbjct: 1006 gaggagctggagagggagg 1024


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 947,136
Number of Sequences: 3902068
Number of extensions: 947136
Number of successful extensions: 83821
Number of sequences better than 10.0: 99
Number of HSP's better than 10.0 without gapping: 101
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 81717
Number of HSP's gapped (non-prelim): 2104
length of query: 141
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 120
effective length of database: 17,151,101,840
effective search space: 2058132220800
effective search space used: 2058132220800
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
to top